HEADER TRANSFERASE 20-OCT-20 7AQB TITLE CRYSTAL STRUCTURE OF HUMAN MITOGEN ACTIVATED PROTEIN KINASE 6 (MAPK6) COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE 6; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: MAPK 6,EXTRACELLULAR SIGNAL-REGULATED KINASE 3,ERK-3,MAP COMPND 5 KINASE ISOFORM P97,P97-MAPK; COMPND 6 EC: 2.7.11.24; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MAPK6, ERK3, PRKM6; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS MAPK6, ERK3, KINASE, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS KEYWDS 2 CONSORTIUM, SGC, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR P.FILIPPAKOPOULOS,M.SCHROEDER,A.CHAIKUAD,S.KNAPP,STRUCTURAL GENOMICS AUTHOR 2 CONSORTIUM (SGC) REVDAT 2 31-JAN-24 7AQB 1 REMARK REVDAT 1 11-NOV-20 7AQB 0 SPRSDE 11-NOV-20 7AQB 2I6L JRNL AUTH M.SCHRODER,P.FILIPPAKOPOULOS,M.P.SCHWALM,C.A.FERRER, JRNL AUTH 2 D.H.DREWRY,S.KNAPP,A.CHAIKUAD JRNL TITL CRYSTAL STRUCTURE AND INHIBITOR IDENTIFICATIONS REVEAL JRNL TITL 2 TARGETING OPPORTUNITY FOR THE ATYPICAL MAPK KINASE ERK3. JRNL REF INT J MOL SCI V. 21 2020 JRNL REFN ESSN 1422-0067 JRNL PMID 33114754 JRNL DOI 10.3390/IJMS21217953 REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.88 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 29536 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.224 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1564 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.25 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.31 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2153 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2910 REMARK 3 BIN FREE R VALUE SET COUNT : 85 REMARK 3 BIN FREE R VALUE : 0.3340 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4123 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 77 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.59000 REMARK 3 B22 (A**2) : 1.59000 REMARK 3 B33 (A**2) : -3.18000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.293 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.223 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.181 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 15.517 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.914 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4212 ; 0.008 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3928 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5744 ; 1.460 ; 1.630 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8992 ; 1.262 ; 1.567 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 562 ; 7.078 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 142 ;34.441 ;24.014 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 626 ;14.044 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;25.995 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 599 ; 0.064 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4739 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 841 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 21 320 B 21 320 7266 0.110 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 13 A 320 REMARK 3 ORIGIN FOR THE GROUP (A): 32.8683 1.2587 23.6738 REMARK 3 T TENSOR REMARK 3 T11: 0.0242 T22: 0.0472 REMARK 3 T33: 0.0456 T12: -0.0093 REMARK 3 T13: 0.0200 T23: 0.0126 REMARK 3 L TENSOR REMARK 3 L11: 1.1689 L22: 2.5372 REMARK 3 L33: 2.4809 L12: 0.8086 REMARK 3 L13: 0.7381 L23: 1.2870 REMARK 3 S TENSOR REMARK 3 S11: 0.0215 S12: 0.0597 S13: 0.1879 REMARK 3 S21: 0.0329 S22: 0.0325 S23: 0.0928 REMARK 3 S31: -0.1543 S32: -0.0173 S33: -0.0540 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 21 B 401 REMARK 3 ORIGIN FOR THE GROUP (A): 57.7149 -9.3650 45.8685 REMARK 3 T TENSOR REMARK 3 T11: 0.0591 T22: 0.0647 REMARK 3 T33: 0.0253 T12: 0.0387 REMARK 3 T13: -0.0224 T23: -0.0023 REMARK 3 L TENSOR REMARK 3 L11: 3.2237 L22: 2.2016 REMARK 3 L33: 2.4538 L12: -0.4743 REMARK 3 L13: -0.7354 L23: -0.0342 REMARK 3 S TENSOR REMARK 3 S11: -0.0965 S12: -0.0476 S13: -0.1414 REMARK 3 S21: 0.0392 S22: 0.1582 S23: 0.1107 REMARK 3 S31: 0.0805 S32: -0.2213 S33: -0.0617 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 7AQB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-OCT-20. REMARK 100 THE DEPOSITION ID IS D_1292111899. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUL-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31175 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 48.880 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 10.70 REMARK 200 R MERGE (I) : 0.15600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.20 REMARK 200 R MERGE FOR SHELL (I) : 2.48400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1ERK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.8M MGSO4; 0.1M MES, PH 6.7, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 90.53300 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 41.65850 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 41.65850 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 135.79950 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 41.65850 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 41.65850 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 45.26650 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 41.65850 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 41.65850 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 135.79950 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 41.65850 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 41.65850 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 45.26650 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 90.53300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 8 REMARK 465 MET A 9 REMARK 465 ASN A 10 REMARK 465 ILE A 11 REMARK 465 HIS A 12 REMARK 465 GLY A 27 REMARK 465 CYS A 28 REMARK 465 GLY A 29 REMARK 465 ASP A 94 REMARK 465 VAL A 95 REMARK 465 GLY A 96 REMARK 465 SER A 97 REMARK 465 PRO A 180 REMARK 465 HIS A 181 REMARK 465 TYR A 182 REMARK 465 SER A 183 REMARK 465 HIS A 184 REMARK 465 LYS A 185 REMARK 465 GLY A 186 REMARK 465 PHE A 321 REMARK 465 PRO A 322 REMARK 465 MET A 323 REMARK 465 ASP A 324 REMARK 465 GLU A 325 REMARK 465 PRO A 326 REMARK 465 ILE A 327 REMARK 465 SER B 8 REMARK 465 MET B 9 REMARK 465 ASN B 10 REMARK 465 ILE B 11 REMARK 465 HIS B 12 REMARK 465 GLY B 13 REMARK 465 PHE B 14 REMARK 465 ASP B 15 REMARK 465 LEU B 16 REMARK 465 GLY B 17 REMARK 465 SER B 18 REMARK 465 ARG B 19 REMARK 465 TYR B 20 REMARK 465 GLY B 27 REMARK 465 CYS B 28 REMARK 465 GLY B 29 REMARK 465 ASP B 94 REMARK 465 VAL B 95 REMARK 465 GLY B 96 REMARK 465 SER B 97 REMARK 465 LEU B 98 REMARK 465 THR B 99 REMARK 465 GLU B 100 REMARK 465 LEU B 101 REMARK 465 ASN B 102 REMARK 465 GLY B 173 REMARK 465 LEU B 174 REMARK 465 ALA B 175 REMARK 465 ARG B 176 REMARK 465 ILE B 177 REMARK 465 MET B 178 REMARK 465 ASP B 179 REMARK 465 PRO B 180 REMARK 465 HIS B 181 REMARK 465 TYR B 182 REMARK 465 SER B 183 REMARK 465 HIS B 184 REMARK 465 LYS B 185 REMARK 465 GLY B 186 REMARK 465 PHE B 321 REMARK 465 PRO B 322 REMARK 465 MET B 323 REMARK 465 ASP B 324 REMARK 465 GLU B 325 REMARK 465 PRO B 326 REMARK 465 ILE B 327 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE A 14 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP A 15 CG OD1 OD2 REMARK 470 MET A 21 SD CE REMARK 470 LEU A 23 CD1 CD2 REMARK 470 LYS A 24 CD CE NZ REMARK 470 LEU A 26 CG CD1 CD2 REMARK 470 LEU A 33 CG CD1 CD2 REMARK 470 ASP A 41 CG OD1 OD2 REMARK 470 ASP A 43 CG OD1 OD2 REMARK 470 LYS A 44 CG CD CE NZ REMARK 470 ARG A 45 NE CZ NH1 NH2 REMARK 470 THR A 54 OG1 CG2 REMARK 470 ASP A 55 CG OD1 OD2 REMARK 470 GLN A 57 CG CD OE1 NE2 REMARK 470 LYS A 60 CG CD CE NZ REMARK 470 ARG A 70 CD NE CZ NH1 NH2 REMARK 470 ARG A 71 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 73 CG OD1 OD2 REMARK 470 GLU A 82 CD OE1 OE2 REMARK 470 GLN A 90 CG CD OE1 NE2 REMARK 470 THR A 92 OG1 CG2 REMARK 470 ASP A 93 CG OD1 OD2 REMARK 470 LEU A 98 CG CD1 CD2 REMARK 470 THR A 99 OG1 CG2 REMARK 470 GLU A 100 CG CD OE1 OE2 REMARK 470 GLU A 120 CD OE1 OE2 REMARK 470 GLN A 121 CD OE1 NE2 REMARK 470 GLU A 127 CD OE1 OE2 REMARK 470 ARG A 138 CD NE CZ NH1 NH2 REMARK 470 ASN A 147 OD1 ND2 REMARK 470 ARG A 151 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 154 NZ REMARK 470 GLU A 163 CG CD OE1 OE2 REMARK 470 ASP A 164 CG OD1 OD2 REMARK 470 ARG A 176 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 177 CG1 CD1 REMARK 470 ASP A 179 CG OD1 OD2 REMARK 470 HIS A 187 CG ND1 CD2 CE1 NE2 REMARK 470 LEU A 188 CG CD1 CD2 REMARK 470 GLU A 190 CG CD OE1 OE2 REMARK 470 ARG A 198 NH1 NH2 REMARK 470 ARG A 201 CD NE CZ NH1 NH2 REMARK 470 TYR A 209 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 211 CG CD CE NZ REMARK 470 LYS A 229 CE NZ REMARK 470 GLU A 253 CG CD OE1 OE2 REMARK 470 GLU A 254 OE1 OE2 REMARK 470 ARG A 256 NE CZ NH1 NH2 REMARK 470 GLN A 257 CD OE1 NE2 REMARK 470 GLU A 258 CD OE1 OE2 REMARK 470 LEU A 260 CG CD1 CD2 REMARK 470 ASN A 269 OD1 ND2 REMARK 470 GLU A 273 OE1 OE2 REMARK 470 ARG A 287 NE CZ NH1 NH2 REMARK 470 GLU A 288 CG CD OE1 OE2 REMARK 470 ASP A 291 OD1 OD2 REMARK 470 GLU A 294 CD OE1 OE2 REMARK 470 ILE A 296 CD1 REMARK 470 MET A 302 SD CE REMARK 470 GLU A 308 CG CD OE1 OE2 REMARK 470 MET B 21 CG SD CE REMARK 470 ASP B 22 CG OD1 OD2 REMARK 470 LYS B 24 CG CD CE NZ REMARK 470 LEU B 26 CG CD1 CD2 REMARK 470 VAL B 38 CG1 CG2 REMARK 470 ASN B 40 CG OD1 ND2 REMARK 470 ASP B 41 CG OD1 OD2 REMARK 470 CYS B 42 SG REMARK 470 ASP B 43 CG OD1 OD2 REMARK 470 LYS B 44 CG CD CE NZ REMARK 470 ARG B 45 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 50 CE NZ REMARK 470 ASP B 55 CG OD1 OD2 REMARK 470 GLN B 57 CG CD OE1 NE2 REMARK 470 VAL B 59 CG1 CG2 REMARK 470 LYS B 60 CG CD CE NZ REMARK 470 HIS B 61 CG ND1 CD2 CE1 NE2 REMARK 470 LEU B 63 CG CD1 CD2 REMARK 470 ARG B 64 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 65 CG CD OE1 OE2 REMARK 470 ILE B 66 CG1 CG2 CD1 REMARK 470 LYS B 67 CG CD CE NZ REMARK 470 ILE B 68 CG1 CG2 CD1 REMARK 470 ILE B 69 CG1 CG2 CD1 REMARK 470 ARG B 70 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 71 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 75 OD1 OD2 REMARK 470 LYS B 79 CG CD CE NZ REMARK 470 GLU B 82 CG CD OE1 OE2 REMARK 470 SER B 87 OG REMARK 470 SER B 89 OG REMARK 470 LEU B 91 CG CD1 CD2 REMARK 470 THR B 92 OG1 CG2 REMARK 470 ASP B 93 CG OD1 OD2 REMARK 470 SER B 103 OG REMARK 470 TYR B 105 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG B 138 CD NE CZ NH1 NH2 REMARK 470 LYS B 141 CD CE NZ REMARK 470 ARG B 151 CZ NH1 NH2 REMARK 470 GLU B 163 CG CD OE1 OE2 REMARK 470 LYS B 168 CD CE NZ REMARK 470 HIS B 187 CG ND1 CD2 CE1 NE2 REMARK 470 ARG B 198 CZ NH1 NH2 REMARK 470 ASN B 207 OD1 ND2 REMARK 470 LYS B 211 CE NZ REMARK 470 LYS B 229 CE NZ REMARK 470 HIS B 236 ND1 CD2 CE1 NE2 REMARK 470 MET B 241 CE REMARK 470 GLU B 246 CD OE1 OE2 REMARK 470 ARG B 256 CD NE CZ NH1 NH2 REMARK 470 GLN B 257 CD OE1 NE2 REMARK 470 VAL B 265 CG1 CG2 REMARK 470 TYR B 266 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ILE B 267 CG1 CG2 CD1 REMARK 470 ARG B 268 CG CD NE CZ NH1 NH2 REMARK 470 ASN B 269 CG OD1 ND2 REMARK 470 ASP B 270 CG OD1 OD2 REMARK 470 MET B 271 SD CE REMARK 470 GLU B 273 CG CD OE1 OE2 REMARK 470 HIS B 275 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 276 CE NZ REMARK 470 GLN B 280 CG CD OE1 NE2 REMARK 470 ARG B 287 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 288 CG CD OE1 OE2 REMARK 470 GLU B 308 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 54 -63.65 -93.40 REMARK 500 ARG A 151 -8.04 79.92 REMARK 500 ASP A 171 72.87 52.63 REMARK 500 ALA A 233 67.79 -100.62 REMARK 500 THR B 54 -62.47 -92.12 REMARK 500 ARG B 151 -12.25 81.32 REMARK 500 ASP B 171 73.98 49.63 REMARK 500 ALA B 233 63.78 -104.57 REMARK 500 MET B 271 -152.58 -88.84 REMARK 500 LEU B 297 57.99 -90.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 157 OD1 REMARK 620 2 ASP A 171 OD2 78.8 REMARK 620 N 1 DBREF 7AQB A 9 327 UNP Q16659 MK06_HUMAN 9 327 DBREF 7AQB B 9 327 UNP Q16659 MK06_HUMAN 9 327 SEQADV 7AQB SER A 8 UNP Q16659 EXPRESSION TAG SEQADV 7AQB VAL A 290 UNP Q16659 LEU 290 VARIANT SEQADV 7AQB SER B 8 UNP Q16659 EXPRESSION TAG SEQADV 7AQB VAL B 290 UNP Q16659 LEU 290 VARIANT SEQRES 1 A 320 SER MET ASN ILE HIS GLY PHE ASP LEU GLY SER ARG TYR SEQRES 2 A 320 MET ASP LEU LYS PRO LEU GLY CYS GLY GLY ASN GLY LEU SEQRES 3 A 320 VAL PHE SER ALA VAL ASP ASN ASP CYS ASP LYS ARG VAL SEQRES 4 A 320 ALA ILE LYS LYS ILE VAL LEU THR ASP PRO GLN SER VAL SEQRES 5 A 320 LYS HIS ALA LEU ARG GLU ILE LYS ILE ILE ARG ARG LEU SEQRES 6 A 320 ASP HIS ASP ASN ILE VAL LYS VAL PHE GLU ILE LEU GLY SEQRES 7 A 320 PRO SER GLY SER GLN LEU THR ASP ASP VAL GLY SER LEU SEQRES 8 A 320 THR GLU LEU ASN SER VAL TYR ILE VAL GLN GLU TYR MET SEQRES 9 A 320 GLU THR ASP LEU ALA ASN VAL LEU GLU GLN GLY PRO LEU SEQRES 10 A 320 LEU GLU GLU HIS ALA ARG LEU PHE MET TYR GLN LEU LEU SEQRES 11 A 320 ARG GLY LEU LYS TYR ILE HIS SER ALA ASN VAL LEU HIS SEQRES 12 A 320 ARG ASP LEU LYS PRO ALA ASN LEU PHE ILE ASN THR GLU SEQRES 13 A 320 ASP LEU VAL LEU LYS ILE GLY ASP PHE GLY LEU ALA ARG SEQRES 14 A 320 ILE MET ASP PRO HIS TYR SER HIS LYS GLY HIS LEU SER SEQRES 15 A 320 GLU GLY LEU VAL THR LYS TRP TYR ARG SER PRO ARG LEU SEQRES 16 A 320 LEU LEU SER PRO ASN ASN TYR THR LYS ALA ILE ASP MET SEQRES 17 A 320 TRP ALA ALA GLY CYS ILE PHE ALA GLU MET LEU THR GLY SEQRES 18 A 320 LYS THR LEU PHE ALA GLY ALA HIS GLU LEU GLU GLN MET SEQRES 19 A 320 GLN LEU ILE LEU GLU SER ILE PRO VAL VAL HIS GLU GLU SEQRES 20 A 320 ASP ARG GLN GLU LEU LEU SER VAL ILE PRO VAL TYR ILE SEQRES 21 A 320 ARG ASN ASP MET THR GLU PRO HIS LYS PRO LEU THR GLN SEQRES 22 A 320 LEU LEU PRO GLY ILE SER ARG GLU ALA VAL ASP PHE LEU SEQRES 23 A 320 GLU GLN ILE LEU THR PHE SER PRO MET ASP ARG LEU THR SEQRES 24 A 320 ALA GLU GLU ALA LEU SER HIS PRO TYR MET SER ILE TYR SEQRES 25 A 320 SER PHE PRO MET ASP GLU PRO ILE SEQRES 1 B 320 SER MET ASN ILE HIS GLY PHE ASP LEU GLY SER ARG TYR SEQRES 2 B 320 MET ASP LEU LYS PRO LEU GLY CYS GLY GLY ASN GLY LEU SEQRES 3 B 320 VAL PHE SER ALA VAL ASP ASN ASP CYS ASP LYS ARG VAL SEQRES 4 B 320 ALA ILE LYS LYS ILE VAL LEU THR ASP PRO GLN SER VAL SEQRES 5 B 320 LYS HIS ALA LEU ARG GLU ILE LYS ILE ILE ARG ARG LEU SEQRES 6 B 320 ASP HIS ASP ASN ILE VAL LYS VAL PHE GLU ILE LEU GLY SEQRES 7 B 320 PRO SER GLY SER GLN LEU THR ASP ASP VAL GLY SER LEU SEQRES 8 B 320 THR GLU LEU ASN SER VAL TYR ILE VAL GLN GLU TYR MET SEQRES 9 B 320 GLU THR ASP LEU ALA ASN VAL LEU GLU GLN GLY PRO LEU SEQRES 10 B 320 LEU GLU GLU HIS ALA ARG LEU PHE MET TYR GLN LEU LEU SEQRES 11 B 320 ARG GLY LEU LYS TYR ILE HIS SER ALA ASN VAL LEU HIS SEQRES 12 B 320 ARG ASP LEU LYS PRO ALA ASN LEU PHE ILE ASN THR GLU SEQRES 13 B 320 ASP LEU VAL LEU LYS ILE GLY ASP PHE GLY LEU ALA ARG SEQRES 14 B 320 ILE MET ASP PRO HIS TYR SER HIS LYS GLY HIS LEU SER SEQRES 15 B 320 GLU GLY LEU VAL THR LYS TRP TYR ARG SER PRO ARG LEU SEQRES 16 B 320 LEU LEU SER PRO ASN ASN TYR THR LYS ALA ILE ASP MET SEQRES 17 B 320 TRP ALA ALA GLY CYS ILE PHE ALA GLU MET LEU THR GLY SEQRES 18 B 320 LYS THR LEU PHE ALA GLY ALA HIS GLU LEU GLU GLN MET SEQRES 19 B 320 GLN LEU ILE LEU GLU SER ILE PRO VAL VAL HIS GLU GLU SEQRES 20 B 320 ASP ARG GLN GLU LEU LEU SER VAL ILE PRO VAL TYR ILE SEQRES 21 B 320 ARG ASN ASP MET THR GLU PRO HIS LYS PRO LEU THR GLN SEQRES 22 B 320 LEU LEU PRO GLY ILE SER ARG GLU ALA VAL ASP PHE LEU SEQRES 23 B 320 GLU GLN ILE LEU THR PHE SER PRO MET ASP ARG LEU THR SEQRES 24 B 320 ALA GLU GLU ALA LEU SER HIS PRO TYR MET SER ILE TYR SEQRES 25 B 320 SER PHE PRO MET ASP GLU PRO ILE HET MG A 401 1 HET EDO B 401 4 HETNAM MG MAGNESIUM ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 MG MG 2+ FORMUL 4 EDO C2 H6 O2 FORMUL 5 HOH *77(H2 O) HELIX 1 AA1 ASP A 55 ARG A 71 1 17 HELIX 2 AA2 LEU A 115 GLN A 121 1 7 HELIX 3 AA3 LEU A 125 ALA A 146 1 22 HELIX 4 AA4 LYS A 154 ALA A 156 5 3 HELIX 5 AA5 SER A 189 VAL A 193 5 5 HELIX 6 AA6 SER A 199 SER A 205 1 7 HELIX 7 AA7 THR A 210 GLY A 228 1 19 HELIX 8 AA8 HIS A 236 ILE A 248 1 13 HELIX 9 AA9 HIS A 252 SER A 261 1 10 HELIX 10 AB1 PRO A 264 MET A 271 1 8 HELIX 11 AB2 PRO A 277 LEU A 282 1 6 HELIX 12 AB3 SER A 286 GLN A 295 1 10 HELIX 13 AB4 SER A 300 ARG A 304 5 5 HELIX 14 AB5 THR A 306 HIS A 313 1 8 HELIX 15 AB6 HIS A 313 ILE A 318 1 6 HELIX 16 AB7 ASP B 55 LEU B 72 1 18 HELIX 17 AB8 LEU B 115 GLN B 121 1 7 HELIX 18 AB9 LEU B 125 ALA B 146 1 22 HELIX 19 AC1 LYS B 154 ALA B 156 5 3 HELIX 20 AC2 SER B 189 VAL B 193 5 5 HELIX 21 AC3 SER B 199 SER B 205 1 7 HELIX 22 AC4 THR B 210 GLY B 228 1 19 HELIX 23 AC5 HIS B 236 ILE B 248 1 13 HELIX 24 AC6 HIS B 252 ILE B 263 1 12 HELIX 25 AC7 ILE B 263 ARG B 268 1 6 HELIX 26 AC8 PRO B 277 LEU B 282 1 6 HELIX 27 AC9 SER B 286 GLN B 295 1 10 HELIX 28 AD1 SER B 300 ARG B 304 5 5 HELIX 29 AD2 THR B 306 HIS B 313 1 8 HELIX 30 AD3 HIS B 313 ILE B 318 1 6 SHEET 1 AA1 6 PHE A 14 LEU A 16 0 SHEET 2 AA1 6 TYR A 20 PRO A 25 -1 O LEU A 23 N PHE A 14 SHEET 3 AA1 6 VAL A 34 ASP A 39 -1 O VAL A 38 N MET A 21 SHEET 4 AA1 6 ARG A 45 VAL A 52 -1 O VAL A 46 N ALA A 37 SHEET 5 AA1 6 SER A 103 GLU A 109 -1 O VAL A 104 N ILE A 51 SHEET 6 AA1 6 VAL A 80 LEU A 84 -1 N GLU A 82 O VAL A 107 SHEET 1 AA2 3 THR A 113 ASP A 114 0 SHEET 2 AA2 3 LEU A 158 ASN A 161 -1 O ILE A 160 N THR A 113 SHEET 3 AA2 3 VAL A 166 ILE A 169 -1 O LYS A 168 N PHE A 159 SHEET 1 AA3 2 VAL A 148 LEU A 149 0 SHEET 2 AA3 2 ARG A 176 ILE A 177 -1 O ARG A 176 N LEU A 149 SHEET 1 AA4 5 LYS B 24 PRO B 25 0 SHEET 2 AA4 5 VAL B 34 ASP B 39 -1 O SER B 36 N LYS B 24 SHEET 3 AA4 5 LYS B 44 ILE B 51 -1 O VAL B 46 N ALA B 37 SHEET 4 AA4 5 VAL B 104 GLU B 109 -1 O VAL B 104 N ILE B 51 SHEET 5 AA4 5 VAL B 80 LEU B 84 -1 N LEU B 84 O TYR B 105 SHEET 1 AA5 3 THR B 113 ASP B 114 0 SHEET 2 AA5 3 LEU B 158 ASN B 161 -1 O ILE B 160 N THR B 113 SHEET 3 AA5 3 VAL B 166 ILE B 169 -1 O LYS B 168 N PHE B 159 LINK OD1 ASN A 157 MG MG A 401 1555 1555 2.25 LINK OD2 ASP A 171 MG MG A 401 1555 1555 2.32 CRYST1 83.317 83.317 181.066 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012002 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012002 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005523 0.00000