HEADER PEPTIDE BINDING PROTEIN 16-JUN-20 6ZF1 TITLE KEAP1 KELCH DOMAIN BOUND TO A SMALL MOLECULE INHIBITOR OF THE KEAP1- TITLE 2 NRF2 PROTEIN-PROTEIN INTERACTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: KELCH-LIKE ECH-ASSOCIATED PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CYTOSOLIC INHIBITOR OF NRF2,INRF2; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: KEAP1, INRF2, KIAA0132; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS KEAP1, NRF2, OXIDATIVE STRESS, SMALL MOLECULE COMPLEX, PEPTIDE KEYWDS 2 BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.NARAYANAN,A.BACH,M.GAJHEDE REVDAT 3 24-JAN-24 6ZF1 1 REMARK REVDAT 2 05-MAY-21 6ZF1 1 JRNL REVDAT 1 14-APR-21 6ZF1 0 JRNL AUTH J.S.PALLESEN,D.NARAYANAN,K.T.TRAN,S.M.O.SOLBAK,G.MARSEGLIA, JRNL AUTH 2 L.M.E.SORENSEN,L.J.HOJ,F.MUNAFO,R.M.C.CARMONA,A.D.GARCIA, JRNL AUTH 3 H.L.DESU,R.BRAMBILLA,T.N.JOHANSEN,G.M.POPOWICZ,M.SATTLER, JRNL AUTH 4 M.GAJHEDE,A.BACH JRNL TITL DECONSTRUCTING NONCOVALENT KELCH-LIKE ECH-ASSOCIATED PROTEIN JRNL TITL 2 1 (KEAP1) INHIBITORS INTO FRAGMENTS TO RECONSTRUCT NEW JRNL TITL 3 POTENT COMPOUNDS. JRNL REF J.MED.CHEM. V. 64 4623 2021 JRNL REFN ISSN 0022-2623 JRNL PMID 33818106 JRNL DOI 10.1021/ACS.JMEDCHEM.0C02094 REMARK 2 REMARK 2 RESOLUTION. 1.74 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.74 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.55 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 34680 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.184 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1735 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.5500 - 3.9800 1.00 2830 150 0.1404 0.1545 REMARK 3 2 3.9800 - 3.1600 1.00 2788 147 0.1647 0.1711 REMARK 3 3 3.1600 - 2.7600 1.00 2750 145 0.1773 0.1715 REMARK 3 4 2.7600 - 2.5100 1.00 2764 145 0.1715 0.2145 REMARK 3 5 2.5100 - 2.3300 1.00 2750 145 0.1708 0.2093 REMARK 3 6 2.3300 - 2.1900 1.00 2754 145 0.1633 0.1923 REMARK 3 7 2.1900 - 2.0800 1.00 2742 145 0.1680 0.2189 REMARK 3 8 2.0800 - 1.9900 1.00 2720 143 0.1690 0.1917 REMARK 3 9 1.9900 - 1.9200 1.00 2746 143 0.1638 0.1968 REMARK 3 10 1.9200 - 1.8500 1.00 2751 145 0.1861 0.2224 REMARK 3 11 1.8500 - 1.7900 1.00 2748 145 0.2068 0.2484 REMARK 3 12 1.7900 - 1.7400 0.95 2602 137 0.2509 0.2667 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.165 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.402 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.51 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2337 REMARK 3 ANGLE : 1.009 3177 REMARK 3 CHIRALITY : 0.065 329 REMARK 3 PLANARITY : 0.007 415 REMARK 3 DIHEDRAL : 13.559 1325 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 325 THROUGH 341 ) REMARK 3 ORIGIN FOR THE GROUP (A): -42.1456 -22.0624 -7.4695 REMARK 3 T TENSOR REMARK 3 T11: 0.2358 T22: 0.2299 REMARK 3 T33: 0.3697 T12: 0.0178 REMARK 3 T13: -0.0430 T23: -0.0834 REMARK 3 L TENSOR REMARK 3 L11: 3.2750 L22: 1.3860 REMARK 3 L33: 3.0258 L12: -0.7498 REMARK 3 L13: 0.4625 L23: 0.0396 REMARK 3 S TENSOR REMARK 3 S11: 0.0274 S12: 0.0673 S13: -0.4110 REMARK 3 S21: -0.1451 S22: -0.2470 S23: 0.1391 REMARK 3 S31: 0.1989 S32: -0.1438 S33: 0.1946 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 342 THROUGH 377 ) REMARK 3 ORIGIN FOR THE GROUP (A): -40.0682 -17.6823 -12.1948 REMARK 3 T TENSOR REMARK 3 T11: 0.2987 T22: 0.2772 REMARK 3 T33: 0.3546 T12: 0.0605 REMARK 3 T13: -0.0516 T23: -0.0686 REMARK 3 L TENSOR REMARK 3 L11: 1.5449 L22: 0.7973 REMARK 3 L33: 0.9766 L12: -0.4188 REMARK 3 L13: 0.4668 L23: 0.0167 REMARK 3 S TENSOR REMARK 3 S11: 0.1426 S12: 0.2736 S13: -0.4099 REMARK 3 S21: -0.2753 S22: -0.1539 S23: 0.3654 REMARK 3 S31: -0.0910 S32: -0.0592 S33: 0.0091 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 378 THROUGH 406 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.2961 -22.3016 -8.8849 REMARK 3 T TENSOR REMARK 3 T11: 0.3031 T22: 0.2279 REMARK 3 T33: 0.3131 T12: 0.0540 REMARK 3 T13: -0.0343 T23: -0.0421 REMARK 3 L TENSOR REMARK 3 L11: 2.5847 L22: 1.3894 REMARK 3 L33: 2.3920 L12: -0.1386 REMARK 3 L13: 0.8487 L23: 0.3142 REMARK 3 S TENSOR REMARK 3 S11: 0.1778 S12: 0.1759 S13: -0.4916 REMARK 3 S21: -0.1723 S22: -0.0685 S23: 0.0823 REMARK 3 S31: 0.3400 S32: 0.2060 S33: -0.1647 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 407 THROUGH 475 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.1596 -8.3163 -0.0854 REMARK 3 T TENSOR REMARK 3 T11: 0.2290 T22: 0.2145 REMARK 3 T33: 0.1939 T12: 0.0013 REMARK 3 T13: 0.0135 T23: 0.0204 REMARK 3 L TENSOR REMARK 3 L11: 1.5293 L22: 1.5966 REMARK 3 L33: 0.4981 L12: -0.5855 REMARK 3 L13: 0.2265 L23: 0.5133 REMARK 3 S TENSOR REMARK 3 S11: -0.0121 S12: -0.0168 S13: 0.0119 REMARK 3 S21: 0.0269 S22: 0.0605 S23: -0.1537 REMARK 3 S31: -0.0850 S32: 0.1002 S33: -0.0602 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 476 THROUGH 500 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.6745 -1.7958 9.0599 REMARK 3 T TENSOR REMARK 3 T11: 0.2524 T22: 0.2497 REMARK 3 T33: 0.1947 T12: 0.0214 REMARK 3 T13: -0.0154 T23: -0.0012 REMARK 3 L TENSOR REMARK 3 L11: 1.8420 L22: 1.5595 REMARK 3 L33: 1.8308 L12: 0.1443 REMARK 3 L13: -0.8724 L23: -0.7522 REMARK 3 S TENSOR REMARK 3 S11: -0.1189 S12: -0.3099 S13: 0.0902 REMARK 3 S21: 0.2345 S22: 0.0580 S23: -0.1467 REMARK 3 S31: 0.0170 S32: 0.0247 S33: 0.0443 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 501 THROUGH 547 ) REMARK 3 ORIGIN FOR THE GROUP (A): -45.1628 -2.5526 7.3625 REMARK 3 T TENSOR REMARK 3 T11: 0.2768 T22: 0.2497 REMARK 3 T33: 0.2192 T12: 0.0197 REMARK 3 T13: 0.0619 T23: 0.0219 REMARK 3 L TENSOR REMARK 3 L11: 1.9005 L22: 1.4785 REMARK 3 L33: 0.7856 L12: -0.1960 REMARK 3 L13: 0.1160 L23: 0.6422 REMARK 3 S TENSOR REMARK 3 S11: -0.0928 S12: -0.2053 S13: -0.0306 REMARK 3 S21: 0.1789 S22: 0.0632 S23: 0.1400 REMARK 3 S31: -0.0165 S32: 0.0316 S33: 0.0445 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 548 THROUGH 569 ) REMARK 3 ORIGIN FOR THE GROUP (A): -50.2463 -9.7949 -1.8436 REMARK 3 T TENSOR REMARK 3 T11: 0.2020 T22: 0.2485 REMARK 3 T33: 0.3373 T12: 0.0053 REMARK 3 T13: -0.0110 T23: 0.0105 REMARK 3 L TENSOR REMARK 3 L11: 1.9322 L22: 2.3438 REMARK 3 L33: 2.6168 L12: -0.6040 REMARK 3 L13: -0.4937 L23: -0.1585 REMARK 3 S TENSOR REMARK 3 S11: 0.0355 S12: 0.1871 S13: -0.3238 REMARK 3 S21: -0.1140 S22: -0.0613 S23: 0.6083 REMARK 3 S31: 0.0192 S32: -0.2422 S33: -0.0054 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 570 THROUGH 589 ) REMARK 3 ORIGIN FOR THE GROUP (A): -52.9956 -13.2787 0.4987 REMARK 3 T TENSOR REMARK 3 T11: 0.2601 T22: 0.2283 REMARK 3 T33: 0.4235 T12: -0.0012 REMARK 3 T13: 0.0768 T23: 0.0152 REMARK 3 L TENSOR REMARK 3 L11: 1.2503 L22: 0.6018 REMARK 3 L33: 1.1314 L12: 0.1396 REMARK 3 L13: -0.1170 L23: 0.7974 REMARK 3 S TENSOR REMARK 3 S11: -0.0127 S12: 0.0393 S13: -0.6249 REMARK 3 S21: 0.1027 S22: -0.1546 S23: 0.6631 REMARK 3 S31: 0.1259 S32: -0.1394 S33: 0.1478 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 590 THROUGH 612 ) REMARK 3 ORIGIN FOR THE GROUP (A): -48.5439 -15.3345 -8.1510 REMARK 3 T TENSOR REMARK 3 T11: 0.2406 T22: 0.2766 REMARK 3 T33: 0.4025 T12: 0.0062 REMARK 3 T13: -0.0717 T23: -0.0321 REMARK 3 L TENSOR REMARK 3 L11: 1.0725 L22: 2.2373 REMARK 3 L33: 0.4729 L12: -0.9164 REMARK 3 L13: 0.2672 L23: 0.4492 REMARK 3 S TENSOR REMARK 3 S11: 0.0512 S12: 0.2676 S13: -0.4369 REMARK 3 S21: -0.2816 S22: -0.1604 S23: 0.5876 REMARK 3 S31: 0.0270 S32: -0.1100 S33: 0.0838 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6ZF1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1292109290. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-MAR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P13 (MX1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.980202 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : KB MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS V MAR 15, 2019 REMARK 200 DATA SCALING SOFTWARE : XDS V MAR 15, 2019 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34692 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.740 REMARK 200 RESOLUTION RANGE LOW (A) : 19.550 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 7.500 REMARK 200 R MERGE (I) : 0.07524 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.9900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.74 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 0.53640 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.350 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 1.13-2998 REMARK 200 STARTING MODEL: 5FNU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.5 M AMMONIUM SULFATE, 0.1 M SODIUM REMARK 280 CITRATE TRIBASIC DIHYDRATE PH 5.6 AND 1.0 M LITHIUM SULFATE REMARK 280 MONOHYDRATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 18.53767 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 37.07533 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 27.80650 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 46.34417 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 9.26883 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1850 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 321 REMARK 465 PRO A 322 REMARK 465 LYS A 323 REMARK 465 VAL A 324 REMARK 465 CYS A 613 REMARK 465 ARG A 614 REMARK 465 LYS A 615 REMARK 465 GLN A 616 REMARK 465 ILE A 617 REMARK 465 ASP A 618 REMARK 465 GLN A 619 REMARK 465 GLN A 620 REMARK 465 ASN A 621 REMARK 465 CYS A 622 REMARK 465 THR A 623 REMARK 465 CYS A 624 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 336 -37.07 71.93 REMARK 500 THR A 481 -39.51 -131.84 REMARK 500 HIS A 516 -116.96 59.41 REMARK 500 VAL A 547 -169.66 -111.79 REMARK 500 HIS A 575 -38.06 -144.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 705 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 706 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 707 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 708 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 709 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 710 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue QHK A 711 DBREF 6ZF1 A 322 624 UNP Q9Z2X8 KEAP1_MOUSE 322 624 SEQADV 6ZF1 GLY A 321 UNP Q9Z2X8 EXPRESSION TAG SEQRES 1 A 304 GLY PRO LYS VAL GLY ARG LEU ILE TYR THR ALA GLY GLY SEQRES 2 A 304 TYR PHE ARG GLN SER LEU SER TYR LEU GLU ALA TYR ASN SEQRES 3 A 304 PRO SER ASN GLY SER TRP LEU ARG LEU ALA ASP LEU GLN SEQRES 4 A 304 VAL PRO ARG SER GLY LEU ALA GLY CYS VAL VAL GLY GLY SEQRES 5 A 304 LEU LEU TYR ALA VAL GLY GLY ARG ASN ASN SER PRO ASP SEQRES 6 A 304 GLY ASN THR ASP SER SER ALA LEU ASP CYS TYR ASN PRO SEQRES 7 A 304 MET THR ASN GLN TRP SER PRO CYS ALA SER MET SER VAL SEQRES 8 A 304 PRO ARG ASN ARG ILE GLY VAL GLY VAL ILE ASP GLY HIS SEQRES 9 A 304 ILE TYR ALA VAL GLY GLY SER HIS GLY CYS ILE HIS HIS SEQRES 10 A 304 SER SER VAL GLU ARG TYR GLU PRO GLU ARG ASP GLU TRP SEQRES 11 A 304 HIS LEU VAL ALA PRO MET LEU THR ARG ARG ILE GLY VAL SEQRES 12 A 304 GLY VAL ALA VAL LEU ASN ARG LEU LEU TYR ALA VAL GLY SEQRES 13 A 304 GLY PHE ASP GLY THR ASN ARG LEU ASN SER ALA GLU CYS SEQRES 14 A 304 TYR TYR PRO GLU ARG ASN GLU TRP ARG MET ILE THR PRO SEQRES 15 A 304 MET ASN THR ILE ARG SER GLY ALA GLY VAL CYS VAL LEU SEQRES 16 A 304 HIS ASN CYS ILE TYR ALA ALA GLY GLY TYR ASP GLY GLN SEQRES 17 A 304 ASP GLN LEU ASN SER VAL GLU ARG TYR ASP VAL GLU THR SEQRES 18 A 304 GLU THR TRP THR PHE VAL ALA PRO MET ARG HIS HIS ARG SEQRES 19 A 304 SER ALA LEU GLY ILE THR VAL HIS GLN GLY LYS ILE TYR SEQRES 20 A 304 VAL LEU GLY GLY TYR ASP GLY HIS THR PHE LEU ASP SER SEQRES 21 A 304 VAL GLU CYS TYR ASP PRO ASP SER ASP THR TRP SER GLU SEQRES 22 A 304 VAL THR ARG MET THR SER GLY ARG SER GLY VAL GLY VAL SEQRES 23 A 304 ALA VAL THR MET GLU PRO CYS ARG LYS GLN ILE ASP GLN SEQRES 24 A 304 GLN ASN CYS THR CYS HET SO4 A 701 5 HET DMS A 702 10 HET DMS A 703 10 HET DMS A 704 10 HET DMS A 705 10 HET DMS A 706 10 HET DMS A 707 10 HET DMS A 708 10 HET DMS A 709 10 HET DMS A 710 10 HET QHK A 711 48 HETNAM SO4 SULFATE ION HETNAM DMS DIMETHYL SULFOXIDE HETNAM QHK 5-CYCLOPROPYL-1-[3-[2-HYDROXY-2- HETNAM 2 QHK OXOETHYL(PHENYLSULFONYL)AMINO]PHENYL]PYRAZOLE-4- HETNAM 3 QHK CARBOXYLIC ACID FORMUL 2 SO4 O4 S 2- FORMUL 3 DMS 9(C2 H6 O S) FORMUL 12 QHK C21 H19 N3 O6 S FORMUL 13 HOH *126(H2 O) HELIX 1 AA1 PRO A 492 ASN A 495 5 4 SHEET 1 AA1 4 TRP A 352 LEU A 355 0 SHEET 2 AA1 4 LEU A 342 TYR A 345 -1 N LEU A 342 O LEU A 355 SHEET 3 AA1 4 LEU A 327 ALA A 331 -1 N THR A 330 O GLU A 343 SHEET 4 AA1 4 GLY A 605 THR A 609 -1 O ALA A 607 N TYR A 329 SHEET 1 AA2 4 ALA A 366 VAL A 370 0 SHEET 2 AA2 4 LEU A 373 VAL A 377 -1 O TYR A 375 N CYS A 368 SHEET 3 AA2 4 LEU A 393 ASN A 397 -1 O TYR A 396 N LEU A 374 SHEET 4 AA2 4 GLN A 402 PRO A 405 -1 O SER A 404 N CYS A 395 SHEET 1 AA3 2 ARG A 380 SER A 383 0 SHEET 2 AA3 2 GLY A 386 ASP A 389 -1 O GLY A 386 N SER A 383 SHEET 1 AA4 4 GLY A 417 ILE A 421 0 SHEET 2 AA4 4 HIS A 424 VAL A 428 -1 O TYR A 426 N GLY A 419 SHEET 3 AA4 4 VAL A 440 TYR A 443 -1 O GLU A 441 N ALA A 427 SHEET 4 AA4 4 TRP A 450 LEU A 452 -1 O HIS A 451 N ARG A 442 SHEET 1 AA5 2 SER A 431 HIS A 432 0 SHEET 2 AA5 2 ILE A 435 HIS A 436 -1 O ILE A 435 N HIS A 432 SHEET 1 AA6 4 GLY A 464 LEU A 468 0 SHEET 2 AA6 4 LEU A 471 VAL A 475 -1 O VAL A 475 N GLY A 464 SHEET 3 AA6 4 ALA A 487 TYR A 491 -1 O TYR A 490 N LEU A 472 SHEET 4 AA6 4 GLU A 496 ILE A 500 -1 O ARG A 498 N CYS A 489 SHEET 1 AA7 4 GLY A 511 LEU A 515 0 SHEET 2 AA7 4 CYS A 518 ALA A 522 -1 O ALA A 522 N GLY A 511 SHEET 3 AA7 4 VAL A 534 ASP A 538 -1 O GLU A 535 N ALA A 521 SHEET 4 AA7 4 THR A 543 PHE A 546 -1 O THR A 545 N ARG A 536 SHEET 1 AA8 4 GLY A 558 HIS A 562 0 SHEET 2 AA8 4 LYS A 565 LEU A 569 -1 O TYR A 567 N THR A 560 SHEET 3 AA8 4 SER A 580 ASP A 585 -1 O TYR A 584 N ILE A 566 SHEET 4 AA8 4 THR A 590 ARG A 596 -1 O SER A 592 N CYS A 583 SITE 1 AC1 9 ILE A 435 HIS A 437 SER A 438 SER A 439 SITE 2 AC1 9 ARG A 494 HOH A 807 HOH A 815 HOH A 855 SITE 3 AC1 9 HOH A 897 SITE 1 AC2 4 TYR A 525 GLN A 530 SER A 555 QHK A 711 SITE 1 AC3 3 LEU A 452 VAL A 453 ASN A 495 SITE 1 AC4 5 ARG A 354 LEU A 355 ASP A 357 HIS A 552 SITE 2 AC4 5 LEU A 578 SITE 1 AC5 6 SER A 438 MET A 456 LEU A 457 THR A 458 SITE 2 AC5 6 ARG A 459 HOH A 876 SITE 1 AC6 2 ARG A 494 ASN A 495 SITE 1 AC7 2 PRO A 405 HOH A 830 SITE 1 AC8 3 ASP A 479 THR A 481 HOH A 876 SITE 1 AC9 3 CYS A 434 GLU A 540 HOH A 903 SITE 1 AD1 3 GLY A 325 HIS A 562 GLN A 563 SITE 1 AD2 17 TYR A 334 SER A 363 ARG A 380 ASN A 414 SITE 2 AD2 17 ARG A 415 GLY A 462 ARG A 483 SER A 508 SITE 3 AD2 17 TYR A 525 SER A 555 ALA A 556 TYR A 572 SITE 4 AD2 17 PHE A 577 SER A 602 GLY A 603 DMS A 702 SITE 5 AD2 17 HOH A 805 CRYST1 103.430 103.430 55.613 90.00 90.00 120.00 P 61 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009668 0.005582 0.000000 0.00000 SCALE2 0.000000 0.011164 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017981 0.00000