HEADER OXIDOREDUCTASE 13-AUG-20 7A1P
TITLE FACTOR INHIBITING HIF-1 ALPHA IN COMPLEX WITH ZN(II), 4-PROPYL-2-
TITLE 2 OXOGLUTARATE, AND CONSENSUS ANKYRIN REPEAT DOMAIN (20-MER)
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR;
COMPND 3 CHAIN: A;
COMPND 4 SYNONYM: FACTOR INHIBITING HIF-1,FIH-1,HYPOXIA-INDUCIBLE FACTOR
COMPND 5 ASPARAGINE HYDROXYLASE;
COMPND 6 EC: 1.14.11.30,1.14.11.-;
COMPND 7 ENGINEERED: YES;
COMPND 8 MOL_ID: 2;
COMPND 9 MOLECULE: CONSENSUS ANKYRIN REPEAT DOMAIN;
COMPND 10 CHAIN: B;
COMPND 11 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: HIF1AN, FIH1;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008;
SOURCE 8 MOL_ID: 2;
SOURCE 9 SYNTHETIC: YES;
SOURCE 10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT;
SOURCE 11 ORGANISM_TAXID: 32630
KEYWDS HYPOXIA-INDUCIBLE FACTOR ASPARAGINE HYDROXYLASE, DIOXYGENASE,
KEYWDS 2 OXIDOREDUCTASE
EXPDTA X-RAY DIFFRACTION
AUTHOR Y.NAKASHIMA,L.BREWITZ,C.J.SCHOFIELD
REVDAT 3 31-JAN-24 7A1P 1 REMARK
REVDAT 2 22-DEC-21 7A1P 1 JRNL
REVDAT 1 25-AUG-21 7A1P 0
JRNL AUTH Y.NAKASHIMA,L.BREWITZ,A.TUMBER,E.SALAH,C.J.SCHOFIELD
JRNL TITL 2-OXOGLUTARATE DERIVATIVES CAN SELECTIVELY ENHANCE OR
JRNL TITL 2 INHIBIT THE ACTIVITY OF HUMAN OXYGENASES.
JRNL REF NAT COMMUN V. 12 6478 2021
JRNL REFN ESSN 2041-1723
JRNL PMID 34759269
JRNL DOI 10.1038/S41467-021-26673-2
REMARK 2
REMARK 2 RESOLUTION. 1.76 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : PHENIX 1.17.1_3660
REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN
REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,
REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,
REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,
REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON,
REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,
REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT
REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART
REMARK 3
REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.76
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 56.20
REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330
REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8
REMARK 3 NUMBER OF REFLECTIONS : 104634
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 R VALUE (WORKING + TEST SET) : 0.162
REMARK 3 R VALUE (WORKING SET) : 0.161
REMARK 3 FREE R VALUE : 0.191
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900
REMARK 3 FREE R VALUE TEST SET COUNT : 5131
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS).
REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE
REMARK 3 1 56.2000 - 5.4700 1.00 3321 185 0.2064 0.2370
REMARK 3 2 5.4600 - 4.3400 1.00 3338 154 0.1361 0.1668
REMARK 3 3 4.3400 - 3.7900 1.00 3338 148 0.1253 0.1775
REMARK 3 4 3.7900 - 3.4400 1.00 3312 193 0.1456 0.1666
REMARK 3 5 3.4400 - 3.2000 1.00 3317 155 0.1498 0.1754
REMARK 3 6 3.2000 - 3.0100 1.00 3388 140 0.1546 0.1855
REMARK 3 7 3.0100 - 2.8600 1.00 3322 155 0.1510 0.1609
REMARK 3 8 2.8600 - 2.7300 1.00 3335 182 0.1432 0.1849
REMARK 3 9 2.7300 - 2.6300 1.00 3291 193 0.1400 0.1649
REMARK 3 10 2.6300 - 2.5400 1.00 3363 138 0.1348 0.1824
REMARK 3 11 2.5400 - 2.4600 1.00 3268 216 0.1318 0.1518
REMARK 3 12 2.4600 - 2.3900 1.00 3291 195 0.1351 0.1607
REMARK 3 13 2.3900 - 2.3200 1.00 3342 171 0.1517 0.1850
REMARK 3 14 2.3200 - 2.2700 1.00 3304 184 0.1412 0.1601
REMARK 3 15 2.2700 - 2.2200 1.00 3329 154 0.1438 0.1721
REMARK 3 16 2.2200 - 2.1700 1.00 3364 152 0.1606 0.2065
REMARK 3 17 2.1700 - 2.1300 1.00 3319 181 0.1729 0.2114
REMARK 3 18 2.1300 - 2.0900 1.00 3295 181 0.1707 0.1934
REMARK 3 19 2.0900 - 2.0500 1.00 3282 179 0.1830 0.1961
REMARK 3 20 2.0500 - 2.0100 1.00 3369 171 0.2011 0.2268
REMARK 3 21 2.0100 - 1.9800 1.00 3299 193 0.2118 0.2344
REMARK 3 22 1.9800 - 1.9500 1.00 3289 185 0.2237 0.2155
REMARK 3 23 1.9500 - 1.9200 1.00 3277 212 0.2424 0.2556
REMARK 3 24 1.9200 - 1.9000 1.00 3337 161 0.2762 0.2955
REMARK 3 25 1.9000 - 1.8700 1.00 3368 127 0.2849 0.3475
REMARK 3 26 1.8700 - 1.8500 1.00 3357 158 0.3203 0.2951
REMARK 3 27 1.8500 - 1.8200 1.00 3306 141 0.3606 0.3789
REMARK 3 28 1.8200 - 1.8000 0.99 3358 164 0.3706 0.3861
REMARK 3 29 1.8000 - 1.7800 0.98 3208 172 0.3962 0.4266
REMARK 3 30 1.7800 - 1.7600 0.97 3216 191 0.4077 0.4072
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL
REMARK 3 SOLVENT RADIUS : 1.11
REMARK 3 SHRINKAGE RADIUS : 0.90
REMARK 3 K_SOL : NULL
REMARK 3 B_SOL : NULL
REMARK 3
REMARK 3 ERROR ESTIMATES.
REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.274
REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.315
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 40.79
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.77
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 TWINNING INFORMATION.
REMARK 3 FRACTION: NULL
REMARK 3 OPERATOR: NULL
REMARK 3
REMARK 3 DEVIATIONS FROM IDEAL VALUES.
REMARK 3 RMSD COUNT
REMARK 3 BOND : 0.010 3024
REMARK 3 ANGLE : 1.017 4114
REMARK 3 CHIRALITY : 0.059 417
REMARK 3 PLANARITY : 0.007 549
REMARK 3 DIHEDRAL : 22.132 1119
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 1
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: ALL
REMARK 3 ORIGIN FOR THE GROUP (A): 22.1749 -27.5130 8.5702
REMARK 3 T TENSOR
REMARK 3 T11: 0.4397 T22: 0.3409
REMARK 3 T33: 0.3692 T12: 0.0121
REMARK 3 T13: 0.0376 T23: 0.0288
REMARK 3 L TENSOR
REMARK 3 L11: 0.8363 L22: 2.0047
REMARK 3 L33: 0.9558 L12: -0.6707
REMARK 3 L13: -0.2587 L23: 0.8221
REMARK 3 S TENSOR
REMARK 3 S11: 0.0355 S12: 0.1130 S13: 0.0559
REMARK 3 S21: -0.0672 S22: -0.0343 S23: 0.1351
REMARK 3 S31: -0.1432 S32: -0.0840 S33: -0.0044
REMARK 3
REMARK 3 NCS DETAILS
REMARK 3 NUMBER OF NCS GROUPS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 7A1P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-AUG-20.
REMARK 100 THE DEPOSITION ID IS D_1292110547.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 30-NOV-19
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 7.5
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : DIAMOND
REMARK 200 BEAMLINE : I04
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.97950
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : PIXEL
REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : AUTOPROC
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 104634
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.759
REMARK 200 RESOLUTION RANGE LOW (A) : 74.275
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0
REMARK 200 DATA REDUNDANCY : 26.60
REMARK 200 R MERGE (I) : 0.07600
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 22.5000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.76
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79
REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0
REMARK 200 DATA REDUNDANCY IN SHELL : 28.00
REMARK 200 R MERGE FOR SHELL (I) : 6.50400
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 0.600
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: 1H2K
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 62.51
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.28
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6M AMMONIUM SULPHATE, 6% PEG 400,
REMARK 280 0.1M HEPES PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE
REMARK 280 277K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,-Y,Z+1/2
REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4
REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4
REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4
REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4
REMARK 290 7555 Y,X,-Z
REMARK 290 8555 -Y,-X,-Z+1/2
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 73.81400
REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 42.97250
REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 42.97250
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 36.90700
REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 42.97250
REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 42.97250
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 110.72100
REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 42.97250
REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 42.97250
REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 36.90700
REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 42.97250
REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 42.97250
REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 110.72100
REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 73.81400
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 8950 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 30190 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -201.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 85.94500
REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 -85.94500
REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET A 1
REMARK 465 ALA A 2
REMARK 465 ALA A 3
REMARK 465 THR A 4
REMARK 465 ALA A 5
REMARK 465 ALA A 6
REMARK 465 GLU A 7
REMARK 465 ALA A 8
REMARK 465 VAL A 9
REMARK 465 ALA A 10
REMARK 465 SER A 11
REMARK 465 HIS B 1
REMARK 465 LEU B 2
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 GLU A 15 CG CD OE1 OE2
REMARK 470 GLU A 29 CD OE1 OE2
REMARK 470 LYS A 115 CG CD CE NZ
REMARK 470 GLN A 137 OE1 NE2
REMARK 470 LYS A 304 CG CD CE NZ
REMARK 470 ARG A 305 CG CD NE CZ NH1 NH2
REMARK 470 GLU A 307 CG CD OE1 OE2
REMARK 470 LYS B 20 CG CD CE NZ
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 O HOH A 755 O HOH A 793 1.83
REMARK 500 O HOH A 769 O HOH A 775 1.83
REMARK 500 O HOH B 107 O HOH B 117 1.84
REMARK 500 O HOH A 743 O HOH A 762 1.89
REMARK 500 O HOH A 606 O HOH B 117 1.90
REMARK 500 O HOH A 683 O HOH A 781 1.91
REMARK 500 O HOH A 798 O HOH A 807 1.94
REMARK 500 O HOH A 686 O HOH B 118 1.95
REMARK 500 O HOH A 751 O HOH A 800 1.95
REMARK 500 O HOH A 793 O HOH B 110 1.98
REMARK 500 O HOH A 684 O HOH A 763 2.00
REMARK 500 O HOH A 716 O HOH A 810 2.04
REMARK 500 O HOH A 733 O HOH A 802 2.05
REMARK 500 O HOH A 798 O HOH A 813 2.05
REMARK 500 O HOH A 706 O HOH A 722 2.05
REMARK 500 O HOH A 748 O HOH A 786 2.06
REMARK 500 O HOH A 760 O HOH A 768 2.08
REMARK 500 O HOH A 807 O HOH A 811 2.09
REMARK 500 O HOH A 729 O HOH A 757 2.09
REMARK 500 O HOH A 719 O HOH A 757 2.12
REMARK 500 O HOH A 702 O HOH A 742 2.13
REMARK 500 O HOH A 806 O HOH A 817 2.13
REMARK 500 O HOH A 803 O HOH A 806 2.13
REMARK 500 O HOH A 759 O HOH A 774 2.16
REMARK 500 O HOH A 759 O HOH A 792 2.17
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 ASP A 66 35.60 -140.73
REMARK 500 PHE A 100 73.66 -107.82
REMARK 500 GLU A 202 34.76 -92.99
REMARK 500 ARG A 238 -4.80 77.05
REMARK 500 ASN A 246 73.59 -153.41
REMARK 500 TYR A 276 -9.91 76.61
REMARK 500 ALA B 13 26.26 -140.10
REMARK 500
REMARK 500 REMARK: NULL
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 ZN A 501 ZN
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 HIS A 199 NE2
REMARK 620 2 ASP A 201 OD2 103.5
REMARK 620 3 HIS A 279 NE2 95.3 89.9
REMARK 620 4 QW2 A 505 O01 84.8 170.8 93.3
REMARK 620 5 QW2 A 505 O02 152.8 92.0 107.1 78.8
REMARK 620 N 1 2 3 4
DBREF 7A1P A 1 349 UNP Q9NWT6 HIF1N_HUMAN 1 349
DBREF 7A1P B 1 20 PDB 7A1P 7A1P 1 20
SEQRES 1 A 349 MET ALA ALA THR ALA ALA GLU ALA VAL ALA SER GLY SER
SEQRES 2 A 349 GLY GLU PRO ARG GLU GLU ALA GLY ALA LEU GLY PRO ALA
SEQRES 3 A 349 TRP ASP GLU SER GLN LEU ARG SER TYR SER PHE PRO THR
SEQRES 4 A 349 ARG PRO ILE PRO ARG LEU SER GLN SER ASP PRO ARG ALA
SEQRES 5 A 349 GLU GLU LEU ILE GLU ASN GLU GLU PRO VAL VAL LEU THR
SEQRES 6 A 349 ASP THR ASN LEU VAL TYR PRO ALA LEU LYS TRP ASP LEU
SEQRES 7 A 349 GLU TYR LEU GLN GLU ASN ILE GLY ASN GLY ASP PHE SER
SEQRES 8 A 349 VAL TYR SER ALA SER THR HIS LYS PHE LEU TYR TYR ASP
SEQRES 9 A 349 GLU LYS LYS MET ALA ASN PHE GLN ASN PHE LYS PRO ARG
SEQRES 10 A 349 SER ASN ARG GLU GLU MET LYS PHE HIS GLU PHE VAL GLU
SEQRES 11 A 349 LYS LEU GLN ASP ILE GLN GLN ARG GLY GLY GLU GLU ARG
SEQRES 12 A 349 LEU TYR LEU GLN GLN THR LEU ASN ASP THR VAL GLY ARG
SEQRES 13 A 349 LYS ILE VAL MET ASP PHE LEU GLY PHE ASN TRP ASN TRP
SEQRES 14 A 349 ILE ASN LYS GLN GLN GLY LYS ARG GLY TRP GLY GLN LEU
SEQRES 15 A 349 THR SER ASN LEU LEU LEU ILE GLY MET GLU GLY ASN VAL
SEQRES 16 A 349 THR PRO ALA HIS TYR ASP GLU GLN GLN ASN PHE PHE ALA
SEQRES 17 A 349 GLN ILE LYS GLY TYR LYS ARG CYS ILE LEU PHE PRO PRO
SEQRES 18 A 349 ASP GLN PHE GLU CYS LEU TYR PRO TYR PRO VAL HIS HIS
SEQRES 19 A 349 PRO CYS ASP ARG GLN SER GLN VAL ASP PHE ASP ASN PRO
SEQRES 20 A 349 ASP TYR GLU ARG PHE PRO ASN PHE GLN ASN VAL VAL GLY
SEQRES 21 A 349 TYR GLU THR VAL VAL GLY PRO GLY ASP VAL LEU TYR ILE
SEQRES 22 A 349 PRO MET TYR TRP TRP HIS HIS ILE GLU SER LEU LEU ASN
SEQRES 23 A 349 GLY GLY ILE THR ILE THR VAL ASN PHE TRP TYR LYS GLY
SEQRES 24 A 349 ALA PRO THR PRO LYS ARG ILE GLU TYR PRO LEU LYS ALA
SEQRES 25 A 349 HIS GLN LYS VAL ALA ILE MET ARG ASN ILE GLU LYS MET
SEQRES 26 A 349 LEU GLY GLU ALA LEU GLY ASN PRO GLN GLU VAL GLY PRO
SEQRES 27 A 349 LEU LEU ASN THR MET ILE LYS GLY ARG TYR ASN
SEQRES 1 B 20 HIS LEU GLU VAL VAL LYS LEU LEU LEU GLU ALA GLY ALA
SEQRES 2 B 20 ASP VAL ASN ALA GLN ASP LYS
HET ZN A 501 1
HET SO4 A 502 5
HET SO4 A 503 5
HET SO4 A 504 5
HET QW2 A 505 23
HETNAM ZN ZINC ION
HETNAM SO4 SULFATE ION
HETNAM QW2 (4~{S})-2-OXIDANYLIDENE-4-PROPYL-PENTANEDIOIC ACID
FORMUL 3 ZN ZN 2+
FORMUL 4 SO4 3(O4 S 2-)
FORMUL 7 QW2 C8 H12 O5
FORMUL 8 HOH *235(H2 O)
HELIX 1 AA1 ASP A 28 LEU A 32 5 5
HELIX 2 AA2 ASP A 49 ASN A 58 1 10
HELIX 3 AA3 VAL A 70 TRP A 76 5 7
HELIX 4 AA4 ASP A 77 ILE A 85 1 9
HELIX 5 AA5 ASP A 104 PHE A 111 5 8
HELIX 6 AA6 LYS A 124 GLY A 139 1 16
HELIX 7 AA7 GLY A 155 GLY A 164 1 10
HELIX 8 AA8 ASN A 166 GLY A 178 1 13
HELIX 9 AA9 PRO A 220 ASP A 222 5 3
HELIX 10 AB1 GLN A 223 TYR A 228 1 6
HELIX 11 AB2 PHE A 252 VAL A 258 5 7
HELIX 12 AB3 LYS A 311 GLY A 331 1 21
HELIX 13 AB4 ASN A 332 GLN A 334 5 3
HELIX 14 AB5 GLU A 335 LYS A 345 1 11
HELIX 15 AB6 VAL B 4 GLU B 10 1 7
SHEET 1 AA1 2 GLU A 18 GLU A 19 0
SHEET 2 AA1 2 GLY A 24 PRO A 25 -1 O GLY A 24 N GLU A 19
SHEET 1 AA2 5 THR A 39 PRO A 41 0
SHEET 2 AA2 5 GLY A 260 VAL A 265 1 O GLU A 262 N ARG A 40
SHEET 3 AA2 5 LYS A 214 PHE A 219 -1 N LEU A 218 O TYR A 261
SHEET 4 AA2 5 TRP A 278 SER A 283 -1 O HIS A 280 N ILE A 217
SHEET 5 AA2 5 VAL A 195 HIS A 199 -1 N THR A 196 O ILE A 281
SHEET 1 AA3 9 ARG A 44 LEU A 45 0
SHEET 2 AA3 9 VAL A 62 LEU A 64 1 O VAL A 63 N LEU A 45
SHEET 3 AA3 9 VAL A 270 ILE A 273 -1 O VAL A 270 N LEU A 64
SHEET 4 AA3 9 GLN A 204 LYS A 211 -1 N PHE A 207 O LEU A 271
SHEET 5 AA3 9 THR A 290 TYR A 297 -1 O TYR A 297 N GLN A 204
SHEET 6 AA3 9 LEU A 186 GLY A 190 -1 N LEU A 188 O THR A 292
SHEET 7 AA3 9 ARG A 143 THR A 149 -1 N GLN A 148 O LEU A 187
SHEET 8 AA3 9 PHE A 90 ALA A 95 -1 N TYR A 93 O TYR A 145
SHEET 9 AA3 9 SER A 118 MET A 123 -1 O MET A 123 N PHE A 90
SHEET 1 AA4 6 ARG A 44 LEU A 45 0
SHEET 2 AA4 6 VAL A 62 LEU A 64 1 O VAL A 63 N LEU A 45
SHEET 3 AA4 6 VAL A 270 ILE A 273 -1 O VAL A 270 N LEU A 64
SHEET 4 AA4 6 GLN A 204 LYS A 211 -1 N PHE A 207 O LEU A 271
SHEET 5 AA4 6 THR A 290 TYR A 297 -1 O TYR A 297 N GLN A 204
SHEET 6 AA4 6 LEU A 182 SER A 184 -1 N THR A 183 O TRP A 296
LINK NE2 HIS A 199 ZN ZN A 501 1555 1555 2.10
LINK OD2 ASP A 201 ZN ZN A 501 1555 1555 2.09
LINK NE2 HIS A 279 ZN ZN A 501 1555 1555 2.02
LINK ZN ZN A 501 O01 QW2 A 505 1555 1555 2.26
LINK ZN ZN A 501 O02 QW2 A 505 1555 1555 2.07
CISPEP 1 TYR A 308 PRO A 309 0 -2.60
CRYST1 85.945 85.945 147.628 90.00 90.00 90.00 P 41 21 2 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.011635 0.000000 0.000000 0.00000
SCALE2 0.000000 0.011635 0.000000 0.00000
SCALE3 0.000000 0.000000 0.006774 0.00000