HEADER LYASE 08-SEP-20 7ABS TITLE STRUCTURE OF HUMAN DCLRE1C/ARTEMIS IN COMPLEX WITH DNA - RE-EVALUATION TITLE 2 OF 6WO0 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN ARTEMIS; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DNA CROSS-LINK REPAIR 1C PROTEIN,PROTEIN A-SCID,SNM1 HOMOLOG COMPND 5 C,HSNM1C,SNM1-LIKE PROTEIN; COMPND 6 EC: 3.1.-.-; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA (5'-D(P*GP*CP*GP*AP*TP*CP*AP*GP*CP*T)-3'); COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: DNA (5'-D(*CP*AP*GP*C)-3'); COMPND 14 CHAIN: E; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DCLRE1C, ARTEMIS, ASCID, SCIDA, SNM1C; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 15 ORGANISM_TAXID: 9606 KEYWDS ARTEMIS, NHEJ, NUCLEASE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR J.A.NEWMAN,Y.YOSAATMADJA,F.VON DELFT,C.H.ARROWSMITH,A.EDWARDS, AUTHOR 2 C.BOUNTRA,O.GILEADI REVDAT 5 31-JAN-24 7ABS 1 REMARK REVDAT 4 29-SEP-21 7ABS 1 JRNL REVDAT 3 25-AUG-21 7ABS 1 JRNL REVDAT 2 11-AUG-21 7ABS 1 REMARK REVDAT 1 04-AUG-21 7ABS 0 JRNL AUTH Y.YOSAATMADJA,H.T.BADDOCK,J.A.NEWMAN,M.BIELINSKI,A.E.GAVARD, JRNL AUTH 2 S.M.M.MUKHOPADHYAY,A.A.DANNERFJORD,C.J.SCHOFIELD,P.J.MCHUGH, JRNL AUTH 3 O.GILEADI JRNL TITL STRUCTURAL AND MECHANISTIC INSIGHTS INTO THE ARTEMIS JRNL TITL 2 ENDONUCLEASE AND STRATEGIES FOR ITS INHIBITION. JRNL REF NUCLEIC ACIDS RES. V. 49 9310 2021 JRNL REFN ESSN 1362-4962 JRNL PMID 34387696 JRNL DOI 10.1093/NAR/GKAB693 REMARK 2 REMARK 2 RESOLUTION. 1.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.54 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 30565 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.218 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1560 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.97 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.02 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2189 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.57 REMARK 3 BIN R VALUE (WORKING SET) : 0.4070 REMARK 3 BIN FREE R VALUE SET COUNT : 118 REMARK 3 BIN FREE R VALUE : 0.3710 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2911 REMARK 3 NUCLEIC ACID ATOMS : 253 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 105 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 5.95000 REMARK 3 B22 (A**2) : -2.90000 REMARK 3 B33 (A**2) : -3.05000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.187 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.181 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.187 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.358 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.908 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3280 ; 0.010 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 2911 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4496 ; 1.586 ; 1.603 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6758 ; 1.291 ; 1.637 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 362 ; 7.837 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 163 ;31.261 ;20.429 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 526 ;15.010 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;17.782 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 423 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3461 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 741 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1439 ; 4.777 ; 5.268 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1438 ; 4.757 ; 5.264 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1798 ; 6.273 ; 7.888 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1799 ; 6.278 ; 7.891 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1841 ; 5.775 ; 5.983 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1837 ; 5.778 ; 5.984 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2694 ; 8.156 ; 8.755 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3637 ;10.267 ;59.852 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3638 ;10.265 ;59.844 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 7ABS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-SEP-20. REMARK 100 THE DEPOSITION ID IS D_1292111144. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-MAR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : M REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32168 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.970 REMARK 200 RESOLUTION RANGE LOW (A) : 35.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.82800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6WO0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM MES PH 6.5, 0.1 M LICL, 0.01 M REMARK 280 MGCL2, 12% PEG 4000 (W/V), VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 300K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 36.34500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 55.50500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.34500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 55.50500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 2 REMARK 465 SER A 362 REMARK 465 GLN A 363 REMARK 465 SER A 364 REMARK 465 THR A 365 REMARK 465 GLU A 366 REMARK 465 PRO A 367 REMARK 465 LYS A 368 REMARK 465 LYS A 369 REMARK 465 GLY A 370 REMARK 465 GLU A 371 REMARK 465 ASN A 372 REMARK 465 LEU A 373 REMARK 465 TYR A 374 REMARK 465 PHE A 375 REMARK 465 GLN A 376 REMARK 465 DC E -2 REMARK 465 DA E -1 REMARK 465 DT E 4 REMARK 465 DG E 5 REMARK 465 DA E 6 REMARK 465 DT E 7 REMARK 465 DC E 8 REMARK 465 DG E 9 REMARK 465 DC E 10 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DC E 0 P OP1 OP2 O5' C5' C4' O4' REMARK 470 DC E 0 C3' C2' C1' N1 C2 O2 N3 REMARK 470 DC E 0 C4 N4 C5 C6 REMARK 470 DC E 3 C5' C4' O4' C3' O3' C2' C1' REMARK 470 DC E 3 N1 C2 O2 N3 C4 N4 C5 REMARK 470 DC E 3 C6 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 309 O HOH A 501 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 21 -127.11 49.91 REMARK 500 PHE A 173 45.71 -90.31 REMARK 500 ARG A 297 108.01 -47.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 33 NE2 REMARK 620 2 HIS A 35 ND1 92.6 REMARK 620 3 HIS A 115 NE2 93.1 91.2 REMARK 620 4 ASP A 136 OD2 95.0 170.1 94.7 REMARK 620 5 DA E 1 OP1 176.1 91.3 87.2 81.1 REMARK 620 6 HOH E 202 O 99.1 94.7 166.2 77.9 80.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 228 ND1 REMARK 620 2 HIS A 254 ND1 97.0 REMARK 620 3 CYS A 256 SG 114.6 114.6 REMARK 620 4 CYS A 272 SG 110.4 110.1 109.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN E 101 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 540 O REMARK 620 2 DA E 1 OP2 175.9 REMARK 620 N 1 DBREF 7ABS A 2 368 UNP Q96SD1 DCR1C_HUMAN 2 368 DBREF 7ABS B -2 7 PDB 7ABS 7ABS -2 7 DBREF 7ABS E -2 10 PDB 7ABS 7ABS -2 10 SEQADV 7ABS LYS A 369 UNP Q96SD1 EXPRESSION TAG SEQADV 7ABS GLY A 370 UNP Q96SD1 EXPRESSION TAG SEQADV 7ABS GLU A 371 UNP Q96SD1 EXPRESSION TAG SEQADV 7ABS ASN A 372 UNP Q96SD1 EXPRESSION TAG SEQADV 7ABS LEU A 373 UNP Q96SD1 EXPRESSION TAG SEQADV 7ABS TYR A 374 UNP Q96SD1 EXPRESSION TAG SEQADV 7ABS PHE A 375 UNP Q96SD1 EXPRESSION TAG SEQADV 7ABS GLN A 376 UNP Q96SD1 EXPRESSION TAG SEQRES 1 A 375 SER SER PHE GLU GLY GLN MET ALA GLU TYR PRO THR ILE SEQRES 2 A 375 SER ILE ASP ARG PHE ASP ARG GLU ASN LEU ARG ALA ARG SEQRES 3 A 375 ALA TYR PHE LEU SER HIS CYS HIS LYS ASP HIS MET LYS SEQRES 4 A 375 GLY LEU ARG ALA PRO THR LEU LYS ARG ARG LEU GLU CYS SEQRES 5 A 375 SER LEU LYS VAL TYR LEU TYR CYS SER PRO VAL THR LYS SEQRES 6 A 375 GLU LEU LEU LEU THR SER PRO LYS TYR ARG PHE TRP LYS SEQRES 7 A 375 LYS ARG ILE ILE SER ILE GLU ILE GLU THR PRO THR GLN SEQRES 8 A 375 ILE SER LEU VAL ASP GLU ALA SER GLY GLU LYS GLU GLU SEQRES 9 A 375 ILE VAL VAL THR LEU LEU PRO ALA GLY HIS CYS PRO GLY SEQRES 10 A 375 SER VAL MET PHE LEU PHE GLN GLY ASN ASN GLY THR VAL SEQRES 11 A 375 LEU TYR THR GLY ASP PHE ARG LEU ALA GLN GLY GLU ALA SEQRES 12 A 375 ALA ARG MET GLU LEU LEU HIS SER GLY GLY ARG VAL LYS SEQRES 13 A 375 ASP ILE GLN SER VAL TYR LEU ASP THR THR PHE CYS ASP SEQRES 14 A 375 PRO ARG PHE TYR GLN ILE PRO SER ARG GLU GLU CYS LEU SEQRES 15 A 375 SER GLY VAL LEU GLU LEU VAL ARG SER TRP ILE THR ARG SEQRES 16 A 375 SER PRO TYR HIS VAL VAL TRP LEU ASN CYS LYS ALA ALA SEQRES 17 A 375 TYR GLY TYR GLU TYR LEU PHE THR ASN LEU SER GLU GLU SEQRES 18 A 375 LEU GLY VAL GLN VAL HIS VAL ASN LYS LEU ASP MET PHE SEQRES 19 A 375 ARG ASN MET PRO GLU ILE LEU HIS HIS LEU THR THR ASP SEQRES 20 A 375 ARG ASN THR GLN ILE HIS ALA CYS ARG HIS PRO LYS ALA SEQRES 21 A 375 GLU GLU TYR PHE GLN TRP SER LYS LEU PRO CYS GLY ILE SEQRES 22 A 375 THR SER ARG ASN ARG ILE PRO LEU HIS ILE ILE SER ILE SEQRES 23 A 375 LYS PRO SER THR MET TRP PHE GLY GLU ARG SER ARG LYS SEQRES 24 A 375 THR ASN VAL ILE VAL ARG THR GLY GLU SER SER TYR ARG SEQRES 25 A 375 ALA CYS PHE SER PHE HIS SER SER TYR SER GLU ILE LYS SEQRES 26 A 375 ASP PHE LEU SER TYR LEU CYS PRO VAL ASN ALA TYR PRO SEQRES 27 A 375 ASN VAL ILE PRO VAL GLY THR THR MET ASP LYS VAL VAL SEQRES 28 A 375 GLU ILE LEU LYS PRO LEU CYS ARG SER SER GLN SER THR SEQRES 29 A 375 GLU PRO LYS LYS GLY GLU ASN LEU TYR PHE GLN SEQRES 1 B 10 DG DC DG DA DT DC DA DG DC DT SEQRES 1 E 13 DC DA DC DA DG DC DT DG DA DT DC DG DC HET ZN A 401 1 HET ZN A 402 1 HET ZN E 101 1 HETNAM ZN ZINC ION FORMUL 4 ZN 3(ZN 2+) FORMUL 7 HOH *105(H2 O) HELIX 1 AA1 ASP A 20 ALA A 26 5 7 HELIX 2 AA2 HIS A 35 MET A 39 5 5 HELIX 3 AA3 ALA A 44 SER A 54 1 11 HELIX 4 AA4 SER A 62 LEU A 70 1 9 HELIX 5 AA5 SER A 72 LYS A 79 5 8 HELIX 6 AA6 GLU A 143 LEU A 149 5 7 HELIX 7 AA7 ASP A 170 TYR A 174 5 5 HELIX 8 AA8 SER A 178 THR A 195 1 18 HELIX 9 AA9 TYR A 212 GLY A 224 1 13 HELIX 10 AB1 LEU A 232 ARG A 236 5 5 HELIX 11 AB2 MET A 238 HIS A 243 1 6 HELIX 12 AB3 LYS A 260 TRP A 267 1 8 HELIX 13 AB4 SER A 321 CYS A 333 1 13 HELIX 14 AB5 THR A 347 LYS A 356 1 10 HELIX 15 AB6 PRO A 357 CYS A 359 5 3 SHEET 1 AA1 4 ILE A 14 ILE A 16 0 SHEET 2 AA1 4 ALA A 28 PHE A 30 1 O ALA A 28 N SER A 15 SHEET 3 AA1 4 LEU A 59 CYS A 61 1 O TYR A 60 N TYR A 29 SHEET 4 AA1 4 ILE A 82 SER A 84 1 O ILE A 83 N LEU A 59 SHEET 1 AA2 6 THR A 91 VAL A 96 0 SHEET 2 AA2 6 LYS A 103 PRO A 112 -1 O GLU A 104 N LEU A 95 SHEET 3 AA2 6 VAL A 120 GLY A 126 -1 O GLN A 125 N VAL A 107 SHEET 4 AA2 6 GLY A 129 TYR A 133 -1 O VAL A 131 N PHE A 124 SHEET 5 AA2 6 SER A 161 LEU A 164 1 O TYR A 163 N LEU A 132 SHEET 6 AA2 6 ASN A 336 PRO A 339 1 O TYR A 338 N VAL A 162 SHEET 1 AA3 2 HIS A 151 SER A 152 0 SHEET 2 AA3 2 ARG A 155 VAL A 156 -1 O ARG A 155 N SER A 152 SHEET 1 AA4 7 LEU A 245 THR A 246 0 SHEET 2 AA4 7 VAL A 227 HIS A 228 1 N VAL A 227 O THR A 246 SHEET 3 AA4 7 ILE A 253 HIS A 254 1 O ILE A 253 N HIS A 228 SHEET 4 AA4 7 HIS A 200 LEU A 204 1 N LEU A 204 O HIS A 254 SHEET 5 AA4 7 HIS A 283 PRO A 289 1 O HIS A 283 N VAL A 201 SHEET 6 AA4 7 SER A 311 ALA A 314 1 O TYR A 312 N SER A 286 SHEET 7 AA4 7 ILE A 304 GLY A 308 -1 N THR A 307 O SER A 311 SHEET 1 AA5 2 SER A 276 ARG A 277 0 SHEET 2 AA5 2 ILE A 280 PRO A 281 -1 O ILE A 280 N ARG A 277 LINK NE2 HIS A 33 ZN ZN A 402 1555 1555 2.11 LINK ND1 HIS A 35 ZN ZN A 402 1555 1555 2.26 LINK NE2 HIS A 115 ZN ZN A 402 1555 1555 2.20 LINK OD2 ASP A 136 ZN ZN A 402 1555 1555 2.20 LINK ND1 HIS A 228 ZN ZN A 401 1555 1555 2.03 LINK ND1 HIS A 254 ZN ZN A 401 1555 1555 2.03 LINK SG CYS A 256 ZN ZN A 401 1555 1555 2.31 LINK SG CYS A 272 ZN ZN A 401 1555 1555 2.35 LINK ZN ZN A 402 OP1 DA E 1 1555 1555 2.15 LINK ZN ZN A 402 O HOH E 202 1555 1555 2.39 LINK O HOH A 540 ZN ZN E 101 1555 1555 2.28 LINK OP2 DA E 1 ZN ZN E 101 1555 1555 2.20 CRYST1 72.690 111.010 55.160 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013757 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009008 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018129 0.00000