HEADER RNA BINDING PROTEIN 14-AUG-20 7A1V TITLE CRYSTAL STRUCTURE OF YTHDF2 IN COMPLEX WITH M1A COMPND MOL_ID: 1; COMPND 2 MOLECULE: YTH DOMAIN-CONTAINING FAMILY PROTEIN 2; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CLL-ASSOCIATED ANTIGEN KW-14,HIGH-GLUCOSE-REGULATED PROTEIN COMPND 5 8,RENAL CARCINOMA ANTIGEN NY-REN-2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: YTHDF2, HGRG8; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS EPITRANSCRIPTOMIC READER, RNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR X.WANG,A.CAFLISCH REVDAT 2 31-JAN-24 7A1V 1 REMARK REVDAT 1 25-AUG-21 7A1V 0 JRNL AUTH X.WANG,A.CAFLISCH JRNL TITL CRYSTAL STRUCTURE OF YTHDF2 IN COMPLEX WITH M1A JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874+SVN REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.87 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 20782 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1040 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.8700 - 4.2100 1.00 2846 150 0.1923 0.2340 REMARK 3 2 4.2100 - 3.3400 1.00 2849 150 0.1987 0.2131 REMARK 3 3 3.3400 - 2.9200 1.00 2811 148 0.2432 0.2961 REMARK 3 4 2.9200 - 2.6500 1.00 2803 148 0.2725 0.2856 REMARK 3 5 2.6500 - 2.4600 1.00 2847 150 0.2765 0.3257 REMARK 3 6 2.4600 - 2.3200 1.00 2789 146 0.2706 0.2873 REMARK 3 7 2.3200 - 2.2000 1.00 2797 148 0.2986 0.3422 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.303 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.025 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 49.21 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.29 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2479 REMARK 3 ANGLE : 0.485 3365 REMARK 3 CHIRALITY : 0.046 347 REMARK 3 PLANARITY : 0.003 430 REMARK 3 DIHEDRAL : 17.432 865 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "A" and (resid 401 through 404 or REMARK 3 (resid 405 through 408 and (name N or REMARK 3 name CA or name C or name O or name CB )) REMARK 3 or resid 409 through 489 or (resid 490 REMARK 3 and (name N or name CA or name C or name REMARK 3 O or name CB )) or resid 491 or (resid REMARK 3 492 and (name N or name CA or name C or REMARK 3 name O or name CB )) or resid 493 through REMARK 3 497 or (resid 498 and (name N or name CA REMARK 3 or name C or name O or name CB )) or REMARK 3 resid 499 through 502 or (resid 503 and REMARK 3 (name N or name CA or name C or name O or REMARK 3 name CB )) or resid 504 through 511 or REMARK 3 resid 513 through 520 or (resid 521 and REMARK 3 (name N or name CA or name C or name O or REMARK 3 name CB )) or resid 522 through 547 or REMARK 3 (resid 548 and (name N or name CA or name REMARK 3 C or name O or name CB )))) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "B" and ((resid 401 and (name N or REMARK 3 name CA or name C or name O or name CB )) REMARK 3 or resid 402 through 406 or (resid 407 REMARK 3 through 408 and (name N or name CA or REMARK 3 name C or name O or name CB )) or resid REMARK 3 409 through 510 or (resid 511 and (name N REMARK 3 or name CA or name C or name O or name CB REMARK 3 )) or resid 513 through 537 or (resid 538 REMARK 3 and (name N or name CA or name C or name REMARK 3 O or name CB )) or resid 539 through 548)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7A1V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-AUG-20. REMARK 100 THE DEPOSITION ID IS D_1292110738. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-FEB-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.8-5.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40931 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 43.870 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 31.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.010 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4WQN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM CITRATE TRIBASIC DIHYDRATE REMARK 280 PH 5.2, 2 M AMMONIUM SULFATE., VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.70867 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 37.85433 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 56.78150 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 18.92717 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 94.63583 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 386 REMARK 465 GLY A 387 REMARK 465 SER A 388 REMARK 465 SER A 389 REMARK 465 TYR A 390 REMARK 465 HIS A 391 REMARK 465 HIS A 392 REMARK 465 HIS A 393 REMARK 465 HIS A 394 REMARK 465 HIS A 395 REMARK 465 HIS A 396 REMARK 465 SER A 397 REMARK 465 SER A 398 REMARK 465 GLY A 399 REMARK 465 GLU A 400 REMARK 465 THR A 550 REMARK 465 THR A 551 REMARK 465 SER A 552 REMARK 465 MET B 386 REMARK 465 GLY B 387 REMARK 465 SER B 388 REMARK 465 SER B 389 REMARK 465 TYR B 390 REMARK 465 HIS B 391 REMARK 465 HIS B 392 REMARK 465 HIS B 393 REMARK 465 HIS B 394 REMARK 465 HIS B 395 REMARK 465 HIS B 396 REMARK 465 SER B 397 REMARK 465 SER B 398 REMARK 465 GLY B 399 REMARK 465 HIS B 549 REMARK 465 THR B 550 REMARK 465 THR B 551 REMARK 465 SER B 552 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 401 CG OD1 ND2 REMARK 470 MET A 407 CG SD CE REMARK 470 LYS A 408 CG CD CE NZ REMARK 470 LYS A 452 CG CD CE NZ REMARK 470 ARG A 511 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 538 CG CD CE NZ REMARK 470 LYS A 542 CG CD CE NZ REMARK 470 HIS A 549 CG ND1 CD2 CE1 NE2 REMARK 470 GLN B 405 CG CD OE1 NE2 REMARK 470 HIS B 406 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 408 CG CD CE NZ REMARK 470 LYS B 452 CG CD CE NZ REMARK 470 LYS B 490 CG CD CE NZ REMARK 470 LYS B 492 CG CD CE NZ REMARK 470 ARG B 498 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 503 CG CD CE NZ REMARK 470 LYS B 521 CG CD CE NZ REMARK 470 LYS B 542 CG CD CE NZ REMARK 470 LYS B 548 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 434 -166.97 -126.90 REMARK 500 TRP A 486 -167.50 -104.50 REMARK 500 THR B 481 -168.98 -129.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue M1A A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 705 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 704 DBREF 7A1V A 408 552 UNP Q9Y5A9 YTHD2_HUMAN 408 552 DBREF 7A1V B 408 552 UNP Q9Y5A9 YTHD2_HUMAN 408 552 SEQADV 7A1V MET A 386 UNP Q9Y5A9 INITIATING METHIONINE SEQADV 7A1V GLY A 387 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V SER A 388 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V SER A 389 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V TYR A 390 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V HIS A 391 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V HIS A 392 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V HIS A 393 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V HIS A 394 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V HIS A 395 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V HIS A 396 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V SER A 397 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V SER A 398 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V GLY A 399 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V GLU A 400 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V ASN A 401 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V LEU A 402 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V TYR A 403 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V PHE A 404 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V GLN A 405 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V HIS A 406 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V MET A 407 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V MET B 386 UNP Q9Y5A9 INITIATING METHIONINE SEQADV 7A1V GLY B 387 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V SER B 388 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V SER B 389 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V TYR B 390 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V HIS B 391 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V HIS B 392 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V HIS B 393 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V HIS B 394 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V HIS B 395 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V HIS B 396 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V SER B 397 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V SER B 398 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V GLY B 399 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V GLU B 400 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V ASN B 401 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V LEU B 402 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V TYR B 403 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V PHE B 404 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V GLN B 405 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V HIS B 406 UNP Q9Y5A9 EXPRESSION TAG SEQADV 7A1V MET B 407 UNP Q9Y5A9 EXPRESSION TAG SEQRES 1 A 167 MET GLY SER SER TYR HIS HIS HIS HIS HIS HIS SER SER SEQRES 2 A 167 GLY GLU ASN LEU TYR PHE GLN HIS MET LYS HIS GLY ARG SEQRES 3 A 167 VAL PHE ILE ILE LYS SER TYR SER GLU ASP ASP ILE HIS SEQRES 4 A 167 ARG SER ILE LYS TYR ASN ILE TRP CYS SER THR GLU HIS SEQRES 5 A 167 GLY ASN LYS ARG LEU ASP ALA ALA TYR ARG SER MET ASN SEQRES 6 A 167 GLY LYS GLY PRO VAL TYR LEU LEU PHE SER VAL ASN GLY SEQRES 7 A 167 SER GLY HIS PHE CYS GLY VAL ALA GLU MET LYS SER ALA SEQRES 8 A 167 VAL ASP TYR ASN THR CYS ALA GLY VAL TRP SER GLN ASP SEQRES 9 A 167 LYS TRP LYS GLY ARG PHE ASP VAL ARG TRP ILE PHE VAL SEQRES 10 A 167 LYS ASP VAL PRO ASN SER GLN LEU ARG HIS ILE ARG LEU SEQRES 11 A 167 GLU ASN ASN GLU ASN LYS PRO VAL THR ASN SER ARG ASP SEQRES 12 A 167 THR GLN GLU VAL PRO LEU GLU LYS ALA LYS GLN VAL LEU SEQRES 13 A 167 LYS ILE ILE ALA SER TYR LYS HIS THR THR SER SEQRES 1 B 167 MET GLY SER SER TYR HIS HIS HIS HIS HIS HIS SER SER SEQRES 2 B 167 GLY GLU ASN LEU TYR PHE GLN HIS MET LYS HIS GLY ARG SEQRES 3 B 167 VAL PHE ILE ILE LYS SER TYR SER GLU ASP ASP ILE HIS SEQRES 4 B 167 ARG SER ILE LYS TYR ASN ILE TRP CYS SER THR GLU HIS SEQRES 5 B 167 GLY ASN LYS ARG LEU ASP ALA ALA TYR ARG SER MET ASN SEQRES 6 B 167 GLY LYS GLY PRO VAL TYR LEU LEU PHE SER VAL ASN GLY SEQRES 7 B 167 SER GLY HIS PHE CYS GLY VAL ALA GLU MET LYS SER ALA SEQRES 8 B 167 VAL ASP TYR ASN THR CYS ALA GLY VAL TRP SER GLN ASP SEQRES 9 B 167 LYS TRP LYS GLY ARG PHE ASP VAL ARG TRP ILE PHE VAL SEQRES 10 B 167 LYS ASP VAL PRO ASN SER GLN LEU ARG HIS ILE ARG LEU SEQRES 11 B 167 GLU ASN ASN GLU ASN LYS PRO VAL THR ASN SER ARG ASP SEQRES 12 B 167 THR GLN GLU VAL PRO LEU GLU LYS ALA LYS GLN VAL LEU SEQRES 13 B 167 LYS ILE ILE ALA SER TYR LYS HIS THR THR SER HET M1A A 701 11 HET SO4 A 702 5 HET SO4 A 703 5 HET SO4 A 704 5 HET SO4 A 705 5 HET GOL B 701 6 HET SO4 B 702 5 HET SO4 B 703 5 HET SO4 B 704 5 HETNAM M1A 6-AMINO-1-METHYLPURINE HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 M1A C6 H8 N5 1+ FORMUL 4 SO4 7(O4 S 2-) FORMUL 8 GOL C3 H8 O3 FORMUL 12 HOH *67(H2 O) HELIX 1 AA1 SER A 419 ASN A 430 1 12 HELIX 2 AA2 THR A 435 ASN A 450 1 16 HELIX 3 AA3 SER A 508 LEU A 510 5 3 HELIX 4 AA4 PRO A 522 SER A 526 5 5 HELIX 5 AA5 PRO A 533 TYR A 547 1 15 HELIX 6 AA6 SER B 419 ASN B 430 1 12 HELIX 7 AA7 THR B 435 ASN B 450 1 16 HELIX 8 AA8 SER B 508 LEU B 510 5 3 HELIX 9 AA9 LEU B 515 GLU B 519 5 5 HELIX 10 AB1 PRO B 522 SER B 526 5 5 HELIX 11 AB2 PRO B 533 TYR B 547 1 15 SHEET 1 AA1 6 ILE A 431 TRP A 432 0 SHEET 2 AA1 6 PHE A 495 PRO A 506 -1 O PHE A 495 N TRP A 432 SHEET 3 AA1 6 HIS A 466 MET A 473 -1 N PHE A 467 O VAL A 505 SHEET 4 AA1 6 VAL A 455 VAL A 461 -1 N LEU A 457 O ALA A 471 SHEET 5 AA1 6 ARG A 411 SER A 417 1 N ILE A 415 O LEU A 458 SHEET 6 AA1 6 GLU A 531 VAL A 532 -1 O VAL A 532 N VAL A 412 SHEET 1 AA2 4 ILE B 431 TRP B 432 0 SHEET 2 AA2 4 PHE B 495 PHE B 501 -1 O PHE B 495 N TRP B 432 SHEET 3 AA2 4 HIS B 466 MET B 473 -1 N VAL B 470 O ILE B 500 SHEET 4 AA2 4 VAL B 505 PRO B 506 -1 O VAL B 505 N PHE B 467 SHEET 1 AA3 6 ILE B 431 TRP B 432 0 SHEET 2 AA3 6 PHE B 495 PHE B 501 -1 O PHE B 495 N TRP B 432 SHEET 3 AA3 6 HIS B 466 MET B 473 -1 N VAL B 470 O ILE B 500 SHEET 4 AA3 6 VAL B 455 VAL B 461 -1 N LEU B 457 O ALA B 471 SHEET 5 AA3 6 ARG B 411 SER B 417 1 N ILE B 415 O LEU B 458 SHEET 6 AA3 6 GLU B 531 VAL B 532 -1 O VAL B 532 N VAL B 412 SITE 1 AC1 9 LYS A 416 SER A 417 TYR A 418 ASP A 422 SITE 2 AC1 9 TRP A 432 CYS A 433 TRP A 491 ASP A 528 SITE 3 AC1 9 HOH A 822 SITE 1 AC2 4 ARG A 425 LYS A 428 TYR A 429 LYS A 536 SITE 1 AC3 3 ASN A 401 ILE B 500 VAL B 502 SITE 1 AC4 1 ASN A 507 SITE 1 AC5 7 LYS A 416 VAL A 461 GLY A 463 SER A 464 SITE 2 AC5 7 GLY A 465 ASN A 507 THR A 524 SITE 1 AC6 4 THR B 435 GLU B 436 GLN B 488 TRP B 491 SITE 1 AC7 4 ARG B 425 LYS B 428 TYR B 429 LYS B 536 SITE 1 AC8 1 ASN B 507 SITE 1 AC9 7 LYS B 416 VAL B 461 GLY B 463 SER B 464 SITE 2 AC9 7 GLY B 465 ASN B 507 THR B 524 CRYST1 79.781 79.781 113.563 90.00 90.00 120.00 P 65 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012534 0.007237 0.000000 0.00000 SCALE2 0.000000 0.014473 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008806 0.00000 MTRIX1 1 -0.987131 0.129826 0.093371 79.45536 1 MTRIX2 1 0.125437 0.990767 -0.051450 -1.32522 1 MTRIX3 1 -0.099189 -0.039076 -0.994301 20.23919 1