HEADER OXIDOREDUCTASE 13-AUG-20 7A1O TITLE FACTOR INHIBITING HIF-1 ALPHA IN COMPLEX WITH ZN(II), 4-ETHYL-2- TITLE 2 OXOGLUTARATE, AND CONSENSUS ANKYRIN REPEAT DOMAIN (20-MER) COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: FACTOR INHIBITING HIF-1,FIH-1,HYPOXIA-INDUCIBLE FACTOR COMPND 5 ASPARAGINE HYDROXYLASE; COMPND 6 EC: 1.14.11.30,1.14.11.-; COMPND 7 ENGINEERED: YES; COMPND 8 OTHER_DETAILS: COMPND 9 MAATAAEAVASGSGEPREEAGALGPAWDESQLRSYSFPTRPIPRLSQSDPRAEELIENEEPVVLTDTNL COMPND 10 VYPALKWDLEY LQENIGNGDFSVYSASTHKFLYYDEKKMANFQNFKPRSNREEMKFHEFVEKLQDIQQ COMPND 11 RGGEERLYLQQTLNDTVGRKIVM COMPND 12 DFLGFNWNWINKQQGKRGWGQLTSNLLLIGMEGNVTPAHYDEQQNFFAQIKGYKRCILFPPDQFECLYP COMPND 13 YPVHHPCDRQS QVDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFWY COMPND 14 KGAPTPKRIEYPLKAHQKVAIMR NIEKMLGEALGNPQEVGPLLNTMIKGRYN (ZN)(SO4)(SO4) COMPND 15 (SO4); COMPND 16 MOL_ID: 2; COMPND 17 MOLECULE: CONSENSUS ANKYRIN REPEAT DOMAIN; COMPND 18 CHAIN: B; COMPND 19 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HIF1AN, FIH1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 11 ORGANISM_TAXID: 32630 KEYWDS HYPOXIA-INDUCIBLE FACTOR ASPARAGINE HYDROXYLASE, DIOXYGENASE, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.NAKASHIMA,L.BREWITZ,C.J.SCHOFIELD REVDAT 3 31-JAN-24 7A1O 1 REMARK REVDAT 2 22-DEC-21 7A1O 1 JRNL REVDAT 1 25-AUG-21 7A1O 0 JRNL AUTH Y.NAKASHIMA,L.BREWITZ,A.TUMBER,E.SALAH,C.J.SCHOFIELD JRNL TITL 2-OXOGLUTARATE DERIVATIVES CAN SELECTIVELY ENHANCE OR JRNL TITL 2 INHIBIT THE ACTIVITY OF HUMAN OXYGENASES. JRNL REF NAT COMMUN V. 12 6478 2021 JRNL REFN ESSN 2041-1723 JRNL PMID 34759269 JRNL DOI 10.1038/S41467-021-26673-2 REMARK 2 REMARK 2 RESOLUTION. 2.21 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.21 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 74.41 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.6 REMARK 3 NUMBER OF REFLECTIONS : 47454 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.720 REMARK 3 FREE R VALUE TEST SET COUNT : 2238 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 74.4100 - 5.5700 1.00 3141 173 0.2058 0.2425 REMARK 3 2 5.5700 - 4.4200 1.00 3145 173 0.1601 0.1752 REMARK 3 3 4.4200 - 3.9200 1.00 2741 155 0.1518 0.1849 REMARK 3 4 3.8600 - 3.5100 0.88 2747 138 0.1905 0.2540 REMARK 3 5 3.5100 - 3.2600 1.00 3148 167 0.2136 0.2539 REMARK 3 6 3.2600 - 3.0700 1.00 3155 133 0.2313 0.3185 REMARK 3 7 3.0700 - 2.9100 1.00 3175 160 0.2580 0.3217 REMARK 3 8 2.9100 - 2.7900 1.00 3148 137 0.2670 0.2820 REMARK 3 9 2.7900 - 2.7000 1.00 2557 116 0.2827 0.3493 REMARK 3 10 2.6400 - 2.5900 0.99 1887 72 0.2966 0.2079 REMARK 3 11 2.5900 - 2.5100 1.00 3166 143 0.2817 0.3218 REMARK 3 12 2.5100 - 2.4300 1.00 3162 156 0.2882 0.2984 REMARK 3 13 2.4300 - 2.3700 1.00 3193 133 0.3067 0.3622 REMARK 3 14 2.3700 - 2.3100 1.00 3130 160 0.3339 0.3438 REMARK 3 15 2.3100 - 2.2700 0.98 2606 160 0.3501 0.3609 REMARK 3 16 2.2300 - 2.2100 0.77 1115 62 0.3425 0.4128 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.361 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.367 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 56.97 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 75.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 3049 REMARK 3 ANGLE : 0.518 4148 REMARK 3 CHIRALITY : 0.042 425 REMARK 3 PLANARITY : 0.004 551 REMARK 3 DIHEDRAL : 15.952 1113 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.8497 -31.1107 24.7263 REMARK 3 T TENSOR REMARK 3 T11: 1.0803 T22: 0.7489 REMARK 3 T33: 1.0067 T12: -0.0134 REMARK 3 T13: 0.3190 T23: -0.0626 REMARK 3 L TENSOR REMARK 3 L11: 0.9922 L22: 2.3346 REMARK 3 L33: 0.6970 L12: -0.8422 REMARK 3 L13: -0.5756 L23: 1.0720 REMARK 3 S TENSOR REMARK 3 S11: -0.4554 S12: -0.0699 S13: -0.4409 REMARK 3 S21: 1.0373 S22: 0.0184 S23: 1.0172 REMARK 3 S31: 0.4624 S32: 0.1333 S33: 0.4212 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 32 THROUGH 49 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.2522 -32.6471 21.4790 REMARK 3 T TENSOR REMARK 3 T11: 0.7474 T22: 0.5179 REMARK 3 T33: 0.5293 T12: 0.0231 REMARK 3 T13: 0.1769 T23: 0.0205 REMARK 3 L TENSOR REMARK 3 L11: 0.7555 L22: 0.5575 REMARK 3 L33: 0.7324 L12: -0.1396 REMARK 3 L13: -0.1469 L23: -0.0347 REMARK 3 S TENSOR REMARK 3 S11: -0.1698 S12: 0.2083 S13: 0.3041 REMARK 3 S21: 0.5367 S22: -0.0755 S23: 0.6325 REMARK 3 S31: 0.1388 S32: -0.0073 S33: 0.3266 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 50 THROUGH 124 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.0119 -21.4730 5.4570 REMARK 3 T TENSOR REMARK 3 T11: 0.7145 T22: 0.5215 REMARK 3 T33: 0.5823 T12: 0.0837 REMARK 3 T13: 0.1100 T23: 0.0985 REMARK 3 L TENSOR REMARK 3 L11: 2.1953 L22: 2.0872 REMARK 3 L33: 1.5437 L12: -0.8995 REMARK 3 L13: -0.4178 L23: 1.2269 REMARK 3 S TENSOR REMARK 3 S11: 0.3308 S12: 0.4090 S13: 0.2342 REMARK 3 S21: -0.3464 S22: -0.1789 S23: -0.0338 REMARK 3 S31: -0.2481 S32: -0.2812 S33: -0.1104 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 125 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.6193 -18.0240 -1.5885 REMARK 3 T TENSOR REMARK 3 T11: 0.9467 T22: 0.9144 REMARK 3 T33: 0.7269 T12: 0.2812 REMARK 3 T13: 0.0451 T23: 0.0920 REMARK 3 L TENSOR REMARK 3 L11: 2.5253 L22: 3.8739 REMARK 3 L33: 2.9410 L12: 0.2967 REMARK 3 L13: 1.0918 L23: -0.4080 REMARK 3 S TENSOR REMARK 3 S11: 0.1941 S12: 0.4152 S13: 0.2229 REMARK 3 S21: -0.6222 S22: -0.0822 S23: 0.4352 REMARK 3 S31: -0.2109 S32: -0.7608 S33: 0.1008 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 150 THROUGH 297 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.8236 -27.4019 10.7682 REMARK 3 T TENSOR REMARK 3 T11: 0.5800 T22: 0.4731 REMARK 3 T33: 0.5084 T12: 0.0263 REMARK 3 T13: 0.0708 T23: 0.0366 REMARK 3 L TENSOR REMARK 3 L11: 1.4402 L22: 3.0435 REMARK 3 L33: 1.6915 L12: -0.7555 REMARK 3 L13: -0.7367 L23: 1.3770 REMARK 3 S TENSOR REMARK 3 S11: 0.0958 S12: 0.1339 S13: 0.1327 REMARK 3 S21: -0.0847 S22: 0.0462 S23: 0.1071 REMARK 3 S31: -0.1221 S32: -0.1448 S33: -0.1397 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 298 THROUGH 330 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.8614 -36.5078 7.5560 REMARK 3 T TENSOR REMARK 3 T11: 0.5844 T22: 0.5423 REMARK 3 T33: 0.6004 T12: -0.0251 REMARK 3 T13: 0.0816 T23: -0.0842 REMARK 3 L TENSOR REMARK 3 L11: 1.9660 L22: 2.4714 REMARK 3 L33: 1.6076 L12: -0.1978 REMARK 3 L13: -0.6210 L23: 0.2788 REMARK 3 S TENSOR REMARK 3 S11: 0.1504 S12: -0.2872 S13: 0.3098 REMARK 3 S21: 0.0531 S22: 0.1877 S23: -0.3855 REMARK 3 S31: -0.2749 S32: 0.1360 S33: -0.3817 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 331 THROUGH 349 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.3870 -49.8297 -5.2471 REMARK 3 T TENSOR REMARK 3 T11: 0.5492 T22: 0.6381 REMARK 3 T33: 0.4571 T12: 0.0164 REMARK 3 T13: 0.0367 T23: -0.0494 REMARK 3 L TENSOR REMARK 3 L11: 1.8483 L22: 5.9992 REMARK 3 L33: 3.4971 L12: -0.9420 REMARK 3 L13: 0.6732 L23: -2.7714 REMARK 3 S TENSOR REMARK 3 S11: 0.1297 S12: 0.1977 S13: 0.0553 REMARK 3 S21: -0.4386 S22: -0.1204 S23: 0.0087 REMARK 3 S31: 0.1595 S32: -0.0672 S33: -0.2103 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 9 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.5127 -35.5506 6.8342 REMARK 3 T TENSOR REMARK 3 T11: 0.6234 T22: 0.7143 REMARK 3 T33: 0.7756 T12: -0.1303 REMARK 3 T13: 0.0457 T23: -0.1394 REMARK 3 L TENSOR REMARK 3 L11: 9.5005 L22: 0.5974 REMARK 3 L33: 5.4248 L12: 1.5333 REMARK 3 L13: 7.1754 L23: 1.1194 REMARK 3 S TENSOR REMARK 3 S11: 0.0613 S12: 0.4249 S13: 0.3292 REMARK 3 S21: 0.0098 S22: -0.0085 S23: -0.5641 REMARK 3 S31: -0.0524 S32: 0.9374 S33: -0.0089 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 10 THROUGH 20 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.3096 -25.5314 1.4097 REMARK 3 T TENSOR REMARK 3 T11: 0.8861 T22: 0.6610 REMARK 3 T33: 0.7205 T12: -0.0528 REMARK 3 T13: 0.1043 T23: 0.0755 REMARK 3 L TENSOR REMARK 3 L11: 4.4110 L22: 3.7810 REMARK 3 L33: 3.9889 L12: -1.6921 REMARK 3 L13: 2.1457 L23: -0.9381 REMARK 3 S TENSOR REMARK 3 S11: -0.2676 S12: 1.2121 S13: 0.6401 REMARK 3 S21: -0.6193 S22: -0.0784 S23: -0.5203 REMARK 3 S31: -0.7089 S32: 0.7893 S33: 0.2681 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7A1O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-AUG-20. REMARK 100 THE DEPOSITION ID IS D_1292110546. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-NOV-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97950 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : AUTOPROC REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47454 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.210 REMARK 200 RESOLUTION RANGE LOW (A) : 74.410 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.5 REMARK 200 DATA REDUNDANCY : 26.10 REMARK 200 R MERGE (I) : 0.15500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.21 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.25 REMARK 200 COMPLETENESS FOR SHELL (%) : 56.8 REMARK 200 DATA REDUNDANCY IN SHELL : 16.80 REMARK 200 R MERGE FOR SHELL (I) : 6.55600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1H2K REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6M AMMONIUM SULPHATE, 6% PEG 400, REMARK 280 0.1M HEPES PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 73.46700 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 43.14400 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 43.14400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 36.73350 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 43.14400 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 43.14400 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 110.20050 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 43.14400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.14400 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 36.73350 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 43.14400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.14400 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 110.20050 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 73.46700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -217.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 86.28800 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 -86.28800 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 HIS B 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 7 CG CD OE1 OE2 REMARK 470 VAL A 9 CG1 CG2 REMARK 470 GLU A 15 CG CD OE1 OE2 REMARK 470 GLU A 29 CD OE1 OE2 REMARK 470 LYS A 115 CE NZ REMARK 470 ARG A 156 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 157 CE NZ REMARK 470 LYS A 304 CG CD CE NZ REMARK 470 ARG A 305 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 311 CE NZ REMARK 470 LEU B 2 CG CD1 CD2 REMARK 470 LYS B 20 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 28 HG SER A 30 1.58 REMARK 500 O HOH A 686 O HOH A 687 1.96 REMARK 500 O HOH A 634 O HOH B 103 2.00 REMARK 500 O HOH A 641 O HOH A 681 2.02 REMARK 500 O HOH A 668 O HOH A 669 2.04 REMARK 500 O HOH A 615 O HOH A 684 2.06 REMARK 500 O HOH A 656 O HOH A 682 2.07 REMARK 500 O HOH A 643 O HOH A 672 2.14 REMARK 500 OD1 ASP A 28 OG SER A 30 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 323 HH22 ARG A 347 7645 1.56 REMARK 500 OH TYR A 71 OE1 GLU A 225 5555 2.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 66 47.68 -141.48 REMARK 500 PHE A 100 74.52 -107.22 REMARK 500 ASN A 151 -156.31 -129.59 REMARK 500 GLU A 202 35.35 -83.75 REMARK 500 ILE A 210 -55.82 -120.32 REMARK 500 CYS A 236 32.54 -92.50 REMARK 500 ARG A 238 -5.32 79.81 REMARK 500 TYR A 276 -13.70 77.65 REMARK 500 ALA B 13 29.94 -144.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 199 NE2 REMARK 620 2 ASP A 201 OD2 119.7 REMARK 620 3 HIS A 279 NE2 91.1 88.5 REMARK 620 4 QVT A 505 O05 85.2 155.1 92.6 REMARK 620 5 QVT A 505 O04 152.0 82.2 107.8 73.7 REMARK 620 N 1 2 3 4 DBREF 7A1O A 1 349 UNP Q9NWT6 HIF1N_HUMAN 1 349 DBREF 7A1O B 1 20 PDB 7A1O 7A1O 1 20 SEQRES 1 A 349 MET ALA ALA THR ALA ALA GLU ALA VAL ALA SER GLY SER SEQRES 2 A 349 GLY GLU PRO ARG GLU GLU ALA GLY ALA LEU GLY PRO ALA SEQRES 3 A 349 TRP ASP GLU SER GLN LEU ARG SER TYR SER PHE PRO THR SEQRES 4 A 349 ARG PRO ILE PRO ARG LEU SER GLN SER ASP PRO ARG ALA SEQRES 5 A 349 GLU GLU LEU ILE GLU ASN GLU GLU PRO VAL VAL LEU THR SEQRES 6 A 349 ASP THR ASN LEU VAL TYR PRO ALA LEU LYS TRP ASP LEU SEQRES 7 A 349 GLU TYR LEU GLN GLU ASN ILE GLY ASN GLY ASP PHE SER SEQRES 8 A 349 VAL TYR SER ALA SER THR HIS LYS PHE LEU TYR TYR ASP SEQRES 9 A 349 GLU LYS LYS MET ALA ASN PHE GLN ASN PHE LYS PRO ARG SEQRES 10 A 349 SER ASN ARG GLU GLU MET LYS PHE HIS GLU PHE VAL GLU SEQRES 11 A 349 LYS LEU GLN ASP ILE GLN GLN ARG GLY GLY GLU GLU ARG SEQRES 12 A 349 LEU TYR LEU GLN GLN THR LEU ASN ASP THR VAL GLY ARG SEQRES 13 A 349 LYS ILE VAL MET ASP PHE LEU GLY PHE ASN TRP ASN TRP SEQRES 14 A 349 ILE ASN LYS GLN GLN GLY LYS ARG GLY TRP GLY GLN LEU SEQRES 15 A 349 THR SER ASN LEU LEU LEU ILE GLY MET GLU GLY ASN VAL SEQRES 16 A 349 THR PRO ALA HIS TYR ASP GLU GLN GLN ASN PHE PHE ALA SEQRES 17 A 349 GLN ILE LYS GLY TYR LYS ARG CYS ILE LEU PHE PRO PRO SEQRES 18 A 349 ASP GLN PHE GLU CYS LEU TYR PRO TYR PRO VAL HIS HIS SEQRES 19 A 349 PRO CYS ASP ARG GLN SER GLN VAL ASP PHE ASP ASN PRO SEQRES 20 A 349 ASP TYR GLU ARG PHE PRO ASN PHE GLN ASN VAL VAL GLY SEQRES 21 A 349 TYR GLU THR VAL VAL GLY PRO GLY ASP VAL LEU TYR ILE SEQRES 22 A 349 PRO MET TYR TRP TRP HIS HIS ILE GLU SER LEU LEU ASN SEQRES 23 A 349 GLY GLY ILE THR ILE THR VAL ASN PHE TRP TYR LYS GLY SEQRES 24 A 349 ALA PRO THR PRO LYS ARG ILE GLU TYR PRO LEU LYS ALA SEQRES 25 A 349 HIS GLN LYS VAL ALA ILE MET ARG ASN ILE GLU LYS MET SEQRES 26 A 349 LEU GLY GLU ALA LEU GLY ASN PRO GLN GLU VAL GLY PRO SEQRES 27 A 349 LEU LEU ASN THR MET ILE LYS GLY ARG TYR ASN SEQRES 1 B 20 HIS LEU GLU VAL VAL LYS LEU LEU LEU GLU ALA GLY ALA SEQRES 2 B 20 ASP VAL ASN ALA GLN ASP LYS HET ZN A 501 1 HET SO4 A 502 5 HET SO4 A 503 5 HET SO4 A 504 5 HET QVT A 505 20 HET SO4 A 506 5 HETNAM ZN ZINC ION HETNAM SO4 SULFATE ION HETNAM QVT 4-ETHYL-2-OXOGLUTARATE HETSYN QVT (2~{S})-2-ETHYL-4-OXIDANYLIDENE-PENTANEDIOIC ACID FORMUL 3 ZN ZN 2+ FORMUL 4 SO4 4(O4 S 2-) FORMUL 7 QVT C7 H10 O5 FORMUL 9 HOH *90(H2 O) HELIX 1 AA1 ALA A 3 ALA A 10 1 8 HELIX 2 AA2 ASP A 28 LEU A 32 5 5 HELIX 3 AA3 ASP A 49 ASN A 58 1 10 HELIX 4 AA4 VAL A 70 TRP A 76 5 7 HELIX 5 AA5 ASP A 77 ILE A 85 1 9 HELIX 6 AA6 ASP A 104 MET A 108 5 5 HELIX 7 AA7 PHE A 125 ARG A 138 1 14 HELIX 8 AA8 GLY A 155 GLY A 164 1 10 HELIX 9 AA9 ASN A 166 ARG A 177 1 12 HELIX 10 AB1 PRO A 220 ASP A 222 5 3 HELIX 11 AB2 GLN A 223 TYR A 228 1 6 HELIX 12 AB3 PHE A 252 VAL A 258 5 7 HELIX 13 AB4 LYS A 311 GLY A 331 1 21 HELIX 14 AB5 ASN A 332 GLN A 334 5 3 HELIX 15 AB6 GLU A 335 LYS A 345 1 11 HELIX 16 AB7 GLU B 3 GLU B 10 1 8 SHEET 1 AA1 5 THR A 39 PRO A 41 0 SHEET 2 AA1 5 GLY A 260 VAL A 265 1 O GLU A 262 N ARG A 40 SHEET 3 AA1 5 LYS A 214 PHE A 219 -1 N LEU A 218 O TYR A 261 SHEET 4 AA1 5 TRP A 278 SER A 283 -1 O HIS A 280 N ILE A 217 SHEET 5 AA1 5 VAL A 195 HIS A 199 -1 N THR A 196 O ILE A 281 SHEET 1 AA2 9 ARG A 44 LEU A 45 0 SHEET 2 AA2 9 VAL A 62 LEU A 64 1 O VAL A 63 N LEU A 45 SHEET 3 AA2 9 VAL A 270 ILE A 273 -1 O VAL A 270 N LEU A 64 SHEET 4 AA2 9 GLN A 204 LYS A 211 -1 N PHE A 207 O LEU A 271 SHEET 5 AA2 9 THR A 290 TYR A 297 -1 O ILE A 291 N ILE A 210 SHEET 6 AA2 9 LEU A 186 GLY A 190 -1 N LEU A 188 O THR A 292 SHEET 7 AA2 9 ARG A 143 THR A 149 -1 N LEU A 146 O ILE A 189 SHEET 8 AA2 9 ASP A 89 ALA A 95 -1 N TYR A 93 O TYR A 145 SHEET 9 AA2 9 SER A 118 LYS A 124 -1 O MET A 123 N PHE A 90 SHEET 1 AA3 6 ARG A 44 LEU A 45 0 SHEET 2 AA3 6 VAL A 62 LEU A 64 1 O VAL A 63 N LEU A 45 SHEET 3 AA3 6 VAL A 270 ILE A 273 -1 O VAL A 270 N LEU A 64 SHEET 4 AA3 6 GLN A 204 LYS A 211 -1 N PHE A 207 O LEU A 271 SHEET 5 AA3 6 THR A 290 TYR A 297 -1 O ILE A 291 N ILE A 210 SHEET 6 AA3 6 LEU A 182 SER A 184 -1 N THR A 183 O TRP A 296 LINK NE2 HIS A 199 ZN ZN A 501 1555 1555 2.13 LINK OD2 ASP A 201 ZN ZN A 501 1555 1555 2.11 LINK NE2 HIS A 279 ZN ZN A 501 1555 1555 2.14 LINK ZN ZN A 501 O05 QVT A 505 1555 1555 2.27 LINK ZN ZN A 501 O04 QVT A 505 1555 1555 2.15 CISPEP 1 TYR A 308 PRO A 309 0 3.30 CRYST1 86.288 86.288 146.934 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011589 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011589 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006806 0.00000