HEADER MEMBRANE PROTEIN 03-JUL-20 6ZMQ TITLE CYTOCHROME C HEME LYASE CCMF COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME C-TYPE BIOGENESIS PROTEIN CCMF; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS (STRAIN HB27 / ATCC BAA- SOURCE 3 163 / DSM 7039); SOURCE 4 ORGANISM_TAXID: 262724; SOURCE 5 STRAIN: HB27 / ATCC BAA-163 / DSM 7039; SOURCE 6 GENE: CCMF, TT_C1038; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HEME LYASE CYTOCHROME C MATURATION MEMBRANE PROTEIN CYTOCHROME, KEYWDS 2 MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.BRAUSEMANN,O.EINSLE REVDAT 3 15-MAY-24 6ZMQ 1 REMARK REVDAT 2 07-JUL-21 6ZMQ 1 JRNL REVDAT 1 19-MAY-21 6ZMQ 0 JRNL AUTH A.BRAUSEMANN,L.ZHANG,L.ILCU,O.EINSLE JRNL TITL ARCHITECTURE OF THE MEMBRANE-BOUND CYTOCHROME C HEME LYASE JRNL TITL 2 CCMF. JRNL REF NAT.CHEM.BIOL. V. 17 800 2021 JRNL REFN ESSN 1552-4469 JRNL PMID 33958791 JRNL DOI 10.1038/S41589-021-00793-8 REMARK 2 REMARK 2 RESOLUTION. 2.67 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.67 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.15 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.920 REMARK 3 COMPLETENESS FOR RANGE (%) : 44.2 REMARK 3 NUMBER OF REFLECTIONS : 15576 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.273 REMARK 3 R VALUE (WORKING SET) : 0.271 REMARK 3 FREE R VALUE : 0.309 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 1487 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.1500 - 5.9200 0.98 5602 274 0.2595 0.2834 REMARK 3 2 5.9200 - 4.7000 0.95 5379 283 0.2681 0.3106 REMARK 3 3 4.7000 - 4.1100 0.81 4583 250 0.2291 0.2957 REMARK 3 4 4.1100 - 3.7300 0.66 3702 216 0.2837 0.2965 REMARK 3 5 3.7300 - 3.4700 0.49 2807 147 0.3154 0.3335 REMARK 3 6 3.4700 - 3.2600 0.38 2156 136 0.3596 0.4383 REMARK 3 7 3.2600 - 3.1000 0.29 1648 75 0.3705 0.4510 REMARK 3 8 3.1000 - 2.9600 0.17 943 70 0.3924 0.3375 REMARK 3 9 2.9600 - 2.8500 0.07 404 14 0.4332 0.5845 REMARK 3 10 2.8500 - 2.7500 0.04 238 14 0.3675 0.1993 REMARK 3 11 2.7500 - 2.6700 0.02 126 8 0.4881 0.4032 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.440 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 41.740 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 61.38 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -40.7078 4.3014 142.1150 REMARK 3 T TENSOR REMARK 3 T11: 0.3155 T22: 0.1331 REMARK 3 T33: 0.2863 T12: -0.0591 REMARK 3 T13: -0.0029 T23: 0.0474 REMARK 3 L TENSOR REMARK 3 L11: 1.1731 L22: 0.2384 REMARK 3 L33: 0.8942 L12: -0.0495 REMARK 3 L13: -0.1158 L23: 0.4493 REMARK 3 S TENSOR REMARK 3 S11: 0.0478 S12: 0.0479 S13: -0.0156 REMARK 3 S21: -0.1193 S22: 0.0296 S23: -0.0122 REMARK 3 S31: -0.0649 S32: 0.0757 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6ZMQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-JUL-20. REMARK 100 THE DEPOSITION ID IS D_1292109817. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-MAY-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.2-6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15589 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.670 REMARK 200 RESOLUTION RANGE LOW (A) : 92.980 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.4 REMARK 200 DATA REDUNDANCY : 26.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.67 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 58.9 REMARK 200 DATA REDUNDANCY IN SHELL : 23.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: PLATES REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 75.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18-19 % (V/V) LOW MOLECULAR WEIGHT REMARK 280 POLYETHYLENE GLYCOLS (PEG 400, PEG 550 MME, PEG 600, PEG 1000), REMARK 280 0.1 M BISTRIS PH 6.5, 150 MM MGCL2, 4 % (V/V) TRIFLUORETHANOL, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.36000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.49000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 64.13500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 67.49000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.36000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 64.13500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TRP A -16 REMARK 465 SER A -15 REMARK 465 HIS A -14 REMARK 465 PRO A -13 REMARK 465 GLN A -12 REMARK 465 PHE A -11 REMARK 465 GLU A -10 REMARK 465 LEU A 149 REMARK 465 PRO A 150 REMARK 465 ASP A 151 REMARK 465 PRO A 152 REMARK 465 PRO A 153 REMARK 465 PRO A 154 REMARK 465 ASP A 155 REMARK 465 GLY A 156 REMARK 465 VAL A 157 REMARK 465 GLY A 158 REMARK 465 PRO A 159 REMARK 465 ASN A 160 REMARK 465 PRO A 161 REMARK 465 LEU A 162 REMARK 465 GLY A 295 REMARK 465 ILE A 296 REMARK 465 ILE A 297 REMARK 465 GLN A 298 REMARK 465 SER A 299 REMARK 465 VAL A 300 REMARK 465 HIS A 301 REMARK 465 ALA A 302 REMARK 465 PHE A 303 REMARK 465 ALA A 304 REMARK 465 GLU A 305 REMARK 465 SER A 331 REMARK 465 ARG A 332 REMARK 465 GLU A 333 REMARK 465 VAL A 334 REMARK 465 ARG A 335 REMARK 465 ASP A 336 REMARK 465 ALA A 337 REMARK 465 ALA A 338 REMARK 465 LEU A 339 REMARK 465 PHE A 340 REMARK 465 ALA A 375 REMARK 465 PHE A 376 REMARK 465 THR A 377 REMARK 465 GLY A 378 REMARK 465 ALA A 379 REMARK 465 LYS A 380 REMARK 465 VAL A 381 REMARK 465 SER A 382 REMARK 465 VAL A 383 REMARK 465 VAL A 471 REMARK 465 ARG A 472 REMARK 465 ALA A 473 REMARK 465 GLY A 474 REMARK 465 LEU A 475 REMARK 465 SER A 476 REMARK 465 PRO A 477 REMARK 465 ALA A 631 REMARK 465 ALA A 632 REMARK 465 ARG A 633 REMARK 465 PRO A 634 REMARK 465 GLU A 635 REMARK 465 GLU A 636 REMARK 465 ALA A 637 REMARK 465 ARG A 638 REMARK 465 GLY A 639 REMARK 465 VAL A 640 REMARK 465 SER A 641 REMARK 465 PRO A 642 REMARK 465 ALA A 643 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLY A 541 N ARG A 543 2.09 REMARK 500 OH TYR A 586 CG1 VAL A 606 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PRO A 566 N PRO A 566 CA 0.202 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 9 CA - CB - CG ANGL. DEV. = 15.3 DEGREES REMARK 500 LEU A 22 CA - CB - CG ANGL. DEV. = 17.6 DEGREES REMARK 500 LEU A 163 CA - CB - CG ANGL. DEV. = 14.4 DEGREES REMARK 500 PRO A 566 C - N - CA ANGL. DEV. = 16.5 DEGREES REMARK 500 PRO A 566 CA - N - CD ANGL. DEV. = -9.1 DEGREES REMARK 500 PRO A 566 N - CA - C ANGL. DEV. = -26.2 DEGREES REMARK 500 ILE A 578 CG1 - CB - CG2 ANGL. DEV. = -13.7 DEGREES REMARK 500 TYR A 585 CB - CA - C ANGL. DEV. = -12.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 89 5.23 -64.42 REMARK 500 ARG A 113 33.78 -82.41 REMARK 500 PHE A 146 68.67 -102.03 REMARK 500 GLN A 164 -155.40 -110.55 REMARK 500 ASN A 165 28.94 -149.64 REMARK 500 ARG A 267 -9.55 -145.66 REMARK 500 ARG A 412 62.93 38.93 REMARK 500 VAL A 418 -71.51 -94.05 REMARK 500 ARG A 439 -166.88 -119.43 REMARK 500 ALA A 469 108.01 -59.80 REMARK 500 TYR A 509 64.35 -107.47 REMARK 500 GLU A 521 -32.59 -138.92 REMARK 500 ARG A 542 -31.24 29.16 REMARK 500 ARG A 554 -95.17 8.02 REMARK 500 GLU A 557 108.77 -53.61 REMARK 500 ARG A 559 74.90 53.68 REMARK 500 PRO A 571 71.50 -62.96 REMARK 500 LEU A 572 53.32 28.98 REMARK 500 ASP A 593 -92.85 79.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 TYR A 565 -10.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 810 DISTANCE = 6.24 ANGSTROMS REMARK 525 HOH A 811 DISTANCE = 6.40 ANGSTROMS REMARK 525 HOH A 812 DISTANCE = 6.81 ANGSTROMS REMARK 525 HOH A 813 DISTANCE = 6.82 ANGSTROMS REMARK 525 HOH A 814 DISTANCE = 7.11 ANGSTROMS REMARK 525 HOH A 815 DISTANCE = 7.74 ANGSTROMS REMARK 525 HOH A 816 DISTANCE = 7.90 ANGSTROMS REMARK 525 HOH A 817 DISTANCE = 9.58 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 701 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 259 NE2 REMARK 620 2 HEM A 701 NA 88.4 REMARK 620 3 HEM A 701 NB 61.3 89.1 REMARK 620 4 HEM A 701 NC 80.9 169.3 86.9 REMARK 620 5 HEM A 701 ND 111.7 90.7 172.9 92.1 REMARK 620 6 HIS A 493 NE2 157.7 85.0 97.2 105.4 89.8 REMARK 620 N 1 2 3 4 5 DBREF 6ZMQ A 1 643 UNP Q72IU4 Q72IU4_THET2 1 643 SEQADV 6ZMQ TRP A -16 UNP Q72IU4 EXPRESSION TAG SEQADV 6ZMQ SER A -15 UNP Q72IU4 EXPRESSION TAG SEQADV 6ZMQ HIS A -14 UNP Q72IU4 EXPRESSION TAG SEQADV 6ZMQ PRO A -13 UNP Q72IU4 EXPRESSION TAG SEQADV 6ZMQ GLN A -12 UNP Q72IU4 EXPRESSION TAG SEQADV 6ZMQ PHE A -11 UNP Q72IU4 EXPRESSION TAG SEQADV 6ZMQ GLU A -10 UNP Q72IU4 EXPRESSION TAG SEQADV 6ZMQ LYS A -9 UNP Q72IU4 EXPRESSION TAG SEQADV 6ZMQ GLY A -8 UNP Q72IU4 EXPRESSION TAG SEQADV 6ZMQ ALA A -7 UNP Q72IU4 EXPRESSION TAG SEQADV 6ZMQ GLU A -6 UNP Q72IU4 EXPRESSION TAG SEQADV 6ZMQ ASN A -5 UNP Q72IU4 EXPRESSION TAG SEQADV 6ZMQ LEU A -4 UNP Q72IU4 EXPRESSION TAG SEQADV 6ZMQ TYR A -3 UNP Q72IU4 EXPRESSION TAG SEQADV 6ZMQ PHE A -2 UNP Q72IU4 EXPRESSION TAG SEQADV 6ZMQ GLN A -1 UNP Q72IU4 EXPRESSION TAG SEQADV 6ZMQ SER A 0 UNP Q72IU4 EXPRESSION TAG SEQRES 1 A 660 TRP SER HIS PRO GLN PHE GLU LYS GLY ALA GLU ASN LEU SEQRES 2 A 660 TYR PHE GLN SER MET THR PRO ALA LEU LEU GLY ASN LEU SEQRES 3 A 660 GLY VAL SER LEU ALA LEU ALA PHE SER LEU LEU GLY LEU SEQRES 4 A 660 GLY LEU ALA LEU LEU ALA TYR LEU GLN GLY ASP GLY ARG SEQRES 5 A 660 PHE LEU ARG GLY ALA ARG ALA LEU VAL PHE PRO ALA PHE SEQRES 6 A 660 LEU ALA ALA LEU ALA ALA PHE LEU ALA LEU GLU TRP ALA SEQRES 7 A 660 LEU LEU VAL HIS ASP PHE SER LEU ALA TYR VAL ALA ARG SEQRES 8 A 660 ASN HIS SER THR LYS ASP PRO LEU TRP VAL THR LEU VAL SEQRES 9 A 660 THR PRO TRP ALA ALA LEU GLU GLY SER ILE LEU LEU TRP SEQRES 10 A 660 GLY LEU LEU GLN THR LEU TYR THR LEU LEU ALA SER ARG SEQRES 11 A 660 LYS PRO LEU ASP PRO TRP ARG ALA SER LEU VAL LEU ALA SEQRES 12 A 660 VAL LEU PHE GLY ILE GLN VAL PHE PHE PHE GLY VAL MET SEQRES 13 A 660 ALA THR ILE ALA SER PRO PHE GLU THR LEU PRO ASP PRO SEQRES 14 A 660 PRO PRO ASP GLY VAL GLY PRO ASN PRO LEU LEU GLN ASN SEQRES 15 A 660 HIS TRP MET MET ALA VAL HIS PRO VAL LEU MET TYR LEU SEQRES 16 A 660 GLY PHE VAL GLY LEU SER VAL PRO TYR ALA TYR ALA VAL SEQRES 17 A 660 ALA ALA MET ALA THR ARG ARG TYR GLN THR TRP VAL GLU SEQRES 18 A 660 GLU THR ARG TRP TRP THR LEU ILE ALA TRP GLY PHE LEU SEQRES 19 A 660 THR ALA GLY LYS VAL ALA GLY MET TRP TRP SER TYR GLU SEQRES 20 A 660 VAL LEU GLY TRP GLY GLY TYR TRP ALA TRP ASP PRO VAL SEQRES 21 A 660 GLU ASN ALA SER PHE ILE PRO TRP LEU LEU ALA THR ALA SEQRES 22 A 660 PHE LEU HIS THR ALA PHE VAL GLN GLN THR ARG GLY ALA SEQRES 23 A 660 PHE LYS THR TRP ASN PHE ALA PHE VAL THR LEU ALA PHE SEQRES 24 A 660 ALA ALA THR LEU LEU GLY THR PHE LEU THR ARG SER GLY SEQRES 25 A 660 ILE ILE GLN SER VAL HIS ALA PHE ALA GLU GLY PRO VAL SEQRES 26 A 660 GLY PRO ALA PHE LEU GLY PHE PHE LEU PHE ALA THR GLY SEQRES 27 A 660 LEU GLY LEU GLY LEU LEU SER ARG VAL SER ARG GLU VAL SEQRES 28 A 660 ARG ASP ALA ALA LEU PHE HIS PRO LEU SER ARG GLU GLY SEQRES 29 A 660 ALA LEU LEU LEU GLY ALA PHE PHE PHE ALA GLY TRP ALA SEQRES 30 A 660 LEU VAL VAL VAL LEU GLY THR PHE TYR PRO LEU LEU VAL SEQRES 31 A 660 GLU ALA PHE THR GLY ALA LYS VAL SER VAL GLY ALA PRO SEQRES 32 A 660 PHE PHE ASN GLN VAL SER ALA PRO LEU GLY ALA GLY ILE SEQRES 33 A 660 LEU LEU LEU MET GLY VAL GLY PRO LEU LEU PRO TRP ARG SEQRES 34 A 660 ARG ALA ARG GLY GLU VAL LEU ARG ASN LEU LEU VAL LEU SEQRES 35 A 660 LEU LEU ALA LEU ALA LEU GLY THR LEU PHE GLY LEU LEU SEQRES 36 A 660 ARG GLY TYR THR LEU GLY ALA SER PHE ALA LEU GLY LEU SEQRES 37 A 660 PHE LEU TYR ASN ALA ALA ALA ILE TYR LEU LEU ALA ARG SEQRES 38 A 660 GLU GLY VAL LEU ALA ARG VAL ARG ALA GLY LEU SER PRO SEQRES 39 A 660 TRP GLY PHE LEU ALA ASN ARG ARG ARG VAL GLY SER LEU SEQRES 40 A 660 VAL VAL HIS PHE ALA VAL ALA LEU MET GLY LEU ALA ILE SEQRES 41 A 660 ALA PHE SER GLN THR TYR ARG LEU GLU SER GLU LYS THR SEQRES 42 A 660 LEU TYR ARG GLY GLU ALA TRP GLU VAL GLY GLY VAL ARG SEQRES 43 A 660 MET THR PHE GLN GLY VAL ARG ALA LEU ASP GLU GLY ARG SEQRES 44 A 660 ARG PHE ALA VAL GLU ALA LEU LEU LYS THR ASP ARG PHE SEQRES 45 A 660 GLY GLU VAL ARG PRO ARG LEU HIS PHE TYR PRO GLN MET SEQRES 46 A 660 ASN SER PRO LEU PRO ALA PRO LYS VAL ILE TYR THR PRO SEQRES 47 A 660 GLY ASN ASP TYR TYR PHE LEU LEU MET ASP PHE ASP ARG SEQRES 48 A 660 GLU LYS GLY GLU TRP ALA SER LEU ARG LEU ILE VAL THR SEQRES 49 A 660 PRO LEU VAL PHE TRP MET TRP VAL ALA GLY GLY LEU MET SEQRES 50 A 660 ALA LEU GLY THR LEU TYR ILE LEU TRP PRO ALA ALA ARG SEQRES 51 A 660 PRO GLU GLU ALA ARG GLY VAL SER PRO ALA HET HEM A 701 43 HET LMT A 702 35 HET LMT A 703 35 HET PTY A 704 50 HET PTY A 705 50 HET PTY A 706 50 HET PTY A 707 50 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM LMT DODECYL-BETA-D-MALTOSIDE HETNAM PTY PHOSPHATIDYLETHANOLAMINE HETSYN HEM HEME FORMUL 2 HEM C34 H32 FE N4 O4 FORMUL 3 LMT 2(C24 H46 O11) FORMUL 5 PTY 4(C40 H80 N O8 P) FORMUL 9 HOH *17(H2 O) HELIX 1 AA1 THR A 2 GLN A 31 1 30 HELIX 2 AA2 ASP A 33 ARG A 41 1 9 HELIX 3 AA3 LEU A 43 HIS A 65 1 23 HELIX 4 AA4 LEU A 69 HIS A 76 1 8 HELIX 5 AA5 PRO A 81 THR A 88 1 8 HELIX 6 AA6 PRO A 89 ALA A 91 5 3 HELIX 7 AA7 ALA A 92 ARG A 113 1 22 HELIX 8 AA8 ASP A 117 THR A 141 1 25 HELIX 9 AA9 TRP A 167 ARG A 197 1 31 HELIX 10 AB1 THR A 206 VAL A 231 1 26 HELIX 11 AB2 GLU A 244 SER A 247 5 4 HELIX 12 AB3 PHE A 248 GLY A 268 1 21 HELIX 13 AB4 PHE A 270 LEU A 291 1 22 HELIX 14 AB5 PRO A 307 ARG A 329 1 23 HELIX 15 AB6 SER A 344 PHE A 368 1 25 HELIX 16 AB7 ALA A 385 GLY A 406 1 22 HELIX 17 AB8 ASN A 421 LEU A 438 1 18 HELIX 18 AB9 THR A 442 LEU A 468 1 27 HELIX 19 AC1 GLY A 479 ALA A 482 5 4 HELIX 20 AC2 ASN A 483 TYR A 509 1 27 HELIX 21 AC3 LEU A 609 LEU A 628 1 20 SHEET 1 AA1 4 LEU A 511 LEU A 517 0 SHEET 2 AA1 4 ALA A 600 PRO A 608 -1 O LEU A 602 N LYS A 515 SHEET 3 AA1 4 TYR A 586 ASP A 591 -1 N ASP A 591 O ARG A 603 SHEET 4 AA1 4 GLY A 582 ASN A 583 -1 N ASN A 583 O TYR A 586 SHEET 1 AA2 2 GLU A 524 VAL A 525 0 SHEET 2 AA2 2 VAL A 528 ARG A 529 -1 O VAL A 528 N VAL A 525 SHEET 1 AA3 4 ALA A 537 ASP A 539 0 SHEET 2 AA3 4 PHE A 544 LEU A 549 -1 O ALA A 545 N LEU A 538 SHEET 3 AA3 4 ARG A 561 PHE A 564 -1 O PHE A 564 N VAL A 546 SHEET 4 AA3 4 LYS A 576 VAL A 577 -1 O VAL A 577 N HIS A 563 LINK NE2 HIS A 259 FE HEM A 701 1555 1555 2.28 LINK NE2 HIS A 493 FE HEM A 701 1555 1555 2.19 CRYST1 68.720 128.270 134.980 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014552 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007796 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007409 0.00000