HEADER MEMBRANE PROTEIN 19-MAY-20 6Z37 TITLE TODX MONOAROMATIC HYDROCARBON CHANNEL DELTAS2 MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: TODX; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PUTIDA; SOURCE 3 ORGANISM_TAXID: 303; SOURCE 4 GENE: TODX; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FADL MONOAROMATIC HYDROCARBONS BIODEGRADATION TOLUENE OUTER MEMBRANE KEYWDS 2 TRANSPORT DIFFUSION TODX, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR B.VAN DEN BERG REVDAT 3 24-JAN-24 6Z37 1 REMARK REVDAT 2 30-DEC-20 6Z37 1 JRNL REVDAT 1 04-NOV-20 6Z37 0 JRNL AUTH K.SOMBOON,A.DOBLE,D.BULMER,A.BASLE,S.KHALID,B.VAN DEN BERG JRNL TITL UPTAKE OF MONOAROMATIC HYDROCARBONS DURING BIODEGRADATION BY JRNL TITL 2 FADL CHANNEL-MEDIATED LATERAL DIFFUSION. JRNL REF NAT COMMUN V. 11 6331 2020 JRNL REFN ESSN 2041-1723 JRNL PMID 33303757 JRNL DOI 10.1038/S41467-020-20126-Y REMARK 2 REMARK 2 RESOLUTION. 3.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.2_3472 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.07 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 15545 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.235 REMARK 3 R VALUE (WORKING SET) : 0.231 REMARK 3 FREE R VALUE : 0.298 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 776 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.0700 - 5.5400 1.00 2577 139 0.2336 0.2891 REMARK 3 2 5.5400 - 4.4000 1.00 2476 125 0.2203 0.2763 REMARK 3 3 4.4000 - 3.8400 1.00 2467 118 0.2159 0.3087 REMARK 3 4 3.8400 - 3.4900 1.00 2431 127 0.2321 0.3586 REMARK 3 5 3.4900 - 3.2400 1.00 2402 140 0.2558 0.2843 REMARK 3 6 3.2400 - 3.0500 1.00 2416 127 0.2924 0.3681 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.451 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.913 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 105.1 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 128.3 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 3209 REMARK 3 ANGLE : 1.338 4355 REMARK 3 CHIRALITY : 0.074 491 REMARK 3 PLANARITY : 0.006 564 REMARK 3 DIHEDRAL : 7.160 1858 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 33 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.6253 30.0363 210.1550 REMARK 3 T TENSOR REMARK 3 T11: 0.7013 T22: 1.3390 REMARK 3 T33: 1.4782 T12: -0.1438 REMARK 3 T13: 0.5318 T23: -0.8036 REMARK 3 L TENSOR REMARK 3 L11: 3.7419 L22: 0.8324 REMARK 3 L33: 0.6450 L12: 0.3483 REMARK 3 L13: 1.4613 L23: -0.0892 REMARK 3 S TENSOR REMARK 3 S11: -0.4207 S12: -0.5370 S13: 0.4166 REMARK 3 S21: -0.9726 S22: -0.0154 S23: -0.5805 REMARK 3 S31: -0.0759 S32: 1.0597 S33: 0.0631 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 34 THROUGH 208 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.6967 19.8960 194.6711 REMARK 3 T TENSOR REMARK 3 T11: 0.8067 T22: 0.7442 REMARK 3 T33: 0.8229 T12: -0.1762 REMARK 3 T13: 0.0480 T23: -0.2411 REMARK 3 L TENSOR REMARK 3 L11: 2.3987 L22: 4.2985 REMARK 3 L33: 4.2398 L12: 0.1267 REMARK 3 L13: -1.0990 L23: 2.2395 REMARK 3 S TENSOR REMARK 3 S11: -0.0736 S12: -0.3090 S13: 0.5319 REMARK 3 S21: -0.3330 S22: 0.4149 S23: -0.2943 REMARK 3 S31: -0.1196 S32: 0.2524 S33: -0.3957 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 209 THROUGH 251 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.0497 22.8137 203.2289 REMARK 3 T TENSOR REMARK 3 T11: 0.8545 T22: 0.8166 REMARK 3 T33: 0.9446 T12: -0.1046 REMARK 3 T13: 0.0504 T23: -0.2121 REMARK 3 L TENSOR REMARK 3 L11: 1.8182 L22: 2.6833 REMARK 3 L33: 5.8324 L12: -0.7135 REMARK 3 L13: -1.0007 L23: 2.6719 REMARK 3 S TENSOR REMARK 3 S11: -0.0578 S12: -0.0866 S13: 0.3801 REMARK 3 S21: 0.1460 S22: -0.3122 S23: 0.2724 REMARK 3 S31: -0.0192 S32: -1.0374 S33: 0.2618 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 252 THROUGH 282 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.4172 13.7737 194.5743 REMARK 3 T TENSOR REMARK 3 T11: 1.0643 T22: 1.0606 REMARK 3 T33: 0.9150 T12: -0.0368 REMARK 3 T13: -0.0010 T23: -0.3646 REMARK 3 L TENSOR REMARK 3 L11: 0.7372 L22: 1.1831 REMARK 3 L33: 0.3806 L12: 0.7233 REMARK 3 L13: -0.3712 L23: -0.6206 REMARK 3 S TENSOR REMARK 3 S11: -0.1000 S12: 0.2335 S13: -0.0563 REMARK 3 S21: -0.3601 S22: 1.4264 S23: -0.4643 REMARK 3 S31: 0.0101 S32: 0.6329 S33: -0.8640 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 283 THROUGH 310 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.5763 18.8449 209.2730 REMARK 3 T TENSOR REMARK 3 T11: 1.1283 T22: 1.0130 REMARK 3 T33: 0.8486 T12: 0.1676 REMARK 3 T13: 0.1628 T23: -0.2254 REMARK 3 L TENSOR REMARK 3 L11: 1.4355 L22: 4.4327 REMARK 3 L33: 7.1294 L12: 0.2456 REMARK 3 L13: 0.9045 L23: 4.0481 REMARK 3 S TENSOR REMARK 3 S11: 0.0769 S12: -0.4502 S13: 0.4320 REMARK 3 S21: -0.1700 S22: -0.3620 S23: 0.4273 REMARK 3 S31: 0.1107 S32: -0.6844 S33: 0.2941 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 311 THROUGH 351 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.5490 20.2674 207.8288 REMARK 3 T TENSOR REMARK 3 T11: 0.9339 T22: 1.1704 REMARK 3 T33: 1.0237 T12: 0.1634 REMARK 3 T13: 0.1129 T23: -0.4591 REMARK 3 L TENSOR REMARK 3 L11: 2.6550 L22: 3.1283 REMARK 3 L33: 4.4903 L12: 0.0099 REMARK 3 L13: 1.5034 L23: 1.5487 REMARK 3 S TENSOR REMARK 3 S11: -0.0211 S12: -0.7840 S13: 0.8173 REMARK 3 S21: 0.6680 S22: 0.7607 S23: -0.3552 REMARK 3 S31: 0.2205 S32: 0.9017 S33: -0.5640 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 352 THROUGH 428 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.8339 23.5503 206.6134 REMARK 3 T TENSOR REMARK 3 T11: 1.0821 T22: 1.3307 REMARK 3 T33: 1.5338 T12: -0.2426 REMARK 3 T13: 0.3377 T23: -0.7696 REMARK 3 L TENSOR REMARK 3 L11: 0.4324 L22: 2.2130 REMARK 3 L33: 3.4866 L12: -0.6393 REMARK 3 L13: 0.5406 L23: 1.7508 REMARK 3 S TENSOR REMARK 3 S11: 0.4780 S12: -1.5605 S13: 0.9603 REMARK 3 S21: 0.7850 S22: 0.2639 S23: -0.5599 REMARK 3 S31: 0.4547 S32: 0.7342 S33: -0.7394 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6Z37 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-MAY-20. REMARK 100 THE DEPOSITION ID IS D_1292108798. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15557 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.050 REMARK 200 RESOLUTION RANGE LOW (A) : 48.070 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.26 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3BRZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 71.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M NA-CITRATE (PH 3.5), 0.2 M REMARK 280 LI2SO4, 28% PEG 400, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 40.06300 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 58.27150 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 85.03400 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 40.06300 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 58.27150 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 85.03400 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 40.06300 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 58.27150 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 85.03400 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 40.06300 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 58.27150 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 85.03400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 1 REMARK 465 GLN A 2 REMARK 465 VAL A 3 REMARK 465 PRO A 401 REMARK 465 SER A 402 REMARK 465 TYR A 403 REMARK 465 LEU A 404 REMARK 465 ALA A 405 REMARK 465 GLY A 406 REMARK 465 THR A 407 REMARK 465 HIS A 429 REMARK 465 HIS A 430 REMARK 465 HIS A 431 REMARK 465 HIS A 432 REMARK 465 HIS A 433 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 20 OG SER A 32 2.05 REMARK 500 O MET A 16 OG1 THR A 19 2.08 REMARK 500 OE1 GLN A 353 OH TYR A 367 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 242 CA - CB - CG ANGL. DEV. = 13.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 5 18.97 -178.51 REMARK 500 LEU A 6 32.50 -83.98 REMARK 500 TYR A 9 151.61 70.23 REMARK 500 MET A 16 47.53 -105.56 REMARK 500 SER A 20 -20.73 -164.89 REMARK 500 SER A 22 77.86 -150.71 REMARK 500 TYR A 23 157.72 171.51 REMARK 500 ALA A 29 -4.44 -58.24 REMARK 500 SER A 32 -102.02 -154.61 REMARK 500 PRO A 41 147.26 -38.90 REMARK 500 HIS A 63 -146.02 77.58 REMARK 500 SER A 70 82.38 -163.81 REMARK 500 ASP A 85 -121.27 76.71 REMARK 500 SER A 105 65.73 -109.71 REMARK 500 LYS A 106 -11.65 -154.69 REMARK 500 SER A 123 148.63 -172.10 REMARK 500 ALA A 131 86.82 -150.04 REMARK 500 ALA A 139 -52.01 -127.13 REMARK 500 SER A 141 2.52 -59.51 REMARK 500 SER A 164 -50.76 -5.65 REMARK 500 ALA A 193 136.73 -176.65 REMARK 500 SER A 199 -99.26 -113.33 REMARK 500 SER A 202 90.55 -60.36 REMARK 500 ALA A 207 -20.50 68.59 REMARK 500 VAL A 208 96.30 50.52 REMARK 500 PHE A 283 45.59 -102.26 REMARK 500 ASN A 284 152.68 160.83 REMARK 500 TRP A 287 102.52 -55.39 REMARK 500 TYR A 297 78.08 -46.62 REMARK 500 TRP A 298 -112.65 -81.30 REMARK 500 MET A 302 65.15 -106.29 REMARK 500 ASP A 303 -142.04 -107.39 REMARK 500 ASP A 356 -84.30 54.59 REMARK 500 SER A 357 70.02 47.28 REMARK 500 GLU A 358 45.16 -107.46 REMARK 500 ILE A 360 97.77 -61.97 REMARK 500 LYS A 369 -75.52 -81.54 REMARK 500 PHE A 374 -168.56 -126.65 REMARK 500 ASP A 381 -32.00 -170.98 REMARK 500 LYS A 382 -24.55 76.85 REMARK 500 ARG A 395 123.95 -9.14 REMARK 500 GLN A 399 144.95 -172.62 REMARK 500 ILE A 417 93.57 -161.16 REMARK 500 ALA A 419 106.57 -161.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6Z34 RELATED DB: PDB DBREF 6Z37 A 1 427 UNP Q51971 Q51971_PSEPU 21 453 SEQADV 6Z37 ALA A 67 UNP Q51971 PRO 87 CONFLICT SEQADV 6Z37 A UNP Q51971 ARG 92 DELETION SEQADV 6Z37 A UNP Q51971 SER 93 DELETION SEQADV 6Z37 A UNP Q51971 ASN 94 DELETION SEQADV 6Z37 A UNP Q51971 ASN 95 DELETION SEQADV 6Z37 A UNP Q51971 ARG 96 DELETION SEQADV 6Z37 A UNP Q51971 ALA 97 DELETION SEQADV 6Z37 A UNP Q51971 PRO 98 DELETION SEQADV 6Z37 ALA A 73 UNP Q51971 INSERTION SEQADV 6Z37 ALA A 76 UNP Q51971 PRO 102 CONFLICT SEQADV 6Z37 HIS A 428 UNP Q51971 EXPRESSION TAG SEQADV 6Z37 HIS A 429 UNP Q51971 EXPRESSION TAG SEQADV 6Z37 HIS A 430 UNP Q51971 EXPRESSION TAG SEQADV 6Z37 HIS A 431 UNP Q51971 EXPRESSION TAG SEQADV 6Z37 HIS A 432 UNP Q51971 EXPRESSION TAG SEQADV 6Z37 HIS A 433 UNP Q51971 EXPRESSION TAG SEQRES 1 A 433 THR GLN VAL PHE ASP LEU GLU GLY TYR GLY ALA ILE SER SEQRES 2 A 433 ARG ALA MET GLY GLY THR SER SER SER TYR TYR THR GLY SEQRES 3 A 433 ASN ALA ALA LEU ILE SER ASN PRO ALA THR LEU SER PHE SEQRES 4 A 433 ALA PRO ASP GLY ASN GLN PHE GLU LEU GLY LEU ASP VAL SEQRES 5 A 433 VAL THR THR ASP ILE LYS VAL HIS ASP SER HIS GLY ALA SEQRES 6 A 433 GLU ALA LYS SER SER THR TYR ALA VAL GLY ALA GLN LEU SEQRES 7 A 433 SER TYR VAL ALA GLN LEU ASP ASP TRP ARG PHE GLY ALA SEQRES 8 A 433 GLY LEU PHE VAL SER SER GLY LEU GLY THR GLU TYR GLY SEQRES 9 A 433 SER LYS SER PHE LEU SER GLN THR GLU ASN GLY ILE GLN SEQRES 10 A 433 THR SER PHE ASP ASN SER SER ARG LEU ILE VAL LEU ARG SEQRES 11 A 433 ALA PRO ILE GLY PHE SER TYR GLN ALA THR SER LYS LEU SEQRES 12 A 433 THR PHE GLY ALA SER VAL ASP LEU VAL TRP THR SER LEU SEQRES 13 A 433 ASN LEU GLU LEU LEU LEU PRO SER SER GLN VAL GLY ALA SEQRES 14 A 433 LEU THR ALA GLN GLY ASN LEU SER GLY GLY LEU VAL PRO SEQRES 15 A 433 SER LEU ALA GLY PHE VAL GLY THR GLY GLY ALA ALA HIS SEQRES 16 A 433 PHE SER LEU SER ARG ASN SER THR ALA GLY GLY ALA VAL SEQRES 17 A 433 ASP ALA VAL GLY TRP GLY GLY ARG LEU GLY LEU THR TYR SEQRES 18 A 433 LYS LEU THR ASP ASN THR VAL LEU GLY ALA MET TYR ASN SEQRES 19 A 433 PHE LYS THR SER VAL GLY ASP LEU GLU GLY LYS ALA THR SEQRES 20 A 433 LEU SER ALA ILE SER GLY ASP GLY ALA VAL LEU PRO LEU SEQRES 21 A 433 ASP GLY ASP ILE ARG VAL LYS ASN PHE GLU MET PRO ALA SEQRES 22 A 433 SER LEU THR LEU GLY LEU ALA HIS GLN PHE ASN GLU ARG SEQRES 23 A 433 TRP VAL VAL ALA ALA ASP ILE LYS ARG ALA TYR TRP GLY SEQRES 24 A 433 ASP VAL MET ASP SER MET ASN VAL ALA PHE ILE SER GLN SEQRES 25 A 433 LEU GLY GLY ILE ASP VAL ALA LEU PRO HIS ARG TYR GLN SEQRES 26 A 433 ASP ILE THR VAL ALA SER ILE GLY THR ALA TYR LYS TYR SEQRES 27 A 433 ASN ASN ASP LEU THR LEU ARG ALA GLY TYR SER TYR ALA SEQRES 28 A 433 GLN GLN ALA LEU ASP SER GLU LEU ILE LEU PRO VAL ILE SEQRES 29 A 433 PRO ALA TYR LEU LYS ARG HIS VAL THR PHE GLY GLY GLU SEQRES 30 A 433 TYR ASP PHE ASP LYS ASP SER ARG ILE ASN LEU ALA ILE SEQRES 31 A 433 SER PHE GLY LEU ARG GLU ARG VAL GLN THR PRO SER TYR SEQRES 32 A 433 LEU ALA GLY THR GLU MET LEU ARG GLN SER HIS SER GLN SEQRES 33 A 433 ILE ASN ALA VAL VAL SER TYR SER LYS ASN PHE HIS HIS SEQRES 34 A 433 HIS HIS HIS HIS HELIX 1 AA1 GLY A 10 MET A 16 1 7 HELIX 2 AA2 GLY A 26 SER A 32 5 7 HELIX 3 AA3 ASN A 33 ALA A 40 5 8 HELIX 4 AA4 SER A 107 GLN A 111 5 5 HELIX 5 AA5 SER A 164 GLN A 173 1 10 HELIX 6 AA6 GLY A 179 LEU A 184 1 6 HELIX 7 AA7 LEU A 184 GLY A 189 1 6 SHEET 1 A16 GLU A 396 GLN A 399 0 SHEET 2 A16 ARG A 411 ILE A 417 -1 SHEET 3 A16 ASN A 44 HIS A 60 -1 SHEET 4 A16 ALA A 67 LEU A 84 -1 SHEET 5 A16 TRP A 87 SER A 97 -1 SHEET 6 A16 ALA A 131 GLN A 138 -1 SHEET 7 A16 LEU A 143 LEU A 151 -1 SHEET 8 A16 ARG A 216 TYR A 221 -1 SHEET 9 A16 THR A 227 ASN A 234 -1 SHEET 10 A16 SER A 274 HIS A 281 -1 SHEET 11 A16 VAL A 288 ALA A 296 -1 SHEET 12 A16 ILE A 327 TYR A 336 -1 SHEET 13 A16 LEU A 342 ALA A 351 -1 SHEET 14 A16 ARG A 370 ASP A 379 -1 SHEET 15 A16 ARG A 385 ILE A 390 -1 SHEET 16 A16 ALA A 419 TYR A 423 -1 SHEET 1 B 4 ASP A 209 GLY A 214 0 SHEET 2 B 4 ASP A 150 GLU A 159 -1 SHEET 3 B 4 SER A 123 ARG A 130 -1 SHEET 4 B 4 PHE A 94 GLU A 102 -1 SHEET 1 C 2 LEU A 158 PRO A 163 0 SHEET 2 C 2 ALA A 193 LEU A 198 -1 SHEET 1 D 2 SER A 249 ILE A 251 0 SHEET 2 D 2 VAL A 257 PRO A 259 -1 SHEET 1 E 3 GLY A 262 LYS A 267 0 SHEET 2 E 3 SER A 304 SER A 311 -1 SHEET 3 E 3 GLY A 314 PRO A 321 -1 CRYST1 80.126 116.543 170.068 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012480 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008581 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005880 0.00000