HEADER ANTIMICROBIAL PROTEIN 24-AUG-20 7A5Z TITLE STRUCTURE OF VIM-2 METALLO-BETA-LACTAMASE WITH HYDROLYSED FAROPENEM TITLE 2 IMINE PRODUCT COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE VIM-2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CLASS B BETA-LACTAMASE,CLASS B CARBAPENEMASE VIM-2,METALLO COMPND 5 BETA LACTAMASE VIM-2,METALLO BETA-LACTAMASE,METALLO-BETA-LACTAMASE COMPND 6 VIM-2,METALLO-BETA-LACTAMASE VIM-2,METTALO-BETA-LACTAMASE VIM-2,VIM-2 COMPND 7 METALLO-BETA-LACTAMASE,VIM-2 PROTEIN; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: BLAVIM-2, BLA VIM-2, BLA-VIM-2, BLASVIM-2, BLAVIM2, BLM, VIM- SOURCE 5 2, VIM-2, PAERUG_P32_LONDON_17_VIM_2_10_11_06255; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: LEMO21; SOURCE 9 EXPRESSION_SYSTEM_VARIANT: DE3; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: POPINF KEYWDS METALLO-BETA-LACTAMASE, VIM-2, FAROPENEM, ANTIMICROBIAL RESISTANCE, KEYWDS 2 PENEMS, CARBAPENEMS, ANTIMICROBIAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.LUCIC,C.J.SCHOFIELD REVDAT 3 31-JAN-24 7A5Z 1 REMARK REVDAT 2 03-MAR-21 7A5Z 1 JRNL REVDAT 1 24-FEB-21 7A5Z 0 JRNL AUTH A.LUCIC,P.HINCHLIFFE,T.R.MALLA,C.L.TOOKE,J.BREM,K.CALVOPINA, JRNL AUTH 2 C.T.LOHANS,P.RABE,M.A.MCDONOUGH,T.ARMISTEAD,A.M.ORVILLE, JRNL AUTH 3 J.SPENCER,C.J.SCHOFIELD JRNL TITL FAROPENEM REACTS WITH SERINE AND METALLO-BETA-LACTAMASES TO JRNL TITL 2 GIVE MULTIPLE PRODUCTS. JRNL REF EUR.J.MED.CHEM. V. 215 13257 2021 JRNL REFN ISSN 0223-5234 JRNL PMID 33618159 JRNL DOI 10.1016/J.EJMECH.2021.113257 REMARK 2 REMARK 2 RESOLUTION. 1.29 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.29 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.88 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 48219 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.141 REMARK 3 R VALUE (WORKING SET) : 0.140 REMARK 3 FREE R VALUE : 0.158 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2411 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.8800 - 3.3200 1.00 2862 155 0.1369 0.1497 REMARK 3 2 3.3200 - 2.6300 1.00 2723 164 0.1275 0.1449 REMARK 3 3 2.6300 - 2.3000 1.00 2759 132 0.1139 0.1489 REMARK 3 4 2.3000 - 2.0900 1.00 2712 134 0.1126 0.1408 REMARK 3 5 2.0900 - 1.9400 1.00 2692 146 0.1129 0.1228 REMARK 3 6 1.9400 - 1.8300 1.00 2697 131 0.1197 0.1384 REMARK 3 7 1.8200 - 1.7300 1.00 2726 138 0.1264 0.1477 REMARK 3 8 1.7300 - 1.6600 1.00 2648 136 0.1371 0.1637 REMARK 3 9 1.6600 - 1.5900 1.00 2674 162 0.1489 0.1753 REMARK 3 10 1.5900 - 1.5400 1.00 2645 152 0.1636 0.1874 REMARK 3 11 1.5400 - 1.4900 1.00 2715 139 0.1732 0.1718 REMARK 3 12 1.4900 - 1.4500 1.00 2681 128 0.1822 0.2042 REMARK 3 13 1.4500 - 1.4100 1.00 2659 128 0.1953 0.1855 REMARK 3 14 1.4100 - 1.3800 1.00 2659 137 0.2164 0.2425 REMARK 3 15 1.3800 - 1.3400 1.00 2650 156 0.2284 0.2494 REMARK 3 16 1.3400 - 1.3200 1.00 2659 140 0.2465 0.2366 REMARK 3 17 1.3200 - 1.2900 0.99 2647 133 0.2674 0.2750 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.120 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.990 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 32 THROUGH 44 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.7719 -3.8606 -2.2644 REMARK 3 T TENSOR REMARK 3 T11: 0.2661 T22: 0.1893 REMARK 3 T33: 0.1609 T12: 0.0239 REMARK 3 T13: 0.0038 T23: -0.0455 REMARK 3 L TENSOR REMARK 3 L11: 2.2460 L22: 1.8517 REMARK 3 L33: 4.1719 L12: -0.7109 REMARK 3 L13: 0.7325 L23: 0.0101 REMARK 3 S TENSOR REMARK 3 S11: -0.2182 S12: -0.3663 S13: 0.3473 REMARK 3 S21: 0.2546 S22: 0.1451 S23: 0.0221 REMARK 3 S31: -0.4124 S32: -0.3836 S33: 0.0274 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 45 THROUGH 64 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.2484 -7.9943 -6.8188 REMARK 3 T TENSOR REMARK 3 T11: 0.1805 T22: 0.0971 REMARK 3 T33: 0.0799 T12: 0.0054 REMARK 3 T13: 0.0046 T23: -0.0144 REMARK 3 L TENSOR REMARK 3 L11: 3.6600 L22: 1.6225 REMARK 3 L33: 3.1741 L12: -0.1041 REMARK 3 L13: -1.2454 L23: 0.5924 REMARK 3 S TENSOR REMARK 3 S11: 0.0182 S12: -0.1837 S13: 0.0845 REMARK 3 S21: 0.0982 S22: 0.0970 S23: 0.0175 REMARK 3 S31: -0.0893 S32: 0.1236 S33: -0.1188 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 65 THROUGH 88 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.8406 -10.3612 -12.7599 REMARK 3 T TENSOR REMARK 3 T11: 0.1491 T22: 0.0682 REMARK 3 T33: 0.0741 T12: -0.0100 REMARK 3 T13: 0.0107 T23: -0.0108 REMARK 3 L TENSOR REMARK 3 L11: 3.8542 L22: 1.0924 REMARK 3 L33: 2.8622 L12: -0.4965 REMARK 3 L13: -1.5194 L23: 0.5393 REMARK 3 S TENSOR REMARK 3 S11: 0.0362 S12: 0.0390 S13: 0.1975 REMARK 3 S21: -0.0341 S22: 0.0676 S23: -0.0561 REMARK 3 S31: -0.0947 S32: 0.1278 S33: -0.0775 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 89 THROUGH 102 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.6963 -0.9004 -14.8703 REMARK 3 T TENSOR REMARK 3 T11: 0.2184 T22: 0.0831 REMARK 3 T33: 0.1317 T12: -0.0103 REMARK 3 T13: 0.0364 T23: -0.0086 REMARK 3 L TENSOR REMARK 3 L11: 4.2256 L22: 3.2890 REMARK 3 L33: 0.5774 L12: 1.9472 REMARK 3 L13: -0.1580 L23: -0.1055 REMARK 3 S TENSOR REMARK 3 S11: 0.0908 S12: -0.1100 S13: 0.4091 REMARK 3 S21: 0.0270 S22: 0.0066 S23: -0.0172 REMARK 3 S31: -0.3261 S32: 0.0741 S33: -0.0699 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 103 THROUGH 183 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.3112 -20.4902 -19.2541 REMARK 3 T TENSOR REMARK 3 T11: 0.1404 T22: 0.0937 REMARK 3 T33: 0.0576 T12: 0.0079 REMARK 3 T13: -0.0002 T23: -0.0156 REMARK 3 L TENSOR REMARK 3 L11: 1.3019 L22: 1.5073 REMARK 3 L33: 1.4821 L12: -0.0351 REMARK 3 L13: -0.2491 L23: -0.1541 REMARK 3 S TENSOR REMARK 3 S11: 0.0270 S12: 0.0710 S13: -0.0659 REMARK 3 S21: -0.0908 S22: 0.0128 S23: 0.0136 REMARK 3 S31: 0.0258 S32: 0.0507 S33: -0.0184 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 184 THROUGH 215 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.1376 -21.0410 -4.4388 REMARK 3 T TENSOR REMARK 3 T11: 0.1668 T22: 0.1245 REMARK 3 T33: 0.0706 T12: 0.0111 REMARK 3 T13: -0.0101 T23: 0.0052 REMARK 3 L TENSOR REMARK 3 L11: 0.9600 L22: 1.4641 REMARK 3 L33: 1.7354 L12: -0.0905 REMARK 3 L13: -0.1873 L23: -0.2612 REMARK 3 S TENSOR REMARK 3 S11: 0.0208 S12: -0.1397 S13: -0.0647 REMARK 3 S21: 0.1521 S22: 0.0365 S23: 0.0503 REMARK 3 S31: 0.0422 S32: 0.0594 S33: -0.0475 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 216 THROUGH 229 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.1647 -31.3618 -4.0419 REMARK 3 T TENSOR REMARK 3 T11: 0.2456 T22: 0.1763 REMARK 3 T33: 0.1169 T12: 0.0857 REMARK 3 T13: -0.0340 T23: 0.0065 REMARK 3 L TENSOR REMARK 3 L11: 4.6370 L22: 2.7201 REMARK 3 L33: 2.3745 L12: -0.2511 REMARK 3 L13: -0.1195 L23: -0.5880 REMARK 3 S TENSOR REMARK 3 S11: 0.0350 S12: -0.1766 S13: -0.3888 REMARK 3 S21: 0.1910 S22: 0.0153 S23: -0.1730 REMARK 3 S31: 0.5149 S32: 0.4329 S33: -0.0250 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 230 THROUGH 245 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.8463 -17.4070 -1.8700 REMARK 3 T TENSOR REMARK 3 T11: 0.1722 T22: 0.2563 REMARK 3 T33: 0.0726 T12: -0.0113 REMARK 3 T13: -0.0345 T23: 0.0061 REMARK 3 L TENSOR REMARK 3 L11: 2.2331 L22: 1.9036 REMARK 3 L33: 0.7589 L12: -0.6907 REMARK 3 L13: 0.5028 L23: -0.3256 REMARK 3 S TENSOR REMARK 3 S11: 0.0037 S12: -0.0855 S13: 0.0926 REMARK 3 S21: 0.2438 S22: -0.0298 S23: -0.2032 REMARK 3 S31: -0.1050 S32: 0.4744 S33: 0.0232 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 246 THROUGH 263 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.0996 -28.1701 3.9468 REMARK 3 T TENSOR REMARK 3 T11: 0.2556 T22: 0.1454 REMARK 3 T33: 0.1001 T12: 0.0228 REMARK 3 T13: -0.0158 T23: 0.0310 REMARK 3 L TENSOR REMARK 3 L11: 6.1819 L22: 4.4984 REMARK 3 L33: 3.7157 L12: 2.2389 REMARK 3 L13: -0.7027 L23: -0.7228 REMARK 3 S TENSOR REMARK 3 S11: -0.0674 S12: -0.2166 S13: -0.3927 REMARK 3 S21: 0.0779 S22: 0.0460 S23: -0.0156 REMARK 3 S31: 0.4003 S32: 0.0110 S33: -0.0054 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7A5Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-AUG-20. REMARK 100 THE DEPOSITION ID IS D_1292110704. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUL-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9159 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48222 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.290 REMARK 200 RESOLUTION RANGE LOW (A) : 49.970 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.29 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.31 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.7.16 REMARK 200 STARTING MODEL: 4BZ3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M MAGNESIUM CHLORIDE, 35% PEG 8000, REMARK 280 TRIS HCL, PH 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 32.32350 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.34000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 39.38300 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 32.32350 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.34000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 39.38300 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 32.32350 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 37.34000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 39.38300 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 32.32350 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 37.34000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 39.38300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -68.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 489 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 560 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 576 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 580 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 25 REMARK 465 PRO A 26 REMARK 465 VAL A 27 REMARK 465 ASP A 28 REMARK 465 SER A 29 REMARK 465 SER A 30 REMARK 465 GLY A 31 REMARK 465 VAL A 264 REMARK 465 VAL A 265 REMARK 465 GLU A 266 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 51 CG OD1 OD2 REMARK 470 LYS A 90 CG CD CE NZ REMARK 470 GLN A 228 CG CD OE1 NE2 REMARK 470 PHE A 235 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG A 262 CG CD NE CZ NH1 NH2 REMARK 470 SER A 263 CA C O CB OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH12 ARG A 225 O HOH A 407 1.44 REMARK 500 OG SER A 61 O HOH A 402 2.07 REMARK 500 O HOH A 404 O HOH A 574 2.09 REMARK 500 OE1 GLU A 146 O HOH A 404 2.10 REMARK 500 O VAL A 41 O HOH A 405 2.16 REMARK 500 OE2 GLU A 218 O HOH A 406 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD2 ASP A 247 O HOH A 480 6445 2.01 REMARK 500 O HOH A 429 O HOH A 429 4555 2.08 REMARK 500 OD2 ASP A 63 OG SER A 207 3455 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 84 145.03 75.54 REMARK 500 TRP A 87 66.97 68.76 REMARK 500 ALA A 178 -107.64 -154.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 QZH A 301 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 303 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 114 NE2 REMARK 620 2 HIS A 116 ND1 99.0 REMARK 620 3 HIS A 179 NE2 101.6 116.4 REMARK 620 4 QZH A 301 O09 117.0 101.5 119.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 304 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 118 OD2 REMARK 620 2 CYS A 198 SG 99.5 REMARK 620 3 HIS A 240 NE2 88.4 108.2 REMARK 620 4 QZH A 301 N04 92.2 151.1 98.4 REMARK 620 5 QZH A 301 O20 164.6 95.8 87.8 73.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 153 NE2 REMARK 620 2 HIS A 251 ND1 46.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 308 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 463 O REMARK 620 2 HOH A 546 O 92.6 REMARK 620 N 1 DBREF 7A5Z A 27 266 UNP Q9K2N0 Q9K2N0_PSEAI 27 266 SEQADV 7A5Z GLY A 25 UNP Q9K2N0 EXPRESSION TAG SEQADV 7A5Z PRO A 26 UNP Q9K2N0 EXPRESSION TAG SEQRES 1 A 242 GLY PRO VAL ASP SER SER GLY GLU TYR PRO THR VAL SER SEQRES 2 A 242 GLU ILE PRO VAL GLY GLU VAL ARG LEU TYR GLN ILE ALA SEQRES 3 A 242 ASP GLY VAL TRP SER HIS ILE ALA THR GLN SER PHE ASP SEQRES 4 A 242 GLY ALA VAL TYR PRO SER ASN GLY LEU ILE VAL ARG ASP SEQRES 5 A 242 GLY ASP GLU LEU LEU LEU ILE ASP THR ALA TRP GLY ALA SEQRES 6 A 242 LYS ASN THR ALA ALA LEU LEU ALA GLU ILE GLU LYS GLN SEQRES 7 A 242 ILE GLY LEU PRO VAL THR ARG ALA VAL SER THR HIS PHE SEQRES 8 A 242 HIS ASP ASP ARG VAL GLY GLY VAL ASP VAL LEU ARG ALA SEQRES 9 A 242 ALA GLY VAL ALA THR TYR ALA SER PRO SER THR ARG ARG SEQRES 10 A 242 LEU ALA GLU VAL GLU GLY ASN GLU ILE PRO THR HIS SER SEQRES 11 A 242 LEU GLU GLY LEU SER SER SER GLY ASP ALA VAL ARG PHE SEQRES 12 A 242 GLY PRO VAL GLU LEU PHE TYR PRO GLY ALA ALA HIS SER SEQRES 13 A 242 THR ASP ASN LEU VAL VAL TYR VAL PRO SER ALA SER VAL SEQRES 14 A 242 LEU TYR GLY GLY CYS ALA ILE TYR GLU LEU SER ARG THR SEQRES 15 A 242 SER ALA GLY ASN VAL ALA ASP ALA ASP LEU ALA GLU TRP SEQRES 16 A 242 PRO THR SER ILE GLU ARG ILE GLN GLN HIS TYR PRO GLU SEQRES 17 A 242 ALA GLN PHE VAL ILE PRO GLY HIS GLY LEU PRO GLY GLY SEQRES 18 A 242 LEU ASP LEU LEU LYS HIS THR THR ASN VAL VAL LYS ALA SEQRES 19 A 242 HIS THR ASN ARG SER VAL VAL GLU HET QZH A 301 33 HET ZN A 302 1 HET ZN A 303 1 HET ZN A 304 1 HET CL A 305 1 HET CL A 306 1 HET MG A 307 1 HET NA A 308 1 HETNAM QZH (5~{Z})-2-[1,3-BIS(OXIDANYL)-1-OXIDANYLIDENE-BUTAN-2- HETNAM 2 QZH YL]-5-(4-OXIDANYLBUTYLIDENE)-2~{H}-1,3-THIAZOLE-4- HETNAM 3 QZH CARBOXYLIC ACID HETNAM ZN ZINC ION HETNAM CL CHLORIDE ION HETNAM MG MAGNESIUM ION HETNAM NA SODIUM ION FORMUL 2 QZH C12 H17 N O6 S FORMUL 3 ZN 3(ZN 2+) FORMUL 6 CL 2(CL 1-) FORMUL 8 MG MG 2+ FORMUL 9 NA NA 1+ FORMUL 10 HOH *190(H2 O) HELIX 1 AA1 THR A 35 ILE A 39 5 5 HELIX 2 AA2 GLY A 88 ILE A 103 1 16 HELIX 3 AA3 HIS A 116 GLY A 121 1 6 HELIX 4 AA4 GLY A 122 ALA A 129 1 8 HELIX 5 AA5 SER A 136 GLY A 147 1 12 HELIX 6 AA6 CYS A 198 ILE A 200 5 3 HELIX 7 AA7 GLU A 218 TYR A 230 1 13 HELIX 8 AA8 LEU A 246 ARG A 262 1 17 SHEET 1 AA1 7 ARG A 45 ALA A 50 0 SHEET 2 AA1 7 VAL A 53 PHE A 62 -1 O ILE A 57 N ARG A 45 SHEET 3 AA1 7 ALA A 65 ASP A 76 -1 O ALA A 65 N PHE A 62 SHEET 4 AA1 7 GLU A 79 ILE A 83 -1 O GLU A 79 N ASP A 76 SHEET 5 AA1 7 VAL A 107 VAL A 111 1 O ARG A 109 N LEU A 82 SHEET 6 AA1 7 ALA A 132 ALA A 135 1 O ALA A 132 N THR A 108 SHEET 7 AA1 7 HIS A 153 SER A 154 1 O HIS A 153 N THR A 133 SHEET 1 AA2 5 ALA A 164 PHE A 167 0 SHEET 2 AA2 5 VAL A 170 PHE A 173 -1 O LEU A 172 N VAL A 165 SHEET 3 AA2 5 VAL A 185 VAL A 188 -1 O TYR A 187 N GLU A 171 SHEET 4 AA2 5 VAL A 193 GLY A 197 -1 O TYR A 195 N VAL A 186 SHEET 5 AA2 5 PHE A 235 PRO A 238 1 O PHE A 235 N LEU A 194 LINK NE2 HIS A 114 ZN ZN A 303 1555 1555 2.05 LINK ND1 HIS A 116 ZN ZN A 303 1555 1555 2.00 LINK OD2 ASP A 118 ZN ZN A 304 1555 1555 2.11 LINK OG BSER A 138 MG MG A 307 1555 1555 2.97 LINK NE2 HIS A 153 ZN ZN A 302 1555 1555 2.08 LINK NE2 HIS A 179 ZN ZN A 303 1555 1555 2.00 LINK SG CYS A 198 ZN ZN A 304 1555 1555 2.29 LINK NE2 HIS A 240 ZN ZN A 304 1555 1555 2.08 LINK ND1 HIS A 251 ZN ZN A 302 1555 6445 2.05 LINK O09 QZH A 301 ZN ZN A 303 1555 1555 1.90 LINK N04 QZH A 301 ZN ZN A 304 1555 1555 2.13 LINK O20 QZH A 301 ZN ZN A 304 1555 1555 2.27 LINK NA NA A 308 O HOH A 463 1555 1555 3.11 LINK NA NA A 308 O HOH A 546 1555 1555 3.17 CRYST1 64.647 74.680 78.766 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015469 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013391 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012696 0.00000