HEADER TRANSFERASE 21-AUG-20 7A5N TITLE STRUCTURE OF DYRK1A IN COMPLEX WITH COMPOUND 34 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DUAL SPECIFICITY TYROSINE-PHOSPHORYLATION-REGULATED KINASE COMPND 3 1A; COMPND 4 CHAIN: A, B; COMPND 5 SYNONYM: DUAL SPECIFICITY YAK1-RELATED KINASE,HP86,PROTEIN KINASE COMPND 6 MINIBRAIN HOMOLOG,HMNB; COMPND 7 EC: 2.7.12.1; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DYRK1A, DYRK, MNB, MNBH; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: PLYSS KEYWDS SERINE/THREONINE-PROTEIN KINASE, PHOSPHOPROTEIN, KINASE, SBDD, FBLD, KEYWDS 2 SMALL MOLECULE INHIBITOR, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR P.DOKURNO,A.E.SURGENOR,R.E.HUBBARD REVDAT 3 31-JAN-24 7A5N 1 REMARK REVDAT 2 21-JUL-21 7A5N 1 JRNL REVDAT 1 30-JUN-21 7A5N 0 JRNL AUTH D.LEE WALMSLEY,J.B.MURRAY,P.DOKURNO,A.J.MASSEY,K.BENWELL, JRNL AUTH 2 A.FIUMANA,N.FOLOPPE,S.RAY,J.SMITH,A.E.SURGENOR,T.EDMONDS, JRNL AUTH 3 D.DEMARLES,M.BURBRIDGE,F.CRUZALEGUI,A.KOTSCHY,R.E.HUBBARD JRNL TITL FRAGMENT-DERIVED SELECTIVE INHIBITORS OF DUAL-SPECIFICITY JRNL TITL 2 KINASES DYRK1A AND DYRK1B. JRNL REF J.MED.CHEM. V. 64 8971 2021 JRNL REFN ISSN 0022-2623 JRNL PMID 34143631 JRNL DOI 10.1021/ACS.JMEDCHEM.1C00024 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 63.4 REMARK 3 NUMBER OF REFLECTIONS : 21041 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.219 REMARK 3 FREE R VALUE : 0.285 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1058 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.42 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1429 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 29.81 REMARK 3 BIN R VALUE (WORKING SET) : 0.3030 REMARK 3 BIN FREE R VALUE SET COUNT : 66 REMARK 3 BIN FREE R VALUE : 0.3630 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5350 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 57 REMARK 3 SOLVENT ATOMS : 63 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.16000 REMARK 3 B22 (A**2) : -0.49000 REMARK 3 B33 (A**2) : 0.39000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.20000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.396 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.247 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.467 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.930 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.882 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5534 ; 0.007 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 5152 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7481 ; 1.513 ; 1.641 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11923 ; 1.215 ; 1.575 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 661 ; 5.654 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 280 ;34.109 ;21.964 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 970 ;21.156 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 34 ;22.494 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 688 ; 0.065 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6087 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1189 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7A5N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-AUG-20. REMARK 100 THE DEPOSITION ID IS D_1292110880. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-DEC-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22364 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.270 REMARK 200 RESOLUTION RANGE LOW (A) : 58.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 61.5 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : 0.11300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.27 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.69100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2VX3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES BUFFER AT PH 7.5, 20% REMARK 280 PEG4K, 0.2M MGCL2, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 42.68400 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 127 REMARK 465 GLY A 128 REMARK 465 SER A 129 REMARK 465 SER A 130 REMARK 465 HIS A 131 REMARK 465 HIS A 132 REMARK 465 HIS A 133 REMARK 465 HIS A 134 REMARK 465 HIS A 135 REMARK 465 HIS A 136 REMARK 465 SER A 137 REMARK 465 SER A 138 REMARK 465 GLY A 139 REMARK 465 LEU A 140 REMARK 465 VAL A 141 REMARK 465 PRO A 142 REMARK 465 GLY A 411 REMARK 465 LYS A 412 REMARK 465 ARG A 413 REMARK 465 THR A 482 REMARK 465 ALA A 483 REMARK 465 ASP A 484 REMARK 465 GLU A 485 REMARK 465 MET B 127 REMARK 465 GLY B 128 REMARK 465 SER B 129 REMARK 465 SER B 130 REMARK 465 HIS B 131 REMARK 465 HIS B 132 REMARK 465 HIS B 133 REMARK 465 HIS B 134 REMARK 465 HIS B 135 REMARK 465 HIS B 136 REMARK 465 SER B 137 REMARK 465 SER B 138 REMARK 465 GLY B 139 REMARK 465 LEU B 140 REMARK 465 VAL B 141 REMARK 465 PRO B 142 REMARK 465 ASP B 214 REMARK 465 THR B 215 REMARK 465 LYS B 407 REMARK 465 THR B 408 REMARK 465 LYS B 409 REMARK 465 ASP B 410 REMARK 465 GLY B 411 REMARK 465 LYS B 412 REMARK 465 ARG B 413 REMARK 465 THR B 482 REMARK 465 ALA B 483 REMARK 465 ASP B 484 REMARK 465 GLU B 485 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 146 CG ND1 CD2 CE1 NE2 REMARK 470 ILE A 148 CG1 CG2 CD1 REMARK 470 LYS A 150 CG CD CE NZ REMARK 470 ARG A 179 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 194 CG CD CE NZ REMARK 470 ARG A 392 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 407 CG CD CE NZ REMARK 470 LYS A 409 CG CD CE NZ REMARK 470 ASP A 410 CG OD1 OD2 REMARK 470 GLU A 414 CG CD OE1 OE2 REMARK 470 LYS A 480 CD CE NZ REMARK 470 LYS A 481 CG CD CE NZ REMARK 470 ILE B 148 CG1 CG2 CD1 REMARK 470 LYS B 150 CG CD CE NZ REMARK 470 GLU B 153 CG CD OE1 OE2 REMARK 470 LYS B 218 CG CD CE NZ REMARK 470 ARG B 255 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 280 CG CD OE1 OE2 REMARK 470 LYS B 299 CG CD CE NZ REMARK 470 ARG B 300 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 414 CG CD OE1 OE2 REMARK 470 LYS B 480 CD CE NZ REMARK 470 LYS B 481 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ARG A 392 NZ LYS A 406 1.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 147 -144.17 -103.38 REMARK 500 LYS A 150 -62.30 -129.35 REMARK 500 ASN A 151 131.90 86.64 REMARK 500 ARG A 158 -46.48 -148.15 REMARK 500 LEU A 241 -149.81 -115.74 REMARK 500 SER A 242 -156.52 -130.99 REMARK 500 LEU A 281 -72.00 -90.20 REMARK 500 ASP A 287 31.38 -155.26 REMARK 500 ASP A 307 82.27 72.71 REMARK 500 LEU A 314 -81.46 54.56 REMARK 500 GLN A 323 141.19 71.58 REMARK 500 ASP A 339 -157.38 -127.41 REMARK 500 SER A 362 73.36 -102.04 REMARK 500 LYS A 409 -72.82 73.83 REMARK 500 LEU A 460 31.02 -98.85 REMARK 500 ARG B 158 -42.26 -151.43 REMARK 500 GLN B 182 71.45 54.18 REMARK 500 SER B 242 -157.06 -95.65 REMARK 500 LEU B 281 -69.19 -90.96 REMARK 500 CYS B 286 -3.38 83.95 REMARK 500 ASP B 287 56.45 -149.18 REMARK 500 ASP B 307 91.01 50.44 REMARK 500 GLN B 323 148.76 74.29 REMARK 500 ASP B 339 -157.99 -133.51 REMARK 500 ASP B 400 -9.69 -54.33 REMARK 500 PRO B 417 157.31 -47.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7A4O RELATED DB: PDB REMARK 900 RELATED ID: 7A4R RELATED DB: PDB REMARK 900 RELATED ID: 7A4S RELATED DB: PDB REMARK 900 RELATED ID: 7A4W RELATED DB: PDB REMARK 900 RELATED ID: 7A4Z RELATED DB: PDB REMARK 900 RELATED ID: 7A51 RELATED DB: PDB REMARK 900 RELATED ID: 7A52 RELATED DB: PDB REMARK 900 RELATED ID: 7A53 RELATED DB: PDB REMARK 900 RELATED ID: 7A55 RELATED DB: PDB REMARK 900 RELATED ID: 7A5B RELATED DB: PDB REMARK 900 RELATED ID: 7A5D RELATED DB: PDB REMARK 900 RELATED ID: 7A8L RELATED DB: PDB DBREF 7A5N A 148 485 UNP Q13627 DYR1A_HUMAN 148 485 DBREF 7A5N B 148 485 UNP Q13627 DYR1A_HUMAN 148 485 SEQADV 7A5N MET A 127 UNP Q13627 INITIATING METHIONINE SEQADV 7A5N GLY A 128 UNP Q13627 EXPRESSION TAG SEQADV 7A5N SER A 129 UNP Q13627 EXPRESSION TAG SEQADV 7A5N SER A 130 UNP Q13627 EXPRESSION TAG SEQADV 7A5N HIS A 131 UNP Q13627 EXPRESSION TAG SEQADV 7A5N HIS A 132 UNP Q13627 EXPRESSION TAG SEQADV 7A5N HIS A 133 UNP Q13627 EXPRESSION TAG SEQADV 7A5N HIS A 134 UNP Q13627 EXPRESSION TAG SEQADV 7A5N HIS A 135 UNP Q13627 EXPRESSION TAG SEQADV 7A5N HIS A 136 UNP Q13627 EXPRESSION TAG SEQADV 7A5N SER A 137 UNP Q13627 EXPRESSION TAG SEQADV 7A5N SER A 138 UNP Q13627 EXPRESSION TAG SEQADV 7A5N GLY A 139 UNP Q13627 EXPRESSION TAG SEQADV 7A5N LEU A 140 UNP Q13627 EXPRESSION TAG SEQADV 7A5N VAL A 141 UNP Q13627 EXPRESSION TAG SEQADV 7A5N PRO A 142 UNP Q13627 EXPRESSION TAG SEQADV 7A5N ARG A 143 UNP Q13627 EXPRESSION TAG SEQADV 7A5N GLY A 144 UNP Q13627 EXPRESSION TAG SEQADV 7A5N SEP A 145 UNP Q13627 EXPRESSION TAG SEQADV 7A5N HIS A 146 UNP Q13627 EXPRESSION TAG SEQADV 7A5N MET A 147 UNP Q13627 EXPRESSION TAG SEQADV 7A5N MET B 127 UNP Q13627 INITIATING METHIONINE SEQADV 7A5N GLY B 128 UNP Q13627 EXPRESSION TAG SEQADV 7A5N SER B 129 UNP Q13627 EXPRESSION TAG SEQADV 7A5N SER B 130 UNP Q13627 EXPRESSION TAG SEQADV 7A5N HIS B 131 UNP Q13627 EXPRESSION TAG SEQADV 7A5N HIS B 132 UNP Q13627 EXPRESSION TAG SEQADV 7A5N HIS B 133 UNP Q13627 EXPRESSION TAG SEQADV 7A5N HIS B 134 UNP Q13627 EXPRESSION TAG SEQADV 7A5N HIS B 135 UNP Q13627 EXPRESSION TAG SEQADV 7A5N HIS B 136 UNP Q13627 EXPRESSION TAG SEQADV 7A5N SER B 137 UNP Q13627 EXPRESSION TAG SEQADV 7A5N SER B 138 UNP Q13627 EXPRESSION TAG SEQADV 7A5N GLY B 139 UNP Q13627 EXPRESSION TAG SEQADV 7A5N LEU B 140 UNP Q13627 EXPRESSION TAG SEQADV 7A5N VAL B 141 UNP Q13627 EXPRESSION TAG SEQADV 7A5N PRO B 142 UNP Q13627 EXPRESSION TAG SEQADV 7A5N ARG B 143 UNP Q13627 EXPRESSION TAG SEQADV 7A5N GLY B 144 UNP Q13627 EXPRESSION TAG SEQADV 7A5N SEP B 145 UNP Q13627 EXPRESSION TAG SEQADV 7A5N HIS B 146 UNP Q13627 EXPRESSION TAG SEQADV 7A5N MET B 147 UNP Q13627 EXPRESSION TAG SEQRES 1 A 359 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 359 LEU VAL PRO ARG GLY SEP HIS MET ILE VAL LYS ASN GLY SEQRES 3 A 359 GLU LYS TRP MET ASP ARG TYR GLU ILE ASP SER LEU ILE SEQRES 4 A 359 GLY LYS GLY SER PHE GLY GLN VAL VAL LYS ALA TYR ASP SEQRES 5 A 359 ARG VAL GLU GLN GLU TRP VAL ALA ILE LYS ILE ILE LYS SEQRES 6 A 359 ASN LYS LYS ALA PHE LEU ASN GLN ALA GLN ILE GLU VAL SEQRES 7 A 359 ARG LEU LEU GLU LEU MET ASN LYS HIS ASP THR GLU MET SEQRES 8 A 359 LYS TYR TYR ILE VAL HIS LEU LYS ARG HIS PHE MET PHE SEQRES 9 A 359 ARG ASN HIS LEU CYS LEU VAL PHE GLU MET LEU SER TYR SEQRES 10 A 359 ASN LEU TYR ASP LEU LEU ARG ASN THR ASN PHE ARG GLY SEQRES 11 A 359 VAL SER LEU ASN LEU THR ARG LYS PHE ALA GLN GLN MET SEQRES 12 A 359 CYS THR ALA LEU LEU PHE LEU ALA THR PRO GLU LEU SER SEQRES 13 A 359 ILE ILE HIS CYS ASP LEU LYS PRO GLU ASN ILE LEU LEU SEQRES 14 A 359 CYS ASN PRO LYS ARG SER ALA ILE LYS ILE VAL ASP PHE SEQRES 15 A 359 GLY SER SER CYS GLN LEU GLY GLN ARG ILE TYR GLN PTR SEQRES 16 A 359 ILE GLN SER ARG PHE TYR ARG SER PRO GLU VAL LEU LEU SEQRES 17 A 359 GLY MET PRO TYR ASP LEU ALA ILE ASP MET TRP SER LEU SEQRES 18 A 359 GLY CYS ILE LEU VAL GLU MET HIS THR GLY GLU PRO LEU SEQRES 19 A 359 PHE SER GLY ALA ASN GLU VAL ASP GLN MET ASN LYS ILE SEQRES 20 A 359 VAL GLU VAL LEU GLY ILE PRO PRO ALA HIS ILE LEU ASP SEQRES 21 A 359 GLN ALA PRO LYS ALA ARG LYS PHE PHE GLU LYS LEU PRO SEQRES 22 A 359 ASP GLY THR TRP ASN LEU LYS LYS THR LYS ASP GLY LYS SEQRES 23 A 359 ARG GLU TYR LYS PRO PRO GLY THR ARG LYS LEU HIS ASN SEQRES 24 A 359 ILE LEU GLY VAL GLU THR GLY GLY PRO GLY GLY ARG ARG SEQRES 25 A 359 ALA GLY GLU SER GLY HIS THR VAL ALA ASP TYR LEU LYS SEQRES 26 A 359 PHE LYS ASP LEU ILE LEU ARG MET LEU ASP TYR ASP PRO SEQRES 27 A 359 LYS THR ARG ILE GLN PRO TYR TYR ALA LEU GLN HIS SER SEQRES 28 A 359 PHE PHE LYS LYS THR ALA ASP GLU SEQRES 1 B 359 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 359 LEU VAL PRO ARG GLY SEP HIS MET ILE VAL LYS ASN GLY SEQRES 3 B 359 GLU LYS TRP MET ASP ARG TYR GLU ILE ASP SER LEU ILE SEQRES 4 B 359 GLY LYS GLY SER PHE GLY GLN VAL VAL LYS ALA TYR ASP SEQRES 5 B 359 ARG VAL GLU GLN GLU TRP VAL ALA ILE LYS ILE ILE LYS SEQRES 6 B 359 ASN LYS LYS ALA PHE LEU ASN GLN ALA GLN ILE GLU VAL SEQRES 7 B 359 ARG LEU LEU GLU LEU MET ASN LYS HIS ASP THR GLU MET SEQRES 8 B 359 LYS TYR TYR ILE VAL HIS LEU LYS ARG HIS PHE MET PHE SEQRES 9 B 359 ARG ASN HIS LEU CYS LEU VAL PHE GLU MET LEU SER TYR SEQRES 10 B 359 ASN LEU TYR ASP LEU LEU ARG ASN THR ASN PHE ARG GLY SEQRES 11 B 359 VAL SER LEU ASN LEU THR ARG LYS PHE ALA GLN GLN MET SEQRES 12 B 359 CYS THR ALA LEU LEU PHE LEU ALA THR PRO GLU LEU SER SEQRES 13 B 359 ILE ILE HIS CYS ASP LEU LYS PRO GLU ASN ILE LEU LEU SEQRES 14 B 359 CYS ASN PRO LYS ARG SER ALA ILE LYS ILE VAL ASP PHE SEQRES 15 B 359 GLY SER SER CYS GLN LEU GLY GLN ARG ILE TYR GLN PTR SEQRES 16 B 359 ILE GLN SER ARG PHE TYR ARG SER PRO GLU VAL LEU LEU SEQRES 17 B 359 GLY MET PRO TYR ASP LEU ALA ILE ASP MET TRP SER LEU SEQRES 18 B 359 GLY CYS ILE LEU VAL GLU MET HIS THR GLY GLU PRO LEU SEQRES 19 B 359 PHE SER GLY ALA ASN GLU VAL ASP GLN MET ASN LYS ILE SEQRES 20 B 359 VAL GLU VAL LEU GLY ILE PRO PRO ALA HIS ILE LEU ASP SEQRES 21 B 359 GLN ALA PRO LYS ALA ARG LYS PHE PHE GLU LYS LEU PRO SEQRES 22 B 359 ASP GLY THR TRP ASN LEU LYS LYS THR LYS ASP GLY LYS SEQRES 23 B 359 ARG GLU TYR LYS PRO PRO GLY THR ARG LYS LEU HIS ASN SEQRES 24 B 359 ILE LEU GLY VAL GLU THR GLY GLY PRO GLY GLY ARG ARG SEQRES 25 B 359 ALA GLY GLU SER GLY HIS THR VAL ALA ASP TYR LEU LYS SEQRES 26 B 359 PHE LYS ASP LEU ILE LEU ARG MET LEU ASP TYR ASP PRO SEQRES 27 B 359 LYS THR ARG ILE GLN PRO TYR TYR ALA LEU GLN HIS SER SEQRES 28 B 359 PHE PHE LYS LYS THR ALA ASP GLU MODRES 7A5N PTR A 321 TYR MODIFIED RESIDUE MODRES 7A5N PTR B 321 TYR MODIFIED RESIDUE HET SEP A 145 10 HET PTR A 321 16 HET SEP B 145 10 HET PTR B 321 16 HET R05 A 501 27 HET CL A 502 1 HET R05 B 501 27 HET CL B 502 1 HET CL B 503 1 HETNAM SEP PHOSPHOSERINE HETNAM PTR O-PHOSPHOTYROSINE HETNAM R05 5-(2-AZANYLPYRIDIN-4-YL)-~{N}-[[2,6-BIS(FLUORANYL) HETNAM 2 R05 PHENYL]METHYL]-2-METHYL-7~{H}-PYRROLO[2,3-D]PYRIMIDIN- HETNAM 3 R05 4-AMINE HETNAM CL CHLORIDE ION HETSYN SEP PHOSPHONOSERINE HETSYN PTR PHOSPHONOTYROSINE FORMUL 1 SEP 2(C3 H8 N O6 P) FORMUL 1 PTR 2(C9 H12 N O6 P) FORMUL 3 R05 2(C19 H16 F2 N6) FORMUL 4 CL 3(CL 1-) FORMUL 8 HOH *63(H2 O) HELIX 1 AA1 LYS A 193 HIS A 213 1 21 HELIX 2 AA2 THR A 215 ILE A 221 5 7 HELIX 3 AA3 ASN A 244 THR A 252 1 9 HELIX 4 AA4 SER A 258 ALA A 277 1 20 HELIX 5 AA5 LYS A 289 GLU A 291 5 3 HELIX 6 AA6 SER A 324 ARG A 328 5 5 HELIX 7 AA7 SER A 329 LEU A 334 1 6 HELIX 8 AA8 LEU A 340 GLY A 357 1 18 HELIX 9 AA9 ASN A 365 GLY A 378 1 14 HELIX 10 AB1 PRO A 381 ASP A 386 1 6 HELIX 11 AB2 LYS A 390 LYS A 393 5 4 HELIX 12 AB3 LYS A 422 LEU A 427 1 6 HELIX 13 AB4 GLY A 433 ARG A 437 5 5 HELIX 14 AB5 THR A 445 LEU A 460 1 16 HELIX 15 AB6 GLN A 469 LEU A 474 1 6 HELIX 16 AB7 GLN A 475 LYS A 480 5 6 HELIX 17 AB8 LYS B 193 HIS B 213 1 21 HELIX 18 AB9 GLU B 216 ILE B 221 5 6 HELIX 19 AC1 ASN B 244 THR B 252 1 9 HELIX 20 AC2 SER B 258 ALA B 277 1 20 HELIX 21 AC3 LYS B 289 GLU B 291 5 3 HELIX 22 AC4 SER B 324 ARG B 328 5 5 HELIX 23 AC5 SER B 329 LEU B 334 1 6 HELIX 24 AC6 LEU B 340 GLY B 357 1 18 HELIX 25 AC7 ASN B 365 GLY B 378 1 14 HELIX 26 AC8 PRO B 381 ASP B 386 1 6 HELIX 27 AC9 LYS B 390 LYS B 393 5 4 HELIX 28 AD1 LYS B 422 LEU B 427 1 6 HELIX 29 AD2 GLY B 433 ARG B 437 5 5 HELIX 30 AD3 THR B 445 LEU B 460 1 16 HELIX 31 AD4 GLN B 469 LEU B 474 1 6 HELIX 32 AD5 GLN B 475 LYS B 480 5 6 SHEET 1 AA1 6 LYS A 154 TRP A 155 0 SHEET 2 AA1 6 TYR A 159 GLY A 168 -1 O TYR A 159 N TRP A 155 SHEET 3 AA1 6 GLY A 171 ASP A 178 -1 O GLY A 171 N GLY A 168 SHEET 4 AA1 6 GLU A 183 ILE A 190 -1 O GLU A 183 N ASP A 178 SHEET 5 AA1 6 HIS A 233 GLU A 239 -1 O LEU A 236 N LYS A 188 SHEET 6 AA1 6 LEU A 224 PHE A 230 -1 N ARG A 226 O VAL A 237 SHEET 1 AA2 2 ILE A 283 ILE A 284 0 SHEET 2 AA2 2 CYS A 312 GLN A 313 -1 O CYS A 312 N ILE A 284 SHEET 1 AA3 2 ILE A 293 LEU A 295 0 SHEET 2 AA3 2 ILE A 303 ILE A 305 -1 O LYS A 304 N LEU A 294 SHEET 1 AA4 2 PHE A 395 LYS A 397 0 SHEET 2 AA4 2 TRP A 403 LEU A 405 -1 O ASN A 404 N GLU A 396 SHEET 1 AA5 6 LYS B 154 TRP B 155 0 SHEET 2 AA5 6 TYR B 159 LYS B 167 -1 O TYR B 159 N TRP B 155 SHEET 3 AA5 6 GLY B 171 ASP B 178 -1 O TYR B 177 N GLU B 160 SHEET 4 AA5 6 GLU B 183 ILE B 190 -1 O ILE B 189 N GLN B 172 SHEET 5 AA5 6 HIS B 233 GLU B 239 -1 O PHE B 238 N ALA B 186 SHEET 6 AA5 6 LEU B 224 PHE B 230 -1 N PHE B 228 O CYS B 235 SHEET 1 AA6 2 ILE B 283 ILE B 284 0 SHEET 2 AA6 2 CYS B 312 GLN B 313 -1 O CYS B 312 N ILE B 284 SHEET 1 AA7 2 ILE B 293 LEU B 295 0 SHEET 2 AA7 2 ILE B 303 ILE B 305 -1 O LYS B 304 N LEU B 294 SHEET 1 AA8 2 PHE B 395 LEU B 398 0 SHEET 2 AA8 2 THR B 402 LEU B 405 -1 O ASN B 404 N GLU B 396 LINK C GLY A 144 N SEP A 145 1555 1555 1.34 LINK C SEP A 145 N HIS A 146 1555 1555 1.35 LINK C GLN A 320 N PTR A 321 1555 1555 1.33 LINK C PTR A 321 N ILE A 322 1555 1555 1.34 LINK C GLY B 144 N SEP B 145 1555 1555 1.34 LINK C SEP B 145 N HIS B 146 1555 1555 1.34 LINK C GLN B 320 N PTR B 321 1555 1555 1.34 LINK C PTR B 321 N ILE B 322 1555 1555 1.35 CRYST1 57.361 85.368 84.804 90.00 107.06 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017433 0.000000 0.005351 0.00000 SCALE2 0.000000 0.011714 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012335 0.00000