HEADER VIRAL PROTEIN 28-MAY-20 6Z6D TITLE CRYSTAL STRUCTURE OF THE HK97 BACTERIOPHAGE LARGE TERMINASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TERMINASE LARGE SUBUNIT; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE HK97; SOURCE 3 ORGANISM_TAXID: 37554; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GENOME PACKAGING, BACTERIOPHAGE, ATPASE, NUCLEASE, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.K.H.FUNG,M.CHECHIK,C.G.BAUMANN,A.A.ANTSON REVDAT 3 19-JUN-24 6Z6D 1 REMARK REVDAT 2 21-DEC-22 6Z6D 1 JRNL REVDAT 1 09-JUN-21 6Z6D 0 JRNL AUTH H.K.H.FUNG,S.GRIMES,A.HUET,R.L.DUDA,M.CHECHIK,J.GAULT, JRNL AUTH 2 C.V.ROBINSON,R.W.HENDRIX,P.J.JARDINE,J.F.CONWAY,C.G.BAUMANN, JRNL AUTH 3 A.A.ANTSON JRNL TITL STRUCTURAL BASIS OF DNA PACKAGING BY A RING-TYPE ATPASE FROM JRNL TITL 2 AN ARCHETYPAL VIRAL SYSTEM. JRNL REF NUCLEIC ACIDS RES. V. 50 8719 2022 JRNL REFN ESSN 1362-4962 JRNL PMID 35947691 JRNL DOI 10.1093/NAR/GKAC647 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 103.23 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 25551 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.600 REMARK 3 FREE R VALUE TEST SET COUNT : 1244 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1820 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.85 REMARK 3 BIN R VALUE (WORKING SET) : 0.3300 REMARK 3 BIN FREE R VALUE SET COUNT : 88 REMARK 3 BIN FREE R VALUE : 0.3350 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3522 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 17 REMARK 3 SOLVENT ATOMS : 93 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.69000 REMARK 3 B22 (A**2) : -1.01000 REMARK 3 B33 (A**2) : 3.14000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.69000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.264 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.215 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.199 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.595 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.913 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3591 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3316 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4894 ; 1.258 ; 1.960 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7647 ; 0.905 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 479 ; 7.801 ; 5.042 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 137 ;38.650 ;24.526 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 549 ;12.086 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;12.913 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 576 ; 0.064 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4064 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 698 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6Z6D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-MAY-20. REMARK 100 THE DEPOSITION ID IS D_1292108976. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-MAR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9198 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS OCT 15, 2015 REMARK 200 DATA SCALING SOFTWARE : XDS OCT 15, 2015 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26796 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 103.230 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.13600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.27 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.84200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELXD 2013/2 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6 M AMMONIUM SULFATE, PH 7.6, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 105.89350 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 19.57300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 105.89350 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 19.57300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -9 REMARK 465 GLY A -8 REMARK 465 SER A -7 REMARK 465 SER A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 GLU A 19 REMARK 465 GLY A 20 REMARK 465 LYS A 21 REMARK 465 LEU A 22 REMARK 465 ASN A 484 REMARK 465 GLY A 485 REMARK 465 GLU A 486 REMARK 465 VAL A 487 REMARK 465 THR A 488 REMARK 465 GLU A 489 REMARK 465 GLN A 490 REMARK 465 GLY A 491 REMARK 465 GLY A 492 REMARK 465 ASP A 493 REMARK 465 PHE A 494 REMARK 465 ASP A 495 REMARK 465 ASP A 496 REMARK 465 PHE A 497 REMARK 465 ILE A 498 REMARK 465 PHE A 499 REMARK 465 ARG A 500 REMARK 465 PRO A 501 REMARK 465 LEU A 502 REMARK 465 SER A 503 REMARK 465 MET A 504 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 13 NE CZ NH1 NH2 REMARK 470 ILE A 23 CG1 CG2 CD1 REMARK 470 GLN A 25 CG CD OE1 NE2 REMARK 470 LYS A 109 CE NZ REMARK 470 LYS A 140 CG CD CE NZ REMARK 470 THR A 141 OG1 CG2 REMARK 470 HIS A 143 CG ND1 CD2 CE1 NE2 REMARK 470 ARG A 159 CD NE CZ NH1 NH2 REMARK 470 ASP A 201 CG OD1 OD2 REMARK 470 LYS A 204 CG CD CE NZ REMARK 470 LYS A 219 CG CD CE NZ REMARK 470 ASP A 220 CG OD1 OD2 REMARK 470 LYS A 225 CD CE NZ REMARK 470 ARG A 247 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 250 CG CD OE1 OE2 REMARK 470 ARG A 254 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 296 CD CE NZ REMARK 470 LEU A 303 CD1 CD2 REMARK 470 SER A 304 OG REMARK 470 ARG A 306 NE CZ NH1 NH2 REMARK 470 ASP A 308 CG OD1 OD2 REMARK 470 GLN A 333 CG CD OE1 NE2 REMARK 470 LYS A 334 CE NZ REMARK 470 GLU A 338 CG CD OE1 OE2 REMARK 470 ARG A 339 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 348 CG OD1 OD2 REMARK 470 VAL A 351 CG1 CG2 REMARK 470 THR A 359 OG1 CG2 REMARK 470 SER A 363 OG REMARK 470 SER A 367 OG REMARK 470 VAL A 369 CG1 CG2 REMARK 470 GLU A 375 CG CD OE1 OE2 REMARK 470 SER A 384 OG REMARK 470 ARG A 389 CG CD NE CZ NH1 NH2 REMARK 470 TRP A 390 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 390 CZ3 CH2 REMARK 470 ARG A 391 CD NE CZ NH1 NH2 REMARK 470 ASP A 393 CG OD1 OD2 REMARK 470 GLN A 394 CG CD OE1 NE2 REMARK 470 ARG A 396 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 397 CG CD CE NZ REMARK 470 ASP A 398 CG OD1 OD2 REMARK 470 ILE A 402 CG1 CG2 CD1 REMARK 470 VAL A 409 CG1 CG2 REMARK 470 GLU A 410 CG CD OE1 OE2 REMARK 470 LYS A 416 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 57 36.15 71.05 REMARK 500 HIS A 143 -70.63 -69.46 REMARK 500 SER A 146 72.55 -160.07 REMARK 500 THR A 238 -68.98 -103.22 REMARK 500 ARG A 295 -178.09 -171.00 REMARK 500 ASP A 308 -76.50 -109.34 REMARK 500 ASP A 320 -172.14 -69.22 REMARK 500 ARG A 433 39.59 -98.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BR A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BR A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BR A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BR A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BR A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BR A 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BR A 607 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BR A 608 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BR A 609 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BR A 610 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BR A 611 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BR A 613 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BR A 614 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BR A 615 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BR A 617 DBREF 6Z6D A 1 504 UNP Q9MCT1 Q9MCT1_BPHK7 1 504 SEQADV 6Z6D MET A -9 UNP Q9MCT1 INITIATING METHIONINE SEQADV 6Z6D GLY A -8 UNP Q9MCT1 EXPRESSION TAG SEQADV 6Z6D SER A -7 UNP Q9MCT1 EXPRESSION TAG SEQADV 6Z6D SER A -6 UNP Q9MCT1 EXPRESSION TAG SEQADV 6Z6D HIS A -5 UNP Q9MCT1 EXPRESSION TAG SEQADV 6Z6D HIS A -4 UNP Q9MCT1 EXPRESSION TAG SEQADV 6Z6D HIS A -3 UNP Q9MCT1 EXPRESSION TAG SEQADV 6Z6D HIS A -2 UNP Q9MCT1 EXPRESSION TAG SEQADV 6Z6D HIS A -1 UNP Q9MCT1 EXPRESSION TAG SEQADV 6Z6D HIS A 0 UNP Q9MCT1 EXPRESSION TAG SEQRES 1 A 514 MET GLY SER SER HIS HIS HIS HIS HIS HIS MET THR ARG SEQRES 2 A 514 GLY GLU ARG VAL ILE ALA PHE ILE GLU ARG PHE CYS ILE SEQRES 3 A 514 VAL PRO GLU GLY LYS LEU ILE GLY GLN PRO MET ARG LEU SEQRES 4 A 514 ASP PRO PHE GLN LYS ASP PHE ILE LEU ALA VAL TYR ASP SEQRES 5 A 514 ASN PRO ALA GLY THR ASP MET ALA ILE LEU SER ILE ALA SEQRES 6 A 514 ARG LYS ASN GLY LYS THR GLY LEU ILE ALA GLY ILE LEU SEQRES 7 A 514 LEU ALA HIS LEU VAL GLY PRO GLU ALA VAL GLN ASN THR SEQRES 8 A 514 GLN ILE VAL SER GLY ALA LEU SER ARG GLU GLN ALA ALA SEQRES 9 A 514 ILE VAL PHE ASN LEU ALA VAL LYS MET VAL ASN LEU ASN SEQRES 10 A 514 PRO LYS LEU GLN GLU ILE VAL HIS ILE THR PRO SER GLY SEQRES 11 A 514 LYS LYS LEU ILE GLY LEU PRO CYS ASN VAL GLU TYR LYS SEQRES 12 A 514 ALA LEU SER ALA GLU GLY LYS THR THR HIS GLY LEU SER SEQRES 13 A 514 PRO ILE LEU ALA ILE LEU ASP GLU THR GLY GLN VAL ARG SEQRES 14 A 514 GLY PRO GLN ASP ASP PHE ILE ASP ALA ILE THR THR ALA SEQRES 15 A 514 GLN GLY ALA HIS GLU ASN PRO LEU LEU ILE VAL ILE SER SEQRES 16 A 514 THR GLN ALA ALA ASN ASP ALA ASP LEU LEU SER ILE TRP SEQRES 17 A 514 ILE ASP ASP ALA VAL LYS SER LYS ASP PRO HIS ILE VAL SEQRES 18 A 514 CYS HIS VAL TYR GLU ALA PRO LYS ASP ALA ASP ILE SER SEQRES 19 A 514 LYS ARG GLU SER TRP LEU ALA ALA ASN PRO ALA LEU GLY SEQRES 20 A 514 THR PHE ARG SER GLU LYS ASP MET ALA ARG GLN ALA GLU SEQRES 21 A 514 LYS ALA GLY ARG MET PRO SER PHE GLU ASN THR PHE ARG SEQRES 22 A 514 ASN LEU ASN LEU ASN GLN ARG VAL SER THR VAL SER PRO SEQRES 23 A 514 PHE ILE SER ARG SER VAL TRP GLU LEU CYS GLY GLU MET SEQRES 24 A 514 PRO ILE ASN THR PRO ARG LYS TRP TYR ALA GLY LEU ASP SEQRES 25 A 514 LEU SER ALA ARG ASN ASP LEU THR ALA LEU VAL ILE ALA SEQRES 26 A 514 GLY GLU ALA ASP ASP GLY VAL TRP ASP VAL PHE PRO PHE SEQRES 27 A 514 PHE TRP THR PRO GLN LYS THR LEU GLU GLU ARG THR LYS SEQRES 28 A 514 THR ASP ARG ALA PRO TYR ASP VAL TRP VAL ARG GLU GLY SEQRES 29 A 514 LEU LEU ARG THR THR PRO GLY ALA SER VAL ASP TYR SER SEQRES 30 A 514 PHE VAL VAL ALA ASP ILE ALA GLU ILE ILE GLY ASP PHE SEQRES 31 A 514 ASP LEU THR SER MET ALA PHE ASP ARG TRP ARG ILE ASP SEQRES 32 A 514 GLN PHE ARG LYS ASP ALA ASP ALA ILE GLY LEU SER LEU SEQRES 33 A 514 PRO LEU VAL GLU PHE GLY GLN GLY PHE LYS ASP MET GLY SEQRES 34 A 514 PRO ALA VAL ASP THR LEU GLU SER LEU MET LEU ASN GLY SEQRES 35 A 514 ARG VAL ARG HIS GLY MET HIS PRO VAL LEU THR MET CYS SEQRES 36 A 514 ALA VAL ASN ALA VAL VAL VAL LYS ASP ALA ALA GLY ASN SEQRES 37 A 514 ARG LYS LEU ASP LYS SER LYS ALA THR GLY ARG ILE ASP SEQRES 38 A 514 GLY MET VAL ALA MET THR MET SER VAL GLY ALA ALA ASN SEQRES 39 A 514 GLY GLU VAL THR GLU GLN GLY GLY ASP PHE ASP ASP PHE SEQRES 40 A 514 ILE PHE ARG PRO LEU SER MET HET BR A 601 1 HET BR A 602 1 HET BR A 603 1 HET BR A 604 1 HET BR A 605 2 HET BR A 606 1 HET BR A 607 1 HET BR A 608 1 HET BR A 609 1 HET BR A 610 1 HET BR A 611 1 HET BR A 612 1 HET BR A 613 1 HET BR A 614 1 HET BR A 615 1 HET BR A 616 1 HET BR A 617 1 HETNAM BR BROMIDE ION FORMUL 2 BR 17(BR 1-) FORMUL 19 HOH *93(H2 O) HELIX 1 AA1 THR A 2 CYS A 15 1 14 HELIX 2 AA2 ASP A 30 ASP A 42 1 13 HELIX 3 AA3 GLY A 59 VAL A 73 1 15 HELIX 4 AA4 SER A 89 ASN A 107 1 19 HELIX 5 AA5 ASN A 107 GLU A 112 1 6 HELIX 6 AA6 THR A 155 VAL A 158 5 4 HELIX 7 AA7 ASP A 163 GLY A 174 1 12 HELIX 8 AA8 ASP A 193 LYS A 206 1 14 HELIX 9 AA9 LYS A 225 ASN A 233 1 9 HELIX 10 AB1 SER A 241 MET A 255 1 15 HELIX 11 AB2 PHE A 258 ASN A 268 1 11 HELIX 12 AB3 SER A 279 LEU A 285 1 7 HELIX 13 AB4 THR A 335 ARG A 344 1 10 HELIX 14 AB5 PRO A 346 GLU A 353 1 8 HELIX 15 AB6 ASP A 365 ILE A 377 1 13 HELIX 16 AB7 GLY A 378 PHE A 380 5 3 HELIX 17 AB8 ARG A 391 ILE A 402 1 12 HELIX 18 AB9 GLY A 414 ASN A 431 1 18 HELIX 19 AC1 HIS A 439 ALA A 449 1 11 HELIX 20 AC2 ILE A 470 ALA A 482 1 13 SHEET 1 AA1 8 VAL A 114 ILE A 116 0 SHEET 2 AA1 8 LYS A 122 GLY A 125 -1 O ILE A 124 N HIS A 115 SHEET 3 AA1 8 VAL A 130 SER A 136 -1 O TYR A 132 N LEU A 123 SHEET 4 AA1 8 GLN A 82 ALA A 87 1 N SER A 85 O LEU A 135 SHEET 5 AA1 8 LEU A 149 ASP A 153 1 O ASP A 153 N GLY A 86 SHEET 6 AA1 8 LEU A 180 ILE A 184 1 O ILE A 182 N LEU A 152 SHEET 7 AA1 8 MET A 49 SER A 53 1 N ALA A 50 O VAL A 183 SHEET 8 AA1 8 ILE A 210 VAL A 214 1 O VAL A 211 N ILE A 51 SHEET 1 AA2 3 THR A 273 PRO A 276 0 SHEET 2 AA2 3 VAL A 450 LYS A 453 -1 O LYS A 453 N THR A 273 SHEET 3 AA2 3 ARG A 459 LEU A 461 -1 O LYS A 460 N VAL A 452 SHEET 1 AA3 6 ARG A 357 THR A 359 0 SHEET 2 AA3 6 TRP A 323 PRO A 332 1 N THR A 331 O THR A 359 SHEET 3 AA3 6 THR A 310 GLU A 317 -1 N LEU A 312 O PHE A 328 SHEET 4 AA3 6 TRP A 297 ASP A 302 -1 N TYR A 298 O ALA A 315 SHEET 5 AA3 6 LEU A 382 ASP A 388 1 O THR A 383 N TRP A 297 SHEET 6 AA3 6 LEU A 408 PHE A 411 1 O PHE A 411 N PHE A 387 SHEET 1 AA4 3 ARG A 357 THR A 359 0 SHEET 2 AA4 3 TRP A 323 PRO A 332 1 N THR A 331 O THR A 359 SHEET 3 AA4 3 VAL A 434 ARG A 435 1 O ARG A 435 N TRP A 323 SITE 1 AC1 2 ASN A 190 ALA A 455 SITE 1 AC2 3 GLY A 412 GLY A 414 ASP A 417 SITE 1 AC3 1 ASN A 98 SITE 1 AC4 1 HOH A 731 SITE 1 AC5 2 ARG A 56 ASN A 266 SITE 1 AC6 1 LYS A 57 SITE 1 AC7 5 HIS A 71 VAL A 78 THR A 81 VAL A 130 SITE 2 AC7 5 HOH A 724 SITE 1 AC8 3 SER A 427 ARG A 459 HOH A 757 SITE 1 AC9 3 SER A 405 LEU A 406 PRO A 407 SITE 1 AD1 1 ILE A 8 SITE 1 AD2 2 LYS A 60 GLN A 92 SITE 1 AD3 2 PHE A 239 SER A 241 SITE 1 AD4 1 VAL A 274 SITE 1 AD5 3 LYS A 121 ALA A 134 SER A 136 SITE 1 AD6 1 LEU A 382 CRYST1 211.787 39.146 65.450 90.00 103.39 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004722 0.000000 0.001124 0.00000 SCALE2 0.000000 0.025545 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015705 0.00000