HEADER FLUORESCENT PROTEIN 10-JUL-20 6ZQO TITLE EYFP MUTANT - F165G COMPND MOL_ID: 1; COMPND 2 MOLECULE: G PROTEIN/GFP FUSION PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RECOMBINANT VESICULAR STOMATITIS INDIANA VIRUS SOURCE 3 RVSV-G/GFP; SOURCE 4 ORGANISM_TAXID: 582817; SOURCE 5 GENE: G, GFP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ALTERNATIVE ROUTES OF POST-TRANSLATION CHEMISTRY, FLUORESCENT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR V.Z.PLETNEV,S.V.PLETNEV,N.V.PLETNEVA REVDAT 4 16-OCT-24 6ZQO 1 REMARK REVDAT 3 31-JAN-24 6ZQO 1 REMARK REVDAT 2 30-JUN-21 6ZQO 1 JRNL REVDAT 1 16-JUN-21 6ZQO 0 JRNL AUTH N.V.PLETNEVA,E.G.MAKSIMOV,E.A.PROTASOVA,A.V.MAMONTOVA, JRNL AUTH 2 T.R.SIMONYAN,R.H.ZIGANSHIN,K.A.LUKYANOV,L.MUSLINKINA, JRNL AUTH 3 S.PLETNEV,A.M.BOGDANOV,V.Z.PLETNEV JRNL TITL AMINO ACID RESIDUE AT THE 165TH POSITION TUNES EYFP JRNL TITL 2 CHROMOPHORE MATURATION. A STRUCTURE-BASED DESIGN. JRNL REF COMPUT STRUCT BIOTECHNOL J V. 19 2950 2021 JRNL REFN ESSN 2001-0370 JRNL PMID 34136094 JRNL DOI 10.1016/J.CSBJ.2021.05.017 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.8 REMARK 3 NUMBER OF REFLECTIONS : 13828 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.259 REMARK 3 R VALUE (WORKING SET) : 0.254 REMARK 3 FREE R VALUE : 0.340 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 710 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1041 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.55 REMARK 3 BIN R VALUE (WORKING SET) : 0.4470 REMARK 3 BIN FREE R VALUE SET COUNT : 50 REMARK 3 BIN FREE R VALUE : 0.3760 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1834 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 29 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 64.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.27000 REMARK 3 B22 (A**2) : 4.27000 REMARK 3 B33 (A**2) : -8.54000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.321 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.287 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.306 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.277 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.895 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1922 ; 0.006 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 1733 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2597 ; 1.542 ; 1.662 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4040 ; 1.195 ; 1.593 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 231 ; 7.857 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 99 ;34.288 ;24.141 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 326 ;18.180 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;18.061 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 236 ; 0.056 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2147 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 392 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES: REFINED INDIVIDUALLY REMARK 4 REMARK 4 6ZQO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-JUL-20. REMARK 100 THE DEPOSITION ID IS D_1292109708. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-SEP-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14573 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.7 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.4 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : 0.79400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: 1YFP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5.7 MG/ML IN 20MM TRIS 8.0 200 MM NACL REMARK 280 MIXED WITH A 1.44M (NH4)2SO4, 60MM BICINE PH 9.0 RESERVOIR REMARK 280 SOLUTION., VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 84.41900 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 28.94400 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 28.94400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 42.20950 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 28.94400 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 28.94400 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 126.62850 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 28.94400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 28.94400 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 42.20950 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 28.94400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 28.94400 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 126.62850 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 84.41900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -12 REMARK 465 ARG A -11 REMARK 465 GLY A -10 REMARK 465 SER A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 MET A 0 REMARK 465 VAL A 1 REMARK 465 ASP A 232 REMARK 465 GLU A 233 REMARK 465 LEU A 234 REMARK 465 TYR A 235 REMARK 465 LYS A 236 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 THR A 63 C PHE A 64 N 0.149 REMARK 500 LEU A 66 CA LEU A 66 C -0.255 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PHE A 64 N - CA - CB ANGL. DEV. = -13.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 73 171.60 -57.40 REMARK 500 ILE A 134 -65.03 -97.08 REMARK 500 ASN A 142 -165.73 -160.16 REMARK 500 ASP A 153 71.16 -118.81 REMARK 500 LYS A 156 20.30 -141.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 301 DBREF 6ZQO A 0 236 UNP B7UCZ6 B7UCZ6_9RHAB 512 750 SEQADV 6ZQO MET A -12 UNP B7UCZ6 INITIATING METHIONINE SEQADV 6ZQO ARG A -11 UNP B7UCZ6 EXPRESSION TAG SEQADV 6ZQO GLY A -10 UNP B7UCZ6 EXPRESSION TAG SEQADV 6ZQO SER A -9 UNP B7UCZ6 EXPRESSION TAG SEQADV 6ZQO HIS A -8 UNP B7UCZ6 EXPRESSION TAG SEQADV 6ZQO HIS A -7 UNP B7UCZ6 EXPRESSION TAG SEQADV 6ZQO HIS A -6 UNP B7UCZ6 EXPRESSION TAG SEQADV 6ZQO HIS A -5 UNP B7UCZ6 EXPRESSION TAG SEQADV 6ZQO HIS A -4 UNP B7UCZ6 EXPRESSION TAG SEQADV 6ZQO HIS A -3 UNP B7UCZ6 EXPRESSION TAG SEQADV 6ZQO GLY A -2 UNP B7UCZ6 EXPRESSION TAG SEQADV 6ZQO SER A -1 UNP B7UCZ6 EXPRESSION TAG SEQADV 6ZQO PHE A 64 UNP B7UCZ6 LEU 576 ENGINEERED MUTATION SEQADV 6ZQO CR2 A 65 UNP B7UCZ6 THR 577 CHROMOPHORE SEQADV 6ZQO CR2 A 65 UNP B7UCZ6 TYR 578 CHROMOPHORE SEQADV 6ZQO CR2 A 65 UNP B7UCZ6 GLY 579 CHROMOPHORE SEQADV 6ZQO LEU A 66 UNP B7UCZ6 VAL 580 ENGINEERED MUTATION SEQADV 6ZQO ALA A 70 UNP B7UCZ6 SER 584 ENGINEERED MUTATION SEQADV 6ZQO GLY A 163 UNP B7UCZ6 PHE 677 ENGINEERED MUTATION SEQADV 6ZQO TYR A 201 UNP B7UCZ6 THR 715 ENGINEERED MUTATION SEQRES 1 A 249 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER MET SEQRES 2 A 249 VAL SER LYS GLY GLU GLU LEU PHE THR GLY VAL VAL PRO SEQRES 3 A 249 ILE LEU VAL GLU LEU ASP GLY ASP VAL ASN GLY HIS LYS SEQRES 4 A 249 PHE SER VAL SER GLY GLU GLY GLU GLY ASP ALA THR TYR SEQRES 5 A 249 GLY LYS LEU THR LEU LYS PHE ILE CYS THR THR GLY LYS SEQRES 6 A 249 LEU PRO VAL PRO TRP PRO THR LEU VAL THR THR PHE CR2 SEQRES 7 A 249 LEU GLN CYS PHE ALA ARG TYR PRO ASP HIS MET LYS GLN SEQRES 8 A 249 HIS ASP PHE PHE LYS SER ALA MET PRO GLU GLY TYR VAL SEQRES 9 A 249 GLN GLU ARG THR ILE PHE PHE LYS ASP ASP GLY ASN TYR SEQRES 10 A 249 LYS THR ARG ALA GLU VAL LYS PHE GLU GLY ASP THR LEU SEQRES 11 A 249 VAL ASN ARG ILE GLU LEU LYS GLY ILE ASP PHE LYS GLU SEQRES 12 A 249 ASP GLY ASN ILE LEU GLY HIS LYS LEU GLU TYR ASN TYR SEQRES 13 A 249 ASN SER HIS ASN VAL TYR ILE MET ALA ASP LYS GLN LYS SEQRES 14 A 249 ASN GLY ILE LYS VAL ASN GLY LYS ILE ARG HIS ASN ILE SEQRES 15 A 249 GLU ASP GLY SER VAL GLN LEU ALA ASP HIS TYR GLN GLN SEQRES 16 A 249 ASN THR PRO ILE GLY ASP GLY PRO VAL LEU LEU PRO ASP SEQRES 17 A 249 ASN HIS TYR LEU SER TYR GLN SER ALA LEU SER LYS ASP SEQRES 18 A 249 PRO ASN GLU LYS ARG ASP HIS MET VAL LEU LEU GLU PHE SEQRES 19 A 249 VAL THR ALA ALA GLY ILE THR LEU GLY MET ASP GLU LEU SEQRES 20 A 249 TYR LYS MODRES 6ZQO CR2 A 65 THR CHROMOPHORE MODRES 6ZQO CR2 A 65 TYR CHROMOPHORE MODRES 6ZQO CR2 A 65 GLY CHROMOPHORE HET CR2 A 65 19 HET SO4 A 301 5 HETNAM CR2 {(4Z)-2-(AMINOMETHYL)-4-[(4-HYDROXYPHENYL)METHYLIDENE]- HETNAM 2 CR2 5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC ACID HETNAM SO4 SULFATE ION HETSYN CR2 CHROMOPHORE (GLY-TYR-GLY) FORMUL 1 CR2 C13 H13 N3 O4 FORMUL 2 SO4 O4 S 2- FORMUL 3 HOH *29(H2 O) HELIX 1 AA1 GLU A 5 THR A 9 5 5 HELIX 2 AA2 PRO A 56 VAL A 61 5 6 HELIX 3 AA3 LEU A 66 ALA A 70 5 5 HELIX 4 AA4 PRO A 73 HIS A 79 5 7 HELIX 5 AA5 ASP A 80 ALA A 85 1 6 HELIX 6 AA6 LYS A 154 ASN A 157 5 4 SHEET 1 AA112 VAL A 11 VAL A 22 0 SHEET 2 AA112 HIS A 25 ASP A 36 -1 O GLY A 31 N VAL A 16 SHEET 3 AA112 LYS A 41 CYS A 48 -1 O LYS A 45 N GLU A 32 SHEET 4 AA112 HIS A 215 ALA A 225 -1 O LEU A 218 N LEU A 44 SHEET 5 AA112 HIS A 197 SER A 206 -1 N SER A 200 O THR A 223 SHEET 6 AA112 HIS A 146 ASP A 153 -1 N HIS A 146 O TYR A 201 SHEET 7 AA112 GLY A 158 ASN A 168 -1 O GLY A 158 N ASP A 153 SHEET 8 AA112 VAL A 174 PRO A 185 -1 O ALA A 177 N ILE A 165 SHEET 9 AA112 TYR A 90 PHE A 98 -1 N GLU A 93 O GLN A 182 SHEET 10 AA112 ASN A 103 PHE A 112 -1 O TYR A 104 N ILE A 96 SHEET 11 AA112 LEU A 117 ILE A 126 -1 O LYS A 124 N LYS A 105 SHEET 12 AA112 VAL A 11 VAL A 22 1 N GLU A 17 O ILE A 121 LINK C BPHE A 64 N1 BCR2 A 65 1555 1555 1.33 LINK C3 BCR2 A 65 N BLEU A 66 1555 1555 1.35 CISPEP 1 MET A 86 PRO A 87 0 5.12 SITE 1 AC1 5 ARG A 71 PRO A 73 ASP A 74 LYS A 160 SITE 2 AC1 5 HOH A 422 CRYST1 57.888 57.888 168.838 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017275 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017275 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005923 0.00000 HETATM 484 N1 BCR2 A 65 -11.662 -0.433 -11.857 0.12 36.16 N HETATM 485 CA1BCR2 A 65 -10.531 -1.271 -12.290 0.12 35.23 C HETATM 486 C1 BCR2 A 65 -10.898 -1.971 -13.575 0.12 35.07 C HETATM 487 N2 BCR2 A 65 -11.503 -3.205 -13.644 0.12 36.27 N HETATM 488 N3 BCR2 A 65 -10.678 -1.447 -14.808 0.12 34.76 N HETATM 489 C2 BCR2 A 65 -11.125 -2.329 -15.675 0.12 35.62 C HETATM 490 O2 BCR2 A 65 -11.090 -2.192 -16.952 0.12 39.95 O HETATM 491 CA2BCR2 A 65 -11.665 -3.470 -14.952 0.12 37.11 C HETATM 492 CA3BCR2 A 65 -10.066 -0.179 -15.172 0.12 34.39 C HETATM 493 C3 BCR2 A 65 -9.106 -0.476 -16.289 0.12 32.82 C HETATM 494 O3 BCR2 A 65 -9.297 -0.054 -17.414 0.12 32.57 O HETATM 495 CB2BCR2 A 65 -12.282 -4.700 -15.492 0.12 36.90 C HETATM 496 CG2BCR2 A 65 -12.790 -5.790 -14.639 0.12 37.58 C HETATM 497 CD1BCR2 A 65 -12.326 -5.956 -13.342 0.12 37.88 C HETATM 498 CD2BCR2 A 65 -13.736 -6.657 -15.167 0.12 37.45 C HETATM 499 CE1BCR2 A 65 -12.822 -7.000 -12.571 0.12 37.77 C HETATM 500 CE2BCR2 A 65 -14.230 -7.697 -14.396 0.12 38.11 C HETATM 501 CZ BCR2 A 65 -13.772 -7.867 -13.099 0.12 38.17 C HETATM 502 OH BCR2 A 65 -14.261 -8.890 -12.349 0.12 40.02 O TER 1854 MET A 231 HETATM 1855 S SO4 A 301 8.228 -14.050 -13.899 1.00 90.97 S HETATM 1856 O1 SO4 A 301 7.731 -14.066 -15.243 1.00 87.91 O HETATM 1857 O2 SO4 A 301 9.212 -13.002 -13.781 1.00 91.64 O HETATM 1858 O3 SO4 A 301 7.139 -13.810 -12.980 1.00 90.98 O HETATM 1859 O4 SO4 A 301 8.826 -15.319 -13.590 1.00 82.58 O HETATM 1860 O HOH A 401 -0.789 -10.790 -7.399 1.00 57.00 O HETATM 1861 O HOH A 402 -4.501 12.074 4.844 1.00 75.48 O HETATM 1862 O HOH A 403 -13.418 -14.539 -33.532 1.00 84.94 O HETATM 1863 O HOH A 404 -0.868 -1.623 -32.584 1.00 87.09 O HETATM 1864 O HOH A 405 6.011 3.746 -26.699 1.00 68.80 O HETATM 1865 O HOH A 406 -12.735 0.796 -30.277 1.00 71.76 O HETATM 1866 O HOH A 407 -18.052 3.926 2.633 1.00 61.22 O HETATM 1867 O HOH A 408 -19.542 -5.620 0.400 1.00 41.82 O HETATM 1868 O HOH A 409 -24.577 11.805 -5.426 1.00 73.87 O HETATM 1869 O HOH A 410 -8.004 -16.984 -26.143 1.00 60.00 O HETATM 1870 O HOH A 411 -6.809 -20.192 -25.482 1.00 58.57 O HETATM 1871 O HOH A 412 -6.411 -16.983 -8.021 1.00 58.68 O HETATM 1872 O HOH A 413 -23.082 -0.741 1.984 1.00 50.55 O HETATM 1873 O HOH A 414 1.873 13.642 -18.000 1.00 79.82 O HETATM 1874 O HOH A 415 -12.387 -18.586 -10.143 1.00 64.29 O HETATM 1875 O HOH A 416 -16.781 -8.445 0.500 1.00 49.34 O HETATM 1876 O HOH A 417 -12.370 -14.751 -30.834 1.00 76.25 O HETATM 1877 O HOH A 418 -19.594 -5.227 -8.383 1.00 49.53 O HETATM 1878 O HOH A 419 -22.260 6.394 0.196 1.00 75.81 O HETATM 1879 O HOH A 420 -18.188 -2.614 6.744 1.00 63.36 O HETATM 1880 O HOH A 421 -19.885 -0.569 2.290 1.00 58.37 O HETATM 1881 O HOH A 422 5.976 -16.421 -12.777 1.00 78.58 O HETATM 1882 O HOH A 423 -19.067 16.984 -2.716 1.00 75.48 O HETATM 1883 O HOH A 424 -14.528 -11.463 -5.158 1.00 59.36 O HETATM 1884 O HOH A 425 -36.546 -3.497 -1.697 1.00 70.07 O HETATM 1885 O HOH A 426 -34.807 2.290 -12.300 1.00 74.62 O HETATM 1886 O HOH A 427 -17.259 7.230 -21.489 1.00 71.55 O HETATM 1887 O HOH A 428 -19.918 2.070 0.933 1.00 51.94 O HETATM 1888 O HOH A 429 -13.679 -15.313 -8.791 1.00 59.59 O CONECT 467 484 CONECT 484 467 485 CONECT 485 484 486 CONECT 486 485 487 488 CONECT 487 486 491 CONECT 488 486 489 492 CONECT 489 488 490 491 CONECT 490 489 CONECT 491 487 489 495 CONECT 492 488 493 CONECT 493 492 494 504 CONECT 494 493 CONECT 495 491 496 CONECT 496 495 497 498 CONECT 497 496 499 CONECT 498 496 500 CONECT 499 497 501 CONECT 500 498 501 CONECT 501 499 500 502 CONECT 502 501 CONECT 504 493 CONECT 1855 1856 1857 1858 1859 CONECT 1856 1855 CONECT 1857 1855 CONECT 1858 1855 CONECT 1859 1855 MASTER 348 0 2 6 12 0 2 6 1868 1 26 20 END