HEADER TRANSFERASE 16-OCT-20 7APF TITLE CRYSTAL STRUCTURE OF JAK3 IN COMPLEX WITH FM601 (COMPOUND 10A) COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN KINASE JAK3; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: JANUS KINASE 3,JAK-3,LEUKOCYTE JANUS KINASE,L-JAK; COMPND 5 EC: 2.7.10.2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: JAK3; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS KINASE, JAK3, INHIBITOR, COVALENT INHIBITOR, STRUCTURAL GENOMICS, KEYWDS 2 STRUCTURAL GENOMICS CONSORTIUM, SGC, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.CHAIKUAD,M.FORSTER,M.GEHRINGER,S.LAUFER,S.KNAPP,STRUCTURAL GENOMICS AUTHOR 2 CONSORTIUM (SGC) REVDAT 3 31-JAN-24 7APF 1 REMARK REVDAT 2 13-JAN-21 7APF 1 JRNL REVDAT 1 02-DEC-20 7APF 0 JRNL AUTH M.FORSTER,X.J.LIANG,M.SCHRODER,S.GERSTENECKER,A.CHAIKUAD, JRNL AUTH 2 S.KNAPP,S.LAUFER,M.GEHRINGER JRNL TITL DISCOVERY OF A NOVEL CLASS OF COVALENT DUAL INHIBITORS JRNL TITL 2 TARGETING THE PROTEIN KINASES BMX AND BTK. JRNL REF INT J MOL SCI V. 21 2020 JRNL REFN ESSN 1422-0067 JRNL PMID 33291717 JRNL DOI 10.3390/IJMS21239269 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0222 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.56 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 3 NUMBER OF REFLECTIONS : 35361 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1868 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2586 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.41 REMARK 3 BIN R VALUE (WORKING SET) : 0.2650 REMARK 3 BIN FREE R VALUE SET COUNT : 158 REMARK 3 BIN FREE R VALUE : 0.3240 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4588 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 98 REMARK 3 SOLVENT ATOMS : 300 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.38 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.08000 REMARK 3 B22 (A**2) : 1.27000 REMARK 3 B33 (A**2) : -1.07000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.10000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.236 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.193 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.150 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.157 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.922 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4894 ; 0.013 ; 0.014 REMARK 3 BOND LENGTHS OTHERS (A): 4327 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6607 ; 1.299 ; 1.647 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10158 ; 0.933 ; 1.656 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 609 ;19.836 ; 5.493 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 267 ;31.119 ;20.337 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 798 ;14.210 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 48 ;18.012 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 571 ; 0.077 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6559 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 933 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 814 1103 B 814 1103 9214 0.110 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 814 A 908 REMARK 3 ORIGIN FOR THE GROUP (A): -79.1750 8.4252 -40.4539 REMARK 3 T TENSOR REMARK 3 T11: 0.0828 T22: 0.0492 REMARK 3 T33: 0.0926 T12: -0.0156 REMARK 3 T13: -0.0392 T23: 0.0033 REMARK 3 L TENSOR REMARK 3 L11: 2.8909 L22: 0.8273 REMARK 3 L33: 0.1403 L12: 0.5011 REMARK 3 L13: -0.2831 L23: 0.0214 REMARK 3 S TENSOR REMARK 3 S11: 0.0686 S12: 0.2870 S13: 0.0074 REMARK 3 S21: 0.1278 S22: 0.0092 S23: 0.0721 REMARK 3 S31: 0.0181 S32: -0.0275 S33: -0.0778 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 909 A 1103 REMARK 3 ORIGIN FOR THE GROUP (A): -53.3581 9.2767 -44.2462 REMARK 3 T TENSOR REMARK 3 T11: 0.0824 T22: 0.0095 REMARK 3 T33: 0.0605 T12: -0.0028 REMARK 3 T13: -0.0688 T23: 0.0026 REMARK 3 L TENSOR REMARK 3 L11: 1.2733 L22: 0.3975 REMARK 3 L33: 0.5778 L12: -0.2257 REMARK 3 L13: -0.3763 L23: -0.1505 REMARK 3 S TENSOR REMARK 3 S11: 0.0034 S12: 0.0912 S13: 0.0179 REMARK 3 S21: -0.0241 S22: 0.0110 S23: -0.0097 REMARK 3 S31: 0.0463 S32: -0.0271 S33: -0.0144 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 814 B 990 REMARK 3 ORIGIN FOR THE GROUP (A): -44.5843 9.5692 -9.0601 REMARK 3 T TENSOR REMARK 3 T11: 0.0827 T22: 0.0462 REMARK 3 T33: 0.0654 T12: -0.0113 REMARK 3 T13: -0.0601 T23: -0.0218 REMARK 3 L TENSOR REMARK 3 L11: 2.0903 L22: 0.2269 REMARK 3 L33: 1.0281 L12: 0.0382 REMARK 3 L13: -0.6455 L23: 0.2509 REMARK 3 S TENSOR REMARK 3 S11: 0.0507 S12: -0.2509 S13: 0.1417 REMARK 3 S21: -0.0401 S22: -0.0039 S23: 0.0227 REMARK 3 S31: 0.0292 S32: -0.0032 S33: -0.0468 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 991 B 1103 REMARK 3 ORIGIN FOR THE GROUP (A): -22.4018 8.1562 -11.3367 REMARK 3 T TENSOR REMARK 3 T11: 0.0720 T22: 0.2340 REMARK 3 T33: 0.0703 T12: 0.0255 REMARK 3 T13: -0.0517 T23: -0.0251 REMARK 3 L TENSOR REMARK 3 L11: 1.6619 L22: 1.0889 REMARK 3 L33: 1.3411 L12: -0.0916 REMARK 3 L13: -0.9822 L23: 0.1114 REMARK 3 S TENSOR REMARK 3 S11: -0.1028 S12: -0.4787 S13: 0.0597 REMARK 3 S21: -0.1183 S22: 0.1084 S23: -0.0699 REMARK 3 S31: 0.0485 S32: 0.5294 S33: -0.0055 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED HYDROGENS REMARK 3 HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 4 REMARK 4 7APF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-OCT-20. REMARK 100 THE DEPOSITION ID IS D_1292111857. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-APR-18 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99986 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.1 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37245 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 45.560 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.10800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.7 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : 0.72100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5LWM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 3350, 0.1-0.2 M MGCL2, 0.1 M REMARK 280 MES, PH 5.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 31.24900 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 810 REMARK 465 MET A 811 REMARK 465 GLN A 812 REMARK 465 ASP A 813 REMARK 465 SER B 810 REMARK 465 MET B 811 REMARK 465 GLN B 812 REMARK 465 ASP B 813 REMARK 465 GLY B 892 REMARK 465 PRO B 893 REMARK 465 GLY B 894 REMARK 465 ARG B 895 REMARK 465 GLN B 896 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A1040 OG REMARK 470 SER B 897 OG REMARK 470 SER B1040 OG REMARK 470 ARG B1103 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O RQZ B 1201 O HOH B 1301 2.02 REMARK 500 O RQZ A 1201 O HOH A 1301 2.06 REMARK 500 O RQZ A 1201 O HOH A 1302 2.12 REMARK 500 OG SER A 1048 O HOH A 1303 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 859 48.49 72.44 REMARK 500 ARG A 948 -49.11 75.08 REMARK 500 ALA A 966 -164.77 -125.02 REMARK 500 ASP A 967 82.07 52.75 REMARK 500 ARG B 948 -48.31 74.93 REMARK 500 ALA B 966 -163.38 -125.48 REMARK 500 ASP B 967 84.73 48.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 820 0.10 SIDE CHAIN REMARK 500 ARG A 870 0.20 SIDE CHAIN REMARK 500 ARG A 887 0.17 SIDE CHAIN REMARK 500 ARG A 918 0.16 SIDE CHAIN REMARK 500 ARG A1036 0.14 SIDE CHAIN REMARK 500 ARG A1085 0.12 SIDE CHAIN REMARK 500 ARG B 953 0.11 SIDE CHAIN REMARK 500 ARG B1036 0.13 SIDE CHAIN REMARK 500 ARG B1085 0.12 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 7APF A 812 1103 UNP P52333 JAK3_HUMAN 812 1103 DBREF 7APF B 812 1103 UNP P52333 JAK3_HUMAN 812 1103 SEQADV 7APF SER A 810 UNP P52333 EXPRESSION TAG SEQADV 7APF MET A 811 UNP P52333 EXPRESSION TAG SEQADV 7APF ALA A 949 UNP P52333 ASP 949 CONFLICT SEQADV 7APF SER A 1040 UNP P52333 CYS 1040 CONFLICT SEQADV 7APF SER A 1048 UNP P52333 CYS 1048 CONFLICT SEQADV 7APF SER B 810 UNP P52333 EXPRESSION TAG SEQADV 7APF MET B 811 UNP P52333 EXPRESSION TAG SEQADV 7APF ALA B 949 UNP P52333 ASP 949 CONFLICT SEQADV 7APF SER B 1040 UNP P52333 CYS 1040 CONFLICT SEQADV 7APF SER B 1048 UNP P52333 CYS 1048 CONFLICT SEQRES 1 A 294 SER MET GLN ASP PRO THR ILE PHE GLU GLU ARG HIS LEU SEQRES 2 A 294 LYS TYR ILE SER GLN LEU GLY LYS GLY ASN PHE GLY SER SEQRES 3 A 294 VAL GLU LEU CYS ARG TYR ASP PRO LEU GLY ASP ASN THR SEQRES 4 A 294 GLY ALA LEU VAL ALA VAL LYS GLN LEU GLN HIS SER GLY SEQRES 5 A 294 PRO ASP GLN GLN ARG ASP PHE GLN ARG GLU ILE GLN ILE SEQRES 6 A 294 LEU LYS ALA LEU HIS SER ASP PHE ILE VAL LYS TYR ARG SEQRES 7 A 294 GLY VAL SER TYR GLY PRO GLY ARG GLN SER LEU ARG LEU SEQRES 8 A 294 VAL MET GLU TYR LEU PRO SER GLY CYS LEU ARG ASP PHE SEQRES 9 A 294 LEU GLN ARG HIS ARG ALA ARG LEU ASP ALA SER ARG LEU SEQRES 10 A 294 LEU LEU TYR SER SER GLN ILE CYS LYS GLY MET GLU TYR SEQRES 11 A 294 LEU GLY SER ARG ARG CYS VAL HIS ARG ALA LEU ALA ALA SEQRES 12 A 294 ARG ASN ILE LEU VAL GLU SER GLU ALA HIS VAL LYS ILE SEQRES 13 A 294 ALA ASP PHE GLY LEU ALA LYS LEU LEU PRO LEU ASP LYS SEQRES 14 A 294 ASP TYR TYR VAL VAL ARG GLU PRO GLY GLN SER PRO ILE SEQRES 15 A 294 PHE TRP TYR ALA PRO GLU SER LEU SER ASP ASN ILE PHE SEQRES 16 A 294 SER ARG GLN SER ASP VAL TRP SER PHE GLY VAL VAL LEU SEQRES 17 A 294 TYR GLU LEU PHE THR TYR CYS ASP LYS SER CYS SER PRO SEQRES 18 A 294 SER ALA GLU PHE LEU ARG MET MET GLY SER GLU ARG ASP SEQRES 19 A 294 VAL PRO ALA LEU SER ARG LEU LEU GLU LEU LEU GLU GLU SEQRES 20 A 294 GLY GLN ARG LEU PRO ALA PRO PRO ALA CYS PRO ALA GLU SEQRES 21 A 294 VAL HIS GLU LEU MET LYS LEU CYS TRP ALA PRO SER PRO SEQRES 22 A 294 GLN ASP ARG PRO SER PHE SER ALA LEU GLY PRO GLN LEU SEQRES 23 A 294 ASP MET LEU TRP SER GLY SER ARG SEQRES 1 B 294 SER MET GLN ASP PRO THR ILE PHE GLU GLU ARG HIS LEU SEQRES 2 B 294 LYS TYR ILE SER GLN LEU GLY LYS GLY ASN PHE GLY SER SEQRES 3 B 294 VAL GLU LEU CYS ARG TYR ASP PRO LEU GLY ASP ASN THR SEQRES 4 B 294 GLY ALA LEU VAL ALA VAL LYS GLN LEU GLN HIS SER GLY SEQRES 5 B 294 PRO ASP GLN GLN ARG ASP PHE GLN ARG GLU ILE GLN ILE SEQRES 6 B 294 LEU LYS ALA LEU HIS SER ASP PHE ILE VAL LYS TYR ARG SEQRES 7 B 294 GLY VAL SER TYR GLY PRO GLY ARG GLN SER LEU ARG LEU SEQRES 8 B 294 VAL MET GLU TYR LEU PRO SER GLY CYS LEU ARG ASP PHE SEQRES 9 B 294 LEU GLN ARG HIS ARG ALA ARG LEU ASP ALA SER ARG LEU SEQRES 10 B 294 LEU LEU TYR SER SER GLN ILE CYS LYS GLY MET GLU TYR SEQRES 11 B 294 LEU GLY SER ARG ARG CYS VAL HIS ARG ALA LEU ALA ALA SEQRES 12 B 294 ARG ASN ILE LEU VAL GLU SER GLU ALA HIS VAL LYS ILE SEQRES 13 B 294 ALA ASP PHE GLY LEU ALA LYS LEU LEU PRO LEU ASP LYS SEQRES 14 B 294 ASP TYR TYR VAL VAL ARG GLU PRO GLY GLN SER PRO ILE SEQRES 15 B 294 PHE TRP TYR ALA PRO GLU SER LEU SER ASP ASN ILE PHE SEQRES 16 B 294 SER ARG GLN SER ASP VAL TRP SER PHE GLY VAL VAL LEU SEQRES 17 B 294 TYR GLU LEU PHE THR TYR CYS ASP LYS SER CYS SER PRO SEQRES 18 B 294 SER ALA GLU PHE LEU ARG MET MET GLY SER GLU ARG ASP SEQRES 19 B 294 VAL PRO ALA LEU SER ARG LEU LEU GLU LEU LEU GLU GLU SEQRES 20 B 294 GLY GLN ARG LEU PRO ALA PRO PRO ALA CYS PRO ALA GLU SEQRES 21 B 294 VAL HIS GLU LEU MET LYS LEU CYS TRP ALA PRO SER PRO SEQRES 22 B 294 GLN ASP ARG PRO SER PHE SER ALA LEU GLY PRO GLN LEU SEQRES 23 B 294 ASP MET LEU TRP SER GLY SER ARG HET RQZ A1201 46 HET PHU A1202 10 HET EDO A1203 4 HET EDO A1204 4 HET EDO A1205 4 HET EDO A1206 4 HET EDO A1207 4 HET RQZ B1201 46 HET PHU B1202 10 HET EDO B1203 4 HET EDO B1204 4 HET EDO B1205 4 HETNAM RQZ 3-[3-(PROPANOYLAMINO)PHENYL]-1~{H}-PYRROLO[2,3- HETNAM 2 RQZ B]PYRIDINE-5-CARBOXAMIDE HETNAM PHU 1-PHENYLUREA HETNAM EDO 1,2-ETHANEDIOL HETSYN PHU PHENYLUREA HETSYN EDO ETHYLENE GLYCOL FORMUL 3 RQZ 2(C17 H16 N4 O2) FORMUL 4 PHU 2(C7 H8 N2 O) FORMUL 5 EDO 8(C2 H6 O2) FORMUL 15 HOH *300(H2 O) HELIX 1 AA1 GLU A 818 ARG A 820 5 3 HELIX 2 AA2 GLY A 861 LEU A 878 1 18 HELIX 3 AA3 PRO A 893 GLN A 896 5 4 HELIX 4 AA4 CYS A 909 ARG A 918 1 10 HELIX 5 AA5 ALA A 919 LEU A 921 5 3 HELIX 6 AA6 ASP A 922 ARG A 943 1 22 HELIX 7 AA7 ALA A 951 ARG A 953 5 3 HELIX 8 AA8 PRO A 990 TYR A 994 5 5 HELIX 9 AA9 ALA A 995 ASN A 1002 1 8 HELIX 10 AB1 ARG A 1006 THR A 1022 1 17 HELIX 11 AB2 ASP A 1025 CYS A 1028 5 4 HELIX 12 AB3 SER A 1029 MET A 1038 1 10 HELIX 13 AB4 PRO A 1045 GLU A 1056 1 12 HELIX 14 AB5 PRO A 1067 TRP A 1078 1 12 HELIX 15 AB6 SER A 1081 ARG A 1085 5 5 HELIX 16 AB7 SER A 1087 ARG A 1103 1 17 HELIX 17 AB8 GLU B 818 ARG B 820 5 3 HELIX 18 AB9 GLY B 861 LEU B 878 1 18 HELIX 19 AC1 CYS B 909 ARG B 918 1 10 HELIX 20 AC2 ALA B 919 LEU B 921 5 3 HELIX 21 AC3 ASP B 922 ARG B 943 1 22 HELIX 22 AC4 ALA B 951 ARG B 953 5 3 HELIX 23 AC5 PRO B 990 TYR B 994 5 5 HELIX 24 AC6 ALA B 995 ASN B 1002 1 8 HELIX 25 AC7 ARG B 1006 THR B 1022 1 17 HELIX 26 AC8 ASP B 1025 CYS B 1028 5 4 HELIX 27 AC9 SER B 1029 GLY B 1039 1 11 HELIX 28 AD1 PRO B 1045 GLU B 1056 1 12 HELIX 29 AD2 PRO B 1067 TRP B 1078 1 12 HELIX 30 AD3 SER B 1081 ARG B 1085 5 5 HELIX 31 AD4 SER B 1087 ARG B 1103 1 17 SHEET 1 AA1 5 LEU A 822 LYS A 830 0 SHEET 2 AA1 5 GLY A 834 TYR A 841 -1 O ARG A 840 N LYS A 823 SHEET 3 AA1 5 ALA A 850 LEU A 857 -1 O ALA A 850 N TYR A 841 SHEET 4 AA1 5 LEU A 898 GLU A 903 -1 O MET A 902 N ALA A 853 SHEET 5 AA1 5 TYR A 886 TYR A 891 -1 N ARG A 887 O VAL A 901 SHEET 1 AA2 2 CYS A 945 VAL A 946 0 SHEET 2 AA2 2 LYS A 972 LEU A 973 -1 O LYS A 972 N VAL A 946 SHEET 1 AA3 2 ILE A 955 SER A 959 0 SHEET 2 AA3 2 HIS A 962 ILE A 965 -1 O LYS A 964 N LEU A 956 SHEET 1 AA4 2 TYR A 980 VAL A 982 0 SHEET 2 AA4 2 ILE A1003 SER A1005 -1 O PHE A1004 N TYR A 981 SHEET 1 AA5 5 LEU B 822 LYS B 830 0 SHEET 2 AA5 5 GLY B 834 TYR B 841 -1 O ARG B 840 N LYS B 823 SHEET 3 AA5 5 ALA B 850 LEU B 857 -1 O ALA B 850 N TYR B 841 SHEET 4 AA5 5 ARG B 899 MET B 902 -1 O MET B 902 N ALA B 853 SHEET 5 AA5 5 TYR B 886 SER B 890 -1 N ARG B 887 O VAL B 901 SHEET 1 AA6 2 CYS B 945 VAL B 946 0 SHEET 2 AA6 2 LYS B 972 LEU B 973 -1 O LYS B 972 N VAL B 946 SHEET 1 AA7 2 ILE B 955 SER B 959 0 SHEET 2 AA7 2 HIS B 962 ILE B 965 -1 O LYS B 964 N LEU B 956 SHEET 1 AA8 2 TYR B 980 VAL B 982 0 SHEET 2 AA8 2 ILE B1003 SER B1005 -1 O PHE B1004 N TYR B 981 LINK SG ACYS A 909 C11ARQZ A1201 1555 1555 1.78 LINK SG BCYS A 909 C11BRQZ A1201 1555 1555 1.79 LINK SG ACYS B 909 C11ARQZ B1201 1555 1555 1.80 LINK SG BCYS B 909 C11BRQZ B1201 1555 1555 1.80 CRYST1 63.667 62.498 67.869 90.00 101.32 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015707 0.000000 0.003143 0.00000 SCALE2 0.000000 0.016001 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015026 0.00000