HEADER TOXIN 18-SEP-20 7AEX TITLE NRD-HEPN DOMAINS (N-TERMINAL TRUNCATION) OF ESCHERICHIA COLI RNLA TITLE 2 ENDORIBONUCLEASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MRNA ENDORIBONUCLEASE TOXIN LS; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: RNASE LS,TOXIN LS; COMPND 5 EC: 3.1.-.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI (STRAIN K12); SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: RNLA, STD, YFJN, B2630, JW2611; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS ENDORIBONUCLEASE, HEPN PROTEIN, T4 PHAGE DENFENSE, TOXIN-ANTITOXIN KEYWDS 2 SYSTEM, TOXIN EXPDTA X-RAY DIFFRACTION AUTHOR G.GARCIA-RODRIGUEZ,R.LORIS REVDAT 3 31-JAN-24 7AEX 1 REMARK REVDAT 2 21-JUL-21 7AEX 1 JRNL REVDAT 1 09-JUN-21 7AEX 0 JRNL AUTH G.GARCIA-RODRIGUEZ,D.CHARLIER,D.WILMAERTS,J.MICHIELS,R.LORIS JRNL TITL ALTERNATIVE DIMERIZATION IS REQUIRED FOR ACTIVITY AND JRNL TITL 2 INHIBITION OF THE HEPN RIBONUCLEASE RNLA. JRNL REF NUCLEIC ACIDS RES. V. 49 7164 2021 JRNL REFN ESSN 1362-4962 JRNL PMID 34139012 JRNL DOI 10.1093/NAR/GKAB513 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH G.GARCIA-RODRIGUEZ,A.TALAVERA PEREZ,A.KONIJNENBERG,F.SOBOTT, REMARK 1 AUTH 2 J.MICHIELS,R.LORIS REMARK 1 TITL THE ESCHERICHIA COLI RNLA-RNLB TOXIN-ANTITOXIN COMPLEX: REMARK 1 TITL 2 PRODUCTION, CHARACTERIZATION AND CRYSTALLIZATION. REMARK 1 REF ACTA CRYSTALLOGR F STRUCT V. 76 31 2020 REMARK 1 REF 2 BIOL COMMUN REMARK 1 REFN ESSN 2053-230X REMARK 1 DOI 10.1107/S2053230X19017175 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.19 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.8 REMARK 3 NUMBER OF REFLECTIONS : 21202 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.820 REMARK 3 FREE R VALUE TEST SET COUNT : 1871 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.1900 - 4.5800 1.00 1769 172 0.1570 0.1927 REMARK 3 2 4.5700 - 3.6300 1.00 1666 163 0.1425 0.1870 REMARK 3 3 3.6300 - 3.1700 1.00 1646 161 0.1828 0.2373 REMARK 3 4 3.1700 - 2.8800 0.98 1618 158 0.2136 0.2696 REMARK 3 5 2.8800 - 2.6800 0.98 1597 158 0.2129 0.2506 REMARK 3 6 2.6800 - 2.5200 0.97 1595 153 0.1834 0.2345 REMARK 3 7 2.5200 - 2.3900 0.96 1560 147 0.1959 0.2584 REMARK 3 8 2.3900 - 2.2900 0.95 1549 152 0.2026 0.2874 REMARK 3 9 2.2900 - 2.2000 0.93 1508 149 0.2150 0.3156 REMARK 3 10 2.2000 - 2.1200 0.89 1427 138 0.2342 0.2500 REMARK 3 11 2.1200 - 2.0600 0.83 1326 129 0.2636 0.2955 REMARK 3 12 2.0600 - 2.0000 0.72 1167 107 0.2905 0.3730 REMARK 3 13 2.0000 - 1.9500 0.57 903 84 0.3320 0.3585 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.227 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.790 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.65 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2154 REMARK 3 ANGLE : 0.864 2928 REMARK 3 CHIRALITY : 0.054 342 REMARK 3 PLANARITY : 0.005 372 REMARK 3 DIHEDRAL : 15.962 289 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 91 THROUGH 121 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.5687 24.3494 18.7324 REMARK 3 T TENSOR REMARK 3 T11: 0.2694 T22: 0.2066 REMARK 3 T33: 0.1730 T12: -0.0468 REMARK 3 T13: 0.0670 T23: 0.0687 REMARK 3 L TENSOR REMARK 3 L11: 7.1716 L22: 6.1079 REMARK 3 L33: 3.9588 L12: -2.9936 REMARK 3 L13: 0.6797 L23: 0.9201 REMARK 3 S TENSOR REMARK 3 S11: -0.0285 S12: 0.0600 S13: 0.0375 REMARK 3 S21: 0.1670 S22: -0.0535 S23: 0.0971 REMARK 3 S31: 0.2126 S32: 0.1221 S33: 0.0422 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 122 THROUGH 143 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.9195 34.9904 16.3912 REMARK 3 T TENSOR REMARK 3 T11: 0.2129 T22: 0.1842 REMARK 3 T33: 0.2276 T12: -0.0397 REMARK 3 T13: 0.0249 T23: -0.0023 REMARK 3 L TENSOR REMARK 3 L11: 4.4176 L22: 8.2508 REMARK 3 L33: 5.2229 L12: -2.8668 REMARK 3 L13: 0.1491 L23: -2.7653 REMARK 3 S TENSOR REMARK 3 S11: 0.0884 S12: 0.1828 S13: 0.4286 REMARK 3 S21: -0.0283 S22: -0.3974 S23: -0.5634 REMARK 3 S31: -0.1235 S32: 0.5570 S33: 0.1149 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 144 THROUGH 159 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.4283 29.4967 14.5181 REMARK 3 T TENSOR REMARK 3 T11: 0.2841 T22: 0.2433 REMARK 3 T33: 0.2995 T12: -0.0081 REMARK 3 T13: -0.0034 T23: 0.0719 REMARK 3 L TENSOR REMARK 3 L11: 5.7731 L22: 9.1832 REMARK 3 L33: 4.3838 L12: -2.2118 REMARK 3 L13: -0.1247 L23: 0.5018 REMARK 3 S TENSOR REMARK 3 S11: 0.2280 S12: 0.2662 S13: -0.5206 REMARK 3 S21: 0.0821 S22: -0.3383 S23: -0.7789 REMARK 3 S31: -0.1087 S32: 0.4244 S33: 0.1433 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 160 THROUGH 181 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.1674 23.4978 19.7967 REMARK 3 T TENSOR REMARK 3 T11: 0.1947 T22: 0.1986 REMARK 3 T33: 0.1394 T12: -0.0079 REMARK 3 T13: -0.0021 T23: -0.0176 REMARK 3 L TENSOR REMARK 3 L11: 4.3105 L22: 5.1094 REMARK 3 L33: 2.8942 L12: -2.2650 REMARK 3 L13: -0.3932 L23: -0.9531 REMARK 3 S TENSOR REMARK 3 S11: 0.0376 S12: -0.0184 S13: -0.1162 REMARK 3 S21: -0.0721 S22: -0.1721 S23: -0.0399 REMARK 3 S31: -0.0163 S32: 0.3397 S33: 0.2335 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 182 THROUGH 203 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.1052 10.4810 18.0201 REMARK 3 T TENSOR REMARK 3 T11: 0.3224 T22: 0.2119 REMARK 3 T33: 0.1807 T12: -0.0201 REMARK 3 T13: -0.0568 T23: -0.0135 REMARK 3 L TENSOR REMARK 3 L11: 6.5943 L22: 6.9889 REMARK 3 L33: 4.4605 L12: 1.6397 REMARK 3 L13: -2.4079 L23: -2.4994 REMARK 3 S TENSOR REMARK 3 S11: -0.2038 S12: 0.6331 S13: -0.1213 REMARK 3 S21: -0.5242 S22: 0.2396 S23: 0.0987 REMARK 3 S31: -0.1168 S32: -0.2993 S33: 0.0280 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 204 THROUGH 221 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.5275 5.6802 37.2571 REMARK 3 T TENSOR REMARK 3 T11: 0.3077 T22: 0.2312 REMARK 3 T33: 0.3905 T12: -0.0364 REMARK 3 T13: 0.1264 T23: -0.0195 REMARK 3 L TENSOR REMARK 3 L11: 0.8797 L22: 5.3196 REMARK 3 L33: 9.1268 L12: 0.3982 REMARK 3 L13: 1.3610 L23: 4.8266 REMARK 3 S TENSOR REMARK 3 S11: -0.2167 S12: -0.4359 S13: -0.0456 REMARK 3 S21: 0.2701 S22: -0.2735 S23: 0.0184 REMARK 3 S31: 0.1895 S32: -0.9795 S33: 0.2367 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 222 THROUGH 246 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.0983 9.9024 27.3487 REMARK 3 T TENSOR REMARK 3 T11: 0.1989 T22: 0.1771 REMARK 3 T33: 0.1830 T12: -0.0061 REMARK 3 T13: -0.0354 T23: 0.0367 REMARK 3 L TENSOR REMARK 3 L11: 8.0934 L22: 3.7119 REMARK 3 L33: 6.5778 L12: -0.8026 REMARK 3 L13: -3.7286 L23: 1.8730 REMARK 3 S TENSOR REMARK 3 S11: -0.0751 S12: 0.2404 S13: -0.1645 REMARK 3 S21: -0.1082 S22: -0.0264 S23: -0.1203 REMARK 3 S31: 0.0196 S32: -0.2021 S33: 0.0833 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 247 THROUGH 300 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.2768 24.9163 43.3585 REMARK 3 T TENSOR REMARK 3 T11: 0.4176 T22: 0.2679 REMARK 3 T33: 0.2410 T12: -0.0194 REMARK 3 T13: -0.0063 T23: 0.0099 REMARK 3 L TENSOR REMARK 3 L11: 2.3718 L22: 3.7973 REMARK 3 L33: 8.1058 L12: 0.3601 REMARK 3 L13: -1.0855 L23: 4.5633 REMARK 3 S TENSOR REMARK 3 S11: 0.1441 S12: -0.3129 S13: 0.3534 REMARK 3 S21: -0.1052 S22: -0.0699 S23: -0.0972 REMARK 3 S31: -0.8618 S32: 0.3208 S33: -0.0379 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 301 THROUGH 322 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.8335 20.1690 42.0552 REMARK 3 T TENSOR REMARK 3 T11: 0.2412 T22: 0.2210 REMARK 3 T33: 0.2132 T12: -0.0412 REMARK 3 T13: -0.0279 T23: 0.0172 REMARK 3 L TENSOR REMARK 3 L11: 6.5287 L22: 2.2646 REMARK 3 L33: 3.2621 L12: -0.4548 REMARK 3 L13: -3.0334 L23: 0.9781 REMARK 3 S TENSOR REMARK 3 S11: 0.1863 S12: -0.3719 S13: -0.0829 REMARK 3 S21: 0.3814 S22: -0.1194 S23: -0.1929 REMARK 3 S31: -0.3501 S32: 0.3604 S33: -0.0318 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 323 THROUGH 336 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.3941 14.4151 27.0524 REMARK 3 T TENSOR REMARK 3 T11: 0.3093 T22: 0.3576 REMARK 3 T33: 0.3215 T12: 0.0000 REMARK 3 T13: -0.0234 T23: -0.0416 REMARK 3 L TENSOR REMARK 3 L11: 6.6390 L22: 6.3405 REMARK 3 L33: 4.7279 L12: 2.5709 REMARK 3 L13: -0.8942 L23: -1.6372 REMARK 3 S TENSOR REMARK 3 S11: 0.1080 S12: 0.0857 S13: -0.2424 REMARK 3 S21: 0.3358 S22: -0.2710 S23: -0.3914 REMARK 3 S31: -0.5444 S32: 0.1255 S33: 0.0682 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 337 THROUGH 357 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.7822 9.9722 39.5234 REMARK 3 T TENSOR REMARK 3 T11: 0.3461 T22: 0.3270 REMARK 3 T33: 0.2721 T12: -0.0557 REMARK 3 T13: -0.0515 T23: 0.0214 REMARK 3 L TENSOR REMARK 3 L11: 8.3476 L22: 5.7019 REMARK 3 L33: 5.8020 L12: -5.5999 REMARK 3 L13: -6.9778 L23: 5.4168 REMARK 3 S TENSOR REMARK 3 S11: -0.3754 S12: -0.4650 S13: 0.0032 REMARK 3 S21: 1.0919 S22: 0.2174 S23: -0.0045 REMARK 3 S31: 1.0861 S32: 0.1490 S33: 0.2367 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7AEX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-SEP-20. REMARK 100 THE DEPOSITION ID IS D_1292110147. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUL-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : STARANISO REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23246 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.946 REMARK 200 RESOLUTION RANGE LOW (A) : 45.190 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 200 DATA REDUNDANCY : 13.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.7200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 74.2 REMARK 200 DATA REDUNDANCY IN SHELL : 11.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.840 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4I80 REMARK 200 REMARK 200 REMARK: PLATES REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M NACL; 0.1 M BIS-TRIS; PH 5.5; 25 REMARK 280 % PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 34.82900 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.83800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.82900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.83800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1790 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 83 REMARK 465 HIS A 84 REMARK 465 HIS A 85 REMARK 465 HIS A 86 REMARK 465 HIS A 87 REMARK 465 HIS A 88 REMARK 465 HIS A 89 REMARK 465 SER A 90 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 91 CG CD OE1 OE2 REMARK 470 GLN A 274 CG CD OE1 NE2 REMARK 470 ARG A 339 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 145 -94.58 -94.54 REMARK 500 LEU A 168 -138.44 -112.05 REMARK 500 ALA A 216 -124.12 54.23 REMARK 500 ALA A 216 -124.31 54.23 REMARK 500 ALA A 276 -50.07 66.52 REMARK 500 ALA A 286 -142.79 56.12 REMARK 500 ILE A 356 74.68 -103.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 564 DISTANCE = 6.05 ANGSTROMS DBREF 7AEX A 92 357 UNP P52129 RNLA_ECOLI 92 357 SEQADV 7AEX MET A 83 UNP P52129 INITIATING METHIONINE SEQADV 7AEX HIS A 84 UNP P52129 EXPRESSION TAG SEQADV 7AEX HIS A 85 UNP P52129 EXPRESSION TAG SEQADV 7AEX HIS A 86 UNP P52129 EXPRESSION TAG SEQADV 7AEX HIS A 87 UNP P52129 EXPRESSION TAG SEQADV 7AEX HIS A 88 UNP P52129 EXPRESSION TAG SEQADV 7AEX HIS A 89 UNP P52129 EXPRESSION TAG SEQADV 7AEX SER A 90 UNP P52129 EXPRESSION TAG SEQADV 7AEX GLU A 91 UNP P52129 EXPRESSION TAG SEQRES 1 A 275 MET HIS HIS HIS HIS HIS HIS SER GLU ILE ASN PRO ALA SEQRES 2 A 275 GLU PHE GLU GLN VAL ASN MET VAL LEU GLN GLY PHE VAL SEQRES 3 A 275 GLU THR SER VAL LEU PRO VAL LEU GLU LEU SER ALA ASP SEQRES 4 A 275 GLU SER HIS ILE GLU PHE ARG GLU HIS SER ARG ASN ALA SEQRES 5 A 275 HIS THR VAL VAL TRP LYS ILE ILE SER THR SER TYR GLN SEQRES 6 A 275 ASP GLU LEU THR VAL SER LEU HIS ILE THR THR GLY LYS SEQRES 7 A 275 LEU GLN ILE GLN GLY ARG PRO LEU SER CYS TYR ARG VAL SEQRES 8 A 275 PHE THR PHE ASN LEU ALA ALA LEU LEU ASP LEU GLN GLY SEQRES 9 A 275 LEU GLU LYS VAL LEU ILE ARG GLN GLU ASP GLY LYS ALA SEQRES 10 A 275 ASN ILE VAL GLN GLN GLU VAL ALA ARG THR TYR LEU GLN SEQRES 11 A 275 THR VAL MET ALA ASP ALA TYR PRO HIS LEU HIS VAL THR SEQRES 12 A 275 ALA GLU LYS LEU LEU VAL SER GLY LEU CYS VAL LYS LEU SEQRES 13 A 275 ALA ALA PRO ASP LEU PRO ASP TYR CYS MET LEU LEU TYR SEQRES 14 A 275 PRO GLU LEU ARG THR ILE GLU GLY VAL LEU LYS SER LYS SEQRES 15 A 275 MET SER GLY LEU GLY MET PRO VAL GLN GLN PRO ALA GLY SEQRES 16 A 275 PHE GLY THR TYR PHE ASP LYS PRO ALA ALA HIS TYR ILE SEQRES 17 A 275 LEU LYS PRO GLN PHE ALA ALA THR LEU ARG PRO GLU GLN SEQRES 18 A 275 ILE ASN ILE ILE SER THR ALA TYR THR PHE PHE ASN VAL SEQRES 19 A 275 GLU ARG HIS SER LEU PHE HIS MET GLU THR VAL VAL ASP SEQRES 20 A 275 ALA SER ARG MET ILE SER ASP MET ALA ARG LEU MET GLY SEQRES 21 A 275 LYS ALA THR ARG ALA TRP GLY ILE ILE LYS ASP LEU TYR SEQRES 22 A 275 ILE VAL FORMUL 2 HOH *164(H2 O) HELIX 1 AA1 ASN A 93 GLU A 98 5 6 HELIX 2 AA2 VAL A 108 ASP A 121 1 14 HELIX 3 AA3 LEU A 168 ALA A 179 1 12 HELIX 4 AA4 ALA A 180 LEU A 182 5 3 HELIX 5 AA5 ASP A 183 ARG A 193 1 11 HELIX 6 AA6 LYS A 198 VAL A 202 5 5 HELIX 7 AA7 GLN A 203 ALA A 216 1 14 HELIX 8 AA8 ASP A 217 LEU A 222 5 6 HELIX 9 AA9 HIS A 223 ALA A 239 1 17 HELIX 10 AB1 TYR A 246 LEU A 249 5 4 HELIX 11 AB2 LEU A 250 LEU A 268 1 19 HELIX 12 AB3 ALA A 276 THR A 280 5 5 HELIX 13 AB4 LYS A 292 ALA A 297 1 6 HELIX 14 AB5 ARG A 300 HIS A 323 1 24 HELIX 15 AB6 MET A 324 ASP A 329 1 6 HELIX 16 AB7 ALA A 330 MET A 333 5 4 HELIX 17 AB8 ASP A 336 ILE A 356 1 21 SHEET 1 AA1 5 VAL A 100 LEU A 104 0 SHEET 2 AA1 5 LYS A 160 GLY A 165 -1 O GLY A 165 N VAL A 100 SHEET 3 AA1 5 ASP A 148 HIS A 155 -1 N HIS A 155 O LYS A 160 SHEET 4 AA1 5 THR A 136 SER A 143 -1 N ILE A 141 O LEU A 150 SHEET 5 AA1 5 ILE A 125 ARG A 132 -1 N HIS A 130 O VAL A 138 SHEET 1 AA2 2 PHE A 282 ASP A 283 0 SHEET 2 AA2 2 ILE A 290 LEU A 291 -1 O ILE A 290 N ASP A 283 CRYST1 69.658 81.676 54.251 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014356 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012243 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018433 0.00000