data_7ACB # _entry.id 7ACB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7ACB pdb_00007acb 10.2210/pdb7acb/pdb WWPDB D_1292111163 ? ? BMRB 34558 ? ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Capra hircus Cathelicidin-1 (dodecylphosphocholine)' _pdbx_database_related.db_id 34558 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 7ACB _pdbx_database_status.recvd_initial_deposition_date 2020-09-10 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.status_code_nmr_data REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Myshkin, M.Y.' 1 ? 'Mironov, P.' 2 ? 'Shenkarev, Z.O.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country CH _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Front Microbiol' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1664-302X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 12 _citation.language ? _citation.page_first 2249 _citation.page_last ? _citation.title ;Dodecapeptide Cathelicidins of Cetartiodactyla: Structure, Mechanism of Antimicrobial Action, and Synergistic Interaction With Other Cathelicidins ; _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.3389/fmicb.2021.725526 _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bolosov, I.A.' 1 ? primary 'Panteleev, P.V.' 2 ? primary 'Sychev, S.V.' 3 ? primary 'Sukhanov, S.V.' 4 ? primary 'Mironov, P.A.' 5 ? primary 'Myshkin, M.Y.' 6 ? primary 'Shenkarev, Z.O.' 7 ? primary 'Ovchinnikova, T.V.' 8 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 7ACB _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.000 _cell.length_a_esd ? _cell.length_b 1.000 _cell.length_b_esd ? _cell.length_c 1.000 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ACB _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Capra hircus Cathelicidin-1 (dodecylphosphocholine)' _entity.formula_weight 1508.920 _entity.pdbx_number_of_molecules 4 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code RICQFVLIRVCR _entity_poly.pdbx_seq_one_letter_code_can RICQFVLIRVCR _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ARG n 1 2 ILE n 1 3 CYS n 1 4 GLN n 1 5 PHE n 1 6 VAL n 1 7 LEU n 1 8 ILE n 1 9 ARG n 1 10 VAL n 1 11 CYS n 1 12 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 12 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Capra hircus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9925 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 7ACB _struct_ref.pdbx_db_accession 7ACB _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7ACB A 1 ? 12 ? 7ACB 11 ? 22 ? 11 22 2 1 7ACB B 1 ? 12 ? 7ACB 111 ? 122 ? 111 122 3 1 7ACB C 1 ? 12 ? 7ACB 211 ? 222 ? 211 222 4 1 7ACB D 1 ? 12 ? 7ACB 311 ? 322 ? 311 322 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 2 '2D 1H-1H NOESY' 3 isotropic 2 1 2 '2D 1H-1H TOCSY' 3 isotropic 3 1 1 '2D 1H-15N HSQC' 1 isotropic 5 1 1 '3D 1H-15N NOESY' 1 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 313 _pdbx_nmr_exptl_sample_conditions.pressure_units Pa _pdbx_nmr_exptl_sample_conditions.pressure AMBIENT _pdbx_nmr_exptl_sample_conditions.pH 4.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.01 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label 'ChDode DPC' _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '0.96 mM 15 Capra hircus Cathelicidin-1, 1.6 % [U-99% 2H] DPC, 95% H2O/5% D2O' '95% H2O/5% D2O' 'ChDode 15N DPC' micelle ? 2 '0.336 mM Capra hircus Cathelicidin-1 (dodecylphosphocholine), 1.6 % [U-99% 2H] DPC, 95% H2O/5% D2O' '95% H2O/5% D2O' 'ChDode DPC' micelle ? # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 'AVANCE III' ? Bruker 800 ? 3 'AVANCE III' ? Bruker 600 ? # _pdbx_nmr_refine.entry_id 7ACB _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 7ACB _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 7ACB _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'target function' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement CYANA 3.98.13 'Guntert, Mumenthaler and Wuthrich' 2 'structure calculation' CYANA 3.98.13 'Guntert, Mumenthaler and Wuthrich' 3 collection TopSpin ? 'Bruker Biospin' 4 'chemical shift assignment' CARA ? 'Keller and Wuthrich' 5 'peak picking' CARA ? 'Keller and Wuthrich' # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7ACB _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 7ACB _struct.title 'Covalent/noncovalent tetramer of Capra hircus Cathelicidin-1 in DPC (dodecylphosphocholine) micelles' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7ACB _struct_keywords.text 'PROTEIN, ANTIMICROBIAL PROTEIN' _struct_keywords.pdbx_keywords 'ANTIMICROBIAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 3 SG ? ? ? 1_555 B CYS 11 SG ? ? A CYS 13 B CYS 121 1_555 ? ? ? ? ? ? ? 2.130 ? ? disulf2 disulf ? ? A CYS 11 SG ? ? ? 1_555 B CYS 3 SG ? ? A CYS 21 B CYS 113 1_555 ? ? ? ? ? ? ? 1.986 ? ? disulf3 disulf ? ? C CYS 3 SG ? ? ? 1_555 D CYS 11 SG ? ? C CYS 213 D CYS 321 1_555 ? ? ? ? ? ? ? 1.981 ? ? disulf4 disulf ? ? C CYS 11 SG ? ? ? 1_555 D CYS 3 SG ? ? C CYS 221 D CYS 313 1_555 ? ? ? ? ? ? ? 2.032 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 CYS B 3 ? ARG B 12 ? CYS B 113 ARG B 122 AA1 2 ILE A 2 ? CYS A 11 ? ILE A 12 CYS A 21 AA1 3 CYS D 3 ? ARG D 12 ? CYS D 313 ARG D 322 AA1 4 ILE C 2 ? CYS C 11 ? ILE C 212 CYS C 221 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O ARG B 12 ? O ARG B 122 N ILE A 2 ? N ILE A 12 AA1 2 3 N LEU A 7 ? N LEU A 17 O LEU D 7 ? O LEU D 317 AA1 3 4 O VAL D 10 ? O VAL D 320 N GLN C 4 ? N GLN C 214 # _database_PDB_matrix.entry_id 7ACB _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 7ACB _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ARG 1 11 11 ARG ARG A . n A 1 2 ILE 2 12 12 ILE ILE A . n A 1 3 CYS 3 13 13 CYS CYS A . n A 1 4 GLN 4 14 14 GLN GLN A . n A 1 5 PHE 5 15 15 PHE PHE A . n A 1 6 VAL 6 16 16 VAL VAL A . n A 1 7 LEU 7 17 17 LEU LEU A . n A 1 8 ILE 8 18 18 ILE ILE A . n A 1 9 ARG 9 19 19 ARG ARG A . n A 1 10 VAL 10 20 20 VAL VAL A . n A 1 11 CYS 11 21 21 CYS CYS A . n A 1 12 ARG 12 22 22 ARG ARG A . n B 1 1 ARG 1 111 111 ARG ARG B . n B 1 2 ILE 2 112 112 ILE ILE B . n B 1 3 CYS 3 113 113 CYS CYS B . n B 1 4 GLN 4 114 114 GLN GLN B . n B 1 5 PHE 5 115 115 PHE PHE B . n B 1 6 VAL 6 116 116 VAL VAL B . n B 1 7 LEU 7 117 117 LEU LEU B . n B 1 8 ILE 8 118 118 ILE ILE B . n B 1 9 ARG 9 119 119 ARG ARG B . n B 1 10 VAL 10 120 120 VAL VAL B . n B 1 11 CYS 11 121 121 CYS CYS B . n B 1 12 ARG 12 122 122 ARG ARG B . n C 1 1 ARG 1 211 211 ARG ARG C . n C 1 2 ILE 2 212 212 ILE ILE C . n C 1 3 CYS 3 213 213 CYS CYS C . n C 1 4 GLN 4 214 214 GLN GLN C . n C 1 5 PHE 5 215 215 PHE PHE C . n C 1 6 VAL 6 216 216 VAL VAL C . n C 1 7 LEU 7 217 217 LEU LEU C . n C 1 8 ILE 8 218 218 ILE ILE C . n C 1 9 ARG 9 219 219 ARG ARG C . n C 1 10 VAL 10 220 220 VAL VAL C . n C 1 11 CYS 11 221 221 CYS CYS C . n C 1 12 ARG 12 222 222 ARG ARG C . n D 1 1 ARG 1 311 311 ARG ARG D . n D 1 2 ILE 2 312 312 ILE ILE D . n D 1 3 CYS 3 313 313 CYS CYS D . n D 1 4 GLN 4 314 314 GLN GLN D . n D 1 5 PHE 5 315 315 PHE PHE D . n D 1 6 VAL 6 316 316 VAL VAL D . n D 1 7 LEU 7 317 317 LEU LEU D . n D 1 8 ILE 8 318 318 ILE ILE D . n D 1 9 ARG 9 319 319 ARG ARG D . n D 1 10 VAL 10 320 320 VAL VAL D . n D 1 11 CYS 11 321 321 CYS CYS D . n D 1 12 ARG 12 322 322 ARG ARG D . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3340 ? 1 MORE -32 ? 1 'SSA (A^2)' 4760 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-09-15 2 'Structure model' 1 1 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group Other # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category pdbx_database_status # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 2 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_pdbx_database_status.status_code_nmr_data' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 'Capra hircus Cathelicidin-1' 0.96 ? mM 15 1 DPC 1.6 ? % '[U-99% 2H]' 2 'Capra hircus Cathelicidin-1 (dodecylphosphocholine)' 0.336 ? mM 'natural abundance' 2 DPC 1.6 ? % '[U-99% 2H]' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS B 113 ? ? -177.58 84.52 2 1 CYS C 213 ? ? -177.13 96.84 3 2 CYS B 113 ? ? -177.37 95.82 4 2 CYS C 213 ? ? -177.33 93.81 5 3 CYS A 21 ? ? -170.14 123.42 6 3 CYS B 113 ? ? -177.87 97.00 7 3 CYS C 213 ? ? -177.45 93.26 8 4 CYS B 113 ? ? -177.34 96.02 9 4 CYS C 213 ? ? -177.00 95.29 10 5 CYS A 21 ? ? -174.25 119.34 11 5 CYS B 113 ? ? -177.60 99.43 12 5 CYS C 213 ? ? -176.98 99.08 13 6 CYS B 113 ? ? -177.36 98.58 14 6 CYS C 213 ? ? -177.34 90.91 15 7 CYS A 21 ? ? -174.69 119.39 16 7 CYS B 113 ? ? -175.77 110.92 17 7 VAL B 116 ? ? -175.68 146.66 18 7 CYS C 213 ? ? -175.56 106.36 19 7 CYS D 321 ? ? -174.53 113.91 20 8 CYS A 21 ? ? -169.93 119.81 21 8 CYS B 113 ? ? -176.64 105.53 22 8 CYS C 213 ? ? -177.38 96.26 23 8 ILE D 318 ? ? -174.11 142.15 24 9 CYS B 113 ? ? -177.59 94.76 25 9 CYS C 213 ? ? -177.67 105.65 26 9 CYS D 321 ? ? -174.59 125.13 27 10 CYS A 21 ? ? -174.74 118.90 28 10 CYS B 113 ? ? -177.51 100.30 29 10 VAL B 116 ? ? -173.16 148.08 30 10 CYS C 213 ? ? -176.83 101.58 31 11 CYS B 113 ? ? -177.00 98.19 32 11 CYS C 213 ? ? -176.43 109.07 33 11 CYS D 321 ? ? -172.62 119.51 34 12 CYS A 21 ? ? -170.12 120.75 35 12 CYS B 113 ? ? -175.31 104.69 36 12 CYS C 213 ? ? -177.94 90.02 37 12 CYS D 321 ? ? -173.96 124.43 38 13 CYS B 113 ? ? -177.18 97.25 39 13 CYS C 213 ? ? -177.19 95.39 40 14 ILE A 18 ? ? -171.01 133.98 41 14 CYS B 113 ? ? -177.20 93.17 42 14 VAL B 116 ? ? -172.34 148.65 43 14 CYS C 213 ? ? -176.76 90.27 44 15 CYS A 21 ? ? -171.42 124.56 45 15 CYS B 113 ? ? -177.92 99.37 46 15 CYS C 213 ? ? -178.18 97.28 47 15 CYS C 221 ? ? -67.98 87.10 48 16 CYS B 113 ? ? -176.62 99.16 49 16 VAL B 116 ? ? -171.97 140.78 50 16 CYS C 213 ? ? -176.88 100.63 51 17 CYS A 21 ? ? -173.15 122.16 52 17 CYS B 113 ? ? -177.47 98.24 53 17 CYS C 213 ? ? -175.24 100.00 54 18 CYS B 113 ? ? -177.27 100.12 55 18 CYS C 213 ? ? -176.50 112.61 56 18 CYS D 321 ? ? -173.16 122.08 57 19 CYS A 21 ? ? -172.85 125.47 58 19 CYS B 113 ? ? -177.97 98.37 59 19 CYS C 213 ? ? -176.30 109.72 60 19 CYS D 321 ? ? -174.83 121.24 61 20 CYS B 113 ? ? -177.29 96.86 62 20 CYS C 213 ? ? -177.25 99.35 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details 'Structure of ChDode dimer in DPC micelles was calculated based on the H-bonds and long range NOE contacts.' #