HEADER ANTIMICROBIAL PROTEIN 21-SEP-20 7AFZ TITLE L1 METALLO-B-LACTAMASE WITH COMPOUND EBL-1306 COMPND MOL_ID: 1; COMPND 2 MOLECULE: METALLO-BETA-LACTAMASE L1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CLASS B3 METALLO-BETA-LACTAMASE L1, BETA-LACTAMASE TYPE II, COMPND 5 PENICILLINASE; COMPND 6 EC: 3.5.2.6; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STENOTROPHOMONAS MALTOPHILIA; SOURCE 3 ORGANISM_COMMON: PSEUDOMONAS MALTOPHILIA; SOURCE 4 ORGANISM_TAXID: 40324; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: SOLUBL21 KEYWDS INHIBITOR, LACTAMASE, ANTIBIOTIC RESISTANCE, INDOLE, ANTIMICROBIAL KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.HINCHLIFFE,J.SPENCER,J.BREM REVDAT 4 31-JAN-24 7AFZ 1 REMARK REVDAT 3 26-JAN-22 7AFZ 1 JRNL REVDAT 2 22-DEC-21 7AFZ 1 JRNL REMARK REVDAT 1 06-OCT-21 7AFZ 0 JRNL AUTH J.BREM,T.PANDUWAWALA,J.U.HANSEN,J.HEWITT,E.LIEPINS,P.DONETS, JRNL AUTH 2 L.ESPINA,A.J.M.FARLEY,K.SHUBIN,G.G.CAMPILLOS,P.KIURU, JRNL AUTH 3 S.SHISHODIA,D.KRAHN,R.K.LESNIAK,J.SCHMIDT ADRIAN, JRNL AUTH 4 K.CALVOPINA,M.C.TURRIENTES,M.E.KAVANAGH,D.LUBRIKS, JRNL AUTH 5 P.HINCHLIFFE,G.W.LANGLEY,A.F.ABOKLAISH,A.ENEROTH,M.BACKLUND, JRNL AUTH 6 A.G.BARAN,E.I.NIELSEN,M.SPEAKE,J.KUKA,J.ROBINSON, JRNL AUTH 7 S.GRINBERGA,L.ROBINSON,M.A.MCDONOUGH,A.M.RYDZIK, JRNL AUTH 8 T.M.LEISSING,J.C.JIMENEZ-CASTELLANOS,M.B.AVISON, JRNL AUTH 9 S.DA SILVA PINTO,A.D.PANNIFER,M.MARTJUGA,E.WIDLAKE,M.PRIEDE, JRNL AUTH10 I.HOPKINS NAVRATILOVA,M.GNIADKOWSKI,A.K.BELFRAGE,P.BRANDT, JRNL AUTH11 J.YLI-KAUHALUOMA,E.BACQUE,M.G.P.PAGE,F.BJORKLING, JRNL AUTH12 J.M.TYRRELL,J.SPENCER,P.A.LANG,P.BARANCZEWSKI,R.CANTON, JRNL AUTH13 S.P.MCELROY,P.S.JONES,F.BAQUERO,E.SUNA,A.MORRISON,T.R.WALSH, JRNL AUTH14 C.J.SCHOFIELD JRNL TITL IMITATION OF BETA-LACTAM BINDING ENABLES BROAD-SPECTRUM JRNL TITL 2 METALLO-BETA-LACTAMASE INHIBITORS. JRNL REF NAT.CHEM. V. 14 15 2022 JRNL REFN ESSN 1755-4349 JRNL PMID 34903857 JRNL DOI 10.1038/S41557-021-00831-X REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 66.62 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 51248 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.153 REMARK 3 R VALUE (WORKING SET) : 0.152 REMARK 3 FREE R VALUE : 0.168 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 2543 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 66.6170 - 3.9309 1.00 2972 153 0.1576 0.1507 REMARK 3 2 3.9309 - 3.1201 1.00 2785 142 0.1352 0.1514 REMARK 3 3 3.1201 - 2.7257 1.00 2751 151 0.1434 0.1358 REMARK 3 4 2.7257 - 2.4764 1.00 2711 160 0.1335 0.1548 REMARK 3 5 2.4764 - 2.2989 1.00 2721 136 0.1262 0.1721 REMARK 3 6 2.2989 - 2.1634 1.00 2709 133 0.1310 0.1447 REMARK 3 7 2.1634 - 2.0550 1.00 2678 149 0.1376 0.1557 REMARK 3 8 2.0550 - 1.9656 1.00 2711 123 0.1317 0.1531 REMARK 3 9 1.9656 - 1.8899 1.00 2690 125 0.1365 0.1927 REMARK 3 10 1.8899 - 1.8247 1.00 2675 154 0.1554 0.1938 REMARK 3 11 1.8247 - 1.7676 1.00 2670 155 0.1617 0.1650 REMARK 3 12 1.7676 - 1.7171 1.00 2656 136 0.1739 0.2192 REMARK 3 13 1.7171 - 1.6719 1.00 2657 140 0.1806 0.2017 REMARK 3 14 1.6719 - 1.6311 1.00 2675 138 0.1977 0.2481 REMARK 3 15 1.6311 - 1.5940 1.00 2660 133 0.2110 0.2456 REMARK 3 16 1.5940 - 1.5601 1.00 2661 138 0.2363 0.2335 REMARK 3 17 1.5601 - 1.5289 1.00 2655 145 0.2592 0.2766 REMARK 3 18 1.5289 - 1.5000 1.00 2668 132 0.2827 0.3161 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.660 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2099 REMARK 3 ANGLE : 0.933 2874 REMARK 3 CHIRALITY : 0.053 313 REMARK 3 PLANARITY : 0.008 376 REMARK 3 DIHEDRAL : 10.728 1231 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 14 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.0298 -6.0146 2.0019 REMARK 3 T TENSOR REMARK 3 T11: 0.3001 T22: 0.3928 REMARK 3 T33: 0.1903 T12: -0.0670 REMARK 3 T13: -0.0232 T23: 0.0753 REMARK 3 L TENSOR REMARK 3 L11: 1.1568 L22: 3.9111 REMARK 3 L33: 4.3764 L12: -1.4871 REMARK 3 L13: -1.4889 L23: 3.9502 REMARK 3 S TENSOR REMARK 3 S11: 0.3154 S12: -0.1058 S13: -0.0277 REMARK 3 S21: 1.1047 S22: -0.2565 S23: 0.0402 REMARK 3 S31: 0.6671 S32: -0.5020 S33: 0.0814 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 15 THROUGH 81 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.3245 21.4687 8.6274 REMARK 3 T TENSOR REMARK 3 T11: 0.2670 T22: 0.1513 REMARK 3 T33: 0.2074 T12: 0.0669 REMARK 3 T13: 0.0984 T23: 0.0607 REMARK 3 L TENSOR REMARK 3 L11: 1.6591 L22: 2.1907 REMARK 3 L33: 2.1491 L12: -0.2013 REMARK 3 L13: 0.3257 L23: 0.6300 REMARK 3 S TENSOR REMARK 3 S11: 0.1681 S12: 0.0851 S13: 0.2793 REMARK 3 S21: -0.2423 S22: 0.0221 S23: -0.1803 REMARK 3 S31: -0.3537 S32: -0.2150 S33: -0.1468 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 82 THROUGH 156 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.3763 8.0459 9.6065 REMARK 3 T TENSOR REMARK 3 T11: 0.1586 T22: 0.1029 REMARK 3 T33: 0.1534 T12: 0.0156 REMARK 3 T13: 0.0315 T23: 0.0043 REMARK 3 L TENSOR REMARK 3 L11: 1.5040 L22: 0.7719 REMARK 3 L33: 1.4275 L12: -0.3717 REMARK 3 L13: 0.2325 L23: 0.0028 REMARK 3 S TENSOR REMARK 3 S11: 0.0419 S12: 0.0215 S13: 0.1600 REMARK 3 S21: -0.0568 S22: 0.0585 S23: -0.1314 REMARK 3 S31: 0.0021 S32: -0.0201 S33: -0.0859 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 157 THROUGH 201 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.6495 8.7788 21.8246 REMARK 3 T TENSOR REMARK 3 T11: 0.1419 T22: 0.1407 REMARK 3 T33: 0.1493 T12: 0.0364 REMARK 3 T13: 0.0100 T23: 0.0016 REMARK 3 L TENSOR REMARK 3 L11: 1.3651 L22: 3.8944 REMARK 3 L33: 1.3430 L12: 0.4364 REMARK 3 L13: -0.2838 L23: 0.4022 REMARK 3 S TENSOR REMARK 3 S11: 0.0535 S12: -0.1368 S13: 0.1456 REMARK 3 S21: 0.0920 S22: 0.0565 S23: -0.1357 REMARK 3 S31: -0.0833 S32: -0.0743 S33: -0.0700 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 202 THROUGH 223 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.2678 8.0352 28.2637 REMARK 3 T TENSOR REMARK 3 T11: 0.1373 T22: 0.1558 REMARK 3 T33: 0.1376 T12: 0.0314 REMARK 3 T13: -0.0023 T23: -0.0172 REMARK 3 L TENSOR REMARK 3 L11: 2.1148 L22: 5.8123 REMARK 3 L33: 2.3606 L12: 0.4397 REMARK 3 L13: 0.3081 L23: 0.6365 REMARK 3 S TENSOR REMARK 3 S11: 0.0654 S12: -0.2317 S13: 0.1755 REMARK 3 S21: 0.3332 S22: 0.0756 S23: -0.4953 REMARK 3 S31: 0.0570 S32: 0.0017 S33: -0.0980 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 224 THROUGH 245 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.5601 19.6391 22.7695 REMARK 3 T TENSOR REMARK 3 T11: 0.2036 T22: 0.2043 REMARK 3 T33: 0.1503 T12: 0.0699 REMARK 3 T13: 0.0475 T23: 0.0249 REMARK 3 L TENSOR REMARK 3 L11: 2.0404 L22: 1.8062 REMARK 3 L33: 3.1948 L12: 0.0623 REMARK 3 L13: 0.9765 L23: 0.0054 REMARK 3 S TENSOR REMARK 3 S11: 0.0273 S12: -0.0657 S13: 0.2106 REMARK 3 S21: 0.0940 S22: 0.0734 S23: -0.0218 REMARK 3 S31: -0.2748 S32: -0.4613 S33: -0.1047 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 246 THROUGH 267 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.0277 0.9174 30.8888 REMARK 3 T TENSOR REMARK 3 T11: 0.2603 T22: 0.2075 REMARK 3 T33: 0.1498 T12: 0.0051 REMARK 3 T13: 0.0209 T23: 0.0054 REMARK 3 L TENSOR REMARK 3 L11: 4.2298 L22: 3.2864 REMARK 3 L33: 1.0137 L12: 3.7184 REMARK 3 L13: -0.7925 L23: -0.6322 REMARK 3 S TENSOR REMARK 3 S11: -0.0114 S12: -0.0895 S13: -0.1114 REMARK 3 S21: 0.3922 S22: 0.0323 S23: -0.1387 REMARK 3 S31: 0.1289 S32: -0.2153 S33: -0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7AFZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-SEP-20. REMARK 100 THE DEPOSITION ID IS D_1292111338. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-FEB-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91584 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51300 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 66.620 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 68.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 56.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5EVD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM HEPES PH 7.75, 2.0 M AMMONIUM REMARK 280 SULPHATE, 1.5% PEG400. 1 UL PROTEIN (15 MG/ML) MIXED WITH 1 UL REMARK 280 RESERVOIR., VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+1/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 32.70333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 65.40667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 32.70333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 65.40667 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 32.70333 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 65.40667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 32.70333 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 65.40667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 39690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -138.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 104.78000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 104.78000 REMARK 350 BIOMT2 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 406 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 421 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 PRO A 0 REMARK 465 ALA A 1 REMARK 465 ALA A 268 REMARK 465 ARG A 269 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 592 O HOH A 593 1.86 REMARK 500 O24 RBW A 303 O HOH A 401 1.94 REMARK 500 O HOH A 402 O HOH A 588 2.02 REMARK 500 O HOH A 416 O HOH A 427 2.06 REMARK 500 O HOH A 595 O HOH A 597 2.09 REMARK 500 O HOH A 557 O HOH A 573 2.16 REMARK 500 OD1 ASP A 120 O HOH A 402 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 420 O HOH A 609 4655 1.94 REMARK 500 O HOH A 582 O HOH A 589 12555 2.05 REMARK 500 O HOH A 611 O HOH A 614 8555 2.13 REMARK 500 O HOH A 599 O HOH A 599 12555 2.14 REMARK 500 O HOH A 445 O HOH A 445 8555 2.18 REMARK 500 O HOH A 403 O HOH A 610 12555 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 53 154.61 69.38 REMARK 500 ALA A 85 50.18 -95.77 REMARK 500 ASP A 171 -169.07 -109.22 REMARK 500 TYR A 199 74.76 -150.65 REMARK 500 CYS A 218 74.44 -155.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 84 NE2 REMARK 620 2 HIS A 86 ND1 99.2 REMARK 620 3 HIS A 160 NE2 98.1 106.1 REMARK 620 4 HOH A 414 O 113.7 111.9 124.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 88 OD2 REMARK 620 2 HIS A 89 NE2 93.8 REMARK 620 3 HIS A 225 NE2 91.7 99.1 REMARK 620 4 RBW A 303 O09 158.8 107.3 84.1 REMARK 620 5 HOH A 414 O 86.5 111.2 149.7 86.8 REMARK 620 N 1 2 3 4 DBREF 7AFZ A 1 269 UNP P52700 BLA1_STEMA 22 290 SEQADV 7AFZ GLY A -1 UNP P52700 EXPRESSION TAG SEQADV 7AFZ PRO A 0 UNP P52700 EXPRESSION TAG SEQRES 1 A 271 GLY PRO ALA GLU VAL PRO LEU PRO GLN LEU ARG ALA TYR SEQRES 2 A 271 THR VAL ASP ALA SER TRP LEU GLN PRO MET ALA PRO LEU SEQRES 3 A 271 GLN ILE ALA ASP HIS THR TRP GLN ILE GLY THR GLU ASP SEQRES 4 A 271 LEU THR ALA LEU LEU VAL GLN THR PRO ASP GLY ALA VAL SEQRES 5 A 271 LEU LEU ASP GLY GLY MET PRO GLN MET ALA SER HIS LEU SEQRES 6 A 271 LEU ASP ASN MET LYS ALA ARG GLY VAL THR PRO ARG ASP SEQRES 7 A 271 LEU ARG LEU ILE LEU LEU SER HIS ALA HIS ALA ASP HIS SEQRES 8 A 271 ALA GLY PRO VAL ALA GLU LEU LYS ARG ARG THR GLY ALA SEQRES 9 A 271 LYS VAL ALA ALA ASN ALA GLU SER ALA VAL LEU LEU ALA SEQRES 10 A 271 ARG GLY GLY SER ASP ASP LEU HIS PHE GLY ASP GLY ILE SEQRES 11 A 271 THR TYR PRO PRO ALA ASN ALA ASP ARG ILE VAL MET ASP SEQRES 12 A 271 GLY GLU VAL ILE THR VAL GLY GLY ILE VAL PHE THR ALA SEQRES 13 A 271 HIS PHE MET ALA GLY HIS THR PRO GLY SER THR ALA TRP SEQRES 14 A 271 THR TRP THR ASP THR ARG ASN GLY LYS PRO VAL ARG ILE SEQRES 15 A 271 ALA TYR ALA ASP SER LEU SER ALA PRO GLY TYR GLN LEU SEQRES 16 A 271 GLN GLY ASN PRO ARG TYR PRO HIS LEU ILE GLU ASP TYR SEQRES 17 A 271 ARG ARG SER PHE ALA THR VAL ARG ALA LEU PRO CYS ASP SEQRES 18 A 271 VAL LEU LEU THR PRO HIS PRO GLY ALA SER ASN TRP ASP SEQRES 19 A 271 TYR ALA ALA GLY ALA ARG ALA GLY ALA LYS ALA LEU THR SEQRES 20 A 271 CYS LYS ALA TYR ALA ASP ALA ALA GLU GLN LYS PHE ASP SEQRES 21 A 271 GLY GLN LEU ALA LYS GLU THR ALA GLY ALA ARG HET ZN A 301 1 HET ZN A 302 1 HET RBW A 303 46 HET SO4 A 304 5 HET SO4 A 305 5 HETNAM ZN ZINC ION HETNAM RBW 3-[3-CHLORANYL-4-(METHYLSULFONYLMETHYL)PHENYL]-7- HETNAM 2 RBW PROPAN-2-YL-1~{H}-INDOLE-2-CARBOXYLIC ACID HETNAM SO4 SULFATE ION FORMUL 2 ZN 2(ZN 2+) FORMUL 4 RBW C20 H20 CL N O4 S FORMUL 5 SO4 2(O4 S 2-) FORMUL 7 HOH *243(H2 O) HELIX 1 AA1 ASP A 14 GLN A 19 5 6 HELIX 2 AA2 MET A 56 GLN A 58 5 3 HELIX 3 AA3 MET A 59 ARG A 70 1 12 HELIX 4 AA4 THR A 73 ARG A 75 5 3 HELIX 5 AA5 HIS A 86 GLY A 91 1 6 HELIX 6 AA6 PRO A 92 THR A 100 1 9 HELIX 7 AA7 ASN A 107 ARG A 116 1 10 HELIX 8 AA8 HIS A 201 ALA A 215 1 15 HELIX 9 AA9 HIS A 225 ASN A 230 5 6 HELIX 10 AB1 ASP A 232 ALA A 239 5 8 HELIX 11 AB2 THR A 245 GLY A 267 1 23 SHEET 1 AA1 7 LEU A 24 ALA A 27 0 SHEET 2 AA1 7 THR A 30 GLN A 32 -1 O GLN A 32 N LEU A 24 SHEET 3 AA1 7 LEU A 41 THR A 45 -1 O LEU A 42 N TRP A 31 SHEET 4 AA1 7 GLY A 48 LEU A 52 -1 O VAL A 50 N VAL A 43 SHEET 5 AA1 7 LEU A 77 LEU A 81 1 O LEU A 81 N LEU A 51 SHEET 6 AA1 7 LYS A 103 ALA A 106 1 O LYS A 103 N ILE A 80 SHEET 7 AA1 7 ARG A 137 ILE A 138 1 O ARG A 137 N ALA A 106 SHEET 1 AA2 5 VAL A 144 VAL A 147 0 SHEET 2 AA2 5 ILE A 150 PHE A 156 -1 O PHE A 152 N ILE A 145 SHEET 3 AA2 5 THR A 165 ARG A 173 -1 O ALA A 166 N HIS A 155 SHEET 4 AA2 5 LYS A 176 TYR A 182 -1 O TYR A 182 N TRP A 167 SHEET 5 AA2 5 VAL A 220 LEU A 222 1 O VAL A 220 N ALA A 181 SSBOND 1 CYS A 218 CYS A 246 1555 1555 2.10 LINK NE2 HIS A 84 ZN ZN A 302 1555 1555 2.03 LINK ND1 HIS A 86 ZN ZN A 302 1555 1555 2.04 LINK OD2 ASP A 88 ZN ZN A 301 1555 1555 2.07 LINK NE2 HIS A 89 ZN ZN A 301 1555 1555 2.03 LINK NE2 HIS A 160 ZN ZN A 302 1555 1555 2.05 LINK NE2 HIS A 225 ZN ZN A 301 1555 1555 2.03 LINK ZN ZN A 301 O09 RBW A 303 1555 1555 2.22 LINK ZN ZN A 301 O HOH A 414 1555 1555 2.00 LINK ZN ZN A 302 O HOH A 414 1555 1555 2.14 CRYST1 104.780 104.780 98.110 90.00 90.00 120.00 P 64 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009544 0.005510 0.000000 0.00000 SCALE2 0.000000 0.011020 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010193 0.00000