HEADER CELL CYCLE 01-JUL-20 6ZLX TITLE THE STRUCTURE OF THE CLPX-ASSOCIATED FACTOR PDIP38 COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYMERASE DELTA-INTERACTING PROTEIN 2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 38 KDA DNA POLYMERASE DELTA INTERACTION PROTEIN,P38; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: POLDIP2, PDIP38, POLD4, HSPC017; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CLPX, PDIP38, ACTIVATOR OF HUMAN CLPXP, CELL CYCLE EXPDTA X-RAY DIFFRACTION AUTHOR K.ZETH,D.DOUGAN REVDAT 1 14-JUL-21 6ZLX 0 JRNL AUTH P.STRACK,E.BRODIE,H.ZHAN,V.SCHUENEMANN,T.SAIYED,K.ZETH, JRNL AUTH 2 K.TRUSCOTT,D.DOUGAN JRNL TITL PDIP38 IS A NOVEL ADAPTOR-LIKE MODULATOR OF THE JRNL TITL 2 MITOCHONDRIAL AAA+ PROTEASE CLPXP JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.39 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.14_3260: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.39 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.31 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.390 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 5690 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.249 REMARK 3 R VALUE (WORKING SET) : 0.247 REMARK 3 FREE R VALUE : 0.287 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 285 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.3000 - 4.2757 1.00 2740 145 0.2353 0.2741 REMARK 3 2 4.2757 - 3.3943 1.00 2665 140 0.2864 0.3314 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.370 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.050 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 2030 REMARK 3 ANGLE : 0.533 2757 REMARK 3 CHIRALITY : 0.042 289 REMARK 3 PLANARITY : 0.003 357 REMARK 3 DIHEDRAL : 14.599 1184 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 68 THROUGH 105 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.1894 -39.7686 -0.9605 REMARK 3 T TENSOR REMARK 3 T11: 0.8386 T22: 1.4810 REMARK 3 T33: 1.4313 T12: -0.1099 REMARK 3 T13: -0.1513 T23: -0.0490 REMARK 3 L TENSOR REMARK 3 L11: 4.5105 L22: 9.6747 REMARK 3 L33: 6.6049 L12: -0.1971 REMARK 3 L13: 5.4304 L23: -0.0753 REMARK 3 S TENSOR REMARK 3 S11: -0.2822 S12: 0.0510 S13: 0.3710 REMARK 3 S21: 1.0272 S22: -0.5270 S23: -0.3243 REMARK 3 S31: -1.6376 S32: 0.5883 S33: 1.2491 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 106 THROUGH 138 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.6211 -45.7930 3.5031 REMARK 3 T TENSOR REMARK 3 T11: 0.9715 T22: 1.4781 REMARK 3 T33: 2.1894 T12: 0.0375 REMARK 3 T13: 0.0485 T23: 0.0246 REMARK 3 L TENSOR REMARK 3 L11: 6.8309 L22: 4.8016 REMARK 3 L33: 6.3589 L12: -1.8623 REMARK 3 L13: 6.5264 L23: -1.9253 REMARK 3 S TENSOR REMARK 3 S11: -0.4242 S12: -0.8521 S13: 2.1772 REMARK 3 S21: 0.2007 S22: -1.9377 S23: -0.4340 REMARK 3 S31: -0.7630 S32: 2.3655 S33: -0.1526 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 139 THROUGH 182 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.8261 -37.9183 -0.7166 REMARK 3 T TENSOR REMARK 3 T11: 0.9778 T22: 1.2262 REMARK 3 T33: 1.3607 T12: -0.0244 REMARK 3 T13: -0.1437 T23: -0.1105 REMARK 3 L TENSOR REMARK 3 L11: 5.3280 L22: 5.0513 REMARK 3 L33: 3.3526 L12: 2.1848 REMARK 3 L13: -3.1792 L23: 1.1691 REMARK 3 S TENSOR REMARK 3 S11: -0.7749 S12: 0.9621 S13: -2.8540 REMARK 3 S21: -1.0103 S22: -0.4758 S23: -1.1840 REMARK 3 S31: -0.2551 S32: -0.0967 S33: 0.7938 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 183 THROUGH 199 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.4192 -34.3902 -15.9030 REMARK 3 T TENSOR REMARK 3 T11: 1.3503 T22: 3.0660 REMARK 3 T33: 2.1037 T12: 1.4592 REMARK 3 T13: 0.7326 T23: 0.9027 REMARK 3 L TENSOR REMARK 3 L11: 8.5749 L22: 2.2900 REMARK 3 L33: 0.8417 L12: 0.8725 REMARK 3 L13: -2.5779 L23: 0.1121 REMARK 3 S TENSOR REMARK 3 S11: 1.7295 S12: 2.9171 S13: 1.6492 REMARK 3 S21: -3.2963 S22: -2.2518 S23: -2.1210 REMARK 3 S31: 1.2547 S32: 2.6606 S33: -3.0181 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 200 THROUGH 213 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.1550 -39.3525 -17.5199 REMARK 3 T TENSOR REMARK 3 T11: 0.9664 T22: 1.2731 REMARK 3 T33: 2.3971 T12: 0.5323 REMARK 3 T13: -0.2717 T23: 0.6812 REMARK 3 L TENSOR REMARK 3 L11: 1.9979 L22: 2.0013 REMARK 3 L33: 8.2465 L12: -7.4404 REMARK 3 L13: 2.2607 L23: 5.9348 REMARK 3 S TENSOR REMARK 3 S11: 0.3352 S12: 1.2202 S13: 3.7198 REMARK 3 S21: -1.5404 S22: -0.8670 S23: -3.3127 REMARK 3 S31: -2.5431 S32: -0.3135 S33: 0.7162 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 214 THROUGH 239 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.4414 -50.3596 -1.0943 REMARK 3 T TENSOR REMARK 3 T11: 0.9031 T22: 0.4363 REMARK 3 T33: 1.4665 T12: -0.2484 REMARK 3 T13: 0.0969 T23: -0.0778 REMARK 3 L TENSOR REMARK 3 L11: 7.6404 L22: 1.8648 REMARK 3 L33: 8.3140 L12: -1.1020 REMARK 3 L13: 2.7000 L23: 0.8392 REMARK 3 S TENSOR REMARK 3 S11: 0.1893 S12: -1.2182 S13: -2.1580 REMARK 3 S21: -0.1176 S22: 0.6325 S23: 0.4902 REMARK 3 S31: 0.8216 S32: -0.6617 S33: 0.1298 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 240 THROUGH 258 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.5717 -54.2721 -0.3296 REMARK 3 T TENSOR REMARK 3 T11: 0.8310 T22: 0.7602 REMARK 3 T33: 0.8376 T12: -0.2110 REMARK 3 T13: 0.0108 T23: 0.0717 REMARK 3 L TENSOR REMARK 3 L11: 9.6939 L22: 8.6092 REMARK 3 L33: 2.7354 L12: -4.5266 REMARK 3 L13: -1.4765 L23: -0.0629 REMARK 3 S TENSOR REMARK 3 S11: -0.2599 S12: 0.1680 S13: -1.1425 REMARK 3 S21: -2.6978 S22: 0.1727 S23: 1.8490 REMARK 3 S31: -0.4551 S32: 0.2255 S33: -1.1085 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 259 THROUGH 312 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.1811 -41.6961 10.5716 REMARK 3 T TENSOR REMARK 3 T11: 0.5651 T22: 1.1381 REMARK 3 T33: 1.5460 T12: -0.0543 REMARK 3 T13: 0.0418 T23: -0.0594 REMARK 3 L TENSOR REMARK 3 L11: 2.7590 L22: 8.1979 REMARK 3 L33: 6.0620 L12: -0.7069 REMARK 3 L13: -0.3060 L23: 1.0747 REMARK 3 S TENSOR REMARK 3 S11: 0.1599 S12: -0.2529 S13: 0.0408 REMARK 3 S21: -0.0522 S22: -0.2901 S23: -0.3861 REMARK 3 S31: -0.1933 S32: -0.0407 S33: 0.0933 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 313 THROUGH 358 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.3864 -47.3170 11.3409 REMARK 3 T TENSOR REMARK 3 T11: 0.8292 T22: 1.4478 REMARK 3 T33: 1.2441 T12: 0.1166 REMARK 3 T13: 0.0986 T23: -0.0798 REMARK 3 L TENSOR REMARK 3 L11: 5.9092 L22: 7.6002 REMARK 3 L33: 3.5632 L12: -3.2015 REMARK 3 L13: -4.1653 L23: 0.1974 REMARK 3 S TENSOR REMARK 3 S11: -0.3866 S12: -0.7199 S13: -0.9501 REMARK 3 S21: 0.3509 S22: -0.2217 S23: 1.0879 REMARK 3 S31: -0.0590 S32: 0.0482 S33: 0.8862 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6ZLX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-JUL-20. REMARK 100 THE DEPOSITION ID IS D_1292109757. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JAN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.07 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10813 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.390 REMARK 200 RESOLUTION RANGE LOW (A) : 39.310 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 11.00 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.39 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.60 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 8000, BATCH MODE, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 32.39067 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 16.19533 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 32.39067 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 16.19533 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -46.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 107A REMARK 465 ALA A 107B REMARK 465 SER A 107C REMARK 465 ALA A 107D REMARK 465 ALA A 107E REMARK 465 PRO A 107F REMARK 465 GLU A 107G REMARK 465 LYS A 107H REMARK 465 ALA A 107I REMARK 465 GLU A 107J REMARK 465 ASN A 107K REMARK 465 PRO A 107L REMARK 465 ALA A 107M REMARK 465 GLY A 107N REMARK 465 HIS A 107O REMARK 465 GLY A 107P REMARK 465 SER A 107Q REMARK 465 LYS A 107R REMARK 465 GLU A 107S REMARK 465 VAL A 107T REMARK 465 LYS A 107U REMARK 465 ASP A 141A REMARK 465 CYS A 141B REMARK 465 PRO A 141C REMARK 465 HIS A 141D REMARK 465 ILE A 141E REMARK 465 SER A 141F REMARK 465 GLN A 141G REMARK 465 ARG A 141H REMARK 465 SER A 141I REMARK 465 GLN A 141J REMARK 465 THR A 141K REMARK 465 GLU A 141L REMARK 465 ALA A 141M REMARK 465 VAL A 141N REMARK 465 THR A 141O REMARK 465 PHE A 141P REMARK 465 LEU A 141Q REMARK 465 ALA A 141R REMARK 465 ASN A 141S REMARK 465 HIS A 141T REMARK 465 ASP A 141U REMARK 465 ASP A 141V REMARK 465 SER A 141W REMARK 465 ARG A 141X REMARK 465 ALA A 141Y REMARK 465 LEU A 141Z REMARK 465 TYR A 142A REMARK 465 ALA A 142B REMARK 465 ILE A 142C REMARK 465 PRO A 142D REMARK 465 GLY A 142E REMARK 465 LEU A 142F REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 74 CG CD OE1 NE2 REMARK 470 LYS A 129 CG CD CE NZ REMARK 470 ARG A 141 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 193 CG ND1 CD2 CE1 NE2 REMARK 470 TYR A 202 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 TYR A 260 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG A 263 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 296 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 75 85.97 -153.59 REMARK 500 PHE A 89 67.97 37.88 REMARK 500 ILE A 191 -158.47 -80.60 REMARK 500 TYR A 202 -176.12 -64.73 REMARK 500 GLN A 204 -145.23 -140.92 REMARK 500 ASN A 256 -52.87 69.42 REMARK 500 GLN A 311 74.29 55.10 REMARK 500 ALA A 324 -8.18 64.66 REMARK 500 ASN A 355 71.41 58.92 REMARK 500 LYS A 356 74.61 51.85 REMARK 500 REMARK 500 REMARK: NULL DBREF 6ZLX A 68 358 UNP Q9Y2S7 PDIP2_HUMAN 67 359 SEQRES 1 A 293 VAL PHE GLU VAL PRO LYS GLN ASN GLY LYS TYR GLU THR SEQRES 2 A 293 GLY GLN LEU PHE LEU HIS SER ILE PHE GLY TYR ARG GLY SEQRES 3 A 293 VAL VAL LEU PHE PRO TRP GLN ALA ARG LEU TYR ASP ARG SEQRES 4 A 293 ASP VAL ALA SER ALA ALA PRO GLU LYS ALA GLU ASN PRO SEQRES 5 A 293 ALA GLY HIS GLY SER LYS GLU VAL LYS GLY LYS THR HIS SEQRES 6 A 293 THR TYR TYR GLN VAL LEU ILE ASP ALA ARG ASP CYS PRO SEQRES 7 A 293 HIS ILE SER GLN ARG SER GLN THR GLU ALA VAL THR PHE SEQRES 8 A 293 LEU ALA ASN HIS ASP ASP SER ARG ALA LEU TYR ALA ILE SEQRES 9 A 293 PRO GLY LEU ASP TYR VAL SER HIS GLU ASP ILE LEU PRO SEQRES 10 A 293 TYR THR SER THR ASP GLN VAL PRO ILE GLN HIS GLU LEU SEQRES 11 A 293 PHE GLU ARG PHE LEU LEU TYR ASP GLN THR LYS ALA PRO SEQRES 12 A 293 PRO PHE VAL ALA ARG GLU THR LEU ARG ALA TRP GLN GLU SEQRES 13 A 293 LYS ASN HIS PRO TRP LEU GLU LEU SER ASP VAL HIS ARG SEQRES 14 A 293 GLU THR THR GLU ASN ILE ARG VAL THR VAL ILE PRO PHE SEQRES 15 A 293 TYR MET GLY MET ARG GLU ALA GLN ASN SER HIS VAL TYR SEQRES 16 A 293 TRP TRP ARG TYR CYS ILE ARG LEU GLU ASN LEU ASP SER SEQRES 17 A 293 ASP VAL VAL GLN LEU ARG GLU ARG HIS TRP ARG ILE PHE SEQRES 18 A 293 SER LEU SER GLY THR LEU GLU THR VAL ARG GLY ARG GLY SEQRES 19 A 293 VAL VAL GLY ARG GLU PRO VAL LEU SER LYS GLU GLN PRO SEQRES 20 A 293 ALA PHE GLN TYR SER SER HIS VAL SER LEU GLN ALA SER SEQRES 21 A 293 SER GLY HIS MET TRP GLY THR PHE ARG PHE GLU ARG PRO SEQRES 22 A 293 ASP GLY SER HIS PHE ASP VAL ARG ILE PRO PRO PHE SER SEQRES 23 A 293 LEU GLU SER ASN LYS ASP GLU HET PT A 401 1 HET PT A 402 1 HETNAM PT PLATINUM (II) ION FORMUL 2 PT 2(PT 2+) HELIX 1 AA1 GLN A 192 PHE A 199 1 8 HELIX 2 AA2 ARG A 213 GLU A 228 1 16 SHEET 1 AA1 5 TYR A 174 SER A 176 0 SHEET 2 AA1 5 THR A 130 ILE A 138 -1 N TYR A 134 O VAL A 175 SHEET 3 AA1 5 ARG A 92 ASP A 105 -1 N ALA A 101 O HIS A 131 SHEET 4 AA1 5 LEU A 83 HIS A 86 -1 N PHE A 84 O GLY A 93 SHEET 5 AA1 5 ILE A 180 PRO A 182 -1 O LEU A 181 N LEU A 85 SHEET 1 AA2 7 TYR A 174 SER A 176 0 SHEET 2 AA2 7 THR A 130 ILE A 138 -1 N TYR A 134 O VAL A 175 SHEET 3 AA2 7 ARG A 92 ASP A 105 -1 N ALA A 101 O HIS A 131 SHEET 4 AA2 7 ASP A 231 THR A 236 1 O ARG A 234 N TYR A 104 SHEET 5 AA2 7 ILE A 240 MET A 249 -1 O VAL A 244 N HIS A 233 SHEET 6 AA2 7 VAL A 259 ASN A 270 -1 O CYS A 265 N ILE A 245 SHEET 7 AA2 7 ALA A 313 GLN A 323 -1 O PHE A 314 N LEU A 268 SHEET 1 AA3 2 LEU A 200 ASP A 203 0 SHEET 2 AA3 2 PHE A 210 ALA A 212 -1 O VAL A 211 N LEU A 201 SHEET 1 AA4 3 LEU A 292 ARG A 298 0 SHEET 2 AA4 3 VAL A 276 SER A 287 -1 N ILE A 285 O GLU A 293 SHEET 3 AA4 3 VAL A 306 LEU A 307 -1 O LEU A 307 N VAL A 276 SHEET 1 AA5 4 LEU A 292 ARG A 298 0 SHEET 2 AA5 4 VAL A 276 SER A 287 -1 N ILE A 285 O GLU A 293 SHEET 3 AA5 4 GLY A 327 GLU A 336 -1 O ARG A 334 N GLU A 280 SHEET 4 AA5 4 HIS A 342 SER A 351 -1 O PHE A 350 N MET A 329 LINK SG CYS A 265 PT PT A 402 1555 1555 2.66 CRYST1 120.095 120.095 48.586 90.00 90.00 120.00 P 62 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008327 0.004807 0.000000 0.00000 SCALE2 0.000000 0.009615 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020582 0.00000