HEADER OXIDOREDUCTASE 12-JUN-20 6ZCW TITLE CRYSTAL STRUCTURE OF LANTHANIDE-DEPENDENT ALCOHOL DEHYDROGENASE PEDH TITLE 2 FROM PSEUDOMONAS PUTIDA KT2440 COMPND MOL_ID: 1; COMPND 2 MOLECULE: QUINOPROTEIN ETHANOL DEHYDROGENASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.1.2.8; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PUTIDA KT2440; SOURCE 3 ORGANISM_TAXID: 160488; SOURCE 4 GENE: QEDH-II, PP_2679; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR G.BANGE,A.LEPAK,E.M.ELSAYED REVDAT 3 24-JAN-24 6ZCW 1 REMARK REVDAT 2 11-AUG-21 6ZCW 1 JRNL REMARK REVDAT 1 15-JUL-20 6ZCW 0 JRNL AUTH M.WEHRMANN,E.M.ELSAYED,S.KOBBING,L.BENDZ,A.LEPAK,J.SCHWABE, JRNL AUTH 2 N.WIERCKX,G.BANGE,J.KLEBENSBERGER JRNL TITL ENGINEERED PQQ-DEPENDENT ALCOHOL DEHYDROGENASE FOR THE JRNL TITL 2 OXIDATION OF 5-(HYDROXYMETHYL)FUROIC ACID JRNL REF ACS CATALYSIS V. 10 7836 2020 JRNL REFN ESSN 2155-5435 JRNL DOI 10.1021/ACSCATAL.0C01789 REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.08 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 126444 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.172 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.41 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4612 REMARK 3 ANGLE : 0.883 6285 REMARK 3 CHIRALITY : 0.060 634 REMARK 3 PLANARITY : 0.005 824 REMARK 3 DIHEDRAL : 16.558 1642 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6ZCW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1292106981. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-DEC-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P14 (MX2) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97626 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 126727 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 47.810 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 26.70 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.2700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.71 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 1FLG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.25 MM PEDH WITH EQUIMOLAR REMARK 280 CONCENTRATION OF PQQ AND METAL OF INTEREST IN 0.1 M SODIUM REMARK 280 ACETATE PH 4.6 AND 30 % (W/V) PEG 2000 MME, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 93.56500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 52.64000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 52.64000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 140.34750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 52.64000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 52.64000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 46.78250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 52.64000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 52.64000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 140.34750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 52.64000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 52.64000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 46.78250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 93.56500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 880 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1680 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1869 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 27 REMARK 465 THR A 590 REMARK 465 ALA A 591 REMARK 465 SER A 592 REMARK 465 VAL A 593 REMARK 465 LYS A 594 REMARK 465 PRO A 595 REMARK 465 HIS A 596 REMARK 465 HIS A 597 REMARK 465 HIS A 598 REMARK 465 HIS A 599 REMARK 465 HIS A 600 REMARK 465 HIS A 601 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 PHE A 277 N CA C O CB CG CD1 REMARK 480 PHE A 277 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 522 O HOH A 1301 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 38 33.29 -96.77 REMARK 500 GLN A 83 -116.37 -117.43 REMARK 500 ARG A 84 -166.82 61.32 REMARK 500 CYS A 132 45.99 -142.54 REMARK 500 ASP A 133 163.71 91.42 REMARK 500 VAL A 134 48.98 -90.58 REMARK 500 TYR A 296 44.62 -101.40 REMARK 500 ASP A 337 -79.27 -112.27 REMARK 500 ASN A 417 -138.04 -109.34 REMARK 500 LEU A 455 -66.01 -99.29 REMARK 500 ILE A 469 -56.29 -129.27 REMARK 500 TRP A 493 22.70 -144.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 PR A1202 PR REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 199 OE1 REMARK 620 2 GLU A 199 OE2 48.7 REMARK 620 3 ASN A 281 OD1 116.1 74.6 REMARK 620 4 ASP A 323 OD1 105.2 70.9 75.5 REMARK 620 5 ASP A 325 OD1 160.4 130.5 77.5 62.9 REMARK 620 6 ASP A 325 OD2 146.2 144.5 71.2 108.5 49.3 REMARK 620 7 PQQ A1201 O5 89.1 121.6 153.0 89.2 75.8 93.6 REMARK 620 8 PQQ A1201 N6 70.1 116.4 130.7 153.4 112.9 80.6 64.9 REMARK 620 9 PQQ A1201 O7B 78.1 90.1 74.7 148.0 120.5 72.2 122.8 58.3 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PQQ A 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PR A 1202 DBREF 6ZCW A 28 595 UNP Q88JH0 Q88JH0_PSEPK 28 595 SEQADV 6ZCW MET A 27 UNP Q88JH0 INITIATING METHIONINE SEQADV 6ZCW GLN A 81 UNP Q88JH0 GLU 81 CONFLICT SEQADV 6ZCW HIS A 596 UNP Q88JH0 EXPRESSION TAG SEQADV 6ZCW HIS A 597 UNP Q88JH0 EXPRESSION TAG SEQADV 6ZCW HIS A 598 UNP Q88JH0 EXPRESSION TAG SEQADV 6ZCW HIS A 599 UNP Q88JH0 EXPRESSION TAG SEQADV 6ZCW HIS A 600 UNP Q88JH0 EXPRESSION TAG SEQADV 6ZCW HIS A 601 UNP Q88JH0 EXPRESSION TAG SEQRES 1 A 575 MET ALA VAL SER ASN GLU GLU ILE LEU GLN ASP PRO LYS SEQRES 2 A 575 ASN PRO GLN GLN ILE VAL THR ASN GLY LEU GLY VAL GLN SEQRES 3 A 575 GLY GLN ARG TYR SER PRO LEU ASP LEU LEU ASN VAL ASN SEQRES 4 A 575 ASN VAL LYS GLU LEU ARG PRO VAL TRP ALA PHE SER PHE SEQRES 5 A 575 GLY GLY GLN LYS GLN ARG GLY GLN GLN ALA GLN PRO LEU SEQRES 6 A 575 ILE LYS ASP GLY VAL MET TYR LEU THR GLY SER TYR SER SEQRES 7 A 575 ARG VAL PHE ALA VAL ASP ALA ARG THR GLY LYS LYS LEU SEQRES 8 A 575 TRP GLN TYR ASP ALA ARG LEU PRO ASP ASP ILE ARG PRO SEQRES 9 A 575 CYS CYS ASP VAL ILE ASN ARG GLY VAL ALA LEU TYR GLY SEQRES 10 A 575 ASN LEU VAL PHE PHE GLY THR LEU ASP ALA LYS LEU VAL SEQRES 11 A 575 ALA LEU ASN LYS ASP THR GLY LYS VAL VAL TRP SER LYS SEQRES 12 A 575 LYS VAL ALA ASP HIS LYS GLU GLY TYR SER ILE SER ALA SEQRES 13 A 575 ALA PRO MET ILE VAL ASN GLY LYS LEU ILE THR GLY VAL SEQRES 14 A 575 ALA GLY GLY GLU PHE GLY VAL VAL GLY LYS ILE GLN ALA SEQRES 15 A 575 TYR ASN PRO GLU ASN GLY GLU LEU LEU TRP MET ARG PRO SEQRES 16 A 575 THR VAL GLU GLY HIS MET GLY TYR VAL TYR LYS ASP GLY SEQRES 17 A 575 LYS ALA ILE GLU ASN GLY ILE SER GLY GLY GLU ALA GLY SEQRES 18 A 575 LYS THR TRP PRO GLY ASP LEU TRP LYS THR GLY GLY ALA SEQRES 19 A 575 ALA PRO TRP LEU GLY GLY TYR TYR ASP PRO GLU THR ASN SEQRES 20 A 575 LEU ILE LEU PHE GLY THR GLY ASN PRO ALA PRO TRP ASN SEQRES 21 A 575 SER HIS LEU ARG PRO GLY ASP ASN LEU TYR SER SER SER SEQRES 22 A 575 ARG LEU ALA LEU ASN PRO ASP ASP GLY THR ILE LYS TRP SEQRES 23 A 575 HIS PHE GLN SER THR PRO HIS ASP GLY TRP ASP PHE ASP SEQRES 24 A 575 GLY VAL ASN GLU LEU ILE SER PHE ASN TYR LYS ASP GLY SEQRES 25 A 575 GLY LYS GLU VAL LYS ALA ALA ALA THR ALA ASP ARG ASN SEQRES 26 A 575 GLY PHE PHE TYR VAL LEU ASP ARG THR ASN GLY LYS PHE SEQRES 27 A 575 ILE ARG GLY PHE PRO PHE VAL ASP LYS ILE THR TRP ALA SEQRES 28 A 575 THR GLY LEU ASP LYS ASP GLY ARG PRO ILE TYR ASN ASP SEQRES 29 A 575 ALA SER ARG PRO GLY ALA PRO GLY SER GLU ALA LYS GLY SEQRES 30 A 575 SER SER VAL PHE VAL ALA PRO ALA PHE LEU GLY ALA LYS SEQRES 31 A 575 ASN TRP MET PRO MET ALA TYR ASN LYS ASP THR GLY LEU SEQRES 32 A 575 PHE TYR VAL PRO SER ASN GLU TRP GLY MET ASP ILE TRP SEQRES 33 A 575 ASN GLU GLY ILE ALA TYR LYS LYS GLY ALA ALA PHE LEU SEQRES 34 A 575 GLY ALA GLY PHE THR ILE LYS PRO LEU ASN GLU ASP TYR SEQRES 35 A 575 ILE GLY VAL LEU ARG ALA ILE ASP PRO VAL SER GLY LYS SEQRES 36 A 575 GLU VAL TRP ARG HIS LYS ASN TYR ALA PRO LEU TRP GLY SEQRES 37 A 575 GLY VAL LEU THR THR LYS GLY ASN LEU VAL PHE THR GLY SEQRES 38 A 575 THR PRO GLU GLY PHE LEU GLN ALA PHE ASN ALA LYS THR SEQRES 39 A 575 GLY ASP LYS VAL TRP GLU PHE GLN THR GLY SER GLY VAL SEQRES 40 A 575 LEU GLY SER PRO VAL THR TRP GLU MET ASP GLY GLU GLN SEQRES 41 A 575 TYR VAL SER VAL VAL SER GLY TRP GLY GLY ALA VAL PRO SEQRES 42 A 575 LEU TRP GLY GLY GLU VAL ALA LYS ARG VAL LYS ASP PHE SEQRES 43 A 575 ASN GLN GLY GLY MET LEU TRP THR PHE LYS LEU PRO LYS SEQRES 44 A 575 GLN LEU GLN GLN THR ALA SER VAL LYS PRO HIS HIS HIS SEQRES 45 A 575 HIS HIS HIS HET PQQ A1201 24 HET PR A1202 1 HETNAM PQQ PYRROLOQUINOLINE QUINONE HETNAM PR PRASEODYMIUM ION FORMUL 2 PQQ C14 H6 N2 O8 FORMUL 3 PR PR 3+ FORMUL 4 HOH *571(H2 O) HELIX 1 AA1 SER A 30 ASP A 37 1 8 HELIX 2 AA2 ASN A 66 LEU A 70 5 5 HELIX 3 AA3 ASP A 173 GLY A 177 5 5 HELIX 4 AA4 GLY A 197 GLY A 201 5 5 HELIX 5 AA5 ASP A 253 GLY A 258 5 6 HELIX 6 AA6 ASN A 286 ARG A 290 5 5 HELIX 7 AA7 ASP A 390 ARG A 393 5 4 HELIX 8 AA8 ALA A 557 GLY A 562 1 6 HELIX 9 AA9 GLY A 562 VAL A 569 1 8 HELIX 10 AB1 PRO A 584 GLN A 588 5 5 SHEET 1 AA1 5 TYR A 56 SER A 57 0 SHEET 2 AA1 5 VAL A 496 THR A 499 1 O THR A 498 N SER A 57 SHEET 3 AA1 5 LEU A 503 GLY A 507 -1 O PHE A 505 N LEU A 497 SHEET 4 AA1 5 PHE A 512 ASN A 517 -1 O GLN A 514 N THR A 506 SHEET 5 AA1 5 LYS A 523 GLN A 528 -1 O VAL A 524 N ALA A 515 SHEET 1 AA2 4 ARG A 71 SER A 77 0 SHEET 2 AA2 4 MET A 577 LYS A 582 -1 O THR A 580 N VAL A 73 SHEET 3 AA2 4 GLU A 545 SER A 552 -1 N VAL A 548 O PHE A 581 SHEET 4 AA2 4 VAL A 538 MET A 542 -1 N TRP A 540 O TYR A 547 SHEET 1 AA3 4 LEU A 91 LYS A 93 0 SHEET 2 AA3 4 VAL A 96 GLY A 101 -1 O TYR A 98 N LEU A 91 SHEET 3 AA3 4 ARG A 105 ASP A 110 -1 O VAL A 109 N MET A 97 SHEET 4 AA3 4 LYS A 116 ASP A 121 -1 O LEU A 117 N ALA A 108 SHEET 1 AA4 4 ALA A 140 TYR A 142 0 SHEET 2 AA4 4 LEU A 145 GLY A 149 -1 O PHE A 147 N ALA A 140 SHEET 3 AA4 4 LYS A 154 ASN A 159 -1 O LEU A 158 N VAL A 146 SHEET 4 AA4 4 VAL A 165 LYS A 170 -1 O VAL A 166 N ALA A 157 SHEET 1 AA5 6 MET A 185 VAL A 187 0 SHEET 2 AA5 6 LYS A 190 THR A 193 -1 O ILE A 192 N MET A 185 SHEET 3 AA5 6 LYS A 205 TYR A 209 -1 O TYR A 209 N LEU A 191 SHEET 4 AA5 6 LEU A 216 PRO A 221 -1 O LEU A 217 N ALA A 208 SHEET 5 AA5 6 MET A 227 LYS A 232 -1 O TYR A 229 N MET A 219 SHEET 6 AA5 6 LYS A 235 ILE A 241 -1 O ILE A 237 N VAL A 230 SHEET 1 AA6 4 GLY A 266 ASP A 269 0 SHEET 2 AA6 4 LEU A 274 GLY A 278 -1 O LEU A 276 N TYR A 267 SHEET 3 AA6 4 SER A 299 LEU A 303 -1 O LEU A 301 N PHE A 277 SHEET 4 AA6 4 ILE A 310 GLN A 315 -1 O LYS A 311 N ALA A 302 SHEET 1 AA7 4 ILE A 331 LYS A 336 0 SHEET 2 AA7 4 GLU A 341 ALA A 348 -1 O VAL A 342 N TYR A 335 SHEET 3 AA7 4 PHE A 353 ASP A 358 -1 O TYR A 355 N THR A 347 SHEET 4 AA7 4 PHE A 364 PRO A 369 -1 O PHE A 368 N PHE A 354 SHEET 1 AA8 2 ALA A 377 LEU A 380 0 SHEET 2 AA8 2 PRO A 386 TYR A 388 -1 O ILE A 387 N GLY A 379 SHEET 1 AA9 3 VAL A 406 VAL A 408 0 SHEET 2 AA9 3 TRP A 437 ASN A 443 -1 O MET A 439 N VAL A 408 SHEET 3 AA9 3 ALA A 457 PRO A 463 -1 O LYS A 462 N GLY A 438 SHEET 1 AB1 4 ALA A 422 ASN A 424 0 SHEET 2 AB1 4 LEU A 429 ASN A 435 -1 O TYR A 431 N ALA A 422 SHEET 3 AB1 4 GLY A 470 ASP A 476 -1 O ILE A 475 N PHE A 430 SHEET 4 AB1 4 LYS A 481 ASN A 488 -1 O VAL A 483 N ALA A 474 SSBOND 1 CYS A 131 CYS A 132 1555 1555 2.07 LINK OE1 GLU A 199 PR PR A1202 1555 1555 2.62 LINK OE2 GLU A 199 PR PR A1202 1555 1555 2.66 LINK OD1 ASN A 281 PR PR A1202 1555 1555 2.40 LINK OD1 ASP A 323 PR PR A1202 1555 1555 2.67 LINK OD1 ASP A 325 PR PR A1202 1555 1555 2.68 LINK OD2 ASP A 325 PR PR A1202 1555 1555 2.61 LINK O5 PQQ A1201 PR PR A1202 1555 1555 2.42 LINK N6 PQQ A1201 PR PR A1202 1555 1555 2.62 LINK O7B PQQ A1201 PR PR A1202 1555 1555 2.55 CISPEP 1 ASP A 37 PRO A 38 0 -0.99 CISPEP 2 ALA A 283 PRO A 284 0 -2.91 CISPEP 3 LEU A 295 TYR A 296 0 -7.34 CISPEP 4 ALA A 409 PRO A 410 0 -3.59 SITE 1 AC1 24 GLN A 87 CYS A 131 CYS A 132 ARG A 137 SITE 2 AC1 24 SER A 181 ALA A 196 GLY A 197 GLY A 198 SITE 3 AC1 24 GLU A 199 ALA A 261 TRP A 263 ASN A 281 SITE 4 AC1 24 ASP A 323 ASP A 325 ARG A 350 LEU A 413 SITE 5 AC1 24 ASN A 417 TRP A 493 GLY A 556 ALA A 557 SITE 6 AC1 24 PR A1202 HOH A1306 HOH A1344 HOH A1547 SITE 1 AC2 5 GLU A 199 ASN A 281 ASP A 323 ASP A 325 SITE 2 AC2 5 PQQ A1201 CRYST1 105.280 105.280 187.130 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009498 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009498 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005344 0.00000