data_7A9S # _entry.id 7A9S # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.384 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7A9S pdb_00007a9s 10.2210/pdb7a9s/pdb WWPDB D_1292110999 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-05-26 2 'Structure model' 1 1 2021-12-15 3 'Structure model' 2 0 2023-07-26 4 'Structure model' 2 1 2024-01-31 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Polymer sequence' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' database_2 4 3 'Structure model' atom_type 5 3 'Structure model' entity_poly 6 4 'Structure model' chem_comp_atom 7 4 'Structure model' chem_comp_bond 8 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.journal_volume' 7 2 'Structure model' '_citation.page_first' 8 2 'Structure model' '_citation.page_last' 9 2 'Structure model' '_citation.pdbx_database_id_DOI' 10 2 'Structure model' '_citation.pdbx_database_id_PubMed' 11 2 'Structure model' '_citation.title' 12 2 'Structure model' '_citation.year' 13 2 'Structure model' '_citation_author.identifier_ORCID' 14 2 'Structure model' '_citation_author.name' 15 2 'Structure model' '_database_2.pdbx_DOI' 16 2 'Structure model' '_database_2.pdbx_database_accession' 17 3 'Structure model' '_atom_type.pdbx_N_electrons' 18 3 'Structure model' '_atom_type.pdbx_scat_Z' 19 3 'Structure model' '_entity_poly.type' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7A9S _pdbx_database_status.recvd_initial_deposition_date 2020-09-02 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB 'Another crystal of this form.' 6ZPF unspecified PDB 'Another crystal of this form.' 6ZQ9 unspecified PDB 'Another crystal of this form.' 6ZR1 unspecified PDB 'Another crystal of this form.' 6ZRL unspecified PDB 'Another crystal of this form.' 6ZRS unspecified PDB 'Another crystal of this form.' 6ZW3 unspecified PDB 'Another crystal of this form.' 6ZWU unspecified PDB 'Another crystal of this form.' 6ZX5 unspecified PDB 'Another crystal of this form.' 6ZX8 unspecified # _audit_author.name 'Rypniewski, W.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID 0000-0002-6097-5518 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 49 _citation.language ? _citation.page_first 12535 _citation.page_last 12539 _citation.title 'Broken symmetry between RNA enantiomers in a crystal lattice.' _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkab480 _citation.pdbx_database_id_PubMed 34107036 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kiliszek, A.' 1 0000-0002-2871-7535 primary 'Blaszczyk, L.' 2 0000-0002-1907-4857 primary 'Bejger, M.' 3 0000-0003-1660-9745 primary 'Rypniewski, W.' 4 0000-0002-6097-5518 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;RNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3') ; 2597.601 1 ? ? ? 'Chain K is D-enantiomer. It pairs with chain L.' 2 polymer syn ;RNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3') ; 2517.553 1 ? ? ? 'Chain L is D-enantiomer. It pairs with chain K.' 3 polymer syn ;RNA (5'-R(*(0C)P*(0U)P*(0G)P*(0G)P*(0G)P*(0C)P*(0G)P*(0G))-3') ; 2597.601 1 ? ? ? 'Chain M is L-enantiomer. It pairs with chain N.' 4 polymer syn ;RNA (5'-R(*(0C)P*(0C)P*(0G)P*(0C)P*(0C)P*(0U)P*(0G)P*(0G))-3') ; 2517.553 1 ? ? ? 'Chain N is L-enantiomer. It pairs with chain M.' 5 non-polymer syn 'ZINC ION' 65.409 7 ? ? ? ? 6 water nat water 18.015 98 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no CUGGGCGG CUGGGCGG K ? 2 polyribonucleotide no no CCGCCUGG CCGCCUGG L ? 3 polyribonucleotide no yes '(0C)(0U)(0G)(0G)(0G)(0C)(0G)(0G)' CUGGGCGG M ? 4 polyribonucleotide no yes '(0C)(0C)(0G)(0C)(0C)(0U)(0G)(0G)' CCGCCUGG N ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'ZINC ION' ZN 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 C n 1 2 U n 1 3 G n 1 4 G n 1 5 G n 1 6 C n 1 7 G n 1 8 G n 2 1 C n 2 2 C n 2 3 G n 2 4 C n 2 5 C n 2 6 U n 2 7 G n 2 8 G n 3 1 0C n 3 2 0U n 3 3 0G n 3 4 0G n 3 5 0G n 3 6 0C n 3 7 0G n 3 8 0G n 4 1 0C n 4 2 0C n 4 3 0G n 4 4 0C n 4 5 0C n 4 6 0U n 4 7 0G n 4 8 0G n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 8 'Thermus thermophilus' ? 274 ? 2 1 sample 1 8 'Thermus thermophilus' ? 274 ? 3 1 sample 1 8 'Thermus thermophilus' ? 274 ? 4 1 sample 1 8 'Thermus thermophilus' ? 274 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 0C 'L-RNA linking' . "L-CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 0G 'L-RNA linking' . "L-GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 0U 'L-RNA linking' . "L-URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 C 1 79 79 C C K . n A 1 2 U 2 80 80 U U K . n A 1 3 G 3 81 81 G G K . n A 1 4 G 4 82 82 G G K . n A 1 5 G 5 83 83 G G K . n A 1 6 C 6 84 84 C C K . n A 1 7 G 7 85 85 G G K . n A 1 8 G 8 86 86 G G K . n B 2 1 C 1 90 90 C C L . n B 2 2 C 2 91 91 C C L . n B 2 3 G 3 92 92 G G L . n B 2 4 C 4 93 93 C C L . n B 2 5 C 5 94 94 C C L . n B 2 6 U 6 95 95 U U L . n B 2 7 G 7 96 96 G G L . n B 2 8 G 8 97 97 G G L . n C 3 1 0C 1 79 79 0C 0C M . n C 3 2 0U 2 80 80 0U 0U M . n C 3 3 0G 3 81 81 0G 0G M . n C 3 4 0G 4 82 82 0G 0G M . n C 3 5 0G 5 83 83 0G 0G M . n C 3 6 0C 6 84 84 0C 0C M . n C 3 7 0G 7 85 85 0G 0G M . n C 3 8 0G 8 86 86 0G 0G M . n D 4 1 0C 1 90 90 0C 0C N . n D 4 2 0C 2 91 91 0C 0C N . n D 4 3 0G 3 92 92 0G 0G N . n D 4 4 0C 4 93 93 0C 0C N . n D 4 5 0C 5 94 94 0C 0C N . n D 4 6 0U 6 95 95 0U 0U N . n D 4 7 0G 7 96 96 0G 0G N . n D 4 8 0G 8 97 97 0G 0G N . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 ZN 1 101 1 ZN ZN K . F 5 ZN 1 102 3 ZN ZN K . G 5 ZN 1 101 7 ZN ZN L . H 5 ZN 1 102 10 ZN ZN L . I 5 ZN 1 101 2 ZN ZN M . J 5 ZN 1 102 4 ZN ZN M . K 5 ZN 1 101 8 ZN ZN N . L 6 HOH 1 201 94 HOH HOH K . L 6 HOH 2 202 39 HOH HOH K . L 6 HOH 3 203 1 HOH HOH K . L 6 HOH 4 204 65 HOH HOH K . L 6 HOH 5 205 67 HOH HOH K . L 6 HOH 6 206 44 HOH HOH K . L 6 HOH 7 207 29 HOH HOH K . L 6 HOH 8 208 69 HOH HOH K . L 6 HOH 9 209 7 HOH HOH K . L 6 HOH 10 210 25 HOH HOH K . L 6 HOH 11 211 28 HOH HOH K . L 6 HOH 12 212 68 HOH HOH K . L 6 HOH 13 213 16 HOH HOH K . L 6 HOH 14 214 17 HOH HOH K . L 6 HOH 15 215 84 HOH HOH K . L 6 HOH 16 216 33 HOH HOH K . L 6 HOH 17 217 21 HOH HOH K . L 6 HOH 18 218 41 HOH HOH K . L 6 HOH 19 219 66 HOH HOH K . L 6 HOH 20 220 40 HOH HOH K . L 6 HOH 21 221 48 HOH HOH K . L 6 HOH 22 222 4 HOH HOH K . L 6 HOH 23 223 70 HOH HOH K . M 6 HOH 1 201 74 HOH HOH L . M 6 HOH 2 202 93 HOH HOH L . M 6 HOH 3 203 46 HOH HOH L . M 6 HOH 4 204 10 HOH HOH L . M 6 HOH 5 205 12 HOH HOH L . M 6 HOH 6 206 73 HOH HOH L . M 6 HOH 7 207 32 HOH HOH L . M 6 HOH 8 208 43 HOH HOH L . M 6 HOH 9 209 80 HOH HOH L . M 6 HOH 10 210 86 HOH HOH L . M 6 HOH 11 211 22 HOH HOH L . M 6 HOH 12 212 45 HOH HOH L . M 6 HOH 13 213 51 HOH HOH L . M 6 HOH 14 214 97 HOH HOH L . M 6 HOH 15 215 14 HOH HOH L . M 6 HOH 16 216 9 HOH HOH L . M 6 HOH 17 217 52 HOH HOH L . M 6 HOH 18 218 81 HOH HOH L . M 6 HOH 19 219 55 HOH HOH L . M 6 HOH 20 220 58 HOH HOH L . M 6 HOH 21 221 95 HOH HOH L . M 6 HOH 22 222 63 HOH HOH L . M 6 HOH 23 223 60 HOH HOH L . M 6 HOH 24 224 72 HOH HOH L . N 6 HOH 1 201 92 HOH HOH M . N 6 HOH 2 202 26 HOH HOH M . N 6 HOH 3 203 59 HOH HOH M . N 6 HOH 4 204 38 HOH HOH M . N 6 HOH 5 205 35 HOH HOH M . N 6 HOH 6 206 34 HOH HOH M . N 6 HOH 7 207 5 HOH HOH M . N 6 HOH 8 208 2 HOH HOH M . N 6 HOH 9 209 31 HOH HOH M . N 6 HOH 10 210 88 HOH HOH M . N 6 HOH 11 211 13 HOH HOH M . N 6 HOH 12 212 20 HOH HOH M . N 6 HOH 13 213 42 HOH HOH M . N 6 HOH 14 214 11 HOH HOH M . N 6 HOH 15 215 8 HOH HOH M . N 6 HOH 16 216 57 HOH HOH M . N 6 HOH 17 217 6 HOH HOH M . N 6 HOH 18 218 23 HOH HOH M . N 6 HOH 19 219 49 HOH HOH M . N 6 HOH 20 220 91 HOH HOH M . N 6 HOH 21 221 3 HOH HOH M . N 6 HOH 22 222 54 HOH HOH M . N 6 HOH 23 223 15 HOH HOH M . N 6 HOH 24 224 61 HOH HOH M . N 6 HOH 25 225 82 HOH HOH M . N 6 HOH 26 226 96 HOH HOH M . N 6 HOH 27 227 37 HOH HOH M . N 6 HOH 28 228 24 HOH HOH M . N 6 HOH 29 229 87 HOH HOH M . N 6 HOH 30 230 71 HOH HOH M . O 6 HOH 1 201 78 HOH HOH N . O 6 HOH 2 202 30 HOH HOH N . O 6 HOH 3 203 77 HOH HOH N . O 6 HOH 4 204 18 HOH HOH N . O 6 HOH 5 205 79 HOH HOH N . O 6 HOH 6 206 27 HOH HOH N . O 6 HOH 7 207 76 HOH HOH N . O 6 HOH 8 208 19 HOH HOH N . O 6 HOH 9 209 85 HOH HOH N . O 6 HOH 10 210 53 HOH HOH N . O 6 HOH 11 211 89 HOH HOH N . O 6 HOH 12 212 90 HOH HOH N . O 6 HOH 13 213 98 HOH HOH N . O 6 HOH 14 214 36 HOH HOH N . O 6 HOH 15 215 50 HOH HOH N . O 6 HOH 16 216 83 HOH HOH N . O 6 HOH 17 217 56 HOH HOH N . O 6 HOH 18 218 62 HOH HOH N . O 6 HOH 19 219 75 HOH HOH N . O 6 HOH 20 220 47 HOH HOH N . O 6 HOH 21 221 64 HOH HOH N . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0258 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 105.044 _cell.angle_alpha_esd ? _cell.angle_beta 97.539 _cell.angle_beta_esd ? _cell.angle_gamma 91.127 _cell.angle_gamma_esd ? _cell.entry_id 7A9S _cell.details ? _cell.formula_units_Z ? _cell.length_a 21.193 _cell.length_a_esd ? _cell.length_b 26.339 _cell.length_b_esd ? _cell.length_c 38.928 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 1 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7A9S _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7A9S _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.08 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 40.93 _exptl_crystal.description needle _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2 M zinc acetate, 0.1 M cacodylate buffer, 18% w/v/ polyeth7ylene glycol 8000.' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2019-02-02 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.283 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'BESSY BEAMLINE 14.1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.283 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 14.1 _diffrn_source.pdbx_synchrotron_site BESSY # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 7A9S _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.29 _reflns.d_resolution_low 37.2 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 6237 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 85.7 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 1.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.133 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 3.87 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.189 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.972 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.29 _reflns_shell.d_res_low 2.43 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.38 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 924 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value 0.474 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.670 _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.631 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -0.400 _refine.aniso_B[1][2] 1.198 _refine.aniso_B[1][3] -0.666 _refine.aniso_B[2][2] 2.606 _refine.aniso_B[2][3] -0.111 _refine.aniso_B[3][3] -1.685 _refine.B_iso_max ? _refine.B_iso_mean 23.557 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.973 _refine.correlation_coeff_Fo_to_Fc_free 0.915 _refine.details 'Hydrogens have been added in their riding positions' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7A9S _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.29 _refine.ls_d_res_low 37.2 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 3286 _refine.ls_number_reflns_R_free 178 _refine.ls_number_reflns_R_work 3108 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 90.573 _refine.ls_percent_reflns_R_free 5.417 _refine.ls_R_factor_all 0.175 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free 0.2742 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1691 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 6ZQ9 _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.331 _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 8.489 _refine.overall_SU_ML 0.197 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 676 _refine_hist.pdbx_number_atoms_ligand 7 _refine_hist.number_atoms_solvent 98 _refine_hist.number_atoms_total 781 _refine_hist.d_res_high 2.29 _refine_hist.d_res_low 37.2 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 0.011 752 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.003 0.019 292 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.707 1.452 1168 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 2.269 2.383 726 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 0.116 0.200 128 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.015 0.020 412 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 124 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 0.191 0.200 125 ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.284 0.200 384 ? r_symmetry_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.256 0.200 258 ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? 0.095 0.200 153 ? r_symmetry_nbtor_other ? ? 'X-RAY DIFFRACTION' ? 0.290 0.200 90 ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.059 0.200 4 ? r_symmetry_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.091 0.200 6 ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? 0.049 0.200 7 ? r_symmetry_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.204 0.200 36 ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.245 0.200 10 ? r_symmetry_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 1.774 2.454 752 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 1.776 2.456 750 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? 2.735 3.687 1168 ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 2.734 3.687 1169 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 5.143 24.469 1074 ? r_lrange_it ? ? 'X-RAY DIFFRACTION' ? 4.725 23.808 1045 ? r_lrange_other ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.288 2.347 270 . 19 205 82.9630 . 0.408 . 0.445 . 0.405 . . . . . 0.387 . 20 . 0.683 0.609 'X-RAY DIFFRACTION' 2.347 2.411 261 . 12 219 88.5057 . 0.233 . 0.214 . 0.234 . . . . . 0.236 . 20 . 0.828 0.849 'X-RAY DIFFRACTION' 2.411 2.480 239 . 16 191 86.6109 . 0.258 . 0.391 . 0.249 . . . . . 0.243 . 20 . 0.835 0.771 'X-RAY DIFFRACTION' 2.480 2.556 252 . 13 202 85.3175 . 0.248 . 0.421 . 0.236 . . . . . 0.231 . 20 . 0.849 0.818 'X-RAY DIFFRACTION' 2.556 2.640 248 . 14 219 93.9516 . 0.205 . 0.286 . 0.199 . . . . . 0.198 . 20 . 0.895 0.887 'X-RAY DIFFRACTION' 2.640 2.732 222 . 7 202 94.1441 . 0.194 . 0.182 . 0.195 . . . . . 0.205 . 20 . 0.914 0.939 'X-RAY DIFFRACTION' 2.732 2.835 217 . 9 198 95.3917 . 0.192 . 0.278 . 0.188 . . . . . 0.188 . 20 . 0.913 0.860 'X-RAY DIFFRACTION' 2.835 2.950 223 . 11 198 93.7220 . 0.172 . 0.253 . 0.167 . . . . . 0.173 . 20 . 0.921 0.917 'X-RAY DIFFRACTION' 2.950 3.080 212 . 4 192 92.4528 . 0.174 . 0.372 . 0.170 . . . . . 0.178 . 20 . 0.938 0.885 'X-RAY DIFFRACTION' 3.080 3.229 183 . 7 157 89.6175 . 0.141 . 0.113 . 0.143 . . . . . 0.174 . 20 . 0.965 0.956 'X-RAY DIFFRACTION' 3.229 3.402 197 . 13 167 91.3706 . 0.136 . 0.300 . 0.125 . . . . . 0.150 . 20 . 0.972 0.917 'X-RAY DIFFRACTION' 3.402 3.607 174 . 10 139 85.6322 . 0.152 . 0.357 . 0.142 . . . . . 0.156 . 20 . 0.950 0.921 'X-RAY DIFFRACTION' 3.607 3.853 168 . 9 150 94.6429 . 0.144 . 0.279 . 0.138 . . . . . 0.176 . 20 . 0.968 0.831 'X-RAY DIFFRACTION' 3.853 4.158 161 . 3 149 94.4099 . 0.111 . 0.295 . 0.108 . . . . . 0.131 . 20 . 0.971 0.831 'X-RAY DIFFRACTION' 4.158 4.549 134 . 10 117 94.7761 . 0.152 . 0.229 . 0.144 . . . . . 0.165 . 20 . 0.961 0.963 'X-RAY DIFFRACTION' 4.549 5.077 130 . 5 116 93.0769 . 0.127 . 0.186 . 0.124 . . . . . 0.154 . 20 . 0.967 0.960 'X-RAY DIFFRACTION' 5.077 5.844 119 . 9 99 90.7563 . 0.153 . 0.201 . 0.148 . . . . . 0.196 . 20 . 0.968 0.952 'X-RAY DIFFRACTION' 5.844 7.114 101 . 3 81 83.1683 . 0.181 . 0.377 . 0.175 . . . . . 0.246 . 20 . 0.952 0.853 'X-RAY DIFFRACTION' 7.114 9.882 73 . 3 66 94.5205 . 0.253 . 0.781 . 0.240 . . . . . 0.276 . 20 . 0.918 0.323 'X-RAY DIFFRACTION' 9.882 37.217 44 . 1 41 95.4545 . 0.157 . 0.114 . 0.159 . . . . . 0.211 . 20 . 0.964 0.001 # _struct.entry_id 7A9S _struct.title 'Racemic compound of RNA duplexes.' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7A9S _struct_keywords.text 'racemic compound, RNA' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 5 ? I N N 5 ? J N N 5 ? K N N 5 ? L N N 6 ? M N N 6 ? N N N 6 ? O N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 7A9S 7A9S ? 1 ? 1 2 PDB 7A9S 7A9S ? 2 ? 1 3 PDB 7A9S 7A9S ? 3 ? 1 4 PDB 7A9S 7A9S ? 4 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7A9S K 1 ? 8 ? 7A9S 79 ? 86 ? 79 86 2 2 7A9S L 1 ? 8 ? 7A9S 90 ? 97 ? 90 97 3 3 7A9S M 1 ? 8 ? 7A9S 79 ? 86 ? 79 86 4 4 7A9S N 1 ? 8 ? 7A9S 90 ? 97 ? 90 97 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 author_defined_assembly ? dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,E,F,G,H,L,M 2 1 C,D,I,J,K,N,O # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 homology 'The duplex if formed by base pairing.' 2 2 homology 'The duplex if formed by base pairing.' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? C 0C 1 "O3'" ? ? ? 1_555 C 0U 2 P ? ? M 0C 79 M 0U 80 1_555 ? ? ? ? ? ? ? 1.601 ? ? covale2 covale both ? C 0U 2 "O3'" ? ? ? 1_555 C 0G 3 P ? ? M 0U 80 M 0G 81 1_555 ? ? ? ? ? ? ? 1.592 ? ? covale3 covale both ? C 0G 3 "O3'" ? ? ? 1_555 C 0G 4 P ? ? M 0G 81 M 0G 82 1_555 ? ? ? ? ? ? ? 1.584 ? ? covale4 covale both ? C 0G 4 "O3'" ? ? ? 1_555 C 0G 5 P ? ? M 0G 82 M 0G 83 1_555 ? ? ? ? ? ? ? 1.597 ? ? covale5 covale both ? C 0G 5 "O3'" ? ? ? 1_555 C 0C 6 P ? ? M 0G 83 M 0C 84 1_555 ? ? ? ? ? ? ? 1.636 ? ? covale6 covale both ? C 0C 6 "O3'" ? ? ? 1_555 C 0G 7 P ? ? M 0C 84 M 0G 85 1_555 ? ? ? ? ? ? ? 1.649 ? ? covale7 covale both ? C 0G 7 "O3'" ? ? ? 1_555 C 0G 8 P ? ? M 0G 85 M 0G 86 1_555 ? ? ? ? ? ? ? 1.577 ? ? covale8 covale both ? D 0C 1 "O3'" ? ? ? 1_555 D 0C 2 P ? ? N 0C 90 N 0C 91 1_555 ? ? ? ? ? ? ? 1.609 ? ? covale9 covale both ? D 0C 2 "O3'" ? ? ? 1_555 D 0G 3 P ? ? N 0C 91 N 0G 92 1_555 ? ? ? ? ? ? ? 1.614 ? ? covale10 covale both ? D 0G 3 "O3'" ? ? ? 1_555 D 0C 4 P ? ? N 0G 92 N 0C 93 1_555 ? ? ? ? ? ? ? 1.580 ? ? covale11 covale both ? D 0C 4 "O3'" ? ? ? 1_555 D 0C 5 P ? ? N 0C 93 N 0C 94 1_555 ? ? ? ? ? ? ? 1.618 ? ? covale12 covale both ? D 0C 5 "O3'" ? ? ? 1_555 D 0U 6 P ? ? N 0C 94 N 0U 95 1_555 ? ? ? ? ? ? ? 1.583 ? ? covale13 covale both ? D 0U 6 "O3'" ? ? ? 1_555 D 0G 7 P ? ? N 0U 95 N 0G 96 1_555 ? ? ? ? ? ? ? 1.603 ? ? covale14 covale both ? D 0G 7 "O3'" ? ? ? 1_555 D 0G 8 P ? ? N 0G 96 N 0G 97 1_555 ? ? ? ? ? ? ? 1.611 ? ? metalc1 metalc ? ? A G 4 N7 ? ? ? 1_555 E ZN . ZN ? ? K G 82 K ZN 101 1_555 ? ? ? ? ? ? ? 2.063 ? ? metalc2 metalc ? ? E ZN . ZN ? ? ? 1_555 L HOH . O ? ? K ZN 101 K HOH 203 1_555 ? ? ? ? ? ? ? 2.559 ? ? metalc3 metalc ? ? E ZN . ZN ? ? ? 1_555 L HOH . O ? ? K ZN 101 K HOH 204 1_555 ? ? ? ? ? ? ? 2.096 ? ? metalc4 metalc ? ? E ZN . ZN ? ? ? 1_555 L HOH . O ? ? K ZN 101 K HOH 214 1_555 ? ? ? ? ? ? ? 1.986 ? ? metalc5 metalc ? ? E ZN . ZN ? ? ? 1_555 L HOH . O ? ? K ZN 101 K HOH 219 1_555 ? ? ? ? ? ? ? 2.108 ? ? metalc6 metalc ? ? E ZN . ZN ? ? ? 1_555 L HOH . O ? ? K ZN 101 K HOH 222 1_555 ? ? ? ? ? ? ? 2.359 ? ? metalc7 metalc ? ? F ZN . ZN ? ? ? 1_555 L HOH . O ? ? K ZN 102 K HOH 201 1_555 ? ? ? ? ? ? ? 1.932 ? ? metalc8 metalc ? ? F ZN . ZN ? ? ? 1_555 L HOH . O ? ? K ZN 102 K HOH 205 1_555 ? ? ? ? ? ? ? 2.149 ? ? metalc9 metalc ? ? F ZN . ZN ? ? ? 1_555 L HOH . O ? ? K ZN 102 K HOH 208 1_555 ? ? ? ? ? ? ? 1.920 ? ? metalc10 metalc ? ? G ZN . ZN ? ? ? 1_555 M HOH . O ? ? L ZN 101 L HOH 201 1_555 ? ? ? ? ? ? ? 2.128 ? ? metalc11 metalc ? ? G ZN . ZN ? ? ? 1_555 M HOH . O ? ? L ZN 101 L HOH 203 1_555 ? ? ? ? ? ? ? 2.661 ? ? metalc12 metalc ? ? G ZN . ZN ? ? ? 1_555 M HOH . O ? ? L ZN 101 L HOH 206 1_555 ? ? ? ? ? ? ? 2.041 ? ? metalc13 metalc ? ? G ZN . ZN ? ? ? 1_555 M HOH . O ? ? L ZN 101 L HOH 209 1_555 ? ? ? ? ? ? ? 1.954 ? ? metalc14 metalc ? ? G ZN . ZN ? ? ? 1_555 M HOH . O ? ? L ZN 101 L HOH 210 1_555 ? ? ? ? ? ? ? 2.101 ? ? metalc15 metalc ? ? G ZN . ZN ? ? ? 1_555 M HOH . O ? ? L ZN 101 L HOH 224 1_555 ? ? ? ? ? ? ? 2.564 ? ? metalc16 metalc ? ? G ZN . ZN ? ? ? 1_555 O HOH . O ? ? L ZN 101 N HOH 219 1_456 ? ? ? ? ? ? ? 2.398 ? ? metalc17 metalc ? ? H ZN . ZN ? ? ? 1_555 M HOH . O ? ? L ZN 102 L HOH 223 1_555 ? ? ? ? ? ? ? 2.684 ? ? metalc18 metalc ? ? H ZN . ZN ? ? ? 1_555 N HOH . O ? ? L ZN 102 M HOH 209 1_566 ? ? ? ? ? ? ? 2.518 ? ? metalc19 metalc ? ? M HOH . O ? ? ? 1_555 K ZN . ZN ? ? L HOH 221 N ZN 101 1_555 ? ? ? ? ? ? ? 2.338 ? ? metalc20 metalc ? ? M HOH . O ? ? ? 1_555 K ZN . ZN ? ? L HOH 222 N ZN 101 1_555 ? ? ? ? ? ? ? 2.200 ? ? metalc21 metalc ? ? C 0G 4 N7 ? ? ? 1_555 I ZN . ZN ? ? M 0G 82 M ZN 101 1_555 ? ? ? ? ? ? ? 2.194 ? ? metalc22 metalc ? ? I ZN . ZN ? ? ? 1_555 N HOH . O ? ? M ZN 101 M HOH 203 1_555 ? ? ? ? ? ? ? 1.928 ? ? metalc23 metalc ? ? I ZN . ZN ? ? ? 1_555 N HOH . O ? ? M ZN 101 M HOH 204 1_555 ? ? ? ? ? ? ? 2.191 ? ? metalc24 metalc ? ? I ZN . ZN ? ? ? 1_555 N HOH . O ? ? M ZN 101 M HOH 212 1_555 ? ? ? ? ? ? ? 2.135 ? ? metalc25 metalc ? ? I ZN . ZN ? ? ? 1_555 N HOH . O ? ? M ZN 101 M HOH 221 1_555 ? ? ? ? ? ? ? 2.143 ? ? metalc26 metalc ? ? I ZN . ZN ? ? ? 1_555 N HOH . O ? ? M ZN 101 M HOH 229 1_555 ? ? ? ? ? ? ? 2.261 ? ? metalc27 metalc ? ? J ZN . ZN ? ? ? 1_555 N HOH . O ? ? M ZN 102 M HOH 201 1_555 ? ? ? ? ? ? ? 2.528 ? ? metalc28 metalc ? ? J ZN . ZN ? ? ? 1_555 N HOH . O ? ? M ZN 102 M HOH 210 1_555 ? ? ? ? ? ? ? 2.041 ? ? metalc29 metalc ? ? J ZN . ZN ? ? ? 1_555 N HOH . O ? ? M ZN 102 M HOH 216 1_555 ? ? ? ? ? ? ? 2.252 ? ? metalc30 metalc ? ? J ZN . ZN ? ? ? 1_555 N HOH . O ? ? M ZN 102 M HOH 230 1_555 ? ? ? ? ? ? ? 1.883 ? ? metalc31 metalc ? ? K ZN . ZN ? ? ? 1_555 O HOH . O ? ? N ZN 101 N HOH 203 1_555 ? ? ? ? ? ? ? 2.147 ? ? metalc32 metalc ? ? K ZN . ZN ? ? ? 1_555 O HOH . O ? ? N ZN 101 N HOH 207 1_555 ? ? ? ? ? ? ? 2.584 ? ? metalc33 metalc ? ? K ZN . ZN ? ? ? 1_555 O HOH . O ? ? N ZN 101 N HOH 212 1_555 ? ? ? ? ? ? ? 2.205 ? ? metalc34 metalc ? ? K ZN . ZN ? ? ? 1_555 O HOH . O ? ? N ZN 101 N HOH 221 1_555 ? ? ? ? ? ? ? 2.410 ? ? hydrog1 hydrog ? ? A C 1 N3 ? ? ? 1_555 B G 8 N1 ? ? K C 79 L G 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A C 1 N4 ? ? ? 1_555 B G 8 O6 ? ? K C 79 L G 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A C 1 O2 ? ? ? 1_555 B G 8 N2 ? ? K C 79 L G 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A U 2 N3 ? ? ? 1_555 B G 7 O6 ? ? K U 80 L G 96 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog5 hydrog ? ? A U 2 O2 ? ? ? 1_555 B G 7 N1 ? ? K U 80 L G 96 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog6 hydrog ? ? A G 3 N1 ? ? ? 1_555 B U 6 O2 ? ? K G 81 L U 95 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog7 hydrog ? ? A G 3 O6 ? ? ? 1_555 B U 6 N3 ? ? K G 81 L U 95 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog8 hydrog ? ? A G 4 N1 ? ? ? 1_555 B C 5 N3 ? ? K G 82 L C 94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 4 N2 ? ? ? 1_555 B C 5 O2 ? ? K G 82 L C 94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 4 O6 ? ? ? 1_555 B C 5 N4 ? ? K G 82 L C 94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 5 N1 ? ? ? 1_555 B C 4 N3 ? ? K G 83 L C 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 5 N2 ? ? ? 1_555 B C 4 O2 ? ? K G 83 L C 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 5 O6 ? ? ? 1_555 B C 4 N4 ? ? K G 83 L C 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A C 6 N3 ? ? ? 1_555 B G 3 N1 ? ? K C 84 L G 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A C 6 N4 ? ? ? 1_555 B G 3 O6 ? ? K C 84 L G 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A C 6 O2 ? ? ? 1_555 B G 3 N2 ? ? K C 84 L G 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 7 N1 ? ? ? 1_555 B C 2 N3 ? ? K G 85 L C 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A G 7 N2 ? ? ? 1_555 B C 2 O2 ? ? K G 85 L C 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A G 7 O6 ? ? ? 1_555 B C 2 N4 ? ? K G 85 L C 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 8 N1 ? ? ? 1_555 B C 1 N3 ? ? K G 86 L C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 8 N2 ? ? ? 1_555 B C 1 O2 ? ? K G 86 L C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A G 8 O6 ? ? ? 1_555 B C 1 N4 ? ? K G 86 L C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C 0C 1 N3 ? ? ? 1_555 D 0G 8 N1 ? ? M 0C 79 N 0G 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C 0C 1 N4 ? ? ? 1_555 D 0G 8 O6 ? ? M 0C 79 N 0G 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C 0C 1 O2 ? ? ? 1_555 D 0G 8 N2 ? ? M 0C 79 N 0G 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C 0U 2 N3 ? ? ? 1_555 D 0G 7 O6 ? ? M 0U 80 N 0G 96 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog27 hydrog ? ? C 0U 2 O2 ? ? ? 1_555 D 0G 7 N1 ? ? M 0U 80 N 0G 96 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog28 hydrog ? ? C 0G 3 N1 ? ? ? 1_555 D 0U 6 O2 ? ? M 0G 81 N 0U 95 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog29 hydrog ? ? C 0G 3 O6 ? ? ? 1_555 D 0U 6 N3 ? ? M 0G 81 N 0U 95 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog30 hydrog ? ? C 0G 4 N1 ? ? ? 1_555 D 0C 5 N3 ? ? M 0G 82 N 0C 94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C 0G 4 N2 ? ? ? 1_555 D 0C 5 O2 ? ? M 0G 82 N 0C 94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C 0G 4 O6 ? ? ? 1_555 D 0C 5 N4 ? ? M 0G 82 N 0C 94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C 0G 5 N1 ? ? ? 1_555 D 0C 4 N3 ? ? M 0G 83 N 0C 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C 0G 5 N2 ? ? ? 1_555 D 0C 4 O2 ? ? M 0G 83 N 0C 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C 0G 5 O6 ? ? ? 1_555 D 0C 4 N4 ? ? M 0G 83 N 0C 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C 0C 6 N3 ? ? ? 1_555 D 0G 3 N1 ? ? M 0C 84 N 0G 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C 0C 6 N4 ? ? ? 1_555 D 0G 3 O6 ? ? M 0C 84 N 0G 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C 0C 6 O2 ? ? ? 1_555 D 0G 3 N2 ? ? M 0C 84 N 0G 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C 0G 7 N1 ? ? ? 1_555 D 0C 2 N3 ? ? M 0G 85 N 0C 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C 0G 7 N2 ? ? ? 1_555 D 0C 2 O2 ? ? M 0G 85 N 0C 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C 0G 7 O6 ? ? ? 1_555 D 0C 2 N4 ? ? M 0G 85 N 0C 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C 0G 8 N1 ? ? ? 1_555 D 0C 1 N3 ? ? M 0G 86 N 0C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C 0G 8 N2 ? ? ? 1_555 D 0C 1 O2 ? ? M 0G 86 N 0C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? C 0G 8 O6 ? ? ? 1_555 D 0C 1 N4 ? ? M 0G 86 N 0C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 N7 ? A G 4 ? K G 82 ? 1_555 ZN ? E ZN . ? K ZN 101 ? 1_555 O ? L HOH . ? K HOH 203 ? 1_555 91.3 ? 2 N7 ? A G 4 ? K G 82 ? 1_555 ZN ? E ZN . ? K ZN 101 ? 1_555 O ? L HOH . ? K HOH 204 ? 1_555 87.1 ? 3 O ? L HOH . ? K HOH 203 ? 1_555 ZN ? E ZN . ? K ZN 101 ? 1_555 O ? L HOH . ? K HOH 204 ? 1_555 91.0 ? 4 N7 ? A G 4 ? K G 82 ? 1_555 ZN ? E ZN . ? K ZN 101 ? 1_555 O ? L HOH . ? K HOH 214 ? 1_555 99.1 ? 5 O ? L HOH . ? K HOH 203 ? 1_555 ZN ? E ZN . ? K ZN 101 ? 1_555 O ? L HOH . ? K HOH 214 ? 1_555 164.6 ? 6 O ? L HOH . ? K HOH 204 ? 1_555 ZN ? E ZN . ? K ZN 101 ? 1_555 O ? L HOH . ? K HOH 214 ? 1_555 100.9 ? 7 N7 ? A G 4 ? K G 82 ? 1_555 ZN ? E ZN . ? K ZN 101 ? 1_555 O ? L HOH . ? K HOH 219 ? 1_555 103.1 ? 8 O ? L HOH . ? K HOH 203 ? 1_555 ZN ? E ZN . ? K ZN 101 ? 1_555 O ? L HOH . ? K HOH 219 ? 1_555 72.7 ? 9 O ? L HOH . ? K HOH 204 ? 1_555 ZN ? E ZN . ? K ZN 101 ? 1_555 O ? L HOH . ? K HOH 219 ? 1_555 160.8 ? 10 O ? L HOH . ? K HOH 214 ? 1_555 ZN ? E ZN . ? K ZN 101 ? 1_555 O ? L HOH . ? K HOH 219 ? 1_555 93.7 ? 11 N7 ? A G 4 ? K G 82 ? 1_555 ZN ? E ZN . ? K ZN 101 ? 1_555 O ? L HOH . ? K HOH 222 ? 1_555 147.3 ? 12 O ? L HOH . ? K HOH 203 ? 1_555 ZN ? E ZN . ? K ZN 101 ? 1_555 O ? L HOH . ? K HOH 222 ? 1_555 91.2 ? 13 O ? L HOH . ? K HOH 204 ? 1_555 ZN ? E ZN . ? K ZN 101 ? 1_555 O ? L HOH . ? K HOH 222 ? 1_555 60.3 ? 14 O ? L HOH . ? K HOH 214 ? 1_555 ZN ? E ZN . ? K ZN 101 ? 1_555 O ? L HOH . ? K HOH 222 ? 1_555 86.2 ? 15 O ? L HOH . ? K HOH 219 ? 1_555 ZN ? E ZN . ? K ZN 101 ? 1_555 O ? L HOH . ? K HOH 222 ? 1_555 108.8 ? 16 O ? L HOH . ? K HOH 201 ? 1_555 ZN ? F ZN . ? K ZN 102 ? 1_555 O ? L HOH . ? K HOH 205 ? 1_555 95.9 ? 17 O ? L HOH . ? K HOH 201 ? 1_555 ZN ? F ZN . ? K ZN 102 ? 1_555 O ? L HOH . ? K HOH 208 ? 1_555 89.6 ? 18 O ? L HOH . ? K HOH 205 ? 1_555 ZN ? F ZN . ? K ZN 102 ? 1_555 O ? L HOH . ? K HOH 208 ? 1_555 67.2 ? 19 O ? M HOH . ? L HOH 201 ? 1_555 ZN ? G ZN . ? L ZN 101 ? 1_555 O ? M HOH . ? L HOH 203 ? 1_555 64.7 ? 20 O ? M HOH . ? L HOH 201 ? 1_555 ZN ? G ZN . ? L ZN 101 ? 1_555 O ? M HOH . ? L HOH 206 ? 1_555 99.4 ? 21 O ? M HOH . ? L HOH 203 ? 1_555 ZN ? G ZN . ? L ZN 101 ? 1_555 O ? M HOH . ? L HOH 206 ? 1_555 114.7 ? 22 O ? M HOH . ? L HOH 201 ? 1_555 ZN ? G ZN . ? L ZN 101 ? 1_555 O ? M HOH . ? L HOH 209 ? 1_555 90.5 ? 23 O ? M HOH . ? L HOH 203 ? 1_555 ZN ? G ZN . ? L ZN 101 ? 1_555 O ? M HOH . ? L HOH 209 ? 1_555 56.4 ? 24 O ? M HOH . ? L HOH 206 ? 1_555 ZN ? G ZN . ? L ZN 101 ? 1_555 O ? M HOH . ? L HOH 209 ? 1_555 61.4 ? 25 O ? M HOH . ? L HOH 201 ? 1_555 ZN ? G ZN . ? L ZN 101 ? 1_555 O ? M HOH . ? L HOH 210 ? 1_555 72.6 ? 26 O ? M HOH . ? L HOH 203 ? 1_555 ZN ? G ZN . ? L ZN 101 ? 1_555 O ? M HOH . ? L HOH 210 ? 1_555 125.5 ? 27 O ? M HOH . ? L HOH 206 ? 1_555 ZN ? G ZN . ? L ZN 101 ? 1_555 O ? M HOH . ? L HOH 210 ? 1_555 104.1 ? 28 O ? M HOH . ? L HOH 209 ? 1_555 ZN ? G ZN . ? L ZN 101 ? 1_555 O ? M HOH . ? L HOH 210 ? 1_555 156.2 ? 29 O ? M HOH . ? L HOH 201 ? 1_555 ZN ? G ZN . ? L ZN 101 ? 1_555 O ? M HOH . ? L HOH 224 ? 1_555 163.0 ? 30 O ? M HOH . ? L HOH 203 ? 1_555 ZN ? G ZN . ? L ZN 101 ? 1_555 O ? M HOH . ? L HOH 224 ? 1_555 132.2 ? 31 O ? M HOH . ? L HOH 206 ? 1_555 ZN ? G ZN . ? L ZN 101 ? 1_555 O ? M HOH . ? L HOH 224 ? 1_555 73.0 ? 32 O ? M HOH . ? L HOH 209 ? 1_555 ZN ? G ZN . ? L ZN 101 ? 1_555 O ? M HOH . ? L HOH 224 ? 1_555 98.6 ? 33 O ? M HOH . ? L HOH 210 ? 1_555 ZN ? G ZN . ? L ZN 101 ? 1_555 O ? M HOH . ? L HOH 224 ? 1_555 94.1 ? 34 O ? M HOH . ? L HOH 201 ? 1_555 ZN ? G ZN . ? L ZN 101 ? 1_555 O ? O HOH . ? N HOH 219 ? 1_456 110.0 ? 35 O ? M HOH . ? L HOH 203 ? 1_555 ZN ? G ZN . ? L ZN 101 ? 1_555 O ? O HOH . ? N HOH 219 ? 1_456 75.7 ? 36 O ? M HOH . ? L HOH 206 ? 1_555 ZN ? G ZN . ? L ZN 101 ? 1_555 O ? O HOH . ? N HOH 219 ? 1_456 150.2 ? 37 O ? M HOH . ? L HOH 209 ? 1_555 ZN ? G ZN . ? L ZN 101 ? 1_555 O ? O HOH . ? N HOH 219 ? 1_456 112.6 ? 38 O ? M HOH . ? L HOH 210 ? 1_555 ZN ? G ZN . ? L ZN 101 ? 1_555 O ? O HOH . ? N HOH 219 ? 1_456 89.3 ? 39 O ? M HOH . ? L HOH 224 ? 1_555 ZN ? G ZN . ? L ZN 101 ? 1_555 O ? O HOH . ? N HOH 219 ? 1_456 79.7 ? 40 O ? M HOH . ? L HOH 223 ? 1_555 ZN ? H ZN . ? L ZN 102 ? 1_555 O ? N HOH . ? M HOH 209 ? 1_566 168.5 ? 41 O ? M HOH . ? L HOH 221 ? 1_555 ZN ? K ZN . ? N ZN 101 ? 1_555 O ? M HOH . ? L HOH 222 ? 1_555 62.2 ? 42 O ? M HOH . ? L HOH 221 ? 1_555 ZN ? K ZN . ? N ZN 101 ? 1_555 O ? O HOH . ? N HOH 203 ? 1_555 153.5 ? 43 O ? M HOH . ? L HOH 222 ? 1_555 ZN ? K ZN . ? N ZN 101 ? 1_555 O ? O HOH . ? N HOH 203 ? 1_555 103.8 ? 44 O ? M HOH . ? L HOH 221 ? 1_555 ZN ? K ZN . ? N ZN 101 ? 1_555 O ? O HOH . ? N HOH 207 ? 1_555 81.6 ? 45 O ? M HOH . ? L HOH 222 ? 1_555 ZN ? K ZN . ? N ZN 101 ? 1_555 O ? O HOH . ? N HOH 207 ? 1_555 79.1 ? 46 O ? O HOH . ? N HOH 203 ? 1_555 ZN ? K ZN . ? N ZN 101 ? 1_555 O ? O HOH . ? N HOH 207 ? 1_555 73.4 ? 47 O ? M HOH . ? L HOH 221 ? 1_555 ZN ? K ZN . ? N ZN 101 ? 1_555 O ? O HOH . ? N HOH 212 ? 1_555 92.3 ? 48 O ? M HOH . ? L HOH 222 ? 1_555 ZN ? K ZN . ? N ZN 101 ? 1_555 O ? O HOH . ? N HOH 212 ? 1_555 154.1 ? 49 O ? O HOH . ? N HOH 203 ? 1_555 ZN ? K ZN . ? N ZN 101 ? 1_555 O ? O HOH . ? N HOH 212 ? 1_555 101.4 ? 50 O ? O HOH . ? N HOH 207 ? 1_555 ZN ? K ZN . ? N ZN 101 ? 1_555 O ? O HOH . ? N HOH 212 ? 1_555 102.5 ? 51 O ? M HOH . ? L HOH 221 ? 1_555 ZN ? K ZN . ? N ZN 101 ? 1_555 O ? O HOH . ? N HOH 221 ? 1_555 88.7 ? 52 O ? M HOH . ? L HOH 222 ? 1_555 ZN ? K ZN . ? N ZN 101 ? 1_555 O ? O HOH . ? N HOH 221 ? 1_555 66.9 ? 53 O ? O HOH . ? N HOH 203 ? 1_555 ZN ? K ZN . ? N ZN 101 ? 1_555 O ? O HOH . ? N HOH 221 ? 1_555 106.9 ? 54 O ? O HOH . ? N HOH 207 ? 1_555 ZN ? K ZN . ? N ZN 101 ? 1_555 O ? O HOH . ? N HOH 221 ? 1_555 145.3 ? 55 O ? O HOH . ? N HOH 212 ? 1_555 ZN ? K ZN . ? N ZN 101 ? 1_555 O ? O HOH . ? N HOH 221 ? 1_555 111.2 ? 56 N7 ? C 0G 4 ? M 0G 82 ? 1_555 ZN ? I ZN . ? M ZN 101 ? 1_555 O ? N HOH . ? M HOH 203 ? 1_555 72.8 ? 57 N7 ? C 0G 4 ? M 0G 82 ? 1_555 ZN ? I ZN . ? M ZN 101 ? 1_555 O ? N HOH . ? M HOH 204 ? 1_555 100.0 ? 58 O ? N HOH . ? M HOH 203 ? 1_555 ZN ? I ZN . ? M ZN 101 ? 1_555 O ? N HOH . ? M HOH 204 ? 1_555 172.8 ? 59 N7 ? C 0G 4 ? M 0G 82 ? 1_555 ZN ? I ZN . ? M ZN 101 ? 1_555 O ? N HOH . ? M HOH 212 ? 1_555 97.5 ? 60 O ? N HOH . ? M HOH 203 ? 1_555 ZN ? I ZN . ? M ZN 101 ? 1_555 O ? N HOH . ? M HOH 212 ? 1_555 96.7 ? 61 O ? N HOH . ? M HOH 204 ? 1_555 ZN ? I ZN . ? M ZN 101 ? 1_555 O ? N HOH . ? M HOH 212 ? 1_555 84.3 ? 62 N7 ? C 0G 4 ? M 0G 82 ? 1_555 ZN ? I ZN . ? M ZN 101 ? 1_555 O ? N HOH . ? M HOH 221 ? 1_555 98.2 ? 63 O ? N HOH . ? M HOH 203 ? 1_555 ZN ? I ZN . ? M ZN 101 ? 1_555 O ? N HOH . ? M HOH 221 ? 1_555 89.0 ? 64 O ? N HOH . ? M HOH 204 ? 1_555 ZN ? I ZN . ? M ZN 101 ? 1_555 O ? N HOH . ? M HOH 221 ? 1_555 91.9 ? 65 O ? N HOH . ? M HOH 212 ? 1_555 ZN ? I ZN . ? M ZN 101 ? 1_555 O ? N HOH . ? M HOH 221 ? 1_555 164.3 ? 66 N7 ? C 0G 4 ? M 0G 82 ? 1_555 ZN ? I ZN . ? M ZN 101 ? 1_555 O ? N HOH . ? M HOH 229 ? 1_555 159.3 ? 67 O ? N HOH . ? M HOH 203 ? 1_555 ZN ? I ZN . ? M ZN 101 ? 1_555 O ? N HOH . ? M HOH 229 ? 1_555 87.2 ? 68 O ? N HOH . ? M HOH 204 ? 1_555 ZN ? I ZN . ? M ZN 101 ? 1_555 O ? N HOH . ? M HOH 229 ? 1_555 100.0 ? 69 O ? N HOH . ? M HOH 212 ? 1_555 ZN ? I ZN . ? M ZN 101 ? 1_555 O ? N HOH . ? M HOH 229 ? 1_555 79.3 ? 70 O ? N HOH . ? M HOH 221 ? 1_555 ZN ? I ZN . ? M ZN 101 ? 1_555 O ? N HOH . ? M HOH 229 ? 1_555 86.4 ? 71 O ? N HOH . ? M HOH 201 ? 1_555 ZN ? J ZN . ? M ZN 102 ? 1_555 O ? N HOH . ? M HOH 210 ? 1_555 88.7 ? 72 O ? N HOH . ? M HOH 201 ? 1_555 ZN ? J ZN . ? M ZN 102 ? 1_555 O ? N HOH . ? M HOH 216 ? 1_555 118.2 ? 73 O ? N HOH . ? M HOH 210 ? 1_555 ZN ? J ZN . ? M ZN 102 ? 1_555 O ? N HOH . ? M HOH 216 ? 1_555 150.8 ? 74 O ? N HOH . ? M HOH 201 ? 1_555 ZN ? J ZN . ? M ZN 102 ? 1_555 O ? N HOH . ? M HOH 230 ? 1_555 104.4 ? 75 O ? N HOH . ? M HOH 210 ? 1_555 ZN ? J ZN . ? M ZN 102 ? 1_555 O ? N HOH . ? M HOH 230 ? 1_555 85.7 ? 76 O ? N HOH . ? M HOH 216 ? 1_555 ZN ? J ZN . ? M ZN 102 ? 1_555 O ? N HOH . ? M HOH 230 ? 1_555 97.2 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 N7 N 0G 92 ? ? O N HOH 201 ? ? 1.91 2 1 O L HOH 206 ? ? O L HOH 209 ? ? 2.04 3 1 O K HOH 205 ? ? O K HOH 212 ? ? 2.05 4 1 N7 K G 85 ? ? O K HOH 201 ? ? 2.06 5 1 O6 M 0G 85 ? ? O M HOH 201 ? ? 2.13 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C5'" K C 79 ? ? "C4'" K C 79 ? ? "O4'" K C 79 ? ? 117.65 109.80 7.85 0.90 N 2 1 "O5'" K G 81 ? ? P K G 81 ? ? OP2 K G 81 ? ? 99.41 105.70 -6.29 0.90 N 3 1 "O5'" L G 92 ? ? P L G 92 ? ? OP2 L G 92 ? ? 100.30 105.70 -5.40 0.90 N # _pdbx_entry_details.entry_id 7A9S _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 0C OP3 O N N 1 0C P P N N 2 0C OP1 O N N 3 0C OP2 O N N 4 0C "O5'" O N N 5 0C "C5'" C N N 6 0C "C4'" C N S 7 0C "O4'" O N N 8 0C "C3'" C N R 9 0C "O3'" O N N 10 0C "C2'" C N S 11 0C "O2'" O N N 12 0C "C1'" C N S 13 0C N1 N N N 14 0C C2 C N N 15 0C O2 O N N 16 0C N3 N N N 17 0C C4 C N N 18 0C N4 N N N 19 0C C5 C N N 20 0C C6 C N N 21 0C HOP3 H N N 22 0C HOP2 H N N 23 0C "H5'" H N N 24 0C "H5''" H N N 25 0C "H4'" H N N 26 0C "H3'" H N N 27 0C "HO3'" H N N 28 0C "H2'" H N N 29 0C "HO2'" H N N 30 0C "H1'" H N N 31 0C H41 H N N 32 0C H42 H N N 33 0C H5 H N N 34 0C H6 H N N 35 0G OP3 O N N 36 0G P P N N 37 0G OP1 O N N 38 0G OP2 O N N 39 0G "O5'" O N N 40 0G "C5'" C N N 41 0G "C4'" C N S 42 0G "O4'" O N N 43 0G "C3'" C N R 44 0G "O3'" O N N 45 0G "C2'" C N S 46 0G "O2'" O N N 47 0G "C1'" C N S 48 0G N9 N Y N 49 0G C8 C Y N 50 0G N7 N Y N 51 0G C6 C N N 52 0G O6 O N N 53 0G C5 C Y N 54 0G N1 N N N 55 0G C2 C N N 56 0G N2 N N N 57 0G N3 N N N 58 0G C4 C Y N 59 0G HOP3 H N N 60 0G HOP2 H N N 61 0G "H5'" H N N 62 0G "H5''" H N N 63 0G "H4'" H N N 64 0G "H3'" H N N 65 0G "HO3'" H N N 66 0G "H2'" H N N 67 0G "HO2'" H N N 68 0G "H1'" H N N 69 0G H8 H N N 70 0G H1 H N N 71 0G H21 H N N 72 0G H22 H N N 73 0U OP3 O N N 74 0U P P N N 75 0U OP1 O N N 76 0U OP2 O N N 77 0U "O5'" O N N 78 0U "C5'" C N N 79 0U "C4'" C N S 80 0U "O4'" O N N 81 0U "C3'" C N R 82 0U "O3'" O N N 83 0U "C2'" C N S 84 0U "O2'" O N N 85 0U "C1'" C N S 86 0U N1 N N N 87 0U C2 C N N 88 0U O2 O N N 89 0U N3 N N N 90 0U C4 C N N 91 0U O4 O N N 92 0U C5 C N N 93 0U C6 C N N 94 0U HOP3 H N N 95 0U HOP2 H N N 96 0U "H5'" H N N 97 0U "H5''" H N N 98 0U "H4'" H N N 99 0U "H3'" H N N 100 0U "HO3'" H N N 101 0U "H2'" H N N 102 0U "HO2'" H N N 103 0U "H1'" H N N 104 0U H3 H N N 105 0U H5 H N N 106 0U H6 H N N 107 C OP3 O N N 108 C P P N N 109 C OP1 O N N 110 C OP2 O N N 111 C "O5'" O N N 112 C "C5'" C N N 113 C "C4'" C N R 114 C "O4'" O N N 115 C "C3'" C N S 116 C "O3'" O N N 117 C "C2'" C N R 118 C "O2'" O N N 119 C "C1'" C N R 120 C N1 N N N 121 C C2 C N N 122 C O2 O N N 123 C N3 N N N 124 C C4 C N N 125 C N4 N N N 126 C C5 C N N 127 C C6 C N N 128 C HOP3 H N N 129 C HOP2 H N N 130 C "H5'" H N N 131 C "H5''" H N N 132 C "H4'" H N N 133 C "H3'" H N N 134 C "HO3'" H N N 135 C "H2'" H N N 136 C "HO2'" H N N 137 C "H1'" H N N 138 C H41 H N N 139 C H42 H N N 140 C H5 H N N 141 C H6 H N N 142 G OP3 O N N 143 G P P N N 144 G OP1 O N N 145 G OP2 O N N 146 G "O5'" O N N 147 G "C5'" C N N 148 G "C4'" C N R 149 G "O4'" O N N 150 G "C3'" C N S 151 G "O3'" O N N 152 G "C2'" C N R 153 G "O2'" O N N 154 G "C1'" C N R 155 G N9 N Y N 156 G C8 C Y N 157 G N7 N Y N 158 G C5 C Y N 159 G C6 C N N 160 G O6 O N N 161 G N1 N N N 162 G C2 C N N 163 G N2 N N N 164 G N3 N N N 165 G C4 C Y N 166 G HOP3 H N N 167 G HOP2 H N N 168 G "H5'" H N N 169 G "H5''" H N N 170 G "H4'" H N N 171 G "H3'" H N N 172 G "HO3'" H N N 173 G "H2'" H N N 174 G "HO2'" H N N 175 G "H1'" H N N 176 G H8 H N N 177 G H1 H N N 178 G H21 H N N 179 G H22 H N N 180 HOH O O N N 181 HOH H1 H N N 182 HOH H2 H N N 183 U OP3 O N N 184 U P P N N 185 U OP1 O N N 186 U OP2 O N N 187 U "O5'" O N N 188 U "C5'" C N N 189 U "C4'" C N R 190 U "O4'" O N N 191 U "C3'" C N S 192 U "O3'" O N N 193 U "C2'" C N R 194 U "O2'" O N N 195 U "C1'" C N R 196 U N1 N N N 197 U C2 C N N 198 U O2 O N N 199 U N3 N N N 200 U C4 C N N 201 U O4 O N N 202 U C5 C N N 203 U C6 C N N 204 U HOP3 H N N 205 U HOP2 H N N 206 U "H5'" H N N 207 U "H5''" H N N 208 U "H4'" H N N 209 U "H3'" H N N 210 U "HO3'" H N N 211 U "H2'" H N N 212 U "HO2'" H N N 213 U "H1'" H N N 214 U H3 H N N 215 U H5 H N N 216 U H6 H N N 217 ZN ZN ZN N N 218 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0C OP3 P sing N N 1 0C OP3 HOP3 sing N N 2 0C P OP1 doub N N 3 0C P OP2 sing N N 4 0C P "O5'" sing N N 5 0C OP2 HOP2 sing N N 6 0C "O5'" "C5'" sing N N 7 0C "C5'" "C4'" sing N N 8 0C "C5'" "H5'" sing N N 9 0C "C5'" "H5''" sing N N 10 0C "C4'" "O4'" sing N N 11 0C "C4'" "C3'" sing N N 12 0C "C4'" "H4'" sing N N 13 0C "O4'" "C1'" sing N N 14 0C "C3'" "O3'" sing N N 15 0C "C3'" "C2'" sing N N 16 0C "C3'" "H3'" sing N N 17 0C "O3'" "HO3'" sing N N 18 0C "C2'" "O2'" sing N N 19 0C "C2'" "C1'" sing N N 20 0C "C2'" "H2'" sing N N 21 0C "O2'" "HO2'" sing N N 22 0C "C1'" N1 sing N N 23 0C "C1'" "H1'" sing N N 24 0C N1 C2 sing N N 25 0C N1 C6 sing N N 26 0C C2 O2 doub N N 27 0C C2 N3 sing N N 28 0C N3 C4 doub N N 29 0C C4 N4 sing N N 30 0C C4 C5 sing N N 31 0C N4 H41 sing N N 32 0C N4 H42 sing N N 33 0C C5 C6 doub N N 34 0C C5 H5 sing N N 35 0C C6 H6 sing N N 36 0G OP3 P sing N N 37 0G OP3 HOP3 sing N N 38 0G P OP1 doub N N 39 0G P OP2 sing N N 40 0G P "O5'" sing N N 41 0G OP2 HOP2 sing N N 42 0G "O5'" "C5'" sing N N 43 0G "C5'" "C4'" sing N N 44 0G "C5'" "H5'" sing N N 45 0G "C5'" "H5''" sing N N 46 0G "C4'" "O4'" sing N N 47 0G "C4'" "C3'" sing N N 48 0G "C4'" "H4'" sing N N 49 0G "O4'" "C1'" sing N N 50 0G "C3'" "O3'" sing N N 51 0G "C3'" "C2'" sing N N 52 0G "C3'" "H3'" sing N N 53 0G "O3'" "HO3'" sing N N 54 0G "C2'" "O2'" sing N N 55 0G "C2'" "C1'" sing N N 56 0G "C2'" "H2'" sing N N 57 0G "O2'" "HO2'" sing N N 58 0G "C1'" N9 sing N N 59 0G "C1'" "H1'" sing N N 60 0G N9 C8 sing Y N 61 0G N9 C4 sing Y N 62 0G C8 N7 doub Y N 63 0G C8 H8 sing N N 64 0G N7 C5 sing Y N 65 0G C6 O6 doub N N 66 0G C6 C5 sing N N 67 0G C6 N1 sing N N 68 0G C5 C4 doub Y N 69 0G N1 C2 sing N N 70 0G N1 H1 sing N N 71 0G C2 N2 sing N N 72 0G C2 N3 doub N N 73 0G N2 H21 sing N N 74 0G N2 H22 sing N N 75 0G N3 C4 sing N N 76 0U OP3 P sing N N 77 0U OP3 HOP3 sing N N 78 0U P OP1 doub N N 79 0U P OP2 sing N N 80 0U P "O5'" sing N N 81 0U OP2 HOP2 sing N N 82 0U "O5'" "C5'" sing N N 83 0U "C5'" "C4'" sing N N 84 0U "C5'" "H5'" sing N N 85 0U "C5'" "H5''" sing N N 86 0U "C4'" "O4'" sing N N 87 0U "C4'" "C3'" sing N N 88 0U "C4'" "H4'" sing N N 89 0U "O4'" "C1'" sing N N 90 0U "C3'" "O3'" sing N N 91 0U "C3'" "C2'" sing N N 92 0U "C3'" "H3'" sing N N 93 0U "O3'" "HO3'" sing N N 94 0U "C2'" "O2'" sing N N 95 0U "C2'" "C1'" sing N N 96 0U "C2'" "H2'" sing N N 97 0U "O2'" "HO2'" sing N N 98 0U "C1'" N1 sing N N 99 0U "C1'" "H1'" sing N N 100 0U N1 C2 sing N N 101 0U N1 C6 sing N N 102 0U C2 O2 doub N N 103 0U C2 N3 sing N N 104 0U N3 C4 sing N N 105 0U N3 H3 sing N N 106 0U C4 O4 doub N N 107 0U C4 C5 sing N N 108 0U C5 C6 doub N N 109 0U C5 H5 sing N N 110 0U C6 H6 sing N N 111 C OP3 P sing N N 112 C OP3 HOP3 sing N N 113 C P OP1 doub N N 114 C P OP2 sing N N 115 C P "O5'" sing N N 116 C OP2 HOP2 sing N N 117 C "O5'" "C5'" sing N N 118 C "C5'" "C4'" sing N N 119 C "C5'" "H5'" sing N N 120 C "C5'" "H5''" sing N N 121 C "C4'" "O4'" sing N N 122 C "C4'" "C3'" sing N N 123 C "C4'" "H4'" sing N N 124 C "O4'" "C1'" sing N N 125 C "C3'" "O3'" sing N N 126 C "C3'" "C2'" sing N N 127 C "C3'" "H3'" sing N N 128 C "O3'" "HO3'" sing N N 129 C "C2'" "O2'" sing N N 130 C "C2'" "C1'" sing N N 131 C "C2'" "H2'" sing N N 132 C "O2'" "HO2'" sing N N 133 C "C1'" N1 sing N N 134 C "C1'" "H1'" sing N N 135 C N1 C2 sing N N 136 C N1 C6 sing N N 137 C C2 O2 doub N N 138 C C2 N3 sing N N 139 C N3 C4 doub N N 140 C C4 N4 sing N N 141 C C4 C5 sing N N 142 C N4 H41 sing N N 143 C N4 H42 sing N N 144 C C5 C6 doub N N 145 C C5 H5 sing N N 146 C C6 H6 sing N N 147 G OP3 P sing N N 148 G OP3 HOP3 sing N N 149 G P OP1 doub N N 150 G P OP2 sing N N 151 G P "O5'" sing N N 152 G OP2 HOP2 sing N N 153 G "O5'" "C5'" sing N N 154 G "C5'" "C4'" sing N N 155 G "C5'" "H5'" sing N N 156 G "C5'" "H5''" sing N N 157 G "C4'" "O4'" sing N N 158 G "C4'" "C3'" sing N N 159 G "C4'" "H4'" sing N N 160 G "O4'" "C1'" sing N N 161 G "C3'" "O3'" sing N N 162 G "C3'" "C2'" sing N N 163 G "C3'" "H3'" sing N N 164 G "O3'" "HO3'" sing N N 165 G "C2'" "O2'" sing N N 166 G "C2'" "C1'" sing N N 167 G "C2'" "H2'" sing N N 168 G "O2'" "HO2'" sing N N 169 G "C1'" N9 sing N N 170 G "C1'" "H1'" sing N N 171 G N9 C8 sing Y N 172 G N9 C4 sing Y N 173 G C8 N7 doub Y N 174 G C8 H8 sing N N 175 G N7 C5 sing Y N 176 G C5 C6 sing N N 177 G C5 C4 doub Y N 178 G C6 O6 doub N N 179 G C6 N1 sing N N 180 G N1 C2 sing N N 181 G N1 H1 sing N N 182 G C2 N2 sing N N 183 G C2 N3 doub N N 184 G N2 H21 sing N N 185 G N2 H22 sing N N 186 G N3 C4 sing N N 187 HOH O H1 sing N N 188 HOH O H2 sing N N 189 U OP3 P sing N N 190 U OP3 HOP3 sing N N 191 U P OP1 doub N N 192 U P OP2 sing N N 193 U P "O5'" sing N N 194 U OP2 HOP2 sing N N 195 U "O5'" "C5'" sing N N 196 U "C5'" "C4'" sing N N 197 U "C5'" "H5'" sing N N 198 U "C5'" "H5''" sing N N 199 U "C4'" "O4'" sing N N 200 U "C4'" "C3'" sing N N 201 U "C4'" "H4'" sing N N 202 U "O4'" "C1'" sing N N 203 U "C3'" "O3'" sing N N 204 U "C3'" "C2'" sing N N 205 U "C3'" "H3'" sing N N 206 U "O3'" "HO3'" sing N N 207 U "C2'" "O2'" sing N N 208 U "C2'" "C1'" sing N N 209 U "C2'" "H2'" sing N N 210 U "O2'" "HO2'" sing N N 211 U "C1'" N1 sing N N 212 U "C1'" "H1'" sing N N 213 U N1 C2 sing N N 214 U N1 C6 sing N N 215 U C2 O2 doub N N 216 U C2 N3 sing N N 217 U N3 C4 sing N N 218 U N3 H3 sing N N 219 U C4 O4 doub N N 220 U C4 C5 sing N N 221 U C5 C6 doub N N 222 U C5 H5 sing N N 223 U C6 H6 sing N N 224 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 7A9S 'double helix' 7A9S 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A C 1 1_555 B G 8 1_555 0.107 -0.288 0.181 3.461 -9.090 -1.698 1 K_C79:G97_L K 79 ? L 97 ? 19 1 1 A U 2 1_555 B G 7 1_555 2.147 -0.658 0.194 6.941 -17.400 0.171 2 K_U80:G96_L K 80 ? L 96 ? 28 1 1 A G 3 1_555 B U 6 1_555 -2.242 -0.616 0.373 -3.229 -8.842 -4.239 3 K_G81:U95_L K 81 ? L 95 ? 28 1 1 A G 4 1_555 B C 5 1_555 0.004 -0.233 0.216 1.521 -12.701 -1.193 4 K_G82:C94_L K 82 ? L 94 ? 19 1 1 A G 5 1_555 B C 4 1_555 -0.025 -0.318 0.123 -7.796 -14.115 1.184 5 K_G83:C93_L K 83 ? L 93 ? 19 1 1 A C 6 1_555 B G 3 1_555 0.559 -0.226 0.343 -5.877 -13.772 4.055 6 K_C84:G92_L K 84 ? L 92 ? 19 1 1 A G 7 1_555 B C 2 1_555 -0.695 -0.452 0.010 -9.829 -16.897 -2.194 7 K_G85:C91_L K 85 ? L 91 ? 19 1 1 A G 8 1_555 B C 1 1_555 -0.112 -0.075 0.130 -8.666 -9.919 -3.849 8 K_G86:C90_L K 86 ? L 90 ? 19 1 1 C 0C 1 1_555 D 0G 8 1_555 -0.121 -0.246 -0.022 -1.999 4.382 -3.866 9 M_0C79:0G97_N M 79 ? N 97 ? 19 1 1 C 0U 2 1_555 D 0G 7 1_555 2.354 -0.663 0.233 -11.163 16.692 -1.456 10 M_0U80:0G96_N M 80 ? N 96 ? 28 1 1 C 0G 3 1_555 D 0U 6 1_555 -1.839 -0.463 -0.050 6.314 11.292 -3.401 11 M_0G81:0U95_N M 81 ? N 95 ? 28 1 1 C 0G 4 1_555 D 0C 5 1_555 0.282 -0.314 -0.461 -1.148 14.854 -1.160 12 M_0G82:0C94_N M 82 ? N 94 ? 19 1 1 C 0G 5 1_555 D 0C 4 1_555 0.126 -0.250 0.076 11.112 16.644 0.371 13 M_0G83:0C93_N M 83 ? N 93 ? 19 1 1 C 0C 6 1_555 D 0G 3 1_555 0.774 -0.122 -0.173 0.373 13.474 4.537 14 M_0C84:0G92_N M 84 ? N 92 ? 19 1 1 C 0G 7 1_555 D 0C 2 1_555 -0.969 -0.393 0.070 9.395 23.382 -0.001 15 M_0G85:0C91_N M 85 ? N 91 ? 19 1 1 C 0G 8 1_555 D 0C 1 1_555 -0.054 -0.200 -0.294 4.561 4.511 -2.679 16 M_0G86:0C90_N M 86 ? N 90 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A C 1 1_555 B G 8 1_555 A U 2 1_555 B G 7 1_555 0.005 -1.208 3.148 0.348 7.140 38.713 -2.583 0.032 2.889 10.660 -0.520 39.342 1 KK_C79U80:G96G97_LL K 79 ? L 97 ? K 80 ? L 96 ? 1 A U 2 1_555 B G 7 1_555 A G 3 1_555 B U 6 1_555 -0.829 -2.282 3.249 -4.971 9.867 18.927 -9.306 0.521 1.981 27.208 13.708 21.890 2 KK_U80G81:U95G96_LL K 80 ? L 96 ? K 81 ? L 95 ? 1 A G 3 1_555 B U 6 1_555 A G 4 1_555 B C 5 1_555 0.018 -1.243 3.223 1.127 3.728 38.481 -2.320 0.106 3.093 5.639 -1.705 38.670 3 KK_G81G82:C94U95_LL K 81 ? L 95 ? K 82 ? L 94 ? 1 A G 4 1_555 B C 5 1_555 A G 5 1_555 B C 4 1_555 0.022 -1.368 3.387 0.899 8.426 36.890 -3.186 0.081 3.013 13.103 -1.398 37.818 4 KK_G82G83:C93C94_LL K 82 ? L 94 ? K 83 ? L 93 ? 1 A G 5 1_555 B C 4 1_555 A C 6 1_555 B G 3 1_555 0.399 -1.210 3.206 -1.254 3.665 32.725 -2.731 -0.908 3.039 6.477 2.216 32.947 5 KK_G83C84:G92C93_LL K 83 ? L 93 ? K 84 ? L 92 ? 1 A C 6 1_555 B G 3 1_555 A G 7 1_555 B C 2 1_555 0.013 -1.617 3.228 3.206 10.802 30.176 -4.668 0.496 2.504 19.897 -5.905 32.165 6 KK_C84G85:C91G92_LL K 84 ? L 92 ? K 85 ? L 91 ? 1 A G 7 1_555 B C 2 1_555 A G 8 1_555 B C 1 1_555 0.086 -1.397 3.192 0.322 8.655 33.744 -3.555 -0.098 2.761 14.612 -0.543 34.806 7 KK_G85G86:C90C91_LL K 85 ? L 91 ? K 86 ? L 90 ? 1 A G 8 1_555 B C 1 1_555 C 0C 1 1_555 D 0G 8 1_555 -3.184 -0.890 0.080 2.175 179.030 -65.073 0.197 -1.589 0.826 -89.736 1.090 -179.194 8 KM_G860C79:0G97C90_NL K 86 ? L 90 ? M 79 ? N 97 ? 1 C 0C 1 1_555 D 0G 8 1_555 C 0U 2 1_555 D 0G 7 1_555 -0.028 -1.216 -3.152 -2.150 -6.186 39.447 -2.445 0.272 -2.930 -9.088 3.159 39.966 9 MM_0C790U80:0G960G97_NN M 79 ? N 97 ? M 80 ? N 96 ? 1 C 0U 2 1_555 D 0G 7 1_555 C 0G 3 1_555 D 0U 6 1_555 -0.565 -2.118 -3.349 3.800 -16.726 19.716 -8.398 0.411 -1.278 -40.347 -9.166 26.077 10 MM_0U800G81:0U950G96_NN M 80 ? N 96 ? M 81 ? N 95 ? 1 C 0G 3 1_555 D 0U 6 1_555 C 0G 4 1_555 D 0C 5 1_555 -0.129 -1.185 -3.186 2.108 -1.398 38.092 -1.983 -0.061 -3.145 -2.139 -3.226 38.173 11 MM_0G810G82:0C940U95_NN M 81 ? N 95 ? M 82 ? N 94 ? 1 C 0G 4 1_555 D 0C 5 1_555 C 0G 5 1_555 D 0C 4 1_555 -0.140 -1.220 -3.578 -3.854 -7.927 36.108 -3.031 0.762 -3.217 -12.559 6.106 37.133 12 MM_0G820G83:0C930C94_NN M 82 ? N 94 ? M 83 ? N 93 ? 1 C 0G 5 1_555 D 0C 4 1_555 C 0C 6 1_555 D 0G 3 1_555 0.639 -0.973 -2.973 0.890 -4.045 32.462 -2.348 -1.271 -2.817 -7.199 -1.585 32.718 13 MM_0G830C84:0G920C93_NN M 83 ? N 93 ? M 84 ? N 92 ? 1 C 0C 6 1_555 D 0G 3 1_555 C 0G 7 1_555 D 0C 2 1_555 0.076 -1.587 -3.428 -3.816 -12.733 28.981 -5.114 0.526 -2.516 -23.919 7.169 31.824 14 MM_0C840G85:0C910G92_NN M 84 ? N 92 ? M 85 ? N 91 ? 1 C 0G 7 1_555 D 0C 2 1_555 C 0G 8 1_555 D 0C 1 1_555 -0.008 -1.177 -2.988 2.262 -8.740 35.271 -2.948 -0.262 -2.627 -14.140 -3.659 36.373 15 MM_0G850G86:0C900C91_NN M 85 ? N 91 ? M 86 ? N 90 ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6ZQ9 _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 7A9S _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.047185 _atom_sites.fract_transf_matrix[1][2] 0.000928 _atom_sites.fract_transf_matrix[1][3] 0.006730 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.037974 _atom_sites.fract_transf_matrix[2][3] 0.010414 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.026869 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.pdbx_scat_Z _atom_type.pdbx_N_electrons _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c C 6 6 2.310 20.844 1.020 10.208 1.589 0.569 0.865 51.651 0.216 H 1 1 0.493 10.511 0.323 26.126 0.140 3.142 0.041 57.800 0.003 N 7 7 12.222 0.006 3.135 9.893 2.014 28.997 1.167 0.583 -11.538 O 8 8 3.049 13.277 2.287 5.701 1.546 0.324 0.867 32.909 0.251 P 15 15 6.435 1.907 4.179 27.157 1.780 0.526 1.491 68.164 1.115 ZN ? ? ? ? ? ? ? ? ? ? ? ZN+2 30 28 11.972 2.995 7.386 0.203 6.467 7.083 1.394 18.099 0.781 # loop_