HEADER SIGNALING PROTEIN 08-SEP-20 7ABV TITLE STRUCTURE OF THE S1-CLEAVED MOUSE NOTCH1 NEGATIVE REGULATORY REGION TITLE 2 (NRR) COMPND MOL_ID: 1; COMPND 2 MOLECULE: NEUROGENIC LOCUS NOTCH HOMOLOG PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: NOTCH 1,MOTCH A,MT14,P300; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: NOTCH1, MOTCH; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS SIGNALING PROTEIN, TYPE I TRANSMEMBRANE PROTEIN, DEVELOPMENTAL KEYWDS 2 PROTEIN, CALCIUM BINDING EXPDTA X-RAY DIFFRACTION AUTHOR M.R.ZERONIAN,B.J.C.JANSSEN REVDAT 3 31-JAN-24 7ABV 1 REMARK REVDAT 2 04-AUG-21 7ABV 1 JRNL REVDAT 1 07-JUL-21 7ABV 0 JRNL AUTH M.R.ZERONIAN,O.KLYKOV,J.PORTELL I DE MONTSERRAT, JRNL AUTH 2 M.J.KONIJNENBERG,A.GAUR,R.A.SCHELTEMA,B.J.C.JANSSEN JRNL TITL NOTCH-JAGGED SIGNALING COMPLEX DEFINED BY AN INTERACTION JRNL TITL 2 MOSAIC. JRNL REF PROC.NATL.ACAD.SCI.USA V. 118 2021 JRNL REFN ESSN 1091-6490 JRNL PMID 34301900 JRNL DOI 10.1073/PNAS.2102502118 REMARK 2 REMARK 2 RESOLUTION. 2.07 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0266 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.07 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 60.89 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 66.9 REMARK 3 NUMBER OF REFLECTIONS : 15143 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.250 REMARK 3 FREE R VALUE TEST SET COUNT : 795 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.07 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.12 REMARK 3 REFLECTION IN BIN (WORKING SET) : 94 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 5.96 REMARK 3 BIN R VALUE (WORKING SET) : 0.3060 REMARK 3 BIN FREE R VALUE SET COUNT : 4 REMARK 3 BIN FREE R VALUE : 0.1990 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1796 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 31 REMARK 3 SOLVENT ATOMS : 77 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.59700 REMARK 3 B22 (A**2) : -0.59700 REMARK 3 B33 (A**2) : 1.19400 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.251 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.208 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.932 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1877 ; 0.006 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2557 ; 1.501 ; 1.643 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 230 ; 7.389 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 105 ;38.740 ;24.857 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 283 ;15.268 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;28.636 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 234 ; 0.104 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1483 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 889 ; 0.235 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1305 ; 0.317 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 106 ; 0.142 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 11 ; 0.129 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 926 ; 1.623 ; 3.144 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1154 ; 2.720 ; 4.706 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 948 ; 2.196 ; 3.424 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1400 ; 3.461 ; 5.058 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 5 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : AA 1448 AA 1717 REMARK 3 RESIDUE RANGE : aA 3001 aA 3001 REMARK 3 RESIDUE RANGE : bA 3002 bA 3002 REMARK 3 RESIDUE RANGE : cA 3003 cA 3003 REMARK 3 RESIDUE RANGE : dA 3004 dA 3004 REMARK 3 ORIGIN FOR THE GROUP (A): 1.9000 17.6190 -21.4050 REMARK 3 T TENSOR REMARK 3 T11: 0.3832 T22: 0.0562 REMARK 3 T33: 0.0636 T12: -0.0061 REMARK 3 T13: 0.0541 T23: -0.0428 REMARK 3 L TENSOR REMARK 3 L11: 2.7443 L22: 2.6715 REMARK 3 L33: 2.3221 L12: 0.9533 REMARK 3 L13: -1.3979 L23: -1.3213 REMARK 3 S TENSOR REMARK 3 S11: -0.1845 S12: 0.2390 S13: -0.3285 REMARK 3 S21: -0.7653 S22: 0.1718 S23: -0.1435 REMARK 3 S31: 0.3315 S32: -0.0202 S33: 0.0127 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7ABV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-SEP-20. REMARK 100 THE DEPOSITION ID IS D_1292111040. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-FEB-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.06998 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : STARANISO, AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15144 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.065 REMARK 200 RESOLUTION RANGE LOW (A) : 60.886 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.5 REMARK 200 DATA REDUNDANCY : 12.90 REMARK 200 R MERGE (I) : 0.10500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.07 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 64.6 REMARK 200 DATA REDUNDANCY IN SHELL : 11.80 REMARK 200 R MERGE FOR SHELL (I) : 1.43100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3ETO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0 M SODIUM CHLORIDE, 0.1 M SODIUM REMARK 280 ACETATE PH 4.6, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 32.86200 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 32.86200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 80.84150 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 32.86200 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 32.86200 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 80.84150 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 32.86200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 32.86200 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 80.84150 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 32.86200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 32.86200 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 80.84150 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A3176 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1444 REMARK 465 SER A 1445 REMARK 465 GLU A 1446 REMARK 465 GLU A 1447 REMARK 465 HIS A 1622 REMARK 465 GLU A 1623 REMARK 465 GLU A 1624 REMARK 465 GLU A 1625 REMARK 465 LEU A 1626 REMARK 465 ARG A 1627 REMARK 465 LYS A 1628 REMARK 465 HIS A 1629 REMARK 465 PRO A 1630 REMARK 465 ILE A 1631 REMARK 465 LYS A 1632 REMARK 465 ARG A 1633 REMARK 465 SER A 1634 REMARK 465 THR A 1635 REMARK 465 VAL A 1636 REMARK 465 GLY A 1637 REMARK 465 TRP A 1638 REMARK 465 ALA A 1639 REMARK 465 THR A 1640 REMARK 465 SER A 1641 REMARK 465 SER A 1642 REMARK 465 LEU A 1643 REMARK 465 LEU A 1644 REMARK 465 PRO A 1645 REMARK 465 GLY A 1646 REMARK 465 THR A 1647 REMARK 465 SER A 1648 REMARK 465 GLY A 1649 REMARK 465 GLY A 1650 REMARK 465 ARG A 1651 REMARK 465 GLN A 1652 REMARK 465 ARG A 1653 REMARK 465 ARG A 1654 REMARK 465 GLU A 1655 REMARK 465 LEU A 1656 REMARK 465 ASP A 1657 REMARK 465 PRO A 1658 REMARK 465 MET A 1659 REMARK 465 ALA A 1718 REMARK 465 ALA A 1719 REMARK 465 ALA A 1720 REMARK 465 HIS A 1721 REMARK 465 HIS A 1722 REMARK 465 HIS A 1723 REMARK 465 HIS A 1724 REMARK 465 HIS A 1725 REMARK 465 HIS A 1726 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A1451 118.37 -37.83 REMARK 500 ASP A1485 67.88 62.96 REMARK 500 GLU A1525 139.97 -35.50 REMARK 500 LEU A1559 7.06 81.41 REMARK 500 GLN A1681 59.88 -100.58 REMARK 500 PRO A1705 27.25 -67.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A3003 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A1457 O REMARK 620 2 ASN A1460 OD1 74.3 REMARK 620 3 VAL A1462 O 152.6 84.8 REMARK 620 4 ASN A1464 OD1 101.6 103.3 100.4 REMARK 620 5 ASP A1475 OD2 116.4 161.1 79.7 90.1 REMARK 620 6 ASP A1478 OD2 81.2 81.4 78.2 175.0 85.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A3002 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A1499 O REMARK 620 2 ASP A1502 OD1 78.5 REMARK 620 3 HIS A1504 O 158.6 80.1 REMARK 620 4 ASP A1506 OD2 99.4 98.3 83.8 REMARK 620 5 ASP A1517 OD1 72.6 149.5 128.4 95.9 REMARK 620 6 ASP A1517 OD2 122.0 155.7 78.8 91.3 49.6 REMARK 620 7 ASP A1520 OD2 90.6 75.5 83.9 166.9 95.0 90.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A3001 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A1539 O REMARK 620 2 ASP A1542 OD1 73.9 REMARK 620 3 HIS A1544 O 148.3 76.5 REMARK 620 4 ASP A1546 OD2 99.2 101.6 75.7 REMARK 620 5 ASP A1557 OD1 73.8 145.6 137.2 95.0 REMARK 620 6 ASP A1557 OD2 125.3 152.0 86.4 95.4 52.4 REMARK 620 7 ASP A1560 OD2 87.9 71.7 93.6 168.6 95.5 87.6 REMARK 620 N 1 2 3 4 5 6 DBREF 7ABV A 1446 1717 UNP Q01705 NOTC1_MOUSE 1446 1717 SEQADV 7ABV GLY A 1444 UNP Q01705 CLONING ARTIFACT SEQADV 7ABV SER A 1445 UNP Q01705 CLONING ARTIFACT SEQADV 7ABV ALA A 1718 UNP Q01705 CLONING ARTIFACT SEQADV 7ABV ALA A 1719 UNP Q01705 CLONING ARTIFACT SEQADV 7ABV ALA A 1720 UNP Q01705 CLONING ARTIFACT SEQADV 7ABV HIS A 1721 UNP Q01705 EXPRESSION TAG SEQADV 7ABV HIS A 1722 UNP Q01705 EXPRESSION TAG SEQADV 7ABV HIS A 1723 UNP Q01705 EXPRESSION TAG SEQADV 7ABV HIS A 1724 UNP Q01705 EXPRESSION TAG SEQADV 7ABV HIS A 1725 UNP Q01705 EXPRESSION TAG SEQADV 7ABV HIS A 1726 UNP Q01705 EXPRESSION TAG SEQRES 1 A 283 GLY SER GLU GLU ALA CYS GLU LEU PRO GLU CYS GLN VAL SEQRES 2 A 283 ASP ALA GLY ASN LYS VAL CYS ASN LEU GLN CYS ASN ASN SEQRES 3 A 283 HIS ALA CYS GLY TRP ASP GLY GLY ASP CYS SER LEU ASN SEQRES 4 A 283 PHE ASN ASP PRO TRP LYS ASN CYS THR GLN SER LEU GLN SEQRES 5 A 283 CYS TRP LYS TYR PHE SER ASP GLY HIS CYS ASP SER GLN SEQRES 6 A 283 CYS ASN SER ALA GLY CYS LEU PHE ASP GLY PHE ASP CYS SEQRES 7 A 283 GLN LEU THR GLU GLY GLN CYS ASN PRO LEU TYR ASP GLN SEQRES 8 A 283 TYR CYS LYS ASP HIS PHE SER ASP GLY HIS CYS ASP GLN SEQRES 9 A 283 GLY CYS ASN SER ALA GLU CYS GLU TRP ASP GLY LEU ASP SEQRES 10 A 283 CYS ALA GLU HIS VAL PRO GLU ARG LEU ALA ALA GLY THR SEQRES 11 A 283 LEU VAL LEU VAL VAL LEU LEU PRO PRO ASP GLN LEU ARG SEQRES 12 A 283 ASN ASN SER PHE HIS PHE LEU ARG GLU LEU SER HIS VAL SEQRES 13 A 283 LEU HIS THR ASN VAL VAL PHE LYS ARG ASP ALA GLN GLY SEQRES 14 A 283 GLN GLN MET ILE PHE PRO TYR TYR GLY HIS GLU GLU GLU SEQRES 15 A 283 LEU ARG LYS HIS PRO ILE LYS ARG SER THR VAL GLY TRP SEQRES 16 A 283 ALA THR SER SER LEU LEU PRO GLY THR SER GLY GLY ARG SEQRES 17 A 283 GLN ARG ARG GLU LEU ASP PRO MET ASP ILE ARG GLY SER SEQRES 18 A 283 ILE VAL TYR LEU GLU ILE ASP ASN ARG GLN CYS VAL GLN SEQRES 19 A 283 SER SER SER GLN CYS PHE GLN SER ALA THR ASP VAL ALA SEQRES 20 A 283 ALA PHE LEU GLY ALA LEU ALA SER LEU GLY SER LEU ASN SEQRES 21 A 283 ILE PRO TYR LYS ILE GLU ALA VAL LYS SER GLU PRO VAL SEQRES 22 A 283 GLU ALA ALA ALA HIS HIS HIS HIS HIS HIS HET CA A3001 1 HET CA A3002 1 HET CA A3003 1 HET NAG A3004 14 HET NAG A3005 14 HETNAM CA CALCIUM ION HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 2 CA 3(CA 2+) FORMUL 5 NAG 2(C8 H15 N O6) FORMUL 7 HOH *77(H2 O) HELIX 1 AA1 PRO A 1452 ALA A 1458 1 7 HELIX 2 AA2 ASN A 1464 ASN A 1468 5 5 HELIX 3 AA3 CYS A 1472 GLY A 1477 1 6 HELIX 4 AA4 THR A 1491 TYR A 1499 5 9 HELIX 5 AA5 ASP A 1506 ASN A 1510 5 5 HELIX 6 AA6 SER A 1511 ASP A 1520 5 10 HELIX 7 AA7 ASN A 1529 PHE A 1540 1 12 HELIX 8 AA8 ASP A 1546 ASN A 1550 5 5 HELIX 9 AA9 SER A 1551 ASP A 1560 5 10 HELIX 10 AB1 PRO A 1581 ASN A 1588 1 8 HELIX 11 AB2 ASN A 1588 HIS A 1601 1 14 HELIX 12 AB3 GLN A 1674 SER A 1679 1 6 HELIX 13 AB4 SER A 1685 LEU A 1699 1 15 SHEET 1 AA1 3 ASN A1603 PHE A1606 0 SHEET 2 AA1 3 GLY A1663 ASP A1671 -1 O ASP A1671 N ASN A1603 SHEET 3 AA1 3 ILE A1616 TYR A1619 -1 N PHE A1617 O ILE A1665 SHEET 1 AA2 4 ASN A1603 PHE A1606 0 SHEET 2 AA2 4 GLY A1663 ASP A1671 -1 O ASP A1671 N ASN A1603 SHEET 3 AA2 4 THR A1573 VAL A1578 -1 N LEU A1574 O LEU A1668 SHEET 4 AA2 4 ILE A1708 GLU A1714 -1 O GLU A1709 N VAL A1577 SSBOND 1 CYS A 1449 CYS A 1472 1555 1555 2.06 SSBOND 2 CYS A 1454 CYS A 1467 1555 1555 2.05 SSBOND 3 CYS A 1463 CYS A 1479 1555 1555 2.04 SSBOND 4 CYS A 1490 CYS A 1514 1555 1555 2.06 SSBOND 5 CYS A 1496 CYS A 1509 1555 1555 2.07 SSBOND 6 CYS A 1505 CYS A 1521 1555 1555 2.08 SSBOND 7 CYS A 1528 CYS A 1554 1555 1555 2.05 SSBOND 8 CYS A 1536 CYS A 1549 1555 1555 2.03 SSBOND 9 CYS A 1545 CYS A 1561 1555 1555 2.10 SSBOND 10 CYS A 1675 CYS A 1682 1555 1555 2.06 LINK ND2 ASN A1489 C1 NAG A3004 1555 1555 1.43 LINK ND2 ASN A1587 C1 NAG A3005 1555 1555 1.44 LINK O ASP A1457 CA CA A3003 1555 1555 2.53 LINK OD1 ASN A1460 CA CA A3003 1555 1555 2.30 LINK O VAL A1462 CA CA A3003 1555 1555 2.36 LINK OD1 ASN A1464 CA CA A3003 1555 1555 2.64 LINK OD2 ASP A1475 CA CA A3003 1555 1555 2.51 LINK OD2 ASP A1478 CA CA A3003 1555 1555 2.54 LINK O TYR A1499 CA CA A3002 1555 1555 2.35 LINK OD1 ASP A1502 CA CA A3002 1555 1555 2.60 LINK O HIS A1504 CA CA A3002 1555 1555 2.26 LINK OD2 ASP A1506 CA CA A3002 1555 1555 2.14 LINK OD1 ASP A1517 CA CA A3002 1555 1555 2.54 LINK OD2 ASP A1517 CA CA A3002 1555 1555 2.61 LINK OD2 ASP A1520 CA CA A3002 1555 1555 2.23 LINK O HIS A1539 CA CA A3001 1555 1555 2.37 LINK OD1 ASP A1542 CA CA A3001 1555 1555 2.59 LINK O HIS A1544 CA CA A3001 1555 1555 2.35 LINK OD2 ASP A1546 CA CA A3001 1555 1555 2.33 LINK OD1 ASP A1557 CA CA A3001 1555 1555 2.63 LINK OD2 ASP A1557 CA CA A3001 1555 1555 2.36 LINK OD2 ASP A1560 CA CA A3001 1555 1555 2.39 CRYST1 65.724 65.724 161.683 90.00 90.00 90.00 P 42 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015215 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015215 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006185 0.00000