HEADER HYDROLASE 05-MAY-20 6YYI TITLE CRYSTAL STRUCTURE OF BETA-D-XYLOSIDASE FROM DICTYOGLOMUS THERMOPHILUM TITLE 2 BOUND TO BETA-D-XYLOPYRANOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-XYLOSIDASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.2.1.37; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DICTYOGLOMUS THERMOPHILUM H-6-12; SOURCE 3 ORGANISM_TAXID: 309799; SOURCE 4 GENE: DICTH_1792; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: ROSETTA; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS CARBOHYDRATE SUBSTRATE COMPLEX, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR P.LAFITE,R.DANIELLOU,D.BRETAGNE REVDAT 3 24-JAN-24 6YYI 1 REMARK REVDAT 2 09-DEC-20 6YYI 1 JRNL REVDAT 1 02-DEC-20 6YYI 0 JRNL AUTH D.BRETAGNE,A.PARIS,R.DE VAUMAS,P.LAFITE,R.DANIELLOU JRNL TITL CRYSTAL STRUCTURE OF DICTYOGLOMUS THERMOPHILUM JRNL TITL 2 BETA-D-XYLOSIDASE DTXYL UNRAVELS THE STRUCTURAL DETERMINANTS JRNL TITL 3 FOR EFFICIENT NOTOGINSENOSIDE R1 HYDROLYSIS. JRNL REF BIOCHIMIE V. 181 34 2020 JRNL REFN ISSN 0300-9084 JRNL PMID 33242495 JRNL DOI 10.1016/J.BIOCHI.2020.11.017 REMARK 2 REMARK 2 RESOLUTION. 2.67 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.67 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.57 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 43866 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2192 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.5700 - 6.7400 1.00 2748 143 0.1571 0.1723 REMARK 3 2 6.7300 - 5.3500 1.00 2654 140 0.1626 0.2011 REMARK 3 3 5.3500 - 4.6700 1.00 2631 139 0.1351 0.1719 REMARK 3 4 4.6700 - 4.2500 1.00 2625 138 0.1256 0.1758 REMARK 3 5 4.2500 - 3.9400 1.00 2619 137 0.1553 0.1869 REMARK 3 6 3.9400 - 3.7100 1.00 2604 137 0.1646 0.2348 REMARK 3 7 3.7100 - 3.5200 1.00 2607 137 0.1960 0.2422 REMARK 3 8 3.5200 - 3.3700 1.00 2587 136 0.2054 0.2697 REMARK 3 9 3.3700 - 3.2400 1.00 2576 136 0.2043 0.2891 REMARK 3 10 3.2400 - 3.1300 1.00 2598 137 0.2112 0.2657 REMARK 3 11 3.1300 - 3.0300 1.00 2602 137 0.2321 0.3146 REMARK 3 12 3.0300 - 2.9400 1.00 2561 134 0.2339 0.3061 REMARK 3 13 2.9400 - 2.8700 1.00 2613 138 0.2387 0.3024 REMARK 3 14 2.8700 - 2.8000 1.00 2590 136 0.2445 0.3384 REMARK 3 15 2.8000 - 2.7300 1.00 2543 134 0.2467 0.3468 REMARK 3 16 2.7300 - 2.6700 0.97 2516 133 0.2816 0.3143 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.630 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 53.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6YYI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-MAY-20. REMARK 100 THE DEPOSITION ID IS D_1292107894. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-MAR-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43883 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.670 REMARK 200 RESOLUTION RANGE LOW (A) : 48.570 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 20.76 REMARK 200 R MERGE (I) : 0.17200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.1700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.67 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 20.29 REMARK 200 R MERGE FOR SHELL (I) : 1.13800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.710 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: 1PX8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M AMMONIUM SULFATE 10% PEG 4000 REMARK 280 0,1M SODIUM CITRATE PH 5.6, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 34.54333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 69.08667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 69.08667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 34.54333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 GLY A -20 REMARK 465 SER A -19 REMARK 465 SER A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 SER A -11 REMARK 465 SER A -10 REMARK 465 GLY A -9 REMARK 465 LEU A -8 REMARK 465 VAL A -7 REMARK 465 PRO A -6 REMARK 465 ARG A -5 REMARK 465 GLY A -4 REMARK 465 SER A -3 REMARK 465 HIS A -2 REMARK 465 MET A -1 REMARK 465 ALA A 0 REMARK 465 MET B -21 REMARK 465 GLY B -20 REMARK 465 SER B -19 REMARK 465 SER B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 SER B -11 REMARK 465 SER B -10 REMARK 465 GLY B -9 REMARK 465 LEU B -8 REMARK 465 VAL B -7 REMARK 465 PRO B -6 REMARK 465 ARG B -5 REMARK 465 GLY B -4 REMARK 465 SER B -3 REMARK 465 HIS B -2 REMARK 465 MET B -1 REMARK 465 ALA B 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 5 CG CD CE NZ REMARK 470 ILE A 69 CD1 REMARK 470 ILE A 289 CD1 REMARK 470 GLU A 460 CD OE1 OE2 REMARK 470 ASN A 461 OD1 ND2 REMARK 470 VAL B 14 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 2 87.90 31.62 REMARK 500 VAL A 12 -121.20 -118.48 REMARK 500 ASP A 71 -138.01 78.16 REMARK 500 PHE A 103 -131.20 -88.89 REMARK 500 PHE A 116 166.93 68.04 REMARK 500 TRP A 159 -165.54 64.35 REMARK 500 TRP A 168 121.22 -172.46 REMARK 500 ASN A 191 116.01 -160.89 REMARK 500 SER A 205 38.27 -142.55 REMARK 500 PRO A 268 -9.03 -59.55 REMARK 500 ASN A 280 -178.72 -177.02 REMARK 500 SER A 281 -90.22 -80.68 REMARK 500 PHE A 322 144.93 -170.25 REMARK 500 GLU A 323 10.34 -143.46 REMARK 500 ASP A 326 173.38 69.39 REMARK 500 HIS A 333 11.71 -151.31 REMARK 500 TYR A 364 136.34 -172.25 REMARK 500 ASN A 385 80.48 -156.37 REMARK 500 GLU A 391 -103.58 -79.46 REMARK 500 GLU A 392 -83.74 54.92 REMARK 500 ASN A 393 124.91 139.80 REMARK 500 ASP A 417 -149.12 -149.43 REMARK 500 ASN A 422 72.72 -119.32 REMARK 500 ASN A 461 36.41 70.83 REMARK 500 ASP B 71 -123.58 68.00 REMARK 500 PHE B 103 -140.33 -91.71 REMARK 500 PHE B 116 173.06 73.63 REMARK 500 PHE B 142 -65.62 108.96 REMARK 500 TRP B 159 -166.71 81.05 REMARK 500 SER B 205 42.35 -145.62 REMARK 500 ASN B 220 42.25 -109.62 REMARK 500 ASN B 280 167.03 175.05 REMARK 500 SER B 281 -94.48 -66.56 REMARK 500 VAL B 321 101.62 -51.56 REMARK 500 ASP B 326 -175.18 70.43 REMARK 500 ARG B 365 125.75 -173.11 REMARK 500 ASP B 366 -166.09 -124.09 REMARK 500 ASN B 385 80.24 -161.39 REMARK 500 ASP B 417 -152.07 -152.47 REMARK 500 ASN B 422 71.71 -117.01 REMARK 500 REMARK 500 REMARK: NULL DBREF 6YYI A 2 502 UNP B5YB78 B5YB78_DICT6 2 502 DBREF 6YYI B 2 502 UNP B5YB78 B5YB78_DICT6 2 502 SEQADV 6YYI MET A -21 UNP B5YB78 INITIATING METHIONINE SEQADV 6YYI GLY A -20 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI SER A -19 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI SER A -18 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI HIS A -17 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI HIS A -16 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI HIS A -15 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI HIS A -14 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI HIS A -13 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI HIS A -12 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI SER A -11 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI SER A -10 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI GLY A -9 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI LEU A -8 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI VAL A -7 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI PRO A -6 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI ARG A -5 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI GLY A -4 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI SER A -3 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI HIS A -2 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI MET A -1 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI ALA A 0 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI MET A 1 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI MET B -21 UNP B5YB78 INITIATING METHIONINE SEQADV 6YYI GLY B -20 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI SER B -19 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI SER B -18 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI HIS B -17 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI HIS B -16 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI HIS B -15 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI HIS B -14 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI HIS B -13 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI HIS B -12 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI SER B -11 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI SER B -10 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI GLY B -9 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI LEU B -8 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI VAL B -7 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI PRO B -6 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI ARG B -5 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI GLY B -4 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI SER B -3 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI HIS B -2 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI MET B -1 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI ALA B 0 UNP B5YB78 EXPRESSION TAG SEQADV 6YYI MET B 1 UNP B5YB78 EXPRESSION TAG SEQRES 1 A 524 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 524 LEU VAL PRO ARG GLY SER HIS MET ALA MET ASN HIS ILE SEQRES 3 A 524 LYS ILE GLU LYS GLY LYS TYR VAL GLY VAL PHE PRO ASP SEQRES 4 A 524 ASN TRP LYS PHE CYS VAL GLY SER GLY ARG ILE GLY LEU SEQRES 5 A 524 ALA LEU GLN LYS GLU TYR ILE ASP ALA LEU SER PHE VAL SEQRES 6 A 524 LYS ARG HIS ILE ASP PHE LYS TYR LEU ARG ALA HIS GLY SEQRES 7 A 524 LEU LEU HIS ASP ASP VAL GLY ILE TYR ARG GLU ASP ILE SEQRES 8 A 524 VAL ASP GLY LYS THR ILE PRO PHE TYR ASN PHE THR TYR SEQRES 9 A 524 ILE ASP ARG ILE TYR ASP SER PHE LEU GLU ILE GLY ILE SEQRES 10 A 524 ARG PRO PHE VAL GLU ILE GLY PHE MET PRO SER LYS LEU SEQRES 11 A 524 ALA SER GLY ASP GLN THR VAL PHE TYR TRP ARG GLY ASN SEQRES 12 A 524 VAL THR PRO PRO LYS ASP TYR LYS GLU TRP GLU LYS LEU SEQRES 13 A 524 ILE LYS ASN VAL VAL LYS HIS PHE ILE ASP ARG TYR GLY SEQRES 14 A 524 GLU LYS GLU VAL THR GLN TRP PRO PHE GLU ILE TRP ASN SEQRES 15 A 524 GLU PRO ASN LEU THR VAL PHE TRP LYS ASP ALA ASN GLN SEQRES 16 A 524 ALA GLU TYR PHE LYS LEU TYR GLU VAL THR VAL LYS ALA SEQRES 17 A 524 ILE LYS GLU VAL ASN GLU ASN ILE LYS VAL GLY GLY PRO SEQRES 18 A 524 ALA ILE CYS GLY GLY SER ASP TYR TRP ILE THR ASP PHE SEQRES 19 A 524 LEU ASN PHE CYS TYR LYS ASN ASN VAL PRO VAL ASP PHE SEQRES 20 A 524 LEU THR ARG HIS ALA TYR THR GLY LYS PRO PRO ILE TYR SEQRES 21 A 524 THR PRO HIS PHE VAL TYR GLN ASP VAL HIS PRO ILE GLU SEQRES 22 A 524 TYR MET LEU ASN GLU PHE LYS THR VAL ARG GLU MET VAL SEQRES 23 A 524 LYS ASN SER PRO PHE PRO ASN LEU PRO ILE HIS ILE THR SEQRES 24 A 524 GLU PHE ASN SER SER TYR HIS PRO LEU CYS PRO ILE HIS SEQRES 25 A 524 ASP THR PRO PHE ASN ALA ALA TYR LEU ALA ARG VAL LEU SEQRES 26 A 524 SER GLU GLY GLY ASP TYR VAL ASP SER PHE SER TYR TRP SEQRES 27 A 524 THR PHE SER ASP VAL PHE GLU GLU ALA ASP VAL PRO ARG SEQRES 28 A 524 SER LEU PHE HIS GLY GLY PHE GLY LEU VAL ALA PHE HIS SEQRES 29 A 524 ASN ILE PRO LYS PRO VAL PHE HIS MET PHE THR PHE PHE SEQRES 30 A 524 ASN ALA MET GLY GLU LYS ILE LEU TYR ARG ASP ASP HIS SEQRES 31 A 524 ILE LEU ILE THR GLU ARG GLU ASP LYS SER VAL ALA LEU SEQRES 32 A 524 ILE ALA TRP ASN GLU VAL MET THR LYS GLU GLU ASN GLN SEQRES 33 A 524 GLU ARG LYS TYR ARG ILE GLU ILE PRO VAL ASP TYR LYS SEQRES 34 A 524 GLU VAL PHE ILE LYS GLN LYS LEU ILE ASP GLU GLU TYR SEQRES 35 A 524 GLY ASN PRO TRP ARG THR TRP ILE GLN MET GLY ARG PRO SEQRES 36 A 524 ARG PHE PRO SER LYS LYS GLN ILE GLU THR LEU ARG GLU SEQRES 37 A 524 VAL ALA THR PRO LYS VAL THR THR PHE ARG LYS THR VAL SEQRES 38 A 524 GLU ASN GLY HIS ILE THR LEU GLU PHE THR LEU GLY LYS SEQRES 39 A 524 ASN ALA VAL THR LEU PHE GLU ILE SER LYS VAL ILE ASP SEQRES 40 A 524 GLU SER HIS THR TYR ILE GLY LEU ASP ASP SER LYS ILE SEQRES 41 A 524 PRO GLY GLY TYR SEQRES 1 B 524 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 524 LEU VAL PRO ARG GLY SER HIS MET ALA MET ASN HIS ILE SEQRES 3 B 524 LYS ILE GLU LYS GLY LYS TYR VAL GLY VAL PHE PRO ASP SEQRES 4 B 524 ASN TRP LYS PHE CYS VAL GLY SER GLY ARG ILE GLY LEU SEQRES 5 B 524 ALA LEU GLN LYS GLU TYR ILE ASP ALA LEU SER PHE VAL SEQRES 6 B 524 LYS ARG HIS ILE ASP PHE LYS TYR LEU ARG ALA HIS GLY SEQRES 7 B 524 LEU LEU HIS ASP ASP VAL GLY ILE TYR ARG GLU ASP ILE SEQRES 8 B 524 VAL ASP GLY LYS THR ILE PRO PHE TYR ASN PHE THR TYR SEQRES 9 B 524 ILE ASP ARG ILE TYR ASP SER PHE LEU GLU ILE GLY ILE SEQRES 10 B 524 ARG PRO PHE VAL GLU ILE GLY PHE MET PRO SER LYS LEU SEQRES 11 B 524 ALA SER GLY ASP GLN THR VAL PHE TYR TRP ARG GLY ASN SEQRES 12 B 524 VAL THR PRO PRO LYS ASP TYR LYS GLU TRP GLU LYS LEU SEQRES 13 B 524 ILE LYS ASN VAL VAL LYS HIS PHE ILE ASP ARG TYR GLY SEQRES 14 B 524 GLU LYS GLU VAL THR GLN TRP PRO PHE GLU ILE TRP ASN SEQRES 15 B 524 GLU PRO ASN LEU THR VAL PHE TRP LYS ASP ALA ASN GLN SEQRES 16 B 524 ALA GLU TYR PHE LYS LEU TYR GLU VAL THR VAL LYS ALA SEQRES 17 B 524 ILE LYS GLU VAL ASN GLU ASN ILE LYS VAL GLY GLY PRO SEQRES 18 B 524 ALA ILE CYS GLY GLY SER ASP TYR TRP ILE THR ASP PHE SEQRES 19 B 524 LEU ASN PHE CYS TYR LYS ASN ASN VAL PRO VAL ASP PHE SEQRES 20 B 524 LEU THR ARG HIS ALA TYR THR GLY LYS PRO PRO ILE TYR SEQRES 21 B 524 THR PRO HIS PHE VAL TYR GLN ASP VAL HIS PRO ILE GLU SEQRES 22 B 524 TYR MET LEU ASN GLU PHE LYS THR VAL ARG GLU MET VAL SEQRES 23 B 524 LYS ASN SER PRO PHE PRO ASN LEU PRO ILE HIS ILE THR SEQRES 24 B 524 GLU PHE ASN SER SER TYR HIS PRO LEU CYS PRO ILE HIS SEQRES 25 B 524 ASP THR PRO PHE ASN ALA ALA TYR LEU ALA ARG VAL LEU SEQRES 26 B 524 SER GLU GLY GLY ASP TYR VAL ASP SER PHE SER TYR TRP SEQRES 27 B 524 THR PHE SER ASP VAL PHE GLU GLU ALA ASP VAL PRO ARG SEQRES 28 B 524 SER LEU PHE HIS GLY GLY PHE GLY LEU VAL ALA PHE HIS SEQRES 29 B 524 ASN ILE PRO LYS PRO VAL PHE HIS MET PHE THR PHE PHE SEQRES 30 B 524 ASN ALA MET GLY GLU LYS ILE LEU TYR ARG ASP ASP HIS SEQRES 31 B 524 ILE LEU ILE THR GLU ARG GLU ASP LYS SER VAL ALA LEU SEQRES 32 B 524 ILE ALA TRP ASN GLU VAL MET THR LYS GLU GLU ASN GLN SEQRES 33 B 524 GLU ARG LYS TYR ARG ILE GLU ILE PRO VAL ASP TYR LYS SEQRES 34 B 524 GLU VAL PHE ILE LYS GLN LYS LEU ILE ASP GLU GLU TYR SEQRES 35 B 524 GLY ASN PRO TRP ARG THR TRP ILE GLN MET GLY ARG PRO SEQRES 36 B 524 ARG PHE PRO SER LYS LYS GLN ILE GLU THR LEU ARG GLU SEQRES 37 B 524 VAL ALA THR PRO LYS VAL THR THR PHE ARG LYS THR VAL SEQRES 38 B 524 GLU ASN GLY HIS ILE THR LEU GLU PHE THR LEU GLY LYS SEQRES 39 B 524 ASN ALA VAL THR LEU PHE GLU ILE SER LYS VAL ILE ASP SEQRES 40 B 524 GLU SER HIS THR TYR ILE GLY LEU ASP ASP SER LYS ILE SEQRES 41 B 524 PRO GLY GLY TYR HET EDO A 701 4 HET EDO A 702 4 HET EDO A 703 4 HET EDO A 704 4 HET CIT A 705 13 HET EDO A 706 4 HET EDO A 707 4 HET EDO A 708 4 HET SO4 A 709 5 HET EDO B 701 4 HET EDO B 702 4 HET EDO B 703 4 HET EDO B 704 4 HET XYP B 705 10 HET EDO B 706 4 HET SO4 B 707 5 HET NA B 708 1 HET NA B 709 1 HETNAM EDO 1,2-ETHANEDIOL HETNAM CIT CITRIC ACID HETNAM SO4 SULFATE ION HETNAM XYP BETA-D-XYLOPYRANOSE HETNAM NA SODIUM ION HETSYN EDO ETHYLENE GLYCOL HETSYN XYP BETA-D-XYLOSE; D-XYLOSE; XYLOSE FORMUL 3 EDO 12(C2 H6 O2) FORMUL 7 CIT C6 H8 O7 FORMUL 11 SO4 2(O4 S 2-) FORMUL 16 XYP C5 H10 O5 FORMUL 19 NA 2(NA 1+) FORMUL 21 HOH *75(H2 O) HELIX 1 AA1 ASP A 17 LYS A 20 5 4 HELIX 2 AA2 ARG A 27 LEU A 32 5 6 HELIX 3 AA3 GLN A 33 ARG A 45 1 13 HELIX 4 AA4 PHE A 80 GLY A 94 1 15 HELIX 5 AA5 PRO A 105 ALA A 109 5 5 HELIX 6 AA6 ASP A 127 GLY A 147 1 21 HELIX 7 AA7 GLY A 147 THR A 152 1 6 HELIX 8 AA8 LEU A 164 ALA A 171 5 8 HELIX 9 AA9 ASN A 172 ASN A 191 1 20 HELIX 10 AB1 ASP A 206 ASN A 220 1 15 HELIX 11 AB2 ILE A 250 ASN A 266 1 17 HELIX 12 AB3 CYS A 287 ASP A 291 5 5 HELIX 13 AB4 THR A 292 GLY A 306 1 15 HELIX 14 AB5 GLY A 307 TYR A 309 5 3 HELIX 15 AB6 LYS A 346 PHE A 355 1 10 HELIX 16 AB7 ASN A 356 MET A 358 5 3 HELIX 17 AB8 ASN A 422 MET A 430 1 9 HELIX 18 AB9 SER A 437 ALA A 448 1 12 HELIX 19 AC1 GLU A 486 TYR A 490 5 5 HELIX 20 AC2 ASP A 494 ILE A 498 5 5 HELIX 21 AC3 PRO B 16 LYS B 20 5 5 HELIX 22 AC4 ARG B 27 LEU B 32 5 6 HELIX 23 AC5 GLN B 33 ARG B 45 1 13 HELIX 24 AC6 PHE B 80 GLY B 94 1 15 HELIX 25 AC7 PRO B 105 ALA B 109 5 5 HELIX 26 AC8 ASP B 127 GLY B 147 1 21 HELIX 27 AC9 GLY B 147 THR B 152 1 6 HELIX 28 AD1 TRP B 168 ALA B 171 5 4 HELIX 29 AD2 ASN B 172 ASN B 191 1 20 HELIX 30 AD3 ASP B 206 ASN B 219 1 14 HELIX 31 AD4 ILE B 250 ASN B 266 1 17 HELIX 32 AD5 CYS B 287 ASP B 291 5 5 HELIX 33 AD6 THR B 292 GLY B 306 1 15 HELIX 34 AD7 GLY B 307 TYR B 309 5 3 HELIX 35 AD8 PHE B 341 ASN B 343 5 3 HELIX 36 AD9 LYS B 346 PHE B 355 1 10 HELIX 37 AE1 ASN B 356 MET B 358 5 3 HELIX 38 AE2 ASN B 422 MET B 430 1 9 HELIX 39 AE3 SER B 437 ALA B 448 1 12 HELIX 40 AE4 GLU B 486 TYR B 490 5 5 HELIX 41 AE5 ASP B 494 ILE B 498 5 5 SHEET 1 AA1 3 HIS A 3 LYS A 5 0 SHEET 2 AA1 3 ARG A 396 PRO A 403 1 O GLU A 401 N ILE A 4 SHEET 3 AA1 3 HIS A 463 LEU A 470 -1 O LEU A 470 N ARG A 396 SHEET 1 AA2 9 CYS A 22 GLY A 24 0 SHEET 2 AA2 9 TYR A 51 ARG A 53 1 O ARG A 53 N VAL A 23 SHEET 3 AA2 9 ARG A 96 ILE A 101 1 O PHE A 98 N LEU A 52 SHEET 4 AA2 9 PHE A 156 ILE A 158 1 O GLU A 157 N VAL A 99 SHEET 5 AA2 9 VAL A 196 ILE A 201 1 O GLY A 197 N ILE A 158 SHEET 6 AA2 9 PHE A 225 ALA A 230 1 O HIS A 229 N ILE A 201 SHEET 7 AA2 9 ILE A 274 PHE A 279 1 O HIS A 275 N LEU A 226 SHEET 8 AA2 9 SER A 312 TYR A 315 1 O SER A 312 N ILE A 276 SHEET 9 AA2 9 CYS A 22 GLY A 24 1 N GLY A 24 O TYR A 315 SHEET 1 AA3 2 TYR A 65 ILE A 69 0 SHEET 2 AA3 2 THR A 74 TYR A 78 -1 O PHE A 77 N ARG A 66 SHEET 1 AA4 2 THR A 114 VAL A 115 0 SHEET 2 AA4 2 GLY A 120 ASN A 121 -1 O GLY A 120 N VAL A 115 SHEET 1 AA5 2 ILE A 237 TYR A 238 0 SHEET 2 AA5 2 VAL A 243 TYR A 244 -1 O TYR A 244 N ILE A 237 SHEET 1 AA6 2 VAL A 339 ALA A 340 0 SHEET 2 AA6 2 ILE A 344 PRO A 345 -1 O ILE A 344 N ALA A 340 SHEET 1 AA7 6 LYS A 361 ASP A 366 0 SHEET 2 AA7 6 ILE A 369 GLU A 373 -1 O ILE A 371 N LEU A 363 SHEET 3 AA7 6 VAL A 379 ASN A 385 -1 O ALA A 380 N THR A 372 SHEET 4 AA7 6 ALA A 474 LYS A 482 -1 O ILE A 480 N VAL A 379 SHEET 5 AA7 6 GLU A 408 ILE A 416 -1 N ILE A 416 O VAL A 475 SHEET 6 AA7 6 LYS A 451 THR A 458 -1 O LYS A 451 N LEU A 415 SHEET 1 AA8 3 ASN B 2 LYS B 5 0 SHEET 2 AA8 3 ARG B 396 PRO B 403 1 O GLU B 401 N ILE B 4 SHEET 3 AA8 3 HIS B 463 LEU B 470 -1 O LEU B 466 N ILE B 400 SHEET 1 AA9 7 GLY B 13 VAL B 14 0 SHEET 2 AA9 7 LYS B 361 ASP B 366 -1 O ILE B 362 N GLY B 13 SHEET 3 AA9 7 ILE B 369 GLU B 373 -1 O ILE B 371 N TYR B 364 SHEET 4 AA9 7 VAL B 379 TRP B 384 -1 O ALA B 380 N THR B 372 SHEET 5 AA9 7 VAL B 475 LYS B 482 -1 O ILE B 480 N VAL B 379 SHEET 6 AA9 7 GLU B 408 ILE B 416 -1 N PHE B 410 O SER B 481 SHEET 7 AA9 7 LYS B 451 THR B 458 -1 O PHE B 455 N ILE B 411 SHEET 1 AB1 9 CYS B 22 SER B 25 0 SHEET 2 AB1 9 TYR B 51 ALA B 54 1 O ARG B 53 N VAL B 23 SHEET 3 AB1 9 ARG B 96 ILE B 101 1 O PHE B 98 N LEU B 52 SHEET 4 AB1 9 PHE B 156 ILE B 158 1 O GLU B 157 N VAL B 99 SHEET 5 AB1 9 VAL B 196 CYS B 202 1 O GLY B 197 N ILE B 158 SHEET 6 AB1 9 PHE B 225 TYR B 231 1 O HIS B 229 N ILE B 201 SHEET 7 AB1 9 ILE B 274 ASN B 280 1 O HIS B 275 N LEU B 226 SHEET 8 AB1 9 SER B 312 TYR B 315 1 O SER B 312 N ILE B 276 SHEET 9 AB1 9 CYS B 22 SER B 25 1 N GLY B 24 O TYR B 315 SHEET 1 AB2 2 TYR B 65 VAL B 70 0 SHEET 2 AB2 2 LYS B 73 TYR B 78 -1 O PHE B 77 N ARG B 66 SHEET 1 AB3 2 THR B 114 VAL B 115 0 SHEET 2 AB3 2 GLY B 120 ASN B 121 -1 O GLY B 120 N VAL B 115 SHEET 1 AB4 2 ILE B 237 TYR B 238 0 SHEET 2 AB4 2 VAL B 243 TYR B 244 -1 O TYR B 244 N ILE B 237 SHEET 1 AB5 2 VAL B 339 ALA B 340 0 SHEET 2 AB5 2 ILE B 344 PRO B 345 -1 O ILE B 344 N ALA B 340 CISPEP 1 GLY A 102 PHE A 103 0 -7.53 CISPEP 2 GLY A 198 PRO A 199 0 1.39 CISPEP 3 TRP A 316 THR A 317 0 17.16 CISPEP 4 GLY B 102 PHE B 103 0 -14.11 CISPEP 5 GLY B 198 PRO B 199 0 -2.35 CISPEP 6 TRP B 316 THR B 317 0 8.78 CRYST1 160.950 160.950 103.630 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006213 0.003587 0.000000 0.00000 SCALE2 0.000000 0.007174 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009650 0.00000