HEADER SIGNALING PROTEIN 20-MAY-20 6Z3H TITLE REPULSIVE GUIDANCE MOLECULE B (RGMB) IN COMPLEX WITH GROWTH TITLE 2 DIFFERENTIATION FACTOR 5 (GDF5) (CRYSTAL FORM 2) COMPND MOL_ID: 1; COMPND 2 MOLECULE: GROWTH/DIFFERENTIATION FACTOR 5; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GDF-5,BONE MORPHOGENETIC PROTEIN 14,BMP-14,CARTILAGE-DERIVED COMPND 5 MORPHOGENETIC PROTEIN 1,CDMP-1,LIPOPOLYSACCHARIDE-ASSOCIATED PROTEIN COMPND 6 4,LPS-ASSOCIATED PROTEIN 4,RADOTERMIN; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: RGM DOMAIN FAMILY MEMBER B; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: DRG11-RESPONSIVE AXONAL GUIDANCE AND OUTGROWTH OF NEURITE, COMPND 12 DRAGON; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GDF5, BMP14, CDMP1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: RGMB; SOURCE 13 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 14 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 16 EXPRESSION_SYSTEM_CELL_LINE: HEK293T; SOURCE 17 EXPRESSION_SYSTEM_ATCC_NUMBER: CRL-11268 KEYWDS REPULSIVE GUIDANCE MOLECULE, RGM, BONE MORPHOGENETIC PROTEIN, BMP, KEYWDS 2 GROWTH DIFFERENTIATION FACTOR 5, GDF5, NEOGENIN, AXON GUIDANCE, KEYWDS 3 TGFBETA SIGNALLING, BRAIN DEVELOPMENT, IRON METABOLISM., SIGNALING KEYWDS 4 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.MALINAUSKAS,T.V.PEER,B.BISHOP,T.D.MULLER,C.SIEBOLD REVDAT 4 24-JAN-24 6Z3H 1 SSBOND REVDAT 3 15-JUL-20 6Z3H 1 JRNL REVDAT 2 08-JUL-20 6Z3H 1 JRNL REVDAT 1 01-JUL-20 6Z3H 0 JRNL AUTH T.MALINAUSKAS,T.V.PEER,B.BISHOP,T.D.MUELLER,C.SIEBOLD JRNL TITL REPULSIVE GUIDANCE MOLECULES LOCK GROWTH DIFFERENTIATION JRNL TITL 2 FACTOR 5 IN AN INHIBITORY COMPLEX. JRNL REF PROC.NATL.ACAD.SCI.USA V. 117 15620 2020 JRNL REFN ESSN 1091-6490 JRNL PMID 32576689 JRNL DOI 10.1073/PNAS.2000561117 REMARK 2 REMARK 2 RESOLUTION. 3.16 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.15RC3_3435: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.16 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.43 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 80.7 REMARK 3 NUMBER OF REFLECTIONS : 4299 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.236 REMARK 3 R VALUE (WORKING SET) : 0.235 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.440 REMARK 3 FREE R VALUE TEST SET COUNT : 191 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.4300 - 3.1580 0.81 4108 191 0.2345 0.2682 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.100 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.050 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.001 1254 REMARK 3 ANGLE : 0.376 1703 REMARK 3 CHIRALITY : 0.036 196 REMARK 3 PLANARITY : 0.004 220 REMARK 3 DIHEDRAL : 9.344 761 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): -44.5738 25.7928 9.6914 REMARK 3 T TENSOR REMARK 3 T11: 0.2228 T22: 0.8383 REMARK 3 T33: 0.8005 T12: -0.4515 REMARK 3 T13: -0.0176 T23: 0.1146 REMARK 3 L TENSOR REMARK 3 L11: 1.1303 L22: 2.4870 REMARK 3 L33: 1.2231 L12: 0.1164 REMARK 3 L13: -0.0422 L23: 0.1532 REMARK 3 S TENSOR REMARK 3 S11: 0.2656 S12: 0.3245 S13: 0.4050 REMARK 3 S21: -0.1248 S22: -0.1593 S23: -1.3713 REMARK 3 S31: -0.5010 S32: 1.1006 S33: -1.4102 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): -31.5560 10.7714 21.4228 REMARK 3 T TENSOR REMARK 3 T11: 1.3846 T22: 1.8267 REMARK 3 T33: 2.7907 T12: -0.4648 REMARK 3 T13: -0.4596 T23: 0.2687 REMARK 3 L TENSOR REMARK 3 L11: 9.5317 L22: 0.2137 REMARK 3 L33: 8.1950 L12: 0.5399 REMARK 3 L13: 3.2075 L23: 1.3284 REMARK 3 S TENSOR REMARK 3 S11: 1.6430 S12: 0.4495 S13: -0.2681 REMARK 3 S21: 1.4479 S22: -0.2907 S23: -2.6241 REMARK 3 S31: -0.1269 S32: 1.3532 S33: -1.3126 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6Z3H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-MAY-20. REMARK 100 THE DEPOSITION ID IS D_1292108831. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6-8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 5352 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.130 REMARK 200 RESOLUTION RANGE LOW (A) : 64.980 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 35.80 REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.13 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.21 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4UI0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M (NH4)2SO4, 0.1 M SODIUM ACETATE REMARK 280 PH 4.6, 35% W/V PENTAERYTHRITOL ETHOXYLATE (15/4 EO/OH; AVERAGE REMARK 280 MW 797 DA), VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.54000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 33.27000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 66.54000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 33.27000 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 66.54000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 33.27000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 66.54000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 33.27000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15610 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -58.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 -49.43000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 85.61527 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 33.27000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 385 REMARK 465 LYS A 386 REMARK 465 ARG A 387 REMARK 465 GLN A 388 REMARK 465 GLY A 389 REMARK 465 LYS A 390 REMARK 465 ARG A 391 REMARK 465 PRO A 392 REMARK 465 SER A 393 REMARK 465 LYS A 394 REMARK 465 ASN A 395 REMARK 465 LEU A 396 REMARK 465 GLU B 50 REMARK 465 THR B 51 REMARK 465 GLY B 52 REMARK 465 HIS B 69 REMARK 465 LEU B 70 REMARK 465 ASN B 71 REMARK 465 SER B 72 REMARK 465 ALA B 73 REMARK 465 VAL B 74 REMARK 465 ASP B 75 REMARK 465 GLY B 76 REMARK 465 PHE B 77 REMARK 465 ASP B 78 REMARK 465 SER B 79 REMARK 465 GLU B 80 REMARK 465 PHE B 81 REMARK 465 SER B 122 REMARK 465 LYS B 123 REMARK 465 ASP B 124 REMARK 465 GLY B 125 REMARK 465 PRO B 126 REMARK 465 THR B 127 REMARK 465 SER B 128 REMARK 465 SER B 129 REMARK 465 THR B 130 REMARK 465 ASN B 131 REMARK 465 PRO B 132 REMARK 465 GLU B 133 REMARK 465 VAL B 134 REMARK 465 THR B 135 REMARK 465 HIS B 136 REMARK 465 GLY B 137 REMARK 465 THR B 138 REMARK 465 LYS B 139 REMARK 465 HIS B 140 REMARK 465 HIS B 141 REMARK 465 HIS B 142 REMARK 465 HIS B 143 REMARK 465 HIS B 144 REMARK 465 HIS B 145 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 397 CG CD CE NZ REMARK 470 LYS B 83 CG CD CE NZ REMARK 470 ARG B 86 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 97 CG CD CE NZ REMARK 470 GLN B 118 CG CD OE1 NE2 REMARK 470 ARG B 119 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 427 173.33 61.88 REMARK 500 CYS A 433 77.97 -109.57 REMARK 500 GLU A 442 65.31 31.65 REMARK 500 LYS B 83 -75.07 -67.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6Z3G RELATED DB: PDB REMARK 900 6Z3G CONTAINS RGMA IN COMPLEX WITH GDF5 DBREF 6Z3H A 387 501 UNP P43026 GDF5_HUMAN 387 501 DBREF 6Z3H B 53 136 UNP Q6NW40 RGMB_HUMAN 53 136 SEQADV 6Z3H MET A 385 UNP P43026 INITIATING METHIONINE SEQADV 6Z3H LYS A 386 UNP P43026 EXPRESSION TAG SEQADV 6Z3H GLU B 50 UNP Q6NW40 EXPRESSION TAG SEQADV 6Z3H THR B 51 UNP Q6NW40 EXPRESSION TAG SEQADV 6Z3H GLY B 52 UNP Q6NW40 EXPRESSION TAG SEQADV 6Z3H GLY B 137 UNP Q6NW40 EXPRESSION TAG SEQADV 6Z3H THR B 138 UNP Q6NW40 EXPRESSION TAG SEQADV 6Z3H LYS B 139 UNP Q6NW40 EXPRESSION TAG SEQADV 6Z3H HIS B 140 UNP Q6NW40 EXPRESSION TAG SEQADV 6Z3H HIS B 141 UNP Q6NW40 EXPRESSION TAG SEQADV 6Z3H HIS B 142 UNP Q6NW40 EXPRESSION TAG SEQADV 6Z3H HIS B 143 UNP Q6NW40 EXPRESSION TAG SEQADV 6Z3H HIS B 144 UNP Q6NW40 EXPRESSION TAG SEQADV 6Z3H HIS B 145 UNP Q6NW40 EXPRESSION TAG SEQRES 1 A 117 MET LYS ARG GLN GLY LYS ARG PRO SER LYS ASN LEU LYS SEQRES 2 A 117 ALA ARG CYS SER ARG LYS ALA LEU HIS VAL ASN PHE LYS SEQRES 3 A 117 ASP MET GLY TRP ASP ASP TRP ILE ILE ALA PRO LEU GLU SEQRES 4 A 117 TYR GLU ALA PHE HIS CYS GLU GLY LEU CYS GLU PHE PRO SEQRES 5 A 117 LEU ARG SER HIS LEU GLU PRO THR ASN HIS ALA VAL ILE SEQRES 6 A 117 GLN THR LEU MET ASN SER MET ASP PRO GLU SER THR PRO SEQRES 7 A 117 PRO THR CYS CYS VAL PRO THR ARG LEU SER PRO ILE SER SEQRES 8 A 117 ILE LEU PHE ILE ASP SER ALA ASN ASN VAL VAL TYR LYS SEQRES 9 A 117 GLN TYR GLU ASP MET VAL VAL GLU SER CYS GLY CYS ARG SEQRES 1 B 96 GLU THR GLY GLN CYS ARG ILE GLN LYS CYS THR THR ASP SEQRES 2 B 96 PHE VAL SER LEU THR SER HIS LEU ASN SER ALA VAL ASP SEQRES 3 B 96 GLY PHE ASP SER GLU PHE CYS LYS ALA LEU ARG ALA TYR SEQRES 4 B 96 ALA GLY CYS THR GLN ARG THR SER LYS ALA CYS ARG GLY SEQRES 5 B 96 ASN LEU VAL TYR HIS SER ALA VAL LEU GLY ILE SER ASP SEQRES 6 B 96 LEU MET SER GLN ARG ASN CYS SER LYS ASP GLY PRO THR SEQRES 7 B 96 SER SER THR ASN PRO GLU VAL THR HIS GLY THR LYS HIS SEQRES 8 B 96 HIS HIS HIS HIS HIS HELIX 1 AA1 THR A 444 ASP A 457 1 14 HELIX 2 AA2 ARG B 55 THR B 67 1 13 HELIX 3 AA3 ALA B 84 ARG B 94 1 11 HELIX 4 AA4 ASN B 102 ARG B 119 1 18 SHEET 1 AA1 2 SER A 401 LYS A 403 0 SHEET 2 AA1 2 HIS A 428 GLU A 430 -1 O GLU A 430 N SER A 401 SHEET 1 AA2 2 HIS A 406 ASN A 408 0 SHEET 2 AA2 2 GLU A 423 GLU A 425 -1 O TYR A 424 N VAL A 407 SHEET 1 AA3 3 ILE A 418 ALA A 420 0 SHEET 2 AA3 3 CYS A 466 ILE A 479 -1 O LEU A 477 N ALA A 420 SHEET 3 AA3 3 VAL A 485 CYS A 500 -1 O VAL A 486 N PHE A 478 SSBOND 1 CYS A 400 CYS A 466 1555 1555 2.03 SSBOND 2 CYS A 429 CYS A 498 1555 1555 2.03 SSBOND 3 CYS A 433 CYS A 500 1555 1555 2.03 SSBOND 4 CYS A 465 CYS A 465 1555 12565 2.03 SSBOND 5 CYS B 54 CYS B 99 1555 1555 2.03 SSBOND 6 CYS B 59 CYS B 91 1555 1555 2.03 SSBOND 7 CYS B 82 CYS B 121 1555 1555 2.03 CISPEP 1 ALA A 420 PRO A 421 0 -2.30 CISPEP 2 PHE A 435 PRO A 436 0 -7.04 CRYST1 98.860 98.860 99.810 90.00 90.00 120.00 P 62 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010115 0.005840 0.000000 0.00000 SCALE2 0.000000 0.011680 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010019 0.00000