HEADER CHAPERONE 20-AUG-20 7A4V TITLE CRYSTAL STRUCTURE OF LID-TRUNCATED ADP-BOUND BIP IN AN OLIGOMERIC TITLE 2 STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDOPLASMIC RETICULUM CHAPERONE BIP; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 78 KDA GLUCOSE-REGULATED PROTEIN,GRP-78,BINDING- COMPND 5 IMMUNOGLOBULIN PROTEIN,BIP,HEAT SHOCK PROTEIN 70 FAMILY PROTEIN 5, COMPND 6 HSP70 FAMILY PROTEIN 5,HEAT SHOCK PROTEIN FAMILY A MEMBER 5, COMPND 7 IMMUNOGLOBULIN HEAVY CHAIN-BINDING PROTEIN; COMPND 8 EC: 3.6.4.10; COMPND 9 ENGINEERED: YES; COMPND 10 MUTATION: YES; COMPND 11 OTHER_DETAILS: SER27 IS THE REMNANTS OF AN EXPRESSION TAG SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRICETULUS GRISEUS; SOURCE 3 ORGANISM_COMMON: CHINESE HAMSTER; SOURCE 4 ORGANISM_TAXID: 10029; SOURCE 5 GENE: HSPA5, GRP78, I79_019946; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI M15; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 1007065 KEYWDS ER, ENDOPLASMIC RETICULUM, HSP70, GRP78, CHAPERONE EXPDTA X-RAY DIFFRACTION AUTHOR L.A.PERERA,D.RON REVDAT 2 31-JAN-24 7A4V 1 REMARK REVDAT 1 16-DEC-20 7A4V 0 JRNL AUTH S.PREISSLER,C.RATO,Y.YAN,L.A.PERERA,A.CZAKO,D.RON JRNL TITL CALCIUM DEPLETION CHALLENGES ENDOPLASMIC RETICULUM JRNL TITL 2 PROTEOSTASIS BY DESTABILISING BIP-SUBSTRATE COMPLEXES. JRNL REF ELIFE V. 9 2020 JRNL REFN ESSN 2050-084X JRNL PMID 33295873 JRNL DOI 10.7554/ELIFE.62601 REMARK 2 REMARK 2 RESOLUTION. 1.94 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.94 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.27 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 41507 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2186 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.94 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2926 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.68 REMARK 3 BIN R VALUE (WORKING SET) : 0.2720 REMARK 3 BIN FREE R VALUE SET COUNT : 138 REMARK 3 BIN FREE R VALUE : 0.3060 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3937 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 40 REMARK 3 SOLVENT ATOMS : 316 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.58000 REMARK 3 B22 (A**2) : -1.35000 REMARK 3 B33 (A**2) : -0.07000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.44000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.154 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.145 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.113 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.117 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4082 ; 0.006 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3898 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5535 ; 1.333 ; 1.650 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8977 ; 1.233 ; 1.585 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 528 ; 6.500 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 193 ;32.622 ;23.834 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 691 ;13.618 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;14.586 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 563 ; 0.056 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4664 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 867 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7A4V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-AUG-20. REMARK 100 THE DEPOSITION ID IS D_1292110839. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-AUG-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9762 REMARK 200 MONOCHROMATOR : M REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43705 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.940 REMARK 200 RESOLUTION RANGE LOW (A) : 29.270 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.94 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.99 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6HAB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M POTASSIUM CITRATE TRIBASIC REMARK 280 MONOHYDRATE, 20% PEG 3350, PH 8.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 25.62450 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -50.17900 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 25.62450 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 27 REMARK 465 ALA A 549 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 29 OG1 CG2 REMARK 470 SER A 86 OG REMARK 470 ASN A 87 CG OD1 ND2 REMARK 470 LYS A 118 CG CD CE NZ REMARK 470 LYS A 123 CG CD CE NZ REMARK 470 GLU A 215 CG CD OE1 OE2 REMARK 470 LYS A 276 CG CD CE NZ REMARK 470 ARG A 279 CD NE CZ NH1 NH2 REMARK 470 LYS A 280 CG CD CE NZ REMARK 470 ARG A 283 CD NE CZ NH1 NH2 REMARK 470 LYS A 294 CG CD CE NZ REMARK 470 ARG A 306 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 310 CG CD OE1 OE2 REMARK 470 SER A 311 OG REMARK 470 GLU A 316 CG CD OE1 OE2 REMARK 470 ASP A 317 CG OD1 OD2 REMARK 470 LYS A 352 CG CD CE NZ REMARK 470 ARG A 386 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 409 CG CD OE1 NE2 REMARK 470 THR A 527 OG1 CG2 REMARK 470 ASN A 528 CG OD1 ND2 REMARK 470 ASP A 529 CG OD1 OD2 REMARK 470 ARG A 532 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 536 CG CD OE1 OE2 REMARK 470 ARG A 540 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 83 108.73 -58.09 REMARK 500 LYS A 280 -2.89 76.09 REMARK 500 GLU A 314 55.36 71.99 REMARK 500 GLN A 530 -12.30 78.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 604 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 34 OD2 REMARK 620 2 TYR A 39 O 108.1 REMARK 620 3 ADP A 601 O1B 154.3 65.5 REMARK 620 4 ADP A 601 O3A 151.2 95.6 51.8 REMARK 620 5 HOH A 788 O 69.9 113.9 89.4 115.5 REMARK 620 6 HOH A 834 O 89.7 92.0 114.8 72.9 150.7 REMARK 620 7 HOH A 928 O 70.4 174.5 118.2 84.4 70.9 82.7 REMARK 620 N 1 2 3 4 5 6 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6HAB RELATED DB: PDB REMARK 900 SAME CONSTRUCT WITHOUT A T229A MUTATION, WITH THE SAME OLIGOMERIC REMARK 900 CRYSTAL PACKING, BUT LACKING A RESOLVED SBDA. DBREF 7A4V A 28 549 UNP G3I8R9 BIP_CRIGR 28 549 SEQADV 7A4V SER A 27 UNP G3I8R9 EXPRESSION TAG SEQADV 7A4V ALA A 229 UNP G3I8R9 THR 229 ENGINEERED MUTATION SEQADV 7A4V PHE A 461 UNP G3I8R9 VAL 461 ENGINEERED MUTATION SEQRES 1 A 523 SER GLY THR VAL VAL GLY ILE ASP LEU GLY THR THR TYR SEQRES 2 A 523 SER CYS VAL GLY VAL PHE LYS ASN GLY ARG VAL GLU ILE SEQRES 3 A 523 ILE ALA ASN ASP GLN GLY ASN ARG ILE THR PRO SER TYR SEQRES 4 A 523 VAL ALA PHE THR PRO GLU GLY GLU ARG LEU ILE GLY ASP SEQRES 5 A 523 ALA ALA LYS ASN GLN LEU THR SER ASN PRO GLU ASN THR SEQRES 6 A 523 VAL PHE ASP ALA LYS ARG LEU ILE GLY ARG THR TRP ASN SEQRES 7 A 523 ASP PRO SER VAL GLN GLN ASP ILE LYS PHE LEU PRO PHE SEQRES 8 A 523 LYS VAL VAL GLU LYS LYS THR LYS PRO TYR ILE GLN VAL SEQRES 9 A 523 ASP ILE GLY GLY GLY GLN THR LYS THR PHE ALA PRO GLU SEQRES 10 A 523 GLU ILE SER ALA MET VAL LEU THR LYS MET LYS GLU THR SEQRES 11 A 523 ALA GLU ALA TYR LEU GLY LYS LYS VAL THR HIS ALA VAL SEQRES 12 A 523 VAL THR VAL PRO ALA TYR PHE ASN ASP ALA GLN ARG GLN SEQRES 13 A 523 ALA THR LYS ASP ALA GLY THR ILE ALA GLY LEU ASN VAL SEQRES 14 A 523 MET ARG ILE ILE ASN GLU PRO THR ALA ALA ALA ILE ALA SEQRES 15 A 523 TYR GLY LEU ASP LYS ARG GLU GLY GLU LYS ASN ILE LEU SEQRES 16 A 523 VAL PHE ASP LEU GLY GLY GLY ALA PHE ASP VAL SER LEU SEQRES 17 A 523 LEU THR ILE ASP ASN GLY VAL PHE GLU VAL VAL ALA THR SEQRES 18 A 523 ASN GLY ASP THR HIS LEU GLY GLY GLU ASP PHE ASP GLN SEQRES 19 A 523 ARG VAL MET GLU HIS PHE ILE LYS LEU TYR LYS LYS LYS SEQRES 20 A 523 THR GLY LYS ASP VAL ARG LYS ASP ASN ARG ALA VAL GLN SEQRES 21 A 523 LYS LEU ARG ARG GLU VAL GLU LYS ALA LYS ARG ALA LEU SEQRES 22 A 523 SER SER GLN HIS GLN ALA ARG ILE GLU ILE GLU SER PHE SEQRES 23 A 523 PHE GLU GLY GLU ASP PHE SER GLU THR LEU THR ARG ALA SEQRES 24 A 523 LYS PHE GLU GLU LEU ASN MET ASP LEU PHE ARG SER THR SEQRES 25 A 523 MET LYS PRO VAL GLN LYS VAL LEU GLU ASP SER ASP LEU SEQRES 26 A 523 LYS LYS SER ASP ILE ASP GLU ILE VAL LEU VAL GLY GLY SEQRES 27 A 523 SER THR ARG ILE PRO LYS ILE GLN GLN LEU VAL LYS GLU SEQRES 28 A 523 PHE PHE ASN GLY LYS GLU PRO SER ARG GLY ILE ASN PRO SEQRES 29 A 523 ASP GLU ALA VAL ALA TYR GLY ALA ALA VAL GLN ALA GLY SEQRES 30 A 523 VAL LEU SER GLY ASP GLN ASP THR GLY ASP LEU VAL LEU SEQRES 31 A 523 LEU ASP VAL CYS PRO LEU THR LEU GLY ILE GLU THR VAL SEQRES 32 A 523 GLY GLY VAL MET THR LYS LEU ILE PRO ARG ASN THR VAL SEQRES 33 A 523 VAL PRO THR LYS LYS SER GLN ILE PHE SER THR ALA SER SEQRES 34 A 523 ASP ASN GLN PRO THR PHE THR ILE LYS VAL TYR GLU GLY SEQRES 35 A 523 GLU ARG PRO LEU THR LYS ASP ASN HIS LEU LEU GLY THR SEQRES 36 A 523 PHE ASP LEU THR GLY ILE PRO PRO ALA PRO ARG GLY VAL SEQRES 37 A 523 PRO GLN ILE GLU VAL THR PHE GLU ILE ASP VAL ASN GLY SEQRES 38 A 523 ILE LEU ARG VAL THR ALA GLU ASP LYS GLY THR GLY ASN SEQRES 39 A 523 LYS ASN LYS ILE THR ILE THR ASN ASP GLN ASN ARG LEU SEQRES 40 A 523 THR PRO GLU GLU ILE GLU ARG MET VAL ASN ASP ALA GLU SEQRES 41 A 523 LYS PHE ALA HET ADP A 601 27 HET GOL A 602 6 HET GOL A 603 6 HET K A 604 1 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM GOL GLYCEROL HETNAM K POTASSIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 ADP C10 H15 N5 O10 P2 FORMUL 3 GOL 2(C3 H8 O3) FORMUL 5 K K 1+ FORMUL 6 HOH *316(H2 O) HELIX 1 AA1 GLY A 77 GLN A 83 1 7 HELIX 2 AA2 ASN A 87 GLU A 89 5 3 HELIX 3 AA3 ASP A 94 LEU A 98 5 5 HELIX 4 AA4 ASP A 105 LYS A 113 1 9 HELIX 5 AA5 ALA A 141 GLY A 162 1 22 HELIX 6 AA6 ASN A 177 ALA A 191 1 15 HELIX 7 AA7 GLU A 201 TYR A 209 1 9 HELIX 8 AA8 GLY A 254 GLY A 275 1 22 HELIX 9 AA9 ASP A 281 LEU A 299 1 19 HELIX 10 AB1 ARG A 324 THR A 338 1 15 HELIX 11 AB2 THR A 338 SER A 349 1 12 HELIX 12 AB3 LYS A 352 ILE A 356 5 5 HELIX 13 AB4 GLY A 363 ARG A 367 5 5 HELIX 14 AB5 ILE A 368 PHE A 379 1 12 HELIX 15 AB6 GLU A 392 SER A 406 1 15 HELIX 16 AB7 GLY A 407 ASP A 410 5 4 HELIX 17 AB8 LEU A 472 ASN A 476 5 5 HELIX 18 AB9 THR A 534 ASN A 543 1 10 SHEET 1 AA1 3 ARG A 49 ILE A 52 0 SHEET 2 AA1 3 TYR A 39 LYS A 46 -1 N LYS A 46 O ARG A 49 SHEET 3 AA1 3 THR A 62 PRO A 63 -1 O THR A 62 N SER A 40 SHEET 1 AA2 5 ARG A 49 ILE A 52 0 SHEET 2 AA2 5 TYR A 39 LYS A 46 -1 N LYS A 46 O ARG A 49 SHEET 3 AA2 5 VAL A 30 ASP A 34 -1 N GLY A 32 O GLY A 43 SHEET 4 AA2 5 HIS A 167 VAL A 172 1 O VAL A 169 N ILE A 33 SHEET 5 AA2 5 ASN A 194 ASN A 200 1 O ASN A 194 N ALA A 168 SHEET 1 AA3 3 ARG A 74 ILE A 76 0 SHEET 2 AA3 3 VAL A 66 PHE A 68 -1 N ALA A 67 O LEU A 75 SHEET 3 AA3 3 THR A 91 VAL A 92 -1 O VAL A 92 N VAL A 66 SHEET 1 AA4 3 LYS A 118 LYS A 122 0 SHEET 2 AA4 3 LYS A 125 ASP A 131 -1 O TYR A 127 N VAL A 120 SHEET 3 AA4 3 THR A 137 PHE A 140 -1 O PHE A 140 N ILE A 128 SHEET 1 AA5 4 VAL A 241 ASP A 250 0 SHEET 2 AA5 4 PHE A 230 ASP A 238 -1 N LEU A 234 O VAL A 245 SHEET 3 AA5 4 GLU A 217 LEU A 225 -1 N ILE A 220 O LEU A 235 SHEET 4 AA5 4 GLU A 358 VAL A 362 1 O VAL A 360 N PHE A 223 SHEET 1 AA6 2 GLN A 304 PHE A 313 0 SHEET 2 AA6 2 GLU A 316 THR A 323 -1 O GLU A 320 N ILE A 307 SHEET 1 AA7 4 VAL A 432 ILE A 437 0 SHEET 2 AA7 4 LEU A 424 THR A 428 -1 N LEU A 424 O LEU A 436 SHEET 3 AA7 4 PHE A 461 GLU A 467 -1 O TYR A 466 N GLY A 425 SHEET 4 AA7 4 HIS A 477 LEU A 484 -1 O LEU A 479 N VAL A 465 SHEET 1 AA8 4 THR A 445 PHE A 451 0 SHEET 2 AA8 4 ILE A 497 ILE A 503 -1 O ILE A 497 N PHE A 451 SHEET 3 AA8 4 LEU A 509 ASP A 515 -1 O GLU A 514 N GLU A 498 SHEET 4 AA8 4 LYS A 521 ILE A 526 -1 O ILE A 526 N LEU A 509 LINK OD2 ASP A 34 K K A 604 1555 1555 2.72 LINK O TYR A 39 K K A 604 1555 1555 2.70 LINK O1B ADP A 601 K K A 604 1555 1555 2.74 LINK O3A ADP A 601 K K A 604 1555 1555 2.75 LINK K K A 604 O HOH A 788 1555 1555 2.72 LINK K K A 604 O HOH A 834 1555 1555 2.70 LINK K K A 604 O HOH A 928 1555 1555 2.69 CISPEP 1 VAL A 443 PRO A 444 0 -0.09 CRYST1 50.179 51.249 118.801 90.00 99.77 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019929 0.000000 0.003432 0.00000 SCALE2 0.000000 0.019513 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008541 0.00000