HEADER PEPTIDE BINDING PROTEIN 09-JUN-20 6ZBZ TITLE SMALL-MOLECULE INHIBITORS OF THE PDZ DOMAIN OF DISHEVELLED PROTEINS TITLE 2 INTERRUPT WNT SIGNALLING COMPND MOL_ID: 1; COMPND 2 MOLECULE: DISHEVELLED, DSH HOMOLOG 3 (DROSOPHILA), ISOFORM CRA_B; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DKFZP586M1622, DVL3, HCG_40299; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET32 KEYWDS PDZ, DVL, INHIBITORS, WNT, SIGNALLING, PEPTIDE BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.ROSKE,U.HEINEMANN,H.OSCHKINAT REVDAT 3 24-JAN-24 6ZBZ 1 REMARK REVDAT 2 20-JUL-22 6ZBZ 1 JRNL REVDAT 1 23-JUN-21 6ZBZ 0 JRNL AUTH Y.ROSKE,U.HEINEMANN,H.OSCHKINAT,N.KAMDEM,D.KOVALSKYY, JRNL AUTH 2 M.O.PLATONOV,O.M.BALINSKYI,A.KREUCHWIG,J.SAUPE,L.FANG, JRNL AUTH 3 A.DIEHL,P.SCHMIEDER,G.KRAUSE,J.RADEMANN,W.BIRCHMEIER JRNL TITL SMALL-MOLECULE INHIBITORS OF THE PDZ DOMAIN OF DISHEVELLED JRNL TITL 2 PROTEINS INTERRUPT WNT SIGNALLING JRNL REF J.MAGN.RESON. 2021 JRNL REFN ISSN 0022-2364 JRNL DOI 10.5194/MR-2-355-2021 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.59 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 44227 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2328 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3227 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.82 REMARK 3 BIN R VALUE (WORKING SET) : 0.2360 REMARK 3 BIN FREE R VALUE SET COUNT : 170 REMARK 3 BIN FREE R VALUE : 0.3070 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2684 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 100 REMARK 3 SOLVENT ATOMS : 387 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.01 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.27000 REMARK 3 B22 (A**2) : 0.36000 REMARK 3 B33 (A**2) : -0.08000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.131 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.098 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.073 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.719 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.953 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2878 ; 0.001 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 2765 ; 0.002 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3904 ; 0.999 ; 1.679 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6343 ; 1.044 ; 1.597 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 372 ; 8.003 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 130 ;37.909 ;23.846 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 507 ;13.422 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;15.831 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 392 ; 0.023 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3240 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 509 ; 0.005 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 5643 ; 0.510 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 244 A 336 REMARK 3 ORIGIN FOR THE GROUP (A): -26.3255 2.1007 -3.5975 REMARK 3 T TENSOR REMARK 3 T11: 0.0096 T22: 0.0006 REMARK 3 T33: 0.0229 T12: 0.0003 REMARK 3 T13: -0.0023 T23: 0.0006 REMARK 3 L TENSOR REMARK 3 L11: 0.3241 L22: 0.3639 REMARK 3 L33: 0.3061 L12: 0.0636 REMARK 3 L13: 0.1627 L23: 0.0195 REMARK 3 S TENSOR REMARK 3 S11: 0.0094 S12: -0.0015 S13: -0.0154 REMARK 3 S21: 0.0090 S22: 0.0002 S23: 0.0046 REMARK 3 S31: 0.0040 S32: -0.0119 S33: -0.0096 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 244 B 336 REMARK 3 ORIGIN FOR THE GROUP (A): -35.0566 -16.8480 -12.1655 REMARK 3 T TENSOR REMARK 3 T11: 0.0086 T22: 0.0039 REMARK 3 T33: 0.0233 T12: -0.0001 REMARK 3 T13: 0.0023 T23: 0.0000 REMARK 3 L TENSOR REMARK 3 L11: 0.3697 L22: 0.3546 REMARK 3 L33: 0.1729 L12: 0.1336 REMARK 3 L13: -0.0531 L23: -0.1485 REMARK 3 S TENSOR REMARK 3 S11: -0.0048 S12: -0.0151 S13: -0.0241 REMARK 3 S21: -0.0108 S22: -0.0087 S23: -0.0302 REMARK 3 S31: 0.0038 S32: 0.0056 S33: 0.0135 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 244 C 336 REMARK 3 ORIGIN FOR THE GROUP (A): -22.0292 -10.4335 -33.1846 REMARK 3 T TENSOR REMARK 3 T11: 0.0099 T22: 0.0028 REMARK 3 T33: 0.0219 T12: -0.0029 REMARK 3 T13: -0.0016 T23: 0.0009 REMARK 3 L TENSOR REMARK 3 L11: 0.3203 L22: 0.3115 REMARK 3 L33: 0.2823 L12: 0.1242 REMARK 3 L13: -0.1557 L23: 0.0487 REMARK 3 S TENSOR REMARK 3 S11: 0.0238 S12: -0.0145 S13: 0.0018 REMARK 3 S21: 0.0152 S22: -0.0124 S23: -0.0162 REMARK 3 S31: -0.0049 S32: 0.0101 S33: -0.0113 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 246 D 336 REMARK 3 ORIGIN FOR THE GROUP (A): -2.1554 -20.8943 -16.1912 REMARK 3 T TENSOR REMARK 3 T11: 0.0029 T22: 0.0190 REMARK 3 T33: 0.0150 T12: -0.0042 REMARK 3 T13: -0.0041 T23: 0.0074 REMARK 3 L TENSOR REMARK 3 L11: 0.7134 L22: 0.9921 REMARK 3 L33: 0.6292 L12: 0.0812 REMARK 3 L13: -0.3902 L23: -0.1475 REMARK 3 S TENSOR REMARK 3 S11: -0.0230 S12: 0.0625 S13: 0.0110 REMARK 3 S21: -0.0200 S22: 0.0444 S23: 0.0592 REMARK 3 S31: 0.0088 S32: -0.0639 S33: -0.0214 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 6ZBZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1292109256. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-MAY-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91841 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46555 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 34.590 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 23.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.64 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2F0A REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 8000, 0.1 M MES PH 5.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.41850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.59100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.02950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 43.59100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.41850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.02950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 242 REMARK 465 MET A 243 REMARK 465 GLU A 270 REMARK 465 ARG A 271 REMARK 465 GLY A 272 REMARK 465 ALA B 242 REMARK 465 MET B 243 REMARK 465 ALA C 242 REMARK 465 MET C 243 REMARK 465 ASN C 269 REMARK 465 GLU C 270 REMARK 465 ARG C 271 REMARK 465 GLY C 272 REMARK 465 ASP C 273 REMARK 465 ALA D 242 REMARK 465 MET D 243 REMARK 465 SER D 244 REMARK 465 LEU D 245 REMARK 465 SER D 268 REMARK 465 ASN D 269 REMARK 465 GLU D 270 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU B 270 CG CD OE1 OE2 REMARK 470 ASN C 309 CG OD1 ND2 REMARK 470 ASN D 246 CG OD1 ND2 REMARK 470 THR D 330 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 304 5.45 80.62 REMARK 500 ASN B 303 -114.22 50.95 REMARK 500 ASN C 303 -120.78 52.45 REMARK 500 PHE C 307 53.78 -90.27 REMARK 500 GLU D 255 -71.10 -104.37 REMARK 500 ASN D 303 -116.20 51.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 591 DISTANCE = 6.34 ANGSTROMS REMARK 525 HOH A 592 DISTANCE = 6.42 ANGSTROMS REMARK 525 HOH A 593 DISTANCE = 6.75 ANGSTROMS REMARK 525 HOH A 594 DISTANCE = 8.19 ANGSTROMS REMARK 525 HOH B 613 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH B 614 DISTANCE = 6.34 ANGSTROMS REMARK 525 HOH B 615 DISTANCE = 6.40 ANGSTROMS REMARK 525 HOH C 613 DISTANCE = 6.27 ANGSTROMS REMARK 525 HOH C 614 DISTANCE = 6.90 ANGSTROMS REMARK 525 HOH C 615 DISTANCE = 7.06 ANGSTROMS REMARK 525 HOH C 616 DISTANCE = 7.72 ANGSTROMS REMARK 525 HOH C 617 DISTANCE = 8.32 ANGSTROMS REMARK 525 HOH C 618 DISTANCE = 10.38 ANGSTROMS REMARK 525 HOH C 619 DISTANCE = 11.13 ANGSTROMS REMARK 525 HOH C 620 DISTANCE = 14.41 ANGSTROMS REMARK 525 HOH D 555 DISTANCE = 9.50 ANGSTROMS REMARK 525 HOH D 556 DISTANCE = 10.15 ANGSTROMS REMARK 525 HOH D 557 DISTANCE = 10.81 ANGSTROMS REMARK 525 HOH D 558 DISTANCE = 11.73 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue QE5 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue QE5 B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue QE5 C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue QE5 D 401 DBREF 6ZBZ A 243 335 UNP Q9UG07 Q9UG07_HUMAN 75 167 DBREF 6ZBZ B 243 335 UNP Q9UG07 Q9UG07_HUMAN 75 167 DBREF 6ZBZ C 243 335 UNP Q9UG07 Q9UG07_HUMAN 75 167 DBREF 6ZBZ D 243 335 UNP Q9UG07 Q9UG07_HUMAN 75 167 SEQADV 6ZBZ ALA A 242 UNP Q9UG07 EXPRESSION TAG SEQADV 6ZBZ SER A 336 UNP Q9UG07 EXPRESSION TAG SEQADV 6ZBZ ALA B 242 UNP Q9UG07 EXPRESSION TAG SEQADV 6ZBZ SER B 336 UNP Q9UG07 EXPRESSION TAG SEQADV 6ZBZ ALA C 242 UNP Q9UG07 EXPRESSION TAG SEQADV 6ZBZ SER C 336 UNP Q9UG07 EXPRESSION TAG SEQADV 6ZBZ ALA D 242 UNP Q9UG07 EXPRESSION TAG SEQADV 6ZBZ SER D 336 UNP Q9UG07 EXPRESSION TAG SEQRES 1 A 95 ALA MET SER LEU ASN ILE ILE THR VAL THR LEU ASN MET SEQRES 2 A 95 GLU LYS TYR ASN PHE LEU GLY ILE SER ILE VAL GLY GLN SEQRES 3 A 95 SER ASN GLU ARG GLY ASP GLY GLY ILE TYR ILE GLY SER SEQRES 4 A 95 ILE MET LYS GLY GLY ALA VAL ALA ALA ASP GLY ARG ILE SEQRES 5 A 95 GLU PRO GLY ASP MET LEU LEU GLN VAL ASN GLU ILE ASN SEQRES 6 A 95 PHE GLU ASN MET SER ASN ASP ASP ALA VAL ARG VAL LEU SEQRES 7 A 95 ARG GLU ILE VAL HIS LYS PRO GLY PRO ILE THR LEU THR SEQRES 8 A 95 VAL ALA LYS SER SEQRES 1 B 95 ALA MET SER LEU ASN ILE ILE THR VAL THR LEU ASN MET SEQRES 2 B 95 GLU LYS TYR ASN PHE LEU GLY ILE SER ILE VAL GLY GLN SEQRES 3 B 95 SER ASN GLU ARG GLY ASP GLY GLY ILE TYR ILE GLY SER SEQRES 4 B 95 ILE MET LYS GLY GLY ALA VAL ALA ALA ASP GLY ARG ILE SEQRES 5 B 95 GLU PRO GLY ASP MET LEU LEU GLN VAL ASN GLU ILE ASN SEQRES 6 B 95 PHE GLU ASN MET SER ASN ASP ASP ALA VAL ARG VAL LEU SEQRES 7 B 95 ARG GLU ILE VAL HIS LYS PRO GLY PRO ILE THR LEU THR SEQRES 8 B 95 VAL ALA LYS SER SEQRES 1 C 95 ALA MET SER LEU ASN ILE ILE THR VAL THR LEU ASN MET SEQRES 2 C 95 GLU LYS TYR ASN PHE LEU GLY ILE SER ILE VAL GLY GLN SEQRES 3 C 95 SER ASN GLU ARG GLY ASP GLY GLY ILE TYR ILE GLY SER SEQRES 4 C 95 ILE MET LYS GLY GLY ALA VAL ALA ALA ASP GLY ARG ILE SEQRES 5 C 95 GLU PRO GLY ASP MET LEU LEU GLN VAL ASN GLU ILE ASN SEQRES 6 C 95 PHE GLU ASN MET SER ASN ASP ASP ALA VAL ARG VAL LEU SEQRES 7 C 95 ARG GLU ILE VAL HIS LYS PRO GLY PRO ILE THR LEU THR SEQRES 8 C 95 VAL ALA LYS SER SEQRES 1 D 95 ALA MET SER LEU ASN ILE ILE THR VAL THR LEU ASN MET SEQRES 2 D 95 GLU LYS TYR ASN PHE LEU GLY ILE SER ILE VAL GLY GLN SEQRES 3 D 95 SER ASN GLU ARG GLY ASP GLY GLY ILE TYR ILE GLY SER SEQRES 4 D 95 ILE MET LYS GLY GLY ALA VAL ALA ALA ASP GLY ARG ILE SEQRES 5 D 95 GLU PRO GLY ASP MET LEU LEU GLN VAL ASN GLU ILE ASN SEQRES 6 D 95 PHE GLU ASN MET SER ASN ASP ASP ALA VAL ARG VAL LEU SEQRES 7 D 95 ARG GLU ILE VAL HIS LYS PRO GLY PRO ILE THR LEU THR SEQRES 8 D 95 VAL ALA LYS SER HET QE5 A 401 22 HET QE5 B 401 22 HET EDO B 402 4 HET QE5 C 401 22 HET EDO C 402 4 HET EDO C 403 4 HET QE5 D 401 22 HETNAM QE5 2-[(3,4-DIMETHYLPHENYL)SULFONYLAMINO]-5-FLUORANYL- HETNAM 2 QE5 BENZOIC ACID HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 5 QE5 4(C15 H14 F N O4 S) FORMUL 7 EDO 3(C2 H6 O2) FORMUL 12 HOH *387(H2 O) HELIX 1 AA1 GLY A 285 GLY A 291 1 7 HELIX 2 AA2 SER A 311 HIS A 324 1 14 HELIX 3 AA3 GLY B 285 GLY B 291 1 7 HELIX 4 AA4 SER B 311 LYS B 325 1 15 HELIX 5 AA5 GLY C 285 GLY C 291 1 7 HELIX 6 AA6 SER C 311 HIS C 324 1 14 HELIX 7 AA7 GLY D 285 GLY D 291 1 7 HELIX 8 AA8 SER D 311 LYS D 325 1 15 SHEET 1 AA1 5 ILE A 247 LEU A 252 0 SHEET 2 AA1 5 ILE A 329 ALA A 334 -1 O LEU A 331 N VAL A 250 SHEET 3 AA1 5 MET A 298 VAL A 302 -1 N MET A 298 O ALA A 334 SHEET 4 AA1 5 ILE A 276 ILE A 281 -1 N ILE A 276 O LEU A 299 SHEET 5 AA1 5 ILE A 262 VAL A 265 -1 N SER A 263 O GLY A 279 SHEET 1 AA2 4 ILE A 247 LEU A 252 0 SHEET 2 AA2 4 ILE A 329 ALA A 334 -1 O LEU A 331 N VAL A 250 SHEET 3 AA2 4 MET A 298 VAL A 302 -1 N MET A 298 O ALA A 334 SHEET 4 AA2 4 ILE A 305 ASN A 306 -1 O ILE A 305 N VAL A 302 SHEET 1 AA3 4 ILE B 247 LEU B 252 0 SHEET 2 AA3 4 ILE B 329 ALA B 334 -1 O LEU B 331 N VAL B 250 SHEET 3 AA3 4 MET B 298 VAL B 302 -1 N MET B 298 O ALA B 334 SHEET 4 AA3 4 ILE B 305 ASN B 306 -1 O ILE B 305 N VAL B 302 SHEET 1 AA4 2 ILE B 262 GLY B 266 0 SHEET 2 AA4 2 ILE B 276 ILE B 281 -1 O TYR B 277 N VAL B 265 SHEET 1 AA5 4 ILE C 247 LEU C 252 0 SHEET 2 AA5 4 ILE C 329 ALA C 334 -1 O ILE C 329 N LEU C 252 SHEET 3 AA5 4 MET C 298 VAL C 302 -1 N MET C 298 O ALA C 334 SHEET 4 AA5 4 ILE C 305 ASN C 306 -1 O ILE C 305 N VAL C 302 SHEET 1 AA6 2 ILE C 262 GLY C 266 0 SHEET 2 AA6 2 ILE C 276 ILE C 281 -1 O TYR C 277 N VAL C 265 SHEET 1 AA7 5 ILE D 247 LEU D 252 0 SHEET 2 AA7 5 ILE D 329 ALA D 334 -1 O LEU D 331 N VAL D 250 SHEET 3 AA7 5 MET D 298 VAL D 302 -1 N LEU D 300 O THR D 332 SHEET 4 AA7 5 ILE D 276 ILE D 281 -1 N ILE D 276 O LEU D 299 SHEET 5 AA7 5 ILE D 262 GLY D 266 -1 N VAL D 265 O TYR D 277 SHEET 1 AA8 4 ILE D 247 LEU D 252 0 SHEET 2 AA8 4 ILE D 329 ALA D 334 -1 O LEU D 331 N VAL D 250 SHEET 3 AA8 4 MET D 298 VAL D 302 -1 N LEU D 300 O THR D 332 SHEET 4 AA8 4 ILE D 305 ASN D 306 -1 O ILE D 305 N VAL D 302 SITE 1 AC1 11 PHE A 259 LEU A 260 GLY A 261 ILE A 262 SITE 2 AC1 11 ARG A 320 VAL A 323 HIS A 324 HOH A 533 SITE 3 AC1 11 LEU C 300 GLN C 301 HOH C 599 SITE 1 AC2 12 PHE B 259 LEU B 260 GLY B 261 ILE B 262 SITE 2 AC2 12 LEU B 319 ARG B 320 VAL B 323 HIS B 324 SITE 3 AC2 12 HOH B 529 ASN C 253 GLU C 255 PRO C 328 SITE 1 AC3 6 GLN B 267 SER B 268 ASN B 269 MET B 310 SITE 2 AC3 6 SER B 311 HOH B 522 SITE 1 AC4 13 MET B 310 ASP B 314 VAL B 318 GLU B 321 SITE 2 AC4 13 PHE C 259 LEU C 260 GLY C 261 ILE C 262 SITE 3 AC4 13 VAL C 316 LEU C 319 ARG C 320 VAL C 323 SITE 4 AC4 13 HIS C 324 SITE 1 AC5 6 ILE C 322 LYS C 325 PRO C 326 HOH C 507 SITE 2 AC5 6 HOH C 532 HOH C 556 SITE 1 AC6 2 ASN A 269 ASP A 273 SITE 1 AC7 11 ASN A 303 GLU A 304 ILE A 305 LEU D 260 SITE 2 AC7 11 GLY D 261 ILE D 262 LEU D 319 ARG D 320 SITE 3 AC7 11 VAL D 323 HIS D 324 HOH D 520 CRYST1 56.837 70.059 87.182 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017594 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014274 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011470 0.00000