HEADER TRANSFERASE 29-SEP-20 7AJX TITLE THE X-RAY STRUCTURE OF L,D-TRANSPEPTIDASE LDTA FROM VIBRIO CHOLERAE IN TITLE 2 COMPLEX WITH MEROPENEM COMPND MOL_ID: 1; COMPND 2 MOLECULE: L,D-TRANSPEPTIDASE YCBB; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE; SOURCE 3 ORGANISM_TAXID: 666; SOURCE 4 GENE: ERS013138_01558, ERS013186_00077, ERS013206_00149; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS L, D-TRANSPEPTIDASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.T.BATUECAS,J.A.HERMOSO REVDAT 2 31-JAN-24 7AJX 1 REMARK REVDAT 1 06-OCT-21 7AJX 0 JRNL AUTH M.T.BATUECAS,J.A.HERMOSO JRNL TITL THE X-RAY STRUCTURE OF L,D-TRANSPEPTIDASE LDTA FROM VIBRIO JRNL TITL 2 CHOLERAE IN COMPLEX WITH MEROPENEM JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.34 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 22737 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.267 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.856 REMARK 3 FREE R VALUE TEST SET COUNT : 1104 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.62 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1578 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.94 REMARK 3 BIN R VALUE (WORKING SET) : 0.3780 REMARK 3 BIN FREE R VALUE SET COUNT : 73 REMARK 3 BIN FREE R VALUE : 0.4100 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3966 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 75 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 64.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -5.68900 REMARK 3 B22 (A**2) : 0.08700 REMARK 3 B33 (A**2) : 5.60200 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.473 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.300 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.316 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 16.229 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4099 ; 0.006 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3820 ; 0.002 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5590 ; 1.452 ; 1.657 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8783 ; 1.188 ; 1.583 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 489 ; 7.293 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 229 ;34.661 ;23.013 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 640 ;16.968 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;20.052 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 533 ; 0.068 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4655 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 959 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 778 ; 0.216 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 43 ; 0.226 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1943 ; 0.166 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 81 ; 0.177 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1959 ; 4.140 ; 6.492 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1957 ; 4.139 ; 6.489 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2447 ; 6.335 ; 9.737 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2447 ; 6.335 ; 9.737 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2140 ; 4.704 ; 7.062 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2141 ; 4.703 ; 7.062 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3143 ; 7.476 ;10.395 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3144 ; 7.475 ;10.395 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 7AJX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-OCT-20. REMARK 100 THE DEPOSITION ID IS D_1292111511. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUL-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979160 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22790 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.550 REMARK 200 RESOLUTION RANGE LOW (A) : 46.386 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 7AJ9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES PH 7 + 10% PEG 8000 + 10% REMARK 280 ETHYLENE GLYCOL, VAPOR DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.93850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 57.64250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 50.61200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 57.64250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.93850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 50.61200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMER REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMER REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 17 REMARK 465 ALA A 18 REMARK 465 MSE A 19 REMARK 465 VAL A 20 REMARK 465 THR A 21 REMARK 465 GLN A 22 REMARK 465 ASN A 513 REMARK 465 GLY A 514 REMARK 465 ASP A 515 REMARK 465 ALA A 516 REMARK 465 SER A 517 REMARK 465 PRO A 518 REMARK 465 ASN A 519 REMARK 465 LEU A 520 REMARK 465 THR A 521 REMARK 465 LYS A 522 REMARK 465 ILE A 523 REMARK 465 GLU A 524 REMARK 465 ASN A 525 REMARK 465 LEU A 526 REMARK 465 TYR A 527 REMARK 465 PHE A 528 REMARK 465 GLN A 529 REMARK 465 GLY A 530 REMARK 465 SER A 531 REMARK 465 SER A 532 REMARK 465 SER A 533 REMARK 465 HIS A 534 REMARK 465 HIS A 535 REMARK 465 HIS A 536 REMARK 465 HIS A 537 REMARK 465 HIS A 538 REMARK 465 HIS A 539 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MSE A 196 CG - SE - CE ANGL. DEV. = 14.7 DEGREES REMARK 500 MSE A 261 CG - SE - CE ANGL. DEV. = 15.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 124 16.34 -143.25 REMARK 500 PHE A 130 -58.64 -134.68 REMARK 500 GLU A 131 -70.53 -68.82 REMARK 500 LYS A 200 116.52 -164.27 REMARK 500 THR A 287 -129.52 39.37 REMARK 500 MSE A 292 148.20 -176.28 REMARK 500 SER A 314 145.40 -170.67 REMARK 500 ARG A 358 -68.32 -102.08 REMARK 500 THR A 416 65.39 -119.83 REMARK 500 SER A 471 -163.39 -125.56 REMARK 500 GLU A 494 56.60 39.59 REMARK 500 HIS A 505 30.48 73.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7AJ9 RELATED DB: PDB REMARK 900 7AJ9 CONTAINS THE APO STRUCTURE DBREF1 7AJX A 22 523 UNP A0A655UKB5_VIBCL DBREF2 7AJX A A0A655UKB5 22 523 SEQADV 7AJX ALA A 17 UNP A0A655UKB EXPRESSION TAG SEQADV 7AJX ALA A 18 UNP A0A655UKB EXPRESSION TAG SEQADV 7AJX MSE A 19 UNP A0A655UKB EXPRESSION TAG SEQADV 7AJX VAL A 20 UNP A0A655UKB EXPRESSION TAG SEQADV 7AJX THR A 21 UNP A0A655UKB EXPRESSION TAG SEQADV 7AJX GLU A 524 UNP A0A655UKB EXPRESSION TAG SEQADV 7AJX ASN A 525 UNP A0A655UKB EXPRESSION TAG SEQADV 7AJX LEU A 526 UNP A0A655UKB EXPRESSION TAG SEQADV 7AJX TYR A 527 UNP A0A655UKB EXPRESSION TAG SEQADV 7AJX PHE A 528 UNP A0A655UKB EXPRESSION TAG SEQADV 7AJX GLN A 529 UNP A0A655UKB EXPRESSION TAG SEQADV 7AJX GLY A 530 UNP A0A655UKB EXPRESSION TAG SEQADV 7AJX SER A 531 UNP A0A655UKB EXPRESSION TAG SEQADV 7AJX SER A 532 UNP A0A655UKB EXPRESSION TAG SEQADV 7AJX SER A 533 UNP A0A655UKB EXPRESSION TAG SEQADV 7AJX HIS A 534 UNP A0A655UKB EXPRESSION TAG SEQADV 7AJX HIS A 535 UNP A0A655UKB EXPRESSION TAG SEQADV 7AJX HIS A 536 UNP A0A655UKB EXPRESSION TAG SEQADV 7AJX HIS A 537 UNP A0A655UKB EXPRESSION TAG SEQADV 7AJX HIS A 538 UNP A0A655UKB EXPRESSION TAG SEQADV 7AJX HIS A 539 UNP A0A655UKB EXPRESSION TAG SEQRES 1 A 523 ALA ALA MSE VAL THR GLN ARG PHE VAL GLU LEU GLY TRP SEQRES 2 A 523 ILE ASP SER THR SER PRO VAL ASN GLU GLN ILE THR ASN SEQRES 3 A 523 PRO ALA LEU VAL GLU GLN ILE TYR HIS SER ASN ASN ASP SEQRES 4 A 523 GLN LEU LEU TRP SER ASP LEU ALA THR ALA ASN HIS PHE SEQRES 5 A 523 GLU ALA GLN LEU GLU VAL ILE HIS ARG ALA SER PHE SER SEQRES 6 A 523 PRO LEU PHE SER ARG GLN LEU PHE ALA LEU LYS SER TYR SEQRES 7 A 523 ARG GLN GLN ASP ARG TRP HIS GLU TYR ASP VAL LEU ALA SEQRES 8 A 523 THR ASP THR LEU LEU GLN TYR LEU SER TYR ALA GLU GLN SEQRES 9 A 523 ALA PRO LYS VAL GLY ILE ALA TRP PHE PHE GLU GLY GLN SEQRES 10 A 523 LEU ASP GLN PRO LEU ALA PRO PRO SER GLU GLU ALA GLN SEQRES 11 A 523 LEU ALA LEU HIS MSE ALA ILE GLY ASN GLN SER LEU ALA SEQRES 12 A 523 ARG LEU MSE ASP GLU TYR THR PRO GLN ASP PRO ALA TYR SEQRES 13 A 523 GLN GLN LEU LEU GLN ALA TYR GLN SER LEU SER SER ILE SEQRES 14 A 523 GLU PHE ASN GLU VAL ALA LEU TYR GLU GLN MSE GLU ARG SEQRES 15 A 523 LEU LYS ARG PRO GLY ASP PRO LEU SER HIS ARG GLU ALA SEQRES 16 A 523 LEU VAL GLN ARG LEU ALA LEU VAL ASN LEU ASP THR THR SEQRES 17 A 523 SER ILE LEU ASN ASP VAL ALA TYR TYR ASP ALA SER LEU SEQRES 18 A 523 GLU LYS PRO ILE LYS GLN PHE GLN LYS MSE HIS GLY LEU SEQRES 19 A 523 GLN THR ASP GLY VAL ILE GLY PRO GLN THR MSE LYS TRP SEQRES 20 A 523 LEU ASN THR SER VAL THR GLU ARG LEU ALA LEU LEU ALA SEQRES 21 A 523 LEU ASN ALA GLU ARG ILE ARG LEU TRP PRO THR GLN GLN SEQRES 22 A 523 ASP SER MSE ILE VAL VAL ASN VAL PRO GLY PHE ASP MSE SEQRES 23 A 523 LYS TYR TRP ASP ALA GLY ARG GLU VAL PHE GLU SER LYS SEQRES 24 A 523 VAL VAL VAL GLY LYS THR THR ARG PRO THR PRO VAL MSE SEQRES 25 A 523 ASN THR LYS LEU ASP SER LEU ILE ILE ASN PRO THR TRP SEQRES 26 A 523 ASN VAL PRO HIS LYS ILE MSE VAL GLU ASP ILE LEU PRO SEQRES 27 A 523 MSE VAL LYS ARG ASP SER GLU TYR LEU ALA ASN HIS HIS SEQRES 28 A 523 MSE GLU ILE ILE ARG GLY TRP SER ASP PRO GLU VAL ILE SEQRES 29 A 523 ASP PRO ALA LEU ILE ASP TRP GLU ALA VAL GLU PRO GLU SEQRES 30 A 523 THR PHE PRO TYR ARG LEU ARG GLN GLN ALA GLY VAL GLN SEQRES 31 A 523 ASN ALA LEU GLY THR TYR LYS PHE ASN THR PRO ASN SER SEQRES 32 A 523 ARG ALA ILE TYR LEU HIS ASP THR PRO SER LYS HIS LEU SEQRES 33 A 523 PHE ASN ASN ALA SER ARG ALA PHE SER SER GLY CYS ILE SEQRES 34 A 523 ARG VAL GLU ASN ALA GLU LYS PHE ALA GLN THR LEU LEU SEQRES 35 A 523 ALA ASN GLN GLY ILE THR LEU ASP ASP PHE PRO VAL SER SEQRES 36 A 523 THR GLN ALA ILE ALA LEU LYS LYS ARG ILE PRO VAL HIS SEQRES 37 A 523 ILE ILE TYR GLN THR VAL TRP TYR GLU GLU GLY VAL LEU SEQRES 38 A 523 HIS TYR ARG ASP ASP ILE TYR HIS TYR ASP ALA LEU ALA SEQRES 39 A 523 LEU GLY ASN GLY ASP ALA SER PRO ASN LEU THR LYS ILE SEQRES 40 A 523 GLU ASN LEU TYR PHE GLN GLY SER SER SER HIS HIS HIS SEQRES 41 A 523 HIS HIS HIS MODRES 7AJX MSE A 151 MET MODIFIED RESIDUE MODRES 7AJX MSE A 162 MET MODIFIED RESIDUE MODRES 7AJX MSE A 196 MET MODIFIED RESIDUE MODRES 7AJX MSE A 247 MET MODIFIED RESIDUE MODRES 7AJX MSE A 261 MET MODIFIED RESIDUE MODRES 7AJX MSE A 292 MET MODIFIED RESIDUE MODRES 7AJX MSE A 302 MET MODIFIED RESIDUE MODRES 7AJX MSE A 328 MET MODIFIED RESIDUE MODRES 7AJX MSE A 348 MET MODIFIED RESIDUE MODRES 7AJX MSE A 355 MET MODIFIED RESIDUE MODRES 7AJX MSE A 368 MET MODIFIED RESIDUE HET MSE A 151 8 HET MSE A 162 8 HET MSE A 196 8 HET MSE A 247 8 HET MSE A 261 8 HET MSE A 292 8 HET MSE A 302 8 HET MSE A 328 8 HET MSE A 348 8 HET MSE A 355 8 HET MSE A 368 8 HET MXR A 601 26 HET EDO A 602 4 HETNAM MSE SELENOMETHIONINE HETNAM MXR (2S,3R,4S)-4-{[(3S,5R)-5-(DIMETHYLCARBAMOYL)PYRROLIDIN- HETNAM 2 MXR 3-YL]SULFANYL}-2-[(2S,3R)-3-HYDROXY-1-OXOBUTAN-2-YL]- HETNAM 3 MXR 3-METHYL-3,4-DIHYDRO-2H-PYRROLE-5-CARBOXYLIC ACID HETNAM EDO 1,2-ETHANEDIOL HETSYN MXR MEROPENEM BOUND FORM (TAUTOMERISM) HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 11(C5 H11 N O2 SE) FORMUL 2 MXR C17 H27 N3 O5 S FORMUL 3 EDO C2 H6 O2 FORMUL 4 HOH *75(H2 O) HELIX 1 AA1 PRO A 35 ILE A 40 1 6 HELIX 2 AA2 ASN A 42 SER A 52 1 11 HELIX 3 AA3 ASP A 61 ALA A 78 1 18 HELIX 4 AA4 SER A 81 GLN A 97 1 17 HELIX 5 AA5 ARG A 99 GLY A 125 1 27 HELIX 6 AA6 GLY A 125 PHE A 130 1 6 HELIX 7 AA7 SER A 142 GLN A 156 1 15 HELIX 8 AA8 SER A 157 TYR A 165 1 9 HELIX 9 AA9 ASP A 169 SER A 184 1 16 HELIX 10 AB1 HIS A 208 VAL A 219 1 12 HELIX 11 AB2 ASP A 234 HIS A 248 1 15 HELIX 12 AB3 GLY A 257 ASN A 265 1 9 HELIX 13 AB4 SER A 267 ARG A 281 1 15 HELIX 14 AB5 ILE A 282 LEU A 284 5 3 HELIX 15 AB6 PRO A 344 ASP A 351 1 8 HELIX 16 AB7 ILE A 352 LYS A 357 1 6 HELIX 17 AB8 GLU A 361 HIS A 366 1 6 HELIX 18 AB9 ASP A 381 ILE A 385 5 5 HELIX 19 AC1 SER A 429 ASN A 435 5 7 HELIX 20 AC2 ASN A 449 GLN A 461 1 13 HELIX 21 AC3 ASP A 507 GLY A 512 1 6 SHEET 1 AA110 ALA A 439 SER A 441 0 SHEET 2 AA110 ARG A 309 GLY A 319 1 N VAL A 318 O SER A 441 SHEET 3 AA110 ILE A 445 VAL A 447 -1 O ARG A 446 N VAL A 317 SHEET 4 AA110 LEU A 424 HIS A 425 1 N HIS A 425 O VAL A 447 SHEET 5 AA110 TYR A 412 ASN A 415 -1 N PHE A 414 O LEU A 424 SHEET 6 AA110 MSE A 328 ILE A 337 -1 N ILE A 336 O LYS A 413 SHEET 7 AA110 GLN A 473 ILE A 486 -1 O VAL A 483 N THR A 330 SHEET 8 AA110 MSE A 292 ASN A 296 1 N ILE A 293 O HIS A 484 SHEET 9 AA110 ASP A 301 ASP A 306 -1 O LYS A 303 N VAL A 294 SHEET 10 AA110 ARG A 309 GLY A 319 -1 O ARG A 309 N ASP A 306 SHEET 1 AA2 4 TRP A 341 VAL A 343 0 SHEET 2 AA2 4 ARG A 398 GLN A 401 -1 O GLN A 401 N TRP A 341 SHEET 3 AA2 4 MSE A 368 ILE A 371 -1 N ILE A 371 O ARG A 398 SHEET 4 AA2 4 VAL A 379 ILE A 380 -1 O ILE A 380 N ILE A 370 SHEET 1 AA3 2 VAL A 490 GLU A 493 0 SHEET 2 AA3 2 VAL A 496 TYR A 499 -1 O HIS A 498 N TRP A 491 LINK C HIS A 150 N MSE A 151 1555 1555 1.33 LINK C MSE A 151 N ALA A 152 1555 1555 1.34 LINK C LEU A 161 N MSE A 162 1555 1555 1.34 LINK C MSE A 162 N ASP A 163 1555 1555 1.33 LINK C GLN A 195 N MSE A 196 1555 1555 1.34 LINK C MSE A 196 N GLU A 197 1555 1555 1.34 LINK C LYS A 246 N MSE A 247 1555 1555 1.33 LINK C MSE A 247 N HIS A 248 1555 1555 1.34 LINK C THR A 260 N MSE A 261 1555 1555 1.34 LINK C MSE A 261 N LYS A 262 1555 1555 1.34 LINK C SER A 291 N MSE A 292 1555 1555 1.35 LINK C MSE A 292 N ILE A 293 1555 1555 1.34 LINK C ASP A 301 N MSE A 302 1555 1555 1.33 LINK C MSE A 302 N LYS A 303 1555 1555 1.33 LINK C VAL A 327 N MSE A 328 1555 1555 1.33 LINK C MSE A 328 N ASN A 329 1555 1555 1.34 LINK C ILE A 347 N MSE A 348 1555 1555 1.34 LINK C MSE A 348 N VAL A 349 1555 1555 1.34 LINK C PRO A 354 N MSE A 355 1555 1555 1.34 LINK C MSE A 355 N VAL A 356 1555 1555 1.35 LINK C HIS A 367 N MSE A 368 1555 1555 1.34 LINK C MSE A 368 N GLU A 369 1555 1555 1.34 LINK SG CYS A 444 C1 MXR A 601 1555 1555 1.86 CRYST1 57.877 101.224 115.285 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017278 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009879 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008674 0.00000