HEADER TRANSFERASE 28-JUN-20 6ZJD TITLE CRYSTAL STRUCTURE OF HUMAN ADENYLATE KINASE 3, AK3, IN COMPLEX WITH TITLE 2 INHIBITOR ATP COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTP:AMP PHOSPHOTRANSFERASE AK3, MITOCHONDRIAL; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ADENYLATE KINASE 3,AK 3,ADENYLATE KINASE 3 ALPHA-LIKE 1; COMPND 5 EC: 2.7.4.10; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: AK3, AK3L1, AK6, AKL3L; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GTP:AMP PHOSPHOTRANSFERASE, GP5A, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR C.GRUNDSTROM,P.ROGNE,M.WOLF-WATZ,A.E.SAUER-ERIKSSON REVDAT 3 31-JAN-24 6ZJD 1 REMARK REVDAT 2 07-OCT-20 6ZJD 1 JRNL REVDAT 1 16-SEP-20 6ZJD 0 JRNL AUTH P.ROGNE,B.DULKO-SMITH,J.GOODMAN,M.ROSSELIN,C.GRUNDSTROM, JRNL AUTH 2 C.HEDBERG,K.NAM,A.E.SAUER-ERIKSSON,M.WOLF-WATZ JRNL TITL STRUCTURAL BASIS FOR GTP VERSUS ATP SELECTIVITY IN THE NMP JRNL TITL 2 KINASE AK3. JRNL REF BIOCHEMISTRY V. 59 3570 2020 JRNL REFN ISSN 0006-2960 JRNL PMID 32822537 JRNL DOI 10.1021/ACS.BIOCHEM.0C00549 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.86 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.8 REMARK 3 NUMBER OF REFLECTIONS : 45601 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.160 REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 2289 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 26.8560 - 4.4039 0.98 2870 148 0.1497 0.1871 REMARK 3 2 4.4039 - 3.4980 1.00 2906 154 0.1281 0.1774 REMARK 3 3 3.4980 - 3.0565 1.00 2915 155 0.1409 0.2055 REMARK 3 4 3.0565 - 2.7774 1.00 2923 154 0.1548 0.2366 REMARK 3 5 2.7774 - 2.5785 1.00 2909 153 0.1563 0.2513 REMARK 3 6 2.5785 - 2.4265 0.99 2911 155 0.1579 0.2422 REMARK 3 7 2.4265 - 2.3051 0.97 2842 147 0.1523 0.2252 REMARK 3 8 2.3051 - 2.2048 0.95 2768 147 0.1544 0.1991 REMARK 3 9 2.2048 - 2.1200 0.94 2743 145 0.1552 0.2281 REMARK 3 10 2.1200 - 2.0468 0.93 2704 143 0.1520 0.2567 REMARK 3 11 2.0468 - 1.9829 0.91 2647 135 0.1703 0.2005 REMARK 3 12 1.9829 - 1.9262 0.90 2593 142 0.1754 0.2366 REMARK 3 13 1.9262 - 1.8755 0.87 2542 130 0.1834 0.2317 REMARK 3 14 1.8755 - 1.8297 0.85 2514 138 0.2112 0.2640 REMARK 3 15 1.8297 - 1.7882 0.81 2312 121 0.2433 0.2931 REMARK 3 16 1.7882 - 1.7501 0.75 2213 122 0.2830 0.3212 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.350 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6ZJD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1292109651. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-MAR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR-H REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRUKER PLATINUM 135 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45601 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 26.856 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 22.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.9 REMARK 200 DATA REDUNDANCY IN SHELL : 1.90 REMARK 200 R MERGE FOR SHELL (I) : 0.42000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1ZD8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PURIFIED HAK3 WAS DIALYZED AGAINST 30 REMARK 280 MM MOPS BUFFER WITH 50 MM NACL PH 7.0 AND CONCENTRATED TO 15-20 REMARK 280 MG PER ML. THE RESEVOIR CONTAINED 0.2 M MGCL2, 0.1 M TRIS PH 8.0 REMARK 280 AND 20% PEG 6000. DROP SIZE 1 PLUS 1 MICROLITER. CRYO PROTECTION REMARK 280 30% PEG6000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 31.25900 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1600 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -56.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 ALA A 3 REMARK 465 SER A 4 REMARK 465 ALA A 5 REMARK 465 SER A 220 REMARK 465 GLN A 221 REMARK 465 LYS A 222 REMARK 465 ALA A 223 REMARK 465 SER A 224 REMARK 465 VAL A 225 REMARK 465 THR A 226 REMARK 465 PRO A 227 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 6 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 143 75.97 -151.02 REMARK 500 ASN A 143 62.89 -156.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 810 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH A 811 DISTANCE = 5.90 ANGSTROMS REMARK 525 HOH A 812 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH A 813 DISTANCE = 6.03 ANGSTROMS REMARK 525 HOH A 814 DISTANCE = 6.14 ANGSTROMS REMARK 525 HOH A 815 DISTANCE = 6.32 ANGSTROMS REMARK 525 HOH A 816 DISTANCE = 6.33 ANGSTROMS REMARK 525 HOH A 817 DISTANCE = 6.42 ANGSTROMS REMARK 525 HOH A 818 DISTANCE = 6.66 ANGSTROMS REMARK 525 HOH A 819 DISTANCE = 6.96 ANGSTROMS REMARK 525 HOH A 820 DISTANCE = 9.19 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 304 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 40 OD1 REMARK 620 2 ASP A 40 OD2 46.6 REMARK 620 3 HOH A 432 O 98.5 57.6 REMARK 620 4 HOH A 440 O 90.2 91.1 118.5 REMARK 620 5 HOH A 575 O 79.2 79.2 60.6 168.9 REMARK 620 6 HOH A 657 O 71.4 109.8 117.8 122.6 57.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 308 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 40 OD2 REMARK 620 2 HOH A 521 O 104.8 REMARK 620 3 HOH A 534 O 105.2 123.6 REMARK 620 4 HOH A 579 O 96.1 107.6 115.3 REMARK 620 5 HOH A 748 O 149.9 76.9 98.0 56.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 303 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 143 OD1 REMARK 620 2 HOH A 449 O 105.3 REMARK 620 3 HOH A 461 O 71.8 89.7 REMARK 620 4 HOH A 586 O 71.3 107.9 142.1 REMARK 620 5 HOH A 799 O 75.4 169.9 100.0 62.5 REMARK 620 6 HOH A 799 O 83.7 143.9 59.3 108.1 46.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ATP A 301 O3G REMARK 620 2 ATP A 301 O2B 83.9 REMARK 620 3 HOH A 466 O 90.9 139.6 REMARK 620 4 HOH A 572 O 157.7 77.5 95.3 REMARK 620 5 HOH A 574 O 114.5 158.5 55.2 86.3 REMARK 620 6 HOH A 703 O 108.2 94.1 125.2 85.6 70.3 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ATP A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 308 DBREF 6ZJD A 1 227 UNP Q9UIJ7 KAD3_HUMAN 1 227 SEQRES 1 A 227 MET GLY ALA SER ALA ARG LEU LEU ARG ALA VAL ILE MET SEQRES 2 A 227 GLY ALA PRO GLY SER GLY LYS GLY THR VAL SER SER ARG SEQRES 3 A 227 ILE THR THR HIS PHE GLU LEU LYS HIS LEU SER SER GLY SEQRES 4 A 227 ASP LEU LEU ARG ASP ASN MET LEU ARG GLY THR GLU ILE SEQRES 5 A 227 GLY VAL LEU ALA LYS ALA PHE ILE ASP GLN GLY LYS LEU SEQRES 6 A 227 ILE PRO ASP ASP VAL MET THR ARG LEU ALA LEU HIS GLU SEQRES 7 A 227 LEU LYS ASN LEU THR GLN TYR SER TRP LEU LEU ASP GLY SEQRES 8 A 227 PHE PRO ARG THR LEU PRO GLN ALA GLU ALA LEU ASP ARG SEQRES 9 A 227 ALA TYR GLN ILE ASP THR VAL ILE ASN LEU ASN VAL PRO SEQRES 10 A 227 PHE GLU VAL ILE LYS GLN ARG LEU THR ALA ARG TRP ILE SEQRES 11 A 227 HIS PRO ALA SER GLY ARG VAL TYR ASN ILE GLU PHE ASN SEQRES 12 A 227 PRO PRO LYS THR VAL GLY ILE ASP ASP LEU THR GLY GLU SEQRES 13 A 227 PRO LEU ILE GLN ARG GLU ASP ASP LYS PRO GLU THR VAL SEQRES 14 A 227 ILE LYS ARG LEU LYS ALA TYR GLU ASP GLN THR LYS PRO SEQRES 15 A 227 VAL LEU GLU TYR TYR GLN LYS LYS GLY VAL LEU GLU THR SEQRES 16 A 227 PHE SER GLY THR GLU THR ASN LYS ILE TRP PRO TYR VAL SEQRES 17 A 227 TYR ALA PHE LEU GLN THR LYS VAL PRO GLN ARG SER GLN SEQRES 18 A 227 LYS ALA SER VAL THR PRO HET ATP A 301 62 HET MG A 302 1 HET MG A 303 1 HET NA A 304 1 HET CL A 305 1 HET CL A 306 1 HET CL A 307 1 HET NA A 308 1 HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM NA SODIUM ION HETNAM CL CHLORIDE ION FORMUL 2 ATP C10 H16 N5 O13 P3 FORMUL 3 MG 2(MG 2+) FORMUL 5 NA 2(NA 1+) FORMUL 6 CL 3(CL 1-) FORMUL 10 HOH *420(H2 O) HELIX 1 AA1 GLY A 19 PHE A 31 1 13 HELIX 2 AA2 SER A 38 GLY A 49 1 12 HELIX 3 AA3 THR A 50 ASP A 61 1 12 HELIX 4 AA4 PRO A 67 ASN A 81 1 15 HELIX 5 AA5 THR A 95 ARG A 104 1 10 HELIX 6 AA6 PRO A 117 THR A 126 1 10 HELIX 7 AA7 ARG A 161 ASP A 164 5 4 HELIX 8 AA8 LYS A 165 LYS A 190 1 26 HELIX 9 AA9 GLU A 200 THR A 214 1 15 SHEET 1 AA1 5 LYS A 34 SER A 37 0 SHEET 2 AA1 5 TRP A 87 ASP A 90 1 O ASP A 90 N LEU A 36 SHEET 3 AA1 5 ARG A 9 GLY A 14 1 N ALA A 10 O LEU A 89 SHEET 4 AA1 5 THR A 110 ASN A 115 1 O ILE A 112 N MET A 13 SHEET 5 AA1 5 LEU A 193 SER A 197 1 O GLU A 194 N VAL A 111 SHEET 1 AA2 2 ARG A 128 HIS A 131 0 SHEET 2 AA2 2 ARG A 136 ASN A 139 -1 O TYR A 138 N TRP A 129 LINK OD1 ASP A 40 NA NA A 304 1555 1555 2.53 LINK OD2 ASP A 40 NA NA A 304 1555 1555 2.92 LINK OD2 ASP A 40 NA NA A 308 1555 1555 2.07 LINK OD1BASN A 143 MG MG A 303 1555 1555 2.49 LINK O3GAATP A 301 MG A MG A 302 1555 1555 2.10 LINK O2BAATP A 301 MG A MG A 302 1555 1555 2.34 LINK MG A MG A 302 O HOH A 466 1555 1555 2.79 LINK MG A MG A 302 O AHOH A 572 1555 2645 2.97 LINK MG A MG A 302 O HOH A 574 1555 1555 2.56 LINK MG A MG A 302 O AHOH A 703 1555 1555 2.89 LINK MG MG A 303 O HOH A 449 1555 1555 2.57 LINK MG MG A 303 O HOH A 461 1555 1555 1.91 LINK MG MG A 303 O HOH A 586 1555 1555 2.47 LINK MG MG A 303 O AHOH A 799 1555 1555 2.33 LINK MG MG A 303 O BHOH A 799 1555 1555 2.74 LINK NA NA A 304 O HOH A 432 1555 1555 2.23 LINK NA NA A 304 O HOH A 440 1555 1555 3.12 LINK NA NA A 304 O HOH A 575 1555 2645 2.86 LINK NA NA A 304 O HOH A 657 1555 2645 3.19 LINK NA NA A 308 O HOH A 521 1555 1555 2.54 LINK NA NA A 308 O HOH A 534 1555 1555 2.64 LINK NA NA A 308 O HOH A 579 1555 2645 2.92 LINK NA NA A 308 O HOH A 748 1555 1555 2.46 CISPEP 1 PHE A 92 PRO A 93 0 -0.36 SITE 1 AC1 25 PRO A 16 SER A 38 GLY A 39 LEU A 42 SITE 2 AC1 25 ARG A 43 LYS A 64 LEU A 65 ILE A 66 SITE 3 AC1 25 MET A 71 GLY A 91 ARG A 94 GLN A 98 SITE 4 AC1 25 ARG A 172 MG A 302 HOH A 409 HOH A 411 SITE 5 AC1 25 HOH A 431 HOH A 437 HOH A 466 HOH A 494 SITE 6 AC1 25 HOH A 499 HOH A 535 HOH A 540 HOH A 555 SITE 7 AC1 25 HOH A 703 SITE 1 AC2 4 ATP A 301 HOH A 466 HOH A 574 HOH A 703 SITE 1 AC3 5 ASN A 143 HOH A 449 HOH A 461 HOH A 586 SITE 2 AC3 5 HOH A 799 SITE 1 AC4 2 ASP A 40 HOH A 432 SITE 1 AC5 4 LEU A 33 HOH A 429 HOH A 456 HOH A 593 SITE 1 AC6 5 GLY A 17 GLY A 19 LYS A 20 GLY A 21 SITE 2 AC6 5 HOH A 540 SITE 1 AC7 3 ARG A 128 ASN A 139 HOH A 754 SITE 1 AC8 4 ASP A 40 HOH A 521 HOH A 534 HOH A 748 CRYST1 42.524 62.518 49.804 90.00 108.20 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023516 0.000000 0.007734 0.00000 SCALE2 0.000000 0.015995 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021137 0.00000