HEADER HYDROLASE 15-MAY-20 6Z2D TITLE CRYSTAL STRUCTURE OF WILD TYPE OGPA FROM AKKERMANSIA MUCINIPHILA IN P TITLE 2 41 21 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: O-GLYCAN PROTEASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AKKERMANSIA MUCINIPHILA ATCC BAA-835; SOURCE 3 ORGANISM_TAXID: 349741; SOURCE 4 GENE: AMUC_1119; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS O-GLYCAN ENDOPEPTIDASE, MUCINS, OGPA. METALLOPROTEASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR B.TRASTOY,A.NAEGALI,I.ANSO,J.SJOGREN,M.E.GUERIN REVDAT 4 19-JUN-24 6Z2D 1 REMARK REVDAT 3 10-NOV-21 6Z2D 1 JRNL REVDAT 2 03-NOV-21 6Z2D 1 JRNL REMARK REVDAT 1 30-SEP-20 6Z2D 0 JRNL AUTH B.TRASTOY,A.NAEGELI,I.ANSO,J.SJOGREN,M.E.GUERIN JRNL TITL STRUCTURAL BASIS OF MAMMALIAN MUCIN PROCESSING BY THE HUMAN JRNL TITL 2 GUT O-GLYCOPEPTIDASE OGPA FROM AKKERMANSIA MUCINIPHILA. JRNL REF NAT COMMUN V. 11 4844 2020 JRNL REFN ESSN 2041-1723 JRNL PMID 32973204 JRNL DOI 10.1038/S41467-020-18696-Y REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.02 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 32348 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 1638 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.0240 - 4.3431 1.00 2810 150 0.1710 0.2103 REMARK 3 2 4.3431 - 3.4490 1.00 2658 136 0.1698 0.1786 REMARK 3 3 3.4490 - 3.0136 1.00 2606 138 0.1892 0.2033 REMARK 3 4 3.0136 - 2.7383 1.00 2562 149 0.2019 0.2275 REMARK 3 5 2.7383 - 2.5421 1.00 2567 127 0.1953 0.2551 REMARK 3 6 2.5421 - 2.3923 1.00 2546 147 0.2037 0.2508 REMARK 3 7 2.3923 - 2.2726 1.00 2539 156 0.1976 0.2295 REMARK 3 8 2.2726 - 2.1737 1.00 2525 124 0.1990 0.2389 REMARK 3 9 2.1737 - 2.0900 1.00 2519 132 0.1972 0.2445 REMARK 3 10 2.0900 - 2.0179 1.00 2547 138 0.2140 0.2813 REMARK 3 11 2.0179 - 1.9548 1.00 2527 132 0.2178 0.2624 REMARK 3 12 1.9548 - 1.8990 0.91 2304 109 0.2612 0.3250 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.540 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.11 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.47 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6Z2D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-MAY-20. REMARK 100 THE DEPOSITION ID IS D_1292108747. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-MAY-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.968820 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32350 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.899 REMARK 200 RESOLUTION RANGE LOW (A) : 29.024 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 24.90 REMARK 200 R MERGE (I) : 0.09230 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 26.9500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 21.10 REMARK 200 R MERGE FOR SHELL (I) : 0.84000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: CRANK2 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM SODIUM HEPES/MOPS PH 7.5, 100 REMARK 280 MM CARBOXYLIC ACIDS MIXTURE (SODIUM FORMATE, AMMONIUM ACETATE, REMARK 280 SODIUM CITRATE TRIBASIC DIHYDRATE, SODIUM POTASSIUM TARTRATE REMARK 280 TETRAHYDRATE AND SODIUM OXAMATE), 20% PEG 500 MME AND 10% PEG REMARK 280 20000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 93.71300 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 32.43050 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 32.43050 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 46.85650 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 32.43050 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 32.43050 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 140.56950 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 32.43050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 32.43050 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 46.85650 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 32.43050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 32.43050 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 140.56950 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 93.71300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -55.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 25 REMARK 465 VAL A 26 REMARK 465 ASP A 381 REMARK 465 GLY A 382 REMARK 465 SER A 383 REMARK 465 LYS A 384 REMARK 465 SER A 385 REMARK 465 GLY A 386 REMARK 465 SER A 387 REMARK 465 GLY A 388 REMARK 465 HIS A 389 REMARK 465 HIS A 390 REMARK 465 HIS A 391 REMARK 465 HIS A 392 REMARK 465 HIS A 393 REMARK 465 HIS A 394 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 33 CG CD CE NZ REMARK 470 GLU A 117 CG CD OE1 OE2 REMARK 470 ASN A 118 CG OD1 ND2 REMARK 470 TRP A 122 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 122 CZ3 CH2 REMARK 470 LYS A 123 CG CD CE NZ REMARK 470 GLN A 126 CG CD OE1 NE2 REMARK 470 GLU A 130 CG CD OE1 OE2 REMARK 470 LYS A 133 CG CD CE NZ REMARK 470 LYS A 189 CG CD CE NZ REMARK 470 ARG A 191 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 269 CG CD OE1 OE2 REMARK 470 LYS A 271 CG CD CE NZ REMARK 470 GLU A 275 CG CD OE1 OE2 REMARK 470 VAL A 314 CG1 CG2 REMARK 470 LYS A 333 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 135 55.54 -145.72 REMARK 500 ASP A 153 -150.60 -141.68 REMARK 500 ASN A 160 72.20 -151.85 REMARK 500 PHE A 166 81.30 -157.75 REMARK 500 ASN A 212 17.50 82.96 REMARK 500 LEU A 327 -82.38 -104.79 REMARK 500 ASN A 347 20.21 -146.44 REMARK 500 ALA A 375 57.81 -151.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 408 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 205 NE2 REMARK 620 2 HIS A 209 NE2 94.1 REMARK 620 3 HIS A 215 NE2 104.0 94.2 REMARK 620 4 HOH A 509 O 99.3 161.3 95.2 REMARK 620 5 HOH A 609 O 96.7 100.3 153.7 65.3 REMARK 620 6 HOH A 632 O 161.8 93.4 92.0 70.1 65.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 407 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 308 OE1 REMARK 620 2 ASP A 309 O 91.5 REMARK 620 3 PRO A 311 O 95.9 82.4 REMARK 620 4 GLN A 316 O 103.6 156.2 78.0 REMARK 620 5 ASP A 319 OD1 95.0 114.8 159.4 82.5 REMARK 620 6 HOH A 588 O 167.2 81.0 93.4 87.0 78.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 408 DBREF 6Z2D A 25 385 UNP B2UR60 B2UR60_AKKM8 25 385 SEQADV 6Z2D GLY A 386 UNP B2UR60 EXPRESSION TAG SEQADV 6Z2D SER A 387 UNP B2UR60 EXPRESSION TAG SEQADV 6Z2D GLY A 388 UNP B2UR60 EXPRESSION TAG SEQADV 6Z2D HIS A 389 UNP B2UR60 EXPRESSION TAG SEQADV 6Z2D HIS A 390 UNP B2UR60 EXPRESSION TAG SEQADV 6Z2D HIS A 391 UNP B2UR60 EXPRESSION TAG SEQADV 6Z2D HIS A 392 UNP B2UR60 EXPRESSION TAG SEQADV 6Z2D HIS A 393 UNP B2UR60 EXPRESSION TAG SEQADV 6Z2D HIS A 394 UNP B2UR60 EXPRESSION TAG SEQRES 1 A 370 GLU VAL THR VAL PRO ASP ALA LEU LYS ASP ARG ILE ALA SEQRES 2 A 370 LEU LYS LYS THR ALA ARG GLN LEU ASN ILE VAL TYR PHE SEQRES 3 A 370 LEU GLY SER ASP THR GLU PRO VAL PRO ASP TYR GLU ARG SEQRES 4 A 370 ARG LEU SER GLU LEU LEU LEU TYR LEU GLN GLN PHE TYR SEQRES 5 A 370 GLY LYS GLU MET GLN ARG HIS GLY TYR GLY ALA ARG SER SEQRES 6 A 370 PHE GLY LEU ASP ILE LYS SER PRO GLY ARG VAL ASN ILE SEQRES 7 A 370 ILE GLU TYR LYS ALA LYS ASN PRO ALA ALA HIS TYR PRO SEQRES 8 A 370 TYR GLU ASN GLY GLY GLY TRP LYS ALA ALA GLN GLU LEU SEQRES 9 A 370 ASP GLU PHE PHE LYS ALA HIS PRO ASP ARG LYS LYS SER SEQRES 10 A 370 GLN HIS THR LEU ILE ILE MET PRO THR TRP ASN ASP GLU SEQRES 11 A 370 LYS ASN GLY PRO ASP ASN PRO GLY GLY VAL PRO PHE TYR SEQRES 12 A 370 GLY MET GLY ARG ASN CYS PHE ALA LEU ASP TYR PRO ALA SEQRES 13 A 370 PHE ASP ILE LYS HIS LEU GLY GLN LYS THR ARG GLU GLY SEQRES 14 A 370 ARG LEU LEU THR LYS TRP TYR GLY GLY MET ALA HIS GLU SEQRES 15 A 370 LEU GLY HIS GLY LEU ASN LEU PRO HIS ASN HIS GLN THR SEQRES 16 A 370 ALA SER ASP GLY LYS LYS TYR GLY THR ALA LEU MET GLY SEQRES 17 A 370 SER GLY ASN TYR THR PHE GLY THR SER PRO THR PHE LEU SEQRES 18 A 370 THR PRO ALA SER CYS ALA LEU LEU ASP ALA CYS GLU VAL SEQRES 19 A 370 PHE SER VAL THR PRO SER GLN GLN PHE TYR GLU GLY LYS SEQRES 20 A 370 PRO GLU VAL GLU VAL GLY ASP VAL ALA ILE SER PHE LYS SEQRES 21 A 370 GLY ASP GLN ILE LEU VAL SER GLY ASN TYR LYS SER PRO SEQRES 22 A 370 GLN THR VAL LYS ALA LEU ASN VAL TYR ILE GLN ASP PRO SEQRES 23 A 370 PRO TYR ALA VAL ASN GLN ASP TYR ASP ALA VAL SER PHE SEQRES 24 A 370 SER ARG ARG LEU GLY LYS LYS SER GLY LYS PHE SER MET SEQRES 25 A 370 LYS ILE ASP LYS LYS GLU LEU GLU GLY LEU ASN ASN ASN SEQRES 26 A 370 GLU PHE ARG ILE SER LEU MET PHE ILE LEU ALA ASN GLY SEQRES 27 A 370 LEU HIS MET GLN LYS HIS PHE THR PHE HIS TRP ASP ALA SEQRES 28 A 370 LEU GLN ASP TYR ARG ASP GLY SER LYS SER GLY SER GLY SEQRES 29 A 370 HIS HIS HIS HIS HIS HIS HET PG4 A 401 13 HET EDO A 402 4 HET EDO A 403 4 HET EDO A 404 4 HET EDO A 405 4 HET FMT A 406 3 HET ZN A 407 1 HET ZN A 408 1 HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM EDO 1,2-ETHANEDIOL HETNAM FMT FORMIC ACID HETNAM ZN ZINC ION HETSYN EDO ETHYLENE GLYCOL FORMUL 2 PG4 C8 H18 O5 FORMUL 3 EDO 4(C2 H6 O2) FORMUL 7 FMT C H2 O2 FORMUL 8 ZN 2(ZN 2+) FORMUL 10 HOH *153(H2 O) HELIX 1 AA1 PRO A 29 LYS A 33 5 5 HELIX 2 AA2 ASP A 60 HIS A 83 1 24 HELIX 3 AA3 PRO A 110 TYR A 114 5 5 HELIX 4 AA4 GLY A 119 HIS A 135 1 17 HELIX 5 AA5 PRO A 136 LYS A 139 5 4 HELIX 6 AA6 ASP A 182 LEU A 186 5 5 HELIX 7 AA7 THR A 190 LEU A 211 1 22 HELIX 8 AA8 THR A 219 GLY A 227 1 9 HELIX 9 AA9 SER A 233 THR A 237 5 5 HELIX 10 AB1 THR A 246 ALA A 255 1 10 HELIX 11 AB2 CYS A 256 SER A 260 5 5 HELIX 12 AB3 LYS A 341 LEU A 343 5 3 HELIX 13 AB4 ASP A 374 LEU A 376 5 3 SHEET 1 AA1 3 GLY A 91 LEU A 92 0 SHEET 2 AA1 3 GLN A 44 LEU A 51 1 N LEU A 45 O GLY A 91 SHEET 3 AA1 3 ILE A 103 LYS A 106 1 O ILE A 103 N TYR A 49 SHEET 1 AA2 5 GLY A 91 LEU A 92 0 SHEET 2 AA2 5 GLN A 44 LEU A 51 1 N LEU A 45 O GLY A 91 SHEET 3 AA2 5 THR A 144 PRO A 149 1 O ILE A 147 N VAL A 48 SHEET 4 AA2 5 ASN A 172 ASP A 177 1 O CYS A 173 N ILE A 146 SHEET 5 AA2 5 GLY A 168 MET A 169 -1 N MET A 169 O ASN A 172 SHEET 1 AA3 2 ILE A 94 SER A 96 0 SHEET 2 AA3 2 ARG A 99 VAL A 100 -1 O ARG A 99 N SER A 96 SHEET 1 AA4 2 THR A 228 ALA A 229 0 SHEET 2 AA4 2 THR A 243 PHE A 244 1 O PHE A 244 N THR A 228 SHEET 1 AA5 3 GLU A 275 LYS A 284 0 SHEET 2 AA5 3 GLN A 287 GLN A 308 -1 O LEU A 289 N SER A 282 SHEET 3 AA5 3 VAL A 321 ASP A 339 -1 O MET A 336 N VAL A 290 SHEET 1 AA6 4 GLU A 275 LYS A 284 0 SHEET 2 AA6 4 GLN A 287 GLN A 308 -1 O LEU A 289 N SER A 282 SHEET 3 AA6 4 GLU A 350 LEU A 359 -1 O MET A 356 N ASN A 304 SHEET 4 AA6 4 HIS A 364 HIS A 372 -1 O PHE A 369 N ILE A 353 LINK NE2 HIS A 205 ZN ZN A 408 1555 1555 2.05 LINK NE2 HIS A 209 ZN ZN A 408 1555 1555 2.07 LINK NE2 HIS A 215 ZN ZN A 408 1555 1555 2.04 LINK OE1 GLN A 308 ZN ZN A 407 1555 1555 2.20 LINK O ASP A 309 ZN ZN A 407 1555 1555 2.30 LINK O PRO A 311 ZN ZN A 407 1555 1555 2.56 LINK O GLN A 316 ZN ZN A 407 1555 1555 2.27 LINK OD1 ASP A 319 ZN ZN A 407 1555 1555 2.23 LINK ZN ZN A 407 O HOH A 588 1555 1555 2.54 LINK ZN ZN A 408 O HOH A 509 1555 1555 2.28 LINK ZN ZN A 408 O HOH A 609 1555 1555 2.31 LINK ZN ZN A 408 O HOH A 632 1555 1555 2.43 CISPEP 1 PRO A 310 PRO A 311 0 -6.58 SITE 1 AC1 3 LYS A 340 LEU A 346 TRP A 373 SITE 1 AC2 5 TYR A 71 PHE A 238 GLY A 239 THR A 243 SITE 2 AC2 5 HOH A 564 SITE 1 AC3 5 TYR A 71 GLN A 74 LYS A 78 EDO A 404 SITE 2 AC3 5 HOH A 516 SITE 1 AC4 5 PHE A 75 LYS A 78 GLU A 79 EDO A 403 SITE 2 AC4 5 HOH A 579 SITE 1 AC5 6 ILE A 94 SER A 96 PHE A 283 LYS A 284 SITE 2 AC5 6 LEU A 376 ASP A 378 SITE 1 AC6 3 GLY A 162 GLY A 163 VAL A 164 SITE 1 AC7 6 GLN A 308 ASP A 309 PRO A 311 GLN A 316 SITE 2 AC7 6 ASP A 319 HOH A 588 SITE 1 AC8 6 HIS A 205 HIS A 209 HIS A 215 HOH A 509 SITE 2 AC8 6 HOH A 609 HOH A 632 CRYST1 64.861 64.861 187.426 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015418 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015418 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005335 0.00000