HEADER CELL CYCLE 17-SEP-20 7AEM TITLE STUDIES TOWARDS A REVERSIBLE EGFR C797S TRIPLE MUTANT INHIBITOR SERIES COMPND MOL_ID: 1; COMPND 2 MOLECULE: EPIDERMAL GROWTH FACTOR RECEPTOR; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PROTO-ONCOGENE C-ERBB-1,RECEPTOR TYROSINE-PROTEIN KINASE COMPND 5 ERBB-1; COMPND 6 EC: 2.7.10.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EGFR, ERBB, ERBB1, HER1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS EGFR, CELL CYCLE EXPDTA X-RAY DIFFRACTION AUTHOR D.HARGREAVES REVDAT 2 01-MAY-24 7AEM 1 REMARK REVDAT 1 07-APR-21 7AEM 0 JRNL AUTH N.FLOCH,M.R.V.FINLAY,A.BIANCO,S.BICKERTON,N.COLCLOUGH, JRNL AUTH 2 D.A.CROSS,E.M.CUOMO,C.M.GUEROT,D.HARGREAVES,M.J.MARTIN, JRNL AUTH 3 D.MCKERRECHER,D.J.O'NEILL,J.P.ORME,A.RAHI,P.D.SMITH,R.A.WARD JRNL TITL ABSTRACT 4451: EVALUATION OF THE THERAPEUTIC POTENTIAL OF JRNL TITL 2 PHOSPHINE OXIDE PYRAZOLE INHIBITORS IN TUMORS HARBORING EGFR JRNL TITL 3 C797S MUTATION JRNL REF CANCER RES. V. 79 4451 2019 JRNL REFN ESSN 1538-7445 JRNL DOI 10.1158/1538-7445.AM2019-4451 REMARK 2 REMARK 2 RESOLUTION. 2.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.7 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.13 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 15320 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 766 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 38 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.67 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.28 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 404 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2915 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 383 REMARK 3 BIN R VALUE (WORKING SET) : 0.2861 REMARK 3 BIN FREE R VALUE : 0.3843 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 21 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2488 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 40 REMARK 3 SOLVENT ATOMS : 8 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 109.7 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 90.01 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.370 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.348 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.231 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.366 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.237 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2584 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 3498 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 923 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 421 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2584 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 330 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 2821 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.16 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.74 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 20.45 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7AEM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-SEP-20. REMARK 100 THE DEPOSITION ID IS D_1292110113. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUN-16 REMARK 200 TEMPERATURE (KELVIN) : 100.000 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9897 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.17 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15326 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.650 REMARK 200 RESOLUTION RANGE LOW (A) : 46.310 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 8.600 REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.6 REMARK 200 DATA REDUNDANCY IN SHELL : 8.20 REMARK 200 R MERGE FOR SHELL (I) : 0.97200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: IN HOUSE REMARK 200 REMARK 200 REMARK: RHOMBOHEDRAL CRYSTAL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRIS SODIUM CITRATE 0.68M, PH 7.5, REMARK 280 VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 73.21500 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 73.21500 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 73.21500 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 73.21500 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 73.21500 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 73.21500 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 73.21500 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 73.21500 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 73.21500 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 73.21500 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 73.21500 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 73.21500 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 73.21500 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 73.21500 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 73.21500 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 73.21500 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 73.21500 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 73.21500 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 73.21500 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 73.21500 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 73.21500 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 73.21500 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 73.21500 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 73.21500 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 73.21500 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 73.21500 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 73.21500 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 73.21500 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 73.21500 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 73.21500 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 73.21500 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 73.21500 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 73.21500 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 73.21500 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 73.21500 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 73.21500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 677 REMARK 465 SER A 678 REMARK 465 THR A 679 REMARK 465 SER A 680 REMARK 465 LEU A 681 REMARK 465 TYR A 682 REMARK 465 LYS A 683 REMARK 465 LYS A 684 REMARK 465 ALA A 685 REMARK 465 GLY A 686 REMARK 465 SER A 687 REMARK 465 GLU A 688 REMARK 465 ASN A 689 REMARK 465 LEU A 690 REMARK 465 TYR A 691 REMARK 465 PHE A 692 REMARK 465 GLN A 693 REMARK 465 GLY A 694 REMARK 465 ARG A 748 REMARK 465 GLU A 749 REMARK 465 SER A 991 REMARK 465 PRO A 992 REMARK 465 THR A 993 REMARK 465 ASP A 994 REMARK 465 SER A 995 REMARK 465 ASN A 996 REMARK 465 PHE A 997 REMARK 465 TYR A 998 REMARK 465 ARG A 999 REMARK 465 ALA A 1000 REMARK 465 PRO A 1019 REMARK 465 GLN A 1020 REMARK 465 GLN A 1021 REMARK 465 GLY A 1022 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A1001 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 770 84.71 -150.42 REMARK 500 SER A 784 -57.95 -27.07 REMARK 500 LYS A 806 -41.07 -29.52 REMARK 500 ASP A 837 45.11 -146.35 REMARK 500 ASP A 855 82.35 58.22 REMARK 500 ALA A 864 -17.21 -48.84 REMARK 500 GLU A 872 -141.24 -130.35 REMARK 500 ASP A 974 76.34 -155.31 REMARK 500 MET A1002 -158.80 -115.52 REMARK 500 ASP A1003 -34.37 -131.30 REMARK 500 GLU A1004 -135.57 -106.00 REMARK 500 GLU A1005 -142.02 -73.17 REMARK 500 MET A1007 43.01 -105.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6GY A 1101 DBREF 7AEM A 695 1022 UNP P00533 EGFR_HUMAN 695 1022 SEQADV 7AEM GLY A 677 UNP P00533 EXPRESSION TAG SEQADV 7AEM SER A 678 UNP P00533 EXPRESSION TAG SEQADV 7AEM THR A 679 UNP P00533 EXPRESSION TAG SEQADV 7AEM SER A 680 UNP P00533 EXPRESSION TAG SEQADV 7AEM LEU A 681 UNP P00533 EXPRESSION TAG SEQADV 7AEM TYR A 682 UNP P00533 EXPRESSION TAG SEQADV 7AEM LYS A 683 UNP P00533 EXPRESSION TAG SEQADV 7AEM LYS A 684 UNP P00533 EXPRESSION TAG SEQADV 7AEM ALA A 685 UNP P00533 EXPRESSION TAG SEQADV 7AEM GLY A 686 UNP P00533 EXPRESSION TAG SEQADV 7AEM SER A 687 UNP P00533 EXPRESSION TAG SEQADV 7AEM GLU A 688 UNP P00533 EXPRESSION TAG SEQADV 7AEM ASN A 689 UNP P00533 EXPRESSION TAG SEQADV 7AEM LEU A 690 UNP P00533 EXPRESSION TAG SEQADV 7AEM TYR A 691 UNP P00533 EXPRESSION TAG SEQADV 7AEM PHE A 692 UNP P00533 EXPRESSION TAG SEQADV 7AEM GLN A 693 UNP P00533 EXPRESSION TAG SEQADV 7AEM GLY A 694 UNP P00533 EXPRESSION TAG SEQRES 1 A 346 GLY SER THR SER LEU TYR LYS LYS ALA GLY SER GLU ASN SEQRES 2 A 346 LEU TYR PHE GLN GLY SER GLY GLU ALA PRO ASN GLN ALA SEQRES 3 A 346 LEU LEU ARG ILE LEU LYS GLU THR GLU PHE LYS LYS ILE SEQRES 4 A 346 LYS VAL LEU GLY SER GLY ALA PHE GLY THR VAL TYR LYS SEQRES 5 A 346 GLY LEU TRP ILE PRO GLU GLY GLU LYS VAL LYS ILE PRO SEQRES 6 A 346 VAL ALA ILE LYS GLU LEU ARG GLU ALA THR SER PRO LYS SEQRES 7 A 346 ALA ASN LYS GLU ILE LEU ASP GLU ALA TYR VAL MET ALA SEQRES 8 A 346 SER VAL ASP ASN PRO HIS VAL CYS ARG LEU LEU GLY ILE SEQRES 9 A 346 CYS LEU THR SER THR VAL GLN LEU ILE THR GLN LEU MET SEQRES 10 A 346 PRO PHE GLY CYS LEU LEU ASP TYR VAL ARG GLU HIS LYS SEQRES 11 A 346 ASP ASN ILE GLY SER GLN TYR LEU LEU ASN TRP CYS VAL SEQRES 12 A 346 GLN ILE ALA LYS GLY MET ASN TYR LEU GLU ASP ARG ARG SEQRES 13 A 346 LEU VAL HIS ARG ASP LEU ALA ALA ARG ASN VAL LEU VAL SEQRES 14 A 346 LYS THR PRO GLN HIS VAL LYS ILE THR ASP PHE GLY LEU SEQRES 15 A 346 ALA LYS LEU LEU GLY ALA GLU GLU LYS GLU TYR HIS ALA SEQRES 16 A 346 GLU GLY GLY LYS VAL PRO ILE LYS TRP MET ALA LEU GLU SEQRES 17 A 346 SER ILE LEU HIS ARG ILE TYR THR HIS GLN SER ASP VAL SEQRES 18 A 346 TRP SER TYR GLY VAL THR VAL TRP GLU LEU MET THR PHE SEQRES 19 A 346 GLY SER LYS PRO TYR ASP GLY ILE PRO ALA SER GLU ILE SEQRES 20 A 346 SER SER ILE LEU GLU LYS GLY GLU ARG LEU PRO GLN PRO SEQRES 21 A 346 PRO ILE CYS THR ILE ASP VAL TYR MET ILE MET VAL LYS SEQRES 22 A 346 CYS TRP MET ILE ASP ALA ASP SER ARG PRO LYS PHE ARG SEQRES 23 A 346 GLU LEU ILE ILE GLU PHE SER LYS MET ALA ARG ASP PRO SEQRES 24 A 346 GLN ARG TYR LEU VAL ILE GLN GLY ASP GLU ARG MET HIS SEQRES 25 A 346 LEU PRO SER PRO THR ASP SER ASN PHE TYR ARG ALA LEU SEQRES 26 A 346 MET ASP GLU GLU ASP MET ASP ASP VAL VAL ASP ALA ASP SEQRES 27 A 346 GLU TYR LEU ILE PRO GLN GLN GLY HET 6GY A1101 40 HETNAM 6GY 5-CHLORO-N~4~-[2-(DIMETHYLPHOSPHORYL)PHENYL]-N~2~-{2- HETNAM 2 6GY METHOXY-4-[4-(4-METHYLPIPERAZIN-1-YL)PIPERIDIN-1- HETNAM 3 6GY YL]PHENYL}PYRIMIDINE-2,4-DIAMINE HETSYN 6GY BRIGATINIB FORMUL 2 6GY C29 H39 CL N7 O2 P FORMUL 3 HOH *8(H2 O) HELIX 1 AA1 LYS A 708 THR A 710 5 3 HELIX 2 AA2 SER A 752 VAL A 769 1 18 HELIX 3 AA3 CYS A 797 HIS A 805 1 9 HELIX 4 AA4 GLY A 810 ARG A 831 1 22 HELIX 5 AA5 ALA A 839 ARG A 841 5 3 HELIX 6 AA6 PRO A 877 MET A 881 5 5 HELIX 7 AA7 ALA A 882 ARG A 889 1 8 HELIX 8 AA8 THR A 892 THR A 909 1 18 HELIX 9 AA9 PRO A 919 GLY A 930 1 12 HELIX 10 AB1 THR A 940 CYS A 950 1 11 HELIX 11 AB2 ASP A 954 ARG A 958 5 5 HELIX 12 AB3 LYS A 960 ALA A 972 1 13 HELIX 13 AB4 ARG A 973 TYR A 978 5 6 SHEET 1 AA1 5 PHE A 712 SER A 720 0 SHEET 2 AA1 5 THR A 725 TRP A 731 -1 O VAL A 726 N LEU A 718 SHEET 3 AA1 5 ILE A 740 GLU A 746 -1 O ILE A 744 N TYR A 727 SHEET 4 AA1 5 VAL A 786 GLN A 791 -1 O THR A 790 N ALA A 743 SHEET 5 AA1 5 LEU A 777 LEU A 782 -1 N LEU A 778 O ILE A 789 SHEET 1 AA2 2 LEU A 833 VAL A 834 0 SHEET 2 AA2 2 LYS A 860 LEU A 861 -1 O LYS A 860 N VAL A 834 SHEET 1 AA3 2 VAL A 843 THR A 847 0 SHEET 2 AA3 2 HIS A 850 ILE A 853 -1 O LYS A 852 N LEU A 844 SHEET 1 AA4 2 TYR A 869 HIS A 870 0 SHEET 2 AA4 2 ILE A 890 TYR A 891 -1 O TYR A 891 N TYR A 869 SITE 1 AC1 12 LEU A 718 GLY A 719 PHE A 723 ALA A 743 SITE 2 AC1 12 GLN A 791 LEU A 792 MET A 793 PRO A 794 SITE 3 AC1 12 GLY A 796 GLU A 804 ARG A 841 LEU A 844 CRYST1 146.430 146.430 146.430 90.00 90.00 90.00 I 2 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006829 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006829 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006829 0.00000