HEADER VIRAL PROTEIN 20-AUG-20 7A56 TITLE SCHMALLENBERG VIRUS ENVELOPE GLYCOPROTEIN GC FUSION DOMAINS IN TITLE 2 POSTFUSION CONFORMATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENVELOPMENT POLYPROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: M POLYPROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOVINE SCHMALLENBERG VIRUS BH80/GERMANY/2011; SOURCE 3 ORGANISM_TAXID: 1318464; SOURCE 4 GENE: GP; SOURCE 5 EXPRESSION_SYSTEM: DROSOPHILA MELANOGASTER; SOURCE 6 EXPRESSION_SYSTEM_COMMON: FRUIT FLY; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7227; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: SCHNEIDER 2; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMT KEYWDS VIRUS ENTRY, CLASS II MEMBRANE FUSION PROTEIN, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.HELLERT,P.GUARDADO-CALVO,F.A.REY REVDAT 2 15-MAR-23 7A56 1 JRNL REVDAT 1 01-SEP-21 7A56 0 JRNL AUTH J.HELLERT,A.AEBISCHER,A.HAOUZ,P.GUARDADO-CALVO,S.REICHE, JRNL AUTH 2 M.BEER,F.A.REY JRNL TITL STRUCTURE, FUNCTION, AND EVOLUTION OF THE ORTHOBUNYAVIRUS JRNL TITL 2 MEMBRANE FUSION GLYCOPROTEIN. JRNL REF CELL REP V. 42 12142 2023 JRNL REFN ESSN 2211-1247 JRNL PMID 36827185 JRNL DOI 10.1016/J.CELREP.2023.112142 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.41 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 44579 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.480 REMARK 3 FREE R VALUE TEST SET COUNT : 1998 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.4069 - 4.4572 0.98 3226 151 0.1527 0.1858 REMARK 3 2 4.4572 - 3.5383 1.00 3132 147 0.1403 0.1564 REMARK 3 3 3.5383 - 3.0912 0.99 3069 144 0.1573 0.2169 REMARK 3 4 3.0912 - 2.8086 1.00 3065 145 0.1735 0.2242 REMARK 3 5 2.8086 - 2.6073 0.99 3058 142 0.1795 0.2127 REMARK 3 6 2.6073 - 2.4536 0.99 3035 143 0.1844 0.2407 REMARK 3 7 2.4536 - 2.3307 0.99 3034 141 0.1845 0.2326 REMARK 3 8 2.3307 - 2.2293 0.99 3005 141 0.1783 0.2090 REMARK 3 9 2.2293 - 2.1435 0.99 3030 143 0.1832 0.2284 REMARK 3 10 2.1435 - 2.0695 0.99 2994 141 0.1937 0.2502 REMARK 3 11 2.0695 - 2.0048 0.99 2997 141 0.1965 0.2678 REMARK 3 12 2.0048 - 1.9475 0.99 3003 141 0.2183 0.2380 REMARK 3 13 1.9475 - 1.8962 0.99 2977 140 0.2518 0.2485 REMARK 3 14 1.8962 - 1.8500 0.99 2956 138 0.2782 0.3222 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.800 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.67 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.016 3310 REMARK 3 ANGLE : 1.362 4494 REMARK 3 CHIRALITY : 0.086 511 REMARK 3 PLANARITY : 0.008 570 REMARK 3 DIHEDRAL : 16.194 2032 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND ((RESSEQ 885:1220)) REMARK 3 ORIGIN FOR THE GROUP (A): 32.2094 -16.5420 126.6613 REMARK 3 T TENSOR REMARK 3 T11: 0.1882 T22: 0.2243 REMARK 3 T33: 0.1919 T12: 0.0688 REMARK 3 T13: 0.0059 T23: 0.0131 REMARK 3 L TENSOR REMARK 3 L11: 0.2187 L22: 0.1253 REMARK 3 L33: 3.4526 L12: -0.0007 REMARK 3 L13: -0.2816 L23: 0.2358 REMARK 3 S TENSOR REMARK 3 S11: 0.0482 S12: 0.0150 S13: 0.0258 REMARK 3 S21: -0.0178 S22: 0.0172 S23: 0.0171 REMARK 3 S31: -0.4028 S32: -0.3590 S33: -0.0714 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND ((RESSEQ 1221:1306)) REMARK 3 ORIGIN FOR THE GROUP (A): 18.8524 -34.5620 132.3330 REMARK 3 T TENSOR REMARK 3 T11: 0.3100 T22: 0.5854 REMARK 3 T33: 0.3538 T12: -0.1184 REMARK 3 T13: -0.0602 T23: -0.0692 REMARK 3 L TENSOR REMARK 3 L11: 2.5327 L22: 3.3341 REMARK 3 L33: 2.3994 L12: 0.3370 REMARK 3 L13: 1.4902 L23: 0.4315 REMARK 3 S TENSOR REMARK 3 S11: -0.0486 S12: 0.7230 S13: -0.4274 REMARK 3 S21: -0.4759 S22: -0.0932 S23: 0.4519 REMARK 3 S31: 0.2965 S32: -0.7636 S33: 0.1170 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7A56 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-AUG-20. REMARK 100 THE DEPOSITION ID IS D_1292110678. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-AUG-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8729 REMARK 200 MONOCHROMATOR : SILICON (1 1 1) CHANNEL-CUT REMARK 200 OPTICS : SILICON TOROIDAL MIRROR COATED REMARK 200 WITH RHODIUM REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 X 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44636 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 43.407 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 6.232 REMARK 200 R MERGE (I) : 0.10500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 1.09400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.5 UL OF 4.5 MG/ML TRIMERIC SBV GC REMARK 280 FUSION DOMAIN FRAGMENT IN 20 MM TRIS-CL PH 8.0, 150 MM NACL WERE REMARK 280 ADDED TO 0.5 UL OF RESERVOIR SOLUTION CONTAINING 20% W/V PEG 1K, REMARK 280 0.1 M NA/K PHOSPHATE PH 6.2 AND 0.2 M NACL, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 43.39500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 25.05411 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 119.36333 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 43.39500 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 25.05411 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 119.36333 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 43.39500 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 25.05411 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 119.36333 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 43.39500 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 25.05411 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 119.36333 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 43.39500 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 25.05411 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 119.36333 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 43.39500 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 25.05411 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 119.36333 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 50.10823 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 238.72667 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 50.10823 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 238.72667 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 50.10823 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 238.72667 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 50.10823 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 238.72667 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 50.10823 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 238.72667 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 50.10823 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 238.72667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 17730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 52330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -281.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 43.39500 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -75.16234 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 86.79000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CL CL A1406 LIES ON A SPECIAL POSITION. REMARK 375 P PO4 A1407 LIES ON A SPECIAL POSITION. REMARK 375 O1 PO4 A1407 LIES ON A SPECIAL POSITION. REMARK 375 P PO4 A1408 LIES ON A SPECIAL POSITION. REMARK 375 O1 PO4 A1408 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1790 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1821 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1912 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1919 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 870 REMARK 465 TRP A 871 REMARK 465 SER A 872 REMARK 465 HIS A 873 REMARK 465 PRO A 874 REMARK 465 GLN A 875 REMARK 465 PHE A 876 REMARK 465 GLU A 877 REMARK 465 LYS A 878 REMARK 465 GLY A 879 REMARK 465 GLY A 880 REMARK 465 LYS A 881 REMARK 465 LEU A 882 REMARK 465 THR A 883 REMARK 465 PRO A 884 REMARK 465 THR A 1190 REMARK 465 SER A 1191 REMARK 465 HIS A 1192 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1839 O HOH A 1903 2.00 REMARK 500 O HOH A 1694 O HOH A 1787 2.04 REMARK 500 O HOH A 1874 O HOH A 1893 2.09 REMARK 500 O HOH A 1735 O HOH A 1863 2.09 REMARK 500 O HOH A 1691 O HOH A 1857 2.17 REMARK 500 NE ARG A 976 O HOH A 1501 2.18 REMARK 500 OD1 ASN A 1159 O HOH A 1502 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1866 O HOH A 1866 12555 1.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A1106 CB SER A1106 OG 0.089 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A1041 CB - CG - OD1 ANGL. DEV. = 6.7 DEGREES REMARK 500 ASP A1122 CB - CG - OD1 ANGL. DEV. = -5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 891 174.91 -58.48 REMARK 500 ASN A 937 -107.32 54.22 REMARK 500 SER A 946 -165.92 -161.37 REMARK 500 CYS A1031 55.07 -153.74 REMARK 500 GLU A1055 -34.60 -133.09 REMARK 500 HIS A1077 22.06 45.75 REMARK 500 ASP A1122 75.76 -61.49 REMARK 500 PHE A1158 52.48 -148.85 REMARK 500 CYS A1168 -82.59 -104.94 REMARK 500 SER A1200 -117.12 -88.97 REMARK 500 CYS A1296 -129.11 52.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1919 DISTANCE = 6.81 ANGSTROMS DBREF 7A56 A 881 1306 UNP H2AM12 GP_SBVBH 881 1306 SEQADV 7A56 GLU A 870 UNP H2AM12 EXPRESSION TAG SEQADV 7A56 TRP A 871 UNP H2AM12 EXPRESSION TAG SEQADV 7A56 SER A 872 UNP H2AM12 EXPRESSION TAG SEQADV 7A56 HIS A 873 UNP H2AM12 EXPRESSION TAG SEQADV 7A56 PRO A 874 UNP H2AM12 EXPRESSION TAG SEQADV 7A56 GLN A 875 UNP H2AM12 EXPRESSION TAG SEQADV 7A56 PHE A 876 UNP H2AM12 EXPRESSION TAG SEQADV 7A56 GLU A 877 UNP H2AM12 EXPRESSION TAG SEQADV 7A56 LYS A 878 UNP H2AM12 EXPRESSION TAG SEQADV 7A56 GLY A 879 UNP H2AM12 EXPRESSION TAG SEQADV 7A56 GLY A 880 UNP H2AM12 EXPRESSION TAG SEQRES 1 A 437 GLU TRP SER HIS PRO GLN PHE GLU LYS GLY GLY LYS LEU SEQRES 2 A 437 THR PRO LYS SER ILE ASN HIS PRO ASP ILE GLU ASN TYR SEQRES 3 A 437 ILE ALA ALA LEU GLN SER ASP ILE ALA ASN ASP LEU THR SEQRES 4 A 437 MET HIS TYR PHE LYS PRO LEU LYS ASN LEU PRO ALA ILE SEQRES 5 A 437 ILE PRO GLN TYR LYS THR MET THR LEU ASN GLY ASP LYS SEQRES 6 A 437 VAL SER ASN GLY ILE ARG ASN SER TYR ILE GLU SER HIS SEQRES 7 A 437 ILE PRO ALA ILE ASN GLY LEU SER ALA GLY ILE ASN ILE SEQRES 8 A 437 ALA MET PRO ASN GLY GLU SER LEU PHE SER ILE ILE ILE SEQRES 9 A 437 TYR VAL ARG ARG VAL ILE ASN LYS ALA SER TYR ARG PHE SEQRES 10 A 437 LEU TYR GLU THR GLY PRO THR ILE GLY ILE ASN ALA LYS SEQRES 11 A 437 HIS GLU GLU VAL CYS THR GLY LYS CYS PRO SER PRO ILE SEQRES 12 A 437 PRO HIS GLN ASP GLY TRP VAL THR PHE SER LYS GLU ARG SEQRES 13 A 437 SER SER ASN TRP GLY CYS GLU GLU TRP GLY CYS LEU ALA SEQRES 14 A 437 ILE ASN ASP GLY CYS LEU TYR GLY SER CYS GLN ASP ILE SEQRES 15 A 437 ILE ARG PRO GLU TYR LYS ILE TYR LYS LYS SER SER ILE SEQRES 16 A 437 GLU GLN LYS ASP VAL GLU VAL CYS ILE THR MET ALA HIS SEQRES 17 A 437 GLU SER PHE CYS SER THR VAL ASP VAL LEU GLN PRO LEU SEQRES 18 A 437 ILE SER ASP ARG ILE GLN LEU ASP ILE GLN THR ILE GLN SEQRES 19 A 437 MET ASP SER MET PRO ASN ILE ILE ALA VAL LYS ASN GLY SEQRES 20 A 437 LYS VAL TYR VAL GLY ASP ILE ASN ASP LEU GLY SER THR SEQRES 21 A 437 ALA LYS LYS CYS GLY SER VAL GLN LEU TYR SER GLU GLY SEQRES 22 A 437 ILE ILE GLY SER GLY THR PRO LYS PHE ASP TYR VAL CYS SEQRES 23 A 437 HIS ALA PHE ASN ARG LYS ASP VAL ILE LEU ARG ARG CYS SEQRES 24 A 437 PHE ASP ASN SER TYR GLN SER CYS LEU LEU LEU GLU GLN SEQRES 25 A 437 ASP ASN THR LEU THR ILE ALA SER THR SER HIS MET GLU SEQRES 26 A 437 VAL HIS LYS LYS VAL SER SER VAL GLY THR ILE ASN TYR SEQRES 27 A 437 LYS ILE MET LEU GLY ASP PHE ASP TYR ASN ALA TYR SER SEQRES 28 A 437 THR GLN ALA THR VAL THR ILE ASP GLU ILE ARG CYS GLY SEQRES 29 A 437 GLY CYS TYR GLY CYS PRO GLU GLY MET ALA CYS ALA LEU SEQRES 30 A 437 LYS LEU SER THR ASN THR ILE GLY SER CYS SER ILE LYS SEQRES 31 A 437 SER ASN CYS ASP THR TYR ILE LYS ILE ILE ALA VAL ASP SEQRES 32 A 437 PRO MET GLN SER GLU TYR SER ILE LYS LEU ASN CYS PRO SEQRES 33 A 437 LEU ALA THR GLU THR VAL SER VAL SER VAL CYS SER ALA SEQRES 34 A 437 SER ALA TYR THR LYS PRO SER ILE HET CL A1401 1 HET CL A1402 1 HET CL A1403 1 HET CL A1404 1 HET CL A1405 1 HET CL A1406 1 HET PO4 A1407 5 HET PO4 A1408 5 HET PO4 A1409 5 HET NA A1410 1 HET NA A1411 1 HET NA A1412 1 HET NA A1413 1 HET K A1414 1 HETNAM CL CHLORIDE ION HETNAM PO4 PHOSPHATE ION HETNAM NA SODIUM ION HETNAM K POTASSIUM ION FORMUL 2 CL 6(CL 1-) FORMUL 8 PO4 3(O4 P 3-) FORMUL 11 NA 4(NA 1+) FORMUL 15 K K 1+ FORMUL 16 HOH *419(H2 O) HELIX 1 AA1 ASP A 891 HIS A 910 1 20 HELIX 2 AA2 TYR A 1173 LEU A 1178 1 6 SHEET 1 AA1 6 LYS A 913 LEU A 915 0 SHEET 2 AA1 6 GLU A1078 THR A1083 -1 O CYS A1081 N LYS A 913 SHEET 3 AA1 6 GLN A1066 MET A1075 -1 N MET A1075 O GLU A1078 SHEET 4 AA1 6 SER A 967 THR A 990 -1 N ILE A 972 O THR A1074 SHEET 5 AA1 6 GLU A1194 LYS A1197 -1 O VAL A1195 N ALA A 982 SHEET 6 AA1 6 LEU A1185 ILE A1187 -1 N THR A1186 O HIS A1196 SHEET 1 AA2 7 GLU A1180 GLN A1181 0 SHEET 2 AA2 7 LYS A1117 VAL A1120 -1 N VAL A1120 O GLU A1180 SHEET 3 AA2 7 ILE A1110 LYS A1114 -1 N ALA A1112 O TYR A1119 SHEET 4 AA2 7 TYR A1056 LYS A1061 -1 N LYS A1057 O VAL A1113 SHEET 5 AA2 7 SER A 967 THR A 990 -1 N LEU A 987 O ILE A1058 SHEET 6 AA2 7 SER A 955 ALA A 961 -1 N ILE A 960 O LEU A 968 SHEET 7 AA2 7 ASP A1215 TYR A1219 -1 O ASN A1217 N ASN A 959 SHEET 1 AA3 5 LEU A 930 SER A 936 0 SHEET 2 AA3 5 ILE A 939 PRO A 949 -1 O TYR A 943 N GLY A 932 SHEET 3 AA3 5 THR A1204 GLY A1212 -1 O ILE A1205 N ILE A 948 SHEET 4 AA3 5 ILE A1095 GLN A1100 -1 N GLN A1100 O THR A1204 SHEET 5 AA3 5 LEU A1090 ILE A1091 -1 N LEU A1090 O LEU A1097 SHEET 1 AA4 3 THR A 993 VAL A1003 0 SHEET 2 AA4 3 ASP A1041 ILE A1052 -1 O ILE A1051 N ILE A 994 SHEET 3 AA4 3 VAL A1019 SER A1027 -1 N SER A1027 O ASP A1041 SHEET 1 AA5 2 GLN A1137 TYR A1139 0 SHEET 2 AA5 2 GLY A1142 ILE A1144 -1 O GLY A1142 N TYR A1139 SHEET 1 AA6 2 LYS A1150 VAL A1154 0 SHEET 2 AA6 2 ASP A1162 ARG A1167 -1 O ILE A1164 N ASP A1152 SHEET 1 AA7 4 VAL A1225 GLY A1234 0 SHEET 2 AA7 4 MET A1242 THR A1250 -1 O ALA A1245 N ARG A1231 SHEET 3 AA7 4 GLU A1277 ASN A1283 -1 O TYR A1278 N LEU A1246 SHEET 4 AA7 4 ASP A1263 THR A1264 -1 N ASP A1263 O ASN A1283 SHEET 1 AA8 4 ILE A1268 VAL A1271 0 SHEET 2 AA8 4 GLY A1254 SER A1260 -1 N CYS A1256 O ILE A1269 SHEET 3 AA8 4 VAL A1291 VAL A1295 -1 O SER A1294 N LYS A1259 SHEET 4 AA8 4 ALA A1298 THR A1302 -1 O THR A1302 N VAL A1291 SSBOND 1 CYS A 1004 CYS A 1036 1555 1555 2.06 SSBOND 2 CYS A 1008 CYS A 1043 1555 1555 2.05 SSBOND 3 CYS A 1031 CYS A 1155 1555 1555 2.06 SSBOND 4 CYS A 1048 CYS A 1168 1555 1555 2.13 SSBOND 5 CYS A 1072 CYS A 1081 1555 1555 2.03 SSBOND 6 CYS A 1133 CYS A 1176 1555 1555 2.07 SSBOND 7 CYS A 1232 CYS A 1244 1555 1555 2.07 SSBOND 8 CYS A 1235 CYS A 1238 1555 1555 2.03 SSBOND 9 CYS A 1256 CYS A 1296 1555 1555 2.05 SSBOND 10 CYS A 1262 CYS A 1284 1555 1555 2.04 LINK NA NA A1410 O HOH A1917 1555 1555 2.49 CISPEP 1 SER A 1010 PRO A 1011 0 -4.83 CRYST1 86.790 86.790 358.090 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011522 0.006652 0.000000 0.00000 SCALE2 0.000000 0.013305 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002793 0.00000