HEADER TRANSFERASE 27-MAY-20 6Z64 TITLE CRYSTAL STRUCTURE OF NAD KINASE 1 FROM LISTERIA MONOCYTOGENES IN TITLE 2 COMPLEX WITH A DI-ADENOSINE DERIVATIVE COMPND MOL_ID: 1; COMPND 2 MOLECULE: NAD KINASE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ATP-DEPENDENT NAD KINASE; COMPND 5 EC: 2.7.1.23; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA MONOCYTOGENES EGD-E; SOURCE 3 ORGANISM_TAXID: 169963; SOURCE 4 GENE: NADK1, LMO0968; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS TETRAMERIC NAD-KINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.GELIN,G.LABESSE REVDAT 2 24-JAN-24 6Z64 1 REMARK REVDAT 1 26-MAY-21 6Z64 0 JRNL AUTH D.A.CLEMENT,C.LESEIGNEUR,M.GELIN,D.COELHO,V.HUTEAU,C.LIONNE, JRNL AUTH 2 G.LABESSE,O.DUSSURGET,S.POCHET JRNL TITL NEW CHEMICAL PROBE TARGETING BACTERIAL NAD KINASE. JRNL REF MOLECULES V. 25 2020 JRNL REFN ESSN 1420-3049 JRNL PMID 33105870 JRNL DOI 10.3390/MOLECULES25214893 REMARK 2 REMARK 2 RESOLUTION. 1.89 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.89 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.95 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 22382 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.220 REMARK 3 FREE R VALUE TEST SET COUNT : 2064 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.9500 - 4.6600 0.99 1460 144 0.2023 0.2361 REMARK 3 2 4.6600 - 3.7000 0.99 1386 145 0.1617 0.1732 REMARK 3 3 3.7000 - 3.2300 1.00 1362 146 0.1802 0.2130 REMARK 3 4 3.2300 - 2.9400 0.99 1369 129 0.2051 0.2719 REMARK 3 5 2.9400 - 2.7300 1.00 1352 146 0.2262 0.2464 REMARK 3 6 2.7300 - 2.5700 0.99 1324 155 0.2027 0.2239 REMARK 3 7 2.5600 - 2.4400 0.99 1341 148 0.2028 0.2550 REMARK 3 8 2.4400 - 2.3300 0.99 1342 133 0.2080 0.2815 REMARK 3 9 2.3300 - 2.2400 1.00 1352 126 0.2247 0.2530 REMARK 3 10 2.2400 - 2.1600 0.99 1341 145 0.2353 0.2960 REMARK 3 11 2.1600 - 2.1000 0.99 1331 130 0.2746 0.2959 REMARK 3 12 2.1000 - 2.0400 0.99 1364 124 0.2827 0.3243 REMARK 3 13 2.0400 - 1.9800 0.99 1325 132 0.3191 0.3553 REMARK 3 14 1.9800 - 1.9300 1.00 1373 123 0.3531 0.3883 REMARK 3 15 1.9300 - 1.8900 0.98 1296 138 0.3962 0.4128 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.690 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 47.08 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 102 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.6375 24.3294 22.3966 REMARK 3 T TENSOR REMARK 3 T11: 0.5128 T22: 0.5078 REMARK 3 T33: 0.4472 T12: 0.0466 REMARK 3 T13: 0.0361 T23: -0.1229 REMARK 3 L TENSOR REMARK 3 L11: 4.2807 L22: 1.5034 REMARK 3 L33: 6.3450 L12: -0.7491 REMARK 3 L13: -3.1297 L23: 0.3104 REMARK 3 S TENSOR REMARK 3 S11: 0.0471 S12: -0.4528 S13: 0.3195 REMARK 3 S21: 0.1345 S22: 0.0331 S23: -0.0712 REMARK 3 S31: -0.3089 S32: 0.0989 S33: -0.0096 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 103 THROUGH 166 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.5966 11.6492 -5.8432 REMARK 3 T TENSOR REMARK 3 T11: 0.2975 T22: 0.4528 REMARK 3 T33: 0.3862 T12: 0.0505 REMARK 3 T13: -0.0168 T23: -0.0116 REMARK 3 L TENSOR REMARK 3 L11: 1.4670 L22: 2.5218 REMARK 3 L33: 3.9741 L12: 0.1813 REMARK 3 L13: 0.5202 L23: 0.7082 REMARK 3 S TENSOR REMARK 3 S11: 0.0679 S12: 0.0933 S13: 0.0413 REMARK 3 S21: -0.1804 S22: -0.1483 S23: 0.4097 REMARK 3 S31: -0.0283 S32: -0.6454 S33: 0.0231 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 167 THROUGH 264 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.8162 14.1895 0.4704 REMARK 3 T TENSOR REMARK 3 T11: 0.2642 T22: 0.3368 REMARK 3 T33: 0.3801 T12: 0.0160 REMARK 3 T13: 0.0235 T23: -0.0187 REMARK 3 L TENSOR REMARK 3 L11: 1.5139 L22: 2.5881 REMARK 3 L33: 3.6080 L12: -0.6677 REMARK 3 L13: 0.1611 L23: -0.0830 REMARK 3 S TENSOR REMARK 3 S11: 0.1032 S12: -0.0113 S13: 0.1258 REMARK 3 S21: -0.0128 S22: -0.1753 S23: 0.3468 REMARK 3 S31: -0.0655 S32: -0.3385 S33: 0.0464 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6Z64 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-MAY-20. REMARK 100 THE DEPOSITION ID IS D_1292108962. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-MAR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.8-5.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97926 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22467 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.890 REMARK 200 RESOLUTION RANGE LOW (A) : 47.950 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 5.326 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.0600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.89 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.57 REMARK 200 R MERGE FOR SHELL (I) : 1.36800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.310 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 6RG9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30 MM NABR, 220 MM KCITRATE, GLYCEROL REMARK 280 6%, 15-16% W/V PEG400, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 31.42300 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.08500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 59.19600 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 31.42300 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.08500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 59.19600 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 31.42300 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 37.08500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 59.19600 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 31.42300 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 37.08500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 59.19600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 62.84600 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 62.84600 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 419 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 112 REMARK 465 LYS A 113 REMARK 465 LEU A 265 REMARK 465 GLU A 266 REMARK 465 HIS A 267 REMARK 465 HIS A 268 REMARK 465 HIS A 269 REMARK 465 HIS A 270 REMARK 465 HIS A 271 REMARK 465 HIS A 272 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 85 CG CD CE NZ REMARK 470 LYS A 88 CG CD CE NZ REMARK 470 GLU A 94 CG CD OE1 OE2 REMARK 470 LYS A 108 CG CD CE NZ REMARK 470 GLN A 232 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 94 18.61 55.91 REMARK 500 ASN A 122 -65.79 -100.13 REMARK 500 SER A 129 26.40 -79.34 REMARK 500 SER A 129 21.04 -79.34 REMARK 500 ALA A 162 -131.38 -104.28 REMARK 500 ALA A 185 70.81 44.71 REMARK 500 HIS A 204 -5.48 73.49 REMARK 500 ASN A 213 -86.28 -116.92 REMARK 500 ASP A 222 -124.82 50.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CIT A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue Q9K A 302 DBREF 6Z64 A 1 264 UNP Q8Y8D7 NADK1_LISMO 1 264 SEQADV 6Z64 LEU A 265 UNP Q8Y8D7 EXPRESSION TAG SEQADV 6Z64 GLU A 266 UNP Q8Y8D7 EXPRESSION TAG SEQADV 6Z64 HIS A 267 UNP Q8Y8D7 EXPRESSION TAG SEQADV 6Z64 HIS A 268 UNP Q8Y8D7 EXPRESSION TAG SEQADV 6Z64 HIS A 269 UNP Q8Y8D7 EXPRESSION TAG SEQADV 6Z64 HIS A 270 UNP Q8Y8D7 EXPRESSION TAG SEQADV 6Z64 HIS A 271 UNP Q8Y8D7 EXPRESSION TAG SEQADV 6Z64 HIS A 272 UNP Q8Y8D7 EXPRESSION TAG SEQRES 1 A 272 MET LYS TYR MET ILE THR SER LYS GLY ASP GLU LYS SER SEQRES 2 A 272 ASP LEU LEU ARG LEU ASN MET ILE ALA GLY PHE GLY GLU SEQRES 3 A 272 TYR ASP MET GLU TYR ASP ASP VAL GLU PRO GLU ILE VAL SEQRES 4 A 272 ILE SER ILE GLY GLY ASP GLY THR PHE LEU SER ALA PHE SEQRES 5 A 272 HIS GLN TYR GLU GLU ARG LEU ASP GLU ILE ALA PHE ILE SEQRES 6 A 272 GLY ILE HIS THR GLY HIS LEU GLY PHE TYR ALA ASP TRP SEQRES 7 A 272 ARG PRO ALA GLU ALA ASP LYS LEU VAL LYS LEU LEU ALA SEQRES 8 A 272 LYS GLY GLU TYR GLN LYS VAL SER TYR PRO LEU LEU LYS SEQRES 9 A 272 THR THR VAL LYS TYR GLY ILE GLY LYS LYS GLU ALA THR SEQRES 10 A 272 TYR LEU ALA LEU ASN GLU SER THR VAL LYS SER SER GLY SEQRES 11 A 272 GLY PRO PHE VAL VAL ASP VAL VAL ILE ASN ASP ILE HIS SEQRES 12 A 272 PHE GLU ARG PHE ARG GLY ASP GLY LEU CYS MET SER THR SEQRES 13 A 272 PRO SER GLY THR THR ALA TYR ASN LYS SER LEU GLY GLY SEQRES 14 A 272 ALA LEU MET HIS PRO SER ILE GLU ALA MET GLN LEU THR SEQRES 15 A 272 GLU MET ALA SER ILE ASN ASN ARG VAL TYR ARG THR ILE SEQRES 16 A 272 GLY SER PRO LEU VAL PHE PRO LYS HIS HIS VAL VAL SER SEQRES 17 A 272 LEU GLN PRO VAL ASN ASP LYS ASP PHE GLN ILE SER VAL SEQRES 18 A 272 ASP HIS LEU SER ILE LEU HIS ARG ASP VAL GLN GLU ILE SEQRES 19 A 272 ARG TYR GLU VAL SER ALA LYS LYS ILE HIS PHE ALA ARG SEQRES 20 A 272 PHE ARG SER PHE PRO PHE TRP ARG ARG VAL HIS ASP SER SEQRES 21 A 272 PHE ILE GLU ASP LEU GLU HIS HIS HIS HIS HIS HIS HET CIT A 301 13 HET Q9K A 302 45 HETNAM CIT CITRIC ACID HETNAM Q9K (2~{R},3~{R},4~{S},5~{R})-2-(6-AMINOPURIN-9-YL)-5-[[3- HETNAM 2 Q9K [6-AZANYL-9-[(2~{R},3~{R},4~{S},5~{R})-5- HETNAM 3 Q9K (HYDROXYMETHYL)-3,4-BIS(OXIDANYL)OXOLAN-2-YL]PURIN-8- HETNAM 4 Q9K YL]PROP-2-YNYL-(3-AZANYLPROPYL)AMINO]METHYL]OXOLANE-3, HETNAM 5 Q9K 4-DIOL FORMUL 2 CIT C6 H8 O7 FORMUL 3 Q9K C26 H34 N12 O7 FORMUL 4 HOH *62(H2 O) HELIX 1 AA1 ASP A 10 GLY A 25 1 16 HELIX 2 AA2 GLY A 44 TYR A 55 1 12 HELIX 3 AA3 GLU A 56 GLU A 61 5 6 HELIX 4 AA4 ARG A 79 ALA A 81 5 3 HELIX 5 AA5 GLU A 82 GLY A 93 1 12 HELIX 6 AA6 PRO A 157 THR A 161 5 5 HELIX 7 AA7 ALA A 162 LEU A 167 1 6 HELIX 8 AA8 PRO A 252 ILE A 262 1 11 SHEET 1 AA110 GLU A 30 TYR A 31 0 SHEET 2 AA110 LYS A 2 SER A 7 1 N TYR A 3 O GLU A 30 SHEET 3 AA110 ILE A 38 GLY A 43 1 O ILE A 40 N THR A 6 SHEET 4 AA110 ALA A 63 HIS A 68 1 O ILE A 67 N SER A 41 SHEET 5 AA110 VAL A 231 ARG A 247 1 O HIS A 244 N PHE A 64 SHEET 6 AA110 VAL A 207 PRO A 211 -1 N LEU A 209 O ILE A 234 SHEET 7 AA110 PHE A 133 ILE A 139 -1 N ASP A 136 O GLN A 210 SHEET 8 AA110 ILE A 142 SER A 155 -1 O GLU A 145 N VAL A 137 SHEET 9 AA110 ALA A 178 SER A 186 -1 O THR A 182 N CYS A 153 SHEET 10 AA110 LEU A 199 PRO A 202 -1 O LEU A 199 N LEU A 181 SHEET 1 AA2 9 GLU A 115 ALA A 120 0 SHEET 2 AA2 9 GLN A 96 TYR A 109 -1 N VAL A 107 O ALA A 116 SHEET 3 AA2 9 VAL A 231 ARG A 247 -1 O PHE A 245 N VAL A 98 SHEET 4 AA2 9 VAL A 207 PRO A 211 -1 N LEU A 209 O ILE A 234 SHEET 5 AA2 9 PHE A 133 ILE A 139 -1 N ASP A 136 O GLN A 210 SHEET 6 AA2 9 ILE A 142 SER A 155 -1 O GLU A 145 N VAL A 137 SHEET 7 AA2 9 GLU A 123 SER A 128 -1 N SER A 124 O MET A 154 SHEET 8 AA2 9 PHE A 217 VAL A 221 -1 O GLN A 218 N LYS A 127 SHEET 9 AA2 9 LEU A 224 HIS A 228 -1 O ILE A 226 N ILE A 219 SITE 1 AC1 10 VAL A 98 TYR A 100 HIS A 173 ARG A 247 SITE 2 AC1 10 PHE A 251 PRO A 252 PHE A 253 ARG A 256 SITE 3 AC1 10 HOH A 426 HOH A 452 SITE 1 AC2 22 ASP A 45 GLY A 46 LEU A 49 HIS A 71 SITE 2 AC2 22 PHE A 74 TYR A 75 ASN A 122 GLU A 123 SITE 3 AC2 22 PRO A 132 ARG A 148 ASP A 150 SER A 158 SITE 4 AC2 22 THR A 161 ALA A 162 TYR A 163 SER A 166 SITE 5 AC2 22 ALA A 185 ILE A 187 ASN A 189 HOH A 415 SITE 6 AC2 22 HOH A 444 HOH A 447 CRYST1 62.846 74.170 118.392 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015912 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013483 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008447 0.00000