HEADER HYDROLASE 26-OCT-20 7ARP TITLE NATIVE L-2-HALOACID DEHALOGENASE FROM ZOBELLIA GALACTANIVORANS COMPND MOL_ID: 1; COMPND 2 MOLECULE: (S)-2-HALOACID DEHALOGENASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.8.1.2; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ZOBELLIA GALACTANIVORANS (STRAIN DSM 12802 / SOURCE 3 CCUG 47099 / CIP 106680 / NCIMB 13871 / DSIJ); SOURCE 4 ORGANISM_TAXID: 63186; SOURCE 5 STRAIN: DSM 12802 / CCUG 47099 / CIP 106680 / NCIMB 13871 / DSIJ; SOURCE 6 GENE: DHLB, ZOBELLIA_4183; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS HALOACID DEHALOGENASE, ROSSMANN FOLD, CYTOPLASMIC, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR E.GRIGORIAN,T.RORET,M.CZJZEK,C.LEBLANC,L.DELAGE REVDAT 3 31-JAN-24 7ARP 1 REMARK REVDAT 2 21-DEC-22 7ARP 1 JRNL REVDAT 1 08-SEP-21 7ARP 0 JRNL AUTH E.GRIGORIAN,T.RORET,M.CZJZEK,C.LEBLANC,L.DELAGE JRNL TITL X-RAY STRUCTURE AND MECHANISM OF ZGHAD, A L-2-HALOACID JRNL TITL 2 DEHALOGENASE FROM THE MARINE FLAVOBACTERIUM ZOBELLIA JRNL TITL 3 GALACTANIVORANS. JRNL REF PROTEIN SCI. E4540 2022 JRNL REFN ESSN 1469-896X JRNL PMID 36502283 JRNL DOI 10.1002/PRO.4540 REMARK 2 REMARK 2 RESOLUTION. 1.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.03 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.390 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 41583 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.156 REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : 0.177 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 2092 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.0270 - 4.3886 1.00 2822 161 0.0000 0.0000 REMARK 3 2 4.3886 - 3.4838 1.00 2674 154 0.1388 0.1534 REMARK 3 3 3.4838 - 3.0435 1.00 2659 144 0.1502 0.1577 REMARK 3 4 3.0435 - 2.7653 1.00 2627 144 0.1470 0.1876 REMARK 3 5 2.7653 - 2.5671 1.00 2648 138 0.1455 0.1591 REMARK 3 6 2.5671 - 2.4158 1.00 2608 152 0.1466 0.1790 REMARK 3 7 2.4158 - 2.2948 1.00 2593 140 0.1374 0.1503 REMARK 3 8 2.2948 - 2.1949 1.00 2632 147 0.1383 0.2009 REMARK 3 9 2.1949 - 2.1104 1.00 2595 148 0.1476 0.1859 REMARK 3 10 2.1104 - 2.0376 1.00 2613 129 0.1589 0.1753 REMARK 3 11 2.0376 - 1.9739 1.00 2585 139 0.1613 0.2475 REMARK 3 12 1.9739 - 1.9174 1.00 2617 120 0.1686 0.2265 REMARK 3 13 1.9174 - 1.8670 1.00 2598 125 0.1822 0.2337 REMARK 3 14 1.8670 - 1.8214 1.00 2599 127 0.2121 0.2873 REMARK 3 15 1.8214 - 1.7800 1.00 2621 124 0.2673 0.3234 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.380 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.55 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 17 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 7:22 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.132 12.081 -8.491 REMARK 3 T TENSOR REMARK 3 T11: 0.1380 T22: 0.1372 REMARK 3 T33: 0.1798 T12: 0.0070 REMARK 3 T13: 0.0270 T23: -0.0010 REMARK 3 L TENSOR REMARK 3 L11: 0.7149 L22: 0.5742 REMARK 3 L33: 0.6074 L12: -0.3665 REMARK 3 L13: 0.1244 L23: 0.4108 REMARK 3 S TENSOR REMARK 3 S11: -0.0579 S12: -0.0077 S13: -0.1953 REMARK 3 S21: -0.0371 S22: 0.0018 S23: -0.1216 REMARK 3 S31: 0.0919 S32: 0.2024 S33: -0.0033 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 23:37 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.455 29.242 -18.909 REMARK 3 T TENSOR REMARK 3 T11: 0.1795 T22: 0.1897 REMARK 3 T33: 0.3021 T12: -0.0147 REMARK 3 T13: 0.0541 T23: 0.0029 REMARK 3 L TENSOR REMARK 3 L11: 0.5055 L22: 3.6445 REMARK 3 L33: 0.3922 L12: 0.5988 REMARK 3 L13: -0.2786 L23: 0.5061 REMARK 3 S TENSOR REMARK 3 S11: 0.0412 S12: -0.2353 S13: -0.0668 REMARK 3 S21: 0.1653 S22: 0.0337 S23: -0.9917 REMARK 3 S31: -0.0954 S32: 0.3779 S33: 0.0727 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 38:55 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.707 30.590 -15.882 REMARK 3 T TENSOR REMARK 3 T11: 0.1739 T22: 0.1463 REMARK 3 T33: 0.1351 T12: -0.0206 REMARK 3 T13: 0.0102 T23: -0.0021 REMARK 3 L TENSOR REMARK 3 L11: 0.1434 L22: 0.3711 REMARK 3 L33: 0.6463 L12: 0.0832 REMARK 3 L13: -0.1507 L23: 0.3118 REMARK 3 S TENSOR REMARK 3 S11: 0.1000 S12: 0.0089 S13: -0.1313 REMARK 3 S21: -0.0368 S22: -0.0399 S23: -0.0405 REMARK 3 S31: 0.2087 S32: -0.0828 S33: 0.0001 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 56:76 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.806 30.975 -23.516 REMARK 3 T TENSOR REMARK 3 T11: 0.1876 T22: 0.1467 REMARK 3 T33: 0.1326 T12: -0.0200 REMARK 3 T13: 0.0246 T23: -0.0046 REMARK 3 L TENSOR REMARK 3 L11: 0.5720 L22: 0.4058 REMARK 3 L33: 0.7929 L12: -0.3559 REMARK 3 L13: 0.3887 L23: -0.0043 REMARK 3 S TENSOR REMARK 3 S11: 0.1525 S12: 0.1760 S13: 0.1288 REMARK 3 S21: -0.2494 S22: -0.0271 S23: -0.0205 REMARK 3 S31: 0.0047 S32: -0.0363 S33: 0.0003 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN A AND RESID 77:94 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.976 28.742 -28.264 REMARK 3 T TENSOR REMARK 3 T11: 0.3582 T22: 0.1982 REMARK 3 T33: 0.2501 T12: -0.0157 REMARK 3 T13: 0.1250 T23: -0.0107 REMARK 3 L TENSOR REMARK 3 L11: 0.2785 L22: 1.0112 REMARK 3 L33: 0.2445 L12: -0.4349 REMARK 3 L13: 0.2520 L23: -0.4634 REMARK 3 S TENSOR REMARK 3 S11: 0.0731 S12: 0.1686 S13: -0.0047 REMARK 3 S21: -0.7370 S22: 0.0283 S23: -0.2455 REMARK 3 S31: 0.0233 S32: 0.2534 S33: 0.0747 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN A AND RESID 95:111 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.579 6.290 -9.735 REMARK 3 T TENSOR REMARK 3 T11: 0.1790 T22: 0.1804 REMARK 3 T33: 0.2537 T12: 0.0216 REMARK 3 T13: 0.0264 T23: -0.0060 REMARK 3 L TENSOR REMARK 3 L11: 0.7922 L22: 0.6101 REMARK 3 L33: 0.3837 L12: 0.6286 REMARK 3 L13: -0.1749 L23: 0.0536 REMARK 3 S TENSOR REMARK 3 S11: 0.0042 S12: -0.0102 S13: -0.2195 REMARK 3 S21: -0.0450 S22: -0.1249 S23: -0.6161 REMARK 3 S31: 0.1596 S32: 0.2317 S33: 0.0264 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN A AND RESID 112:123 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.898 8.589 -11.370 REMARK 3 T TENSOR REMARK 3 T11: 0.1996 T22: 0.1633 REMARK 3 T33: 0.1995 T12: -0.0055 REMARK 3 T13: 0.0340 T23: 0.0010 REMARK 3 L TENSOR REMARK 3 L11: 0.2724 L22: 0.3484 REMARK 3 L33: 0.4126 L12: -0.2171 REMARK 3 L13: -0.0211 L23: 0.2867 REMARK 3 S TENSOR REMARK 3 S11: 0.0826 S12: 0.0450 S13: -0.1219 REMARK 3 S21: 0.1198 S22: -0.1127 S23: -0.0528 REMARK 3 S31: -0.1297 S32: 0.0191 S33: 0.0001 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: ( CHAIN A AND RESID 124:141 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.800 7.900 -19.031 REMARK 3 T TENSOR REMARK 3 T11: 0.2042 T22: 0.1669 REMARK 3 T33: 0.1841 T12: 0.0213 REMARK 3 T13: 0.0501 T23: -0.0220 REMARK 3 L TENSOR REMARK 3 L11: 0.2044 L22: 0.1917 REMARK 3 L33: 0.1376 L12: 0.0387 REMARK 3 L13: -0.1035 L23: 0.1067 REMARK 3 S TENSOR REMARK 3 S11: 0.0847 S12: 0.1344 S13: -0.1151 REMARK 3 S21: -0.2777 S22: -0.1449 S23: -0.0348 REMARK 3 S31: 0.1828 S32: -0.0541 S33: 0.0000 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: ( CHAIN A AND RESID 142:155 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.866 17.741 -15.972 REMARK 3 T TENSOR REMARK 3 T11: 0.2224 T22: 0.2294 REMARK 3 T33: 0.2123 T12: -0.0122 REMARK 3 T13: -0.0104 T23: 0.0050 REMARK 3 L TENSOR REMARK 3 L11: 0.0974 L22: 0.0896 REMARK 3 L33: 0.2012 L12: 0.0835 REMARK 3 L13: 0.0710 L23: 0.0082 REMARK 3 S TENSOR REMARK 3 S11: -0.0378 S12: 0.1372 S13: -0.0048 REMARK 3 S21: -0.3043 S22: 0.0173 S23: 0.1202 REMARK 3 S31: -0.1085 S32: -0.1282 S33: -0.0000 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: ( CHAIN A AND RESID 156:179 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.717 12.450 -6.281 REMARK 3 T TENSOR REMARK 3 T11: 0.1718 T22: 0.1607 REMARK 3 T33: 0.1992 T12: -0.0129 REMARK 3 T13: 0.0211 T23: -0.0014 REMARK 3 L TENSOR REMARK 3 L11: 0.2524 L22: 0.3806 REMARK 3 L33: 0.4023 L12: -0.3103 REMARK 3 L13: -0.0377 L23: 0.0206 REMARK 3 S TENSOR REMARK 3 S11: -0.0759 S12: -0.0010 S13: -0.1437 REMARK 3 S21: 0.0390 S22: 0.0786 S23: 0.1072 REMARK 3 S31: 0.0305 S32: -0.0782 S33: 0.0001 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: ( CHAIN A AND RESID 180:227 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.312 16.992 0.390 REMARK 3 T TENSOR REMARK 3 T11: 0.1649 T22: 0.1572 REMARK 3 T33: 0.1436 T12: 0.0104 REMARK 3 T13: -0.0126 T23: 0.0031 REMARK 3 L TENSOR REMARK 3 L11: 0.7252 L22: 0.6947 REMARK 3 L33: 0.5809 L12: -0.2493 REMARK 3 L13: -0.1595 L23: 0.3838 REMARK 3 S TENSOR REMARK 3 S11: -0.0559 S12: -0.0749 S13: -0.0423 REMARK 3 S21: 0.2176 S22: 0.0809 S23: -0.0834 REMARK 3 S31: 0.0728 S32: 0.1388 S33: -0.0001 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: ( CHAIN B AND RESID 7:55 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.182 43.422 -9.589 REMARK 3 T TENSOR REMARK 3 T11: 0.1380 T22: 0.1476 REMARK 3 T33: 0.1445 T12: 0.0040 REMARK 3 T13: 0.0160 T23: -0.0082 REMARK 3 L TENSOR REMARK 3 L11: 0.5309 L22: 0.8032 REMARK 3 L33: 1.1348 L12: -0.2742 REMARK 3 L13: 0.7717 L23: -0.4391 REMARK 3 S TENSOR REMARK 3 S11: -0.0061 S12: 0.0638 S13: 0.1221 REMARK 3 S21: -0.0221 S22: -0.0153 S23: -0.1220 REMARK 3 S31: -0.0411 S32: 0.0199 S33: 0.0001 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: ( CHAIN B AND RESID 56:76 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.043 34.736 -0.251 REMARK 3 T TENSOR REMARK 3 T11: 0.1617 T22: 0.1782 REMARK 3 T33: 0.1903 T12: -0.0051 REMARK 3 T13: -0.0010 T23: 0.0029 REMARK 3 L TENSOR REMARK 3 L11: 0.3775 L22: 0.4676 REMARK 3 L33: 0.7789 L12: 0.3826 REMARK 3 L13: -0.0628 L23: 0.1844 REMARK 3 S TENSOR REMARK 3 S11: 0.1440 S12: -0.0480 S13: -0.1468 REMARK 3 S21: 0.1083 S22: -0.0657 S23: -0.0645 REMARK 3 S31: 0.0292 S32: -0.1086 S33: -0.0001 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: ( CHAIN B AND RESID 77:94 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.655 42.177 3.789 REMARK 3 T TENSOR REMARK 3 T11: 0.2435 T22: 0.2237 REMARK 3 T33: 0.2463 T12: -0.0397 REMARK 3 T13: -0.0026 T23: 0.0010 REMARK 3 L TENSOR REMARK 3 L11: 0.3084 L22: 0.2811 REMARK 3 L33: 0.3589 L12: 0.2698 REMARK 3 L13: 0.1470 L23: 0.0278 REMARK 3 S TENSOR REMARK 3 S11: 0.2072 S12: -0.1098 S13: -0.0927 REMARK 3 S21: 0.1203 S22: -0.1667 S23: 0.0942 REMARK 3 S31: 0.1493 S32: -0.0546 S33: 0.0001 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: ( CHAIN B AND RESID 95:111 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.554 60.847 -14.668 REMARK 3 T TENSOR REMARK 3 T11: 0.2363 T22: 0.2035 REMARK 3 T33: 0.2587 T12: -0.0165 REMARK 3 T13: 0.0002 T23: 0.0123 REMARK 3 L TENSOR REMARK 3 L11: 0.3076 L22: 0.4321 REMARK 3 L33: 0.2717 L12: 0.0642 REMARK 3 L13: -0.2140 L23: 0.1098 REMARK 3 S TENSOR REMARK 3 S11: -0.2047 S12: 0.0224 S13: 0.4055 REMARK 3 S21: -0.1204 S22: 0.0643 S23: -0.3832 REMARK 3 S31: -0.2979 S32: -0.0428 S33: -0.0002 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: ( CHAIN B AND RESID 112:211 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.719 47.211 -14.301 REMARK 3 T TENSOR REMARK 3 T11: 0.1278 T22: 0.1697 REMARK 3 T33: 0.1541 T12: 0.0008 REMARK 3 T13: 0.0149 T23: 0.0074 REMARK 3 L TENSOR REMARK 3 L11: 0.4067 L22: 2.1635 REMARK 3 L33: 1.4601 L12: -0.4705 REMARK 3 L13: -0.1107 L23: 0.3707 REMARK 3 S TENSOR REMARK 3 S11: 0.0534 S12: 0.0074 S13: 0.0222 REMARK 3 S21: -0.0253 S22: 0.0050 S23: 0.0860 REMARK 3 S31: -0.0326 S32: -0.1247 S33: 0.0002 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: ( CHAIN B AND RESID 212:227 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.914 57.338 -26.677 REMARK 3 T TENSOR REMARK 3 T11: 0.3390 T22: 0.3305 REMARK 3 T33: 0.2183 T12: -0.0056 REMARK 3 T13: 0.0372 T23: 0.0467 REMARK 3 L TENSOR REMARK 3 L11: 0.2209 L22: 0.2166 REMARK 3 L33: 0.4970 L12: 0.1987 REMARK 3 L13: -0.0006 L23: 0.1354 REMARK 3 S TENSOR REMARK 3 S11: -0.0115 S12: 0.7662 S13: 0.2510 REMARK 3 S21: -0.7612 S22: -0.0610 S23: -0.2404 REMARK 3 S31: -0.2353 S32: 0.0186 S33: -0.0105 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 18 THROUGH 301 OR REMARK 3 RESID 401)) REMARK 3 SELECTION : CHAIN B REMARK 3 ATOM PAIRS NUMBER : 2043 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7ARP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-OCT-20. REMARK 100 THE DEPOSITION ID IS D_1292111937. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JUN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97986 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.1 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41657 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.780 REMARK 200 RESOLUTION RANGE LOW (A) : 45.030 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.50 REMARK 200 R MERGE (I) : 0.09800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.82 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.70 REMARK 200 R MERGE FOR SHELL (I) : 0.74500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 2YML REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 31% PEG 3350, 0.33 M POTASSIUM REMARK 280 THIOCYANATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.76750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.87100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.41300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.87100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.76750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.41300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -50.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -10 REMARK 465 GLY A -9 REMARK 465 SER A -8 REMARK 465 SER A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 GLY A 0 REMARK 465 SER A 1 REMARK 465 SER A 2 REMARK 465 ALA A 3 REMARK 465 LYS A 4 REMARK 465 VAL A 5 REMARK 465 MET B -10 REMARK 465 GLY B -9 REMARK 465 SER B -8 REMARK 465 SER B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 GLY B 0 REMARK 465 SER B 1 REMARK 465 SER B 2 REMARK 465 ALA B 3 REMARK 465 LYS B 4 REMARK 465 VAL B 5 REMARK 465 LYS B 6 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU B 26 O HOH B 401 1.86 REMARK 500 N LYS A 6 O HOH A 401 1.89 REMARK 500 O HOH A 621 O HOH B 583 1.90 REMARK 500 OE1 GLU A 155 O HOH A 402 1.93 REMARK 500 O HOH B 537 O HOH B 584 1.94 REMARK 500 O HOH B 445 O HOH B 593 1.95 REMARK 500 O HOH A 615 O HOH A 632 1.95 REMARK 500 OE1 GLU A 17 O HOH A 403 1.96 REMARK 500 O HOH B 569 O HOH B 607 1.99 REMARK 500 O HOH A 520 O HOH A 624 1.99 REMARK 500 OE2 GLU A 17 O HOH A 403 2.08 REMARK 500 O LEU B 55 O HOH B 402 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 489 O HOH B 508 4455 1.82 REMARK 500 O HOH B 568 O HOH B 577 4465 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 17 -45.66 71.29 REMARK 500 GLU B 17 -47.59 70.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SCN A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SCN B 302 DBREF 7ARP A 2 227 UNP G0L7V6 G0L7V6_ZOBGA 2 227 DBREF 7ARP B 2 227 UNP G0L7V6 G0L7V6_ZOBGA 2 227 SEQADV 7ARP MET A -10 UNP G0L7V6 INITIATING METHIONINE SEQADV 7ARP GLY A -9 UNP G0L7V6 EXPRESSION TAG SEQADV 7ARP SER A -8 UNP G0L7V6 EXPRESSION TAG SEQADV 7ARP SER A -7 UNP G0L7V6 EXPRESSION TAG SEQADV 7ARP HIS A -6 UNP G0L7V6 EXPRESSION TAG SEQADV 7ARP HIS A -5 UNP G0L7V6 EXPRESSION TAG SEQADV 7ARP HIS A -4 UNP G0L7V6 EXPRESSION TAG SEQADV 7ARP HIS A -3 UNP G0L7V6 EXPRESSION TAG SEQADV 7ARP HIS A -2 UNP G0L7V6 EXPRESSION TAG SEQADV 7ARP HIS A -1 UNP G0L7V6 EXPRESSION TAG SEQADV 7ARP GLY A 0 UNP G0L7V6 EXPRESSION TAG SEQADV 7ARP SER A 1 UNP G0L7V6 EXPRESSION TAG SEQADV 7ARP MET B -10 UNP G0L7V6 INITIATING METHIONINE SEQADV 7ARP GLY B -9 UNP G0L7V6 EXPRESSION TAG SEQADV 7ARP SER B -8 UNP G0L7V6 EXPRESSION TAG SEQADV 7ARP SER B -7 UNP G0L7V6 EXPRESSION TAG SEQADV 7ARP HIS B -6 UNP G0L7V6 EXPRESSION TAG SEQADV 7ARP HIS B -5 UNP G0L7V6 EXPRESSION TAG SEQADV 7ARP HIS B -4 UNP G0L7V6 EXPRESSION TAG SEQADV 7ARP HIS B -3 UNP G0L7V6 EXPRESSION TAG SEQADV 7ARP HIS B -2 UNP G0L7V6 EXPRESSION TAG SEQADV 7ARP HIS B -1 UNP G0L7V6 EXPRESSION TAG SEQADV 7ARP GLY B 0 UNP G0L7V6 EXPRESSION TAG SEQADV 7ARP SER B 1 UNP G0L7V6 EXPRESSION TAG SEQRES 1 A 238 MET GLY SER SER HIS HIS HIS HIS HIS HIS GLY SER SER SEQRES 2 A 238 ALA LYS VAL LYS LYS PRO GLU LEU LEU ILE PHE ASP VAL SEQRES 3 A 238 ASN GLU THR LEU LEU ASP MET GLY PRO LEU GLU ASN ALA SEQRES 4 A 238 ILE ASN GLU SER LEU ASN SER GLU HIS ALA PHE SER LEU SEQRES 5 A 238 TRP PHE ARG THR LEU LEU HIS TYR SER LEU THR GLU THR SEQRES 6 A 238 LEU THR GLY ASN TYR VAL ASP PHE GLY THR ILE GLY LYS SEQRES 7 A 238 ALA THR LEU LYS MET THR MET ARG LYS PHE GLY LYS ASN SEQRES 8 A 238 LEU SER GLU ASP ARG LEU ASP ALA ILE LEU GLY ASN ILE SEQRES 9 A 238 LYS LYS LEU PRO ALA HIS GLU ASP VAL LYS GLU GLY LEU SEQRES 10 A 238 LYS MET LEU LYS GLU ALA GLN ILE LYS LEU VAL ALA LEU SEQRES 11 A 238 SER ASN SER ASN GLY LYS LEU LEU ASN ALA GLN LEU GLN SEQRES 12 A 238 PHE ALA GLY LEU ALA ASP TYR PHE ASP ALA ILE PHE SER SEQRES 13 A 238 VAL GLU ALA VAL GLY ARG TYR LYS PRO GLU LEU ALA SER SEQRES 14 A 238 TYR ARG ALA VAL LEU GLU THR MET LYS VAL PRO ALA GLU SEQRES 15 A 238 ASN THR MET MET VAL ALA ALA HIS GLY TRP ASP ILE LEU SEQRES 16 A 238 GLY ALA LYS ARG ALA GLY LEU ARG THR ALA PHE VAL ALA SEQRES 17 A 238 ARG GLU GLY HIS ALA ILE TYR PRO LEU ASP GLY THR PRO SEQRES 18 A 238 GLU LEU GLU ALA LYS THR VAL LEU GLU VAL ALA ARG THR SEQRES 19 A 238 LEU LEU LYS ASN SEQRES 1 B 238 MET GLY SER SER HIS HIS HIS HIS HIS HIS GLY SER SER SEQRES 2 B 238 ALA LYS VAL LYS LYS PRO GLU LEU LEU ILE PHE ASP VAL SEQRES 3 B 238 ASN GLU THR LEU LEU ASP MET GLY PRO LEU GLU ASN ALA SEQRES 4 B 238 ILE ASN GLU SER LEU ASN SER GLU HIS ALA PHE SER LEU SEQRES 5 B 238 TRP PHE ARG THR LEU LEU HIS TYR SER LEU THR GLU THR SEQRES 6 B 238 LEU THR GLY ASN TYR VAL ASP PHE GLY THR ILE GLY LYS SEQRES 7 B 238 ALA THR LEU LYS MET THR MET ARG LYS PHE GLY LYS ASN SEQRES 8 B 238 LEU SER GLU ASP ARG LEU ASP ALA ILE LEU GLY ASN ILE SEQRES 9 B 238 LYS LYS LEU PRO ALA HIS GLU ASP VAL LYS GLU GLY LEU SEQRES 10 B 238 LYS MET LEU LYS GLU ALA GLN ILE LYS LEU VAL ALA LEU SEQRES 11 B 238 SER ASN SER ASN GLY LYS LEU LEU ASN ALA GLN LEU GLN SEQRES 12 B 238 PHE ALA GLY LEU ALA ASP TYR PHE ASP ALA ILE PHE SER SEQRES 13 B 238 VAL GLU ALA VAL GLY ARG TYR LYS PRO GLU LEU ALA SER SEQRES 14 B 238 TYR ARG ALA VAL LEU GLU THR MET LYS VAL PRO ALA GLU SEQRES 15 B 238 ASN THR MET MET VAL ALA ALA HIS GLY TRP ASP ILE LEU SEQRES 16 B 238 GLY ALA LYS ARG ALA GLY LEU ARG THR ALA PHE VAL ALA SEQRES 17 B 238 ARG GLU GLY HIS ALA ILE TYR PRO LEU ASP GLY THR PRO SEQRES 18 B 238 GLU LEU GLU ALA LYS THR VAL LEU GLU VAL ALA ARG THR SEQRES 19 B 238 LEU LEU LYS ASN HET PO4 A 301 5 HET SCN A 302 3 HET PO4 B 301 5 HET SCN B 302 3 HETNAM PO4 PHOSPHATE ION HETNAM SCN THIOCYANATE ION FORMUL 3 PO4 2(O4 P 3-) FORMUL 4 SCN 2(C N S 1-) FORMUL 7 HOH *473(H2 O) HELIX 1 AA1 MET A 22 LEU A 33 1 12 HELIX 2 AA2 HIS A 37 THR A 56 1 20 HELIX 3 AA3 ASP A 61 PHE A 77 1 17 HELIX 4 AA4 SER A 82 GLY A 91 1 10 HELIX 5 AA5 ASN A 92 LYS A 95 5 4 HELIX 6 AA6 ASP A 101 ALA A 112 1 12 HELIX 7 AA7 ASN A 123 ALA A 134 1 12 HELIX 8 AA8 LEU A 136 PHE A 140 5 5 HELIX 9 AA9 GLU A 155 LYS A 167 1 13 HELIX 10 AB1 PRO A 169 GLU A 171 5 3 HELIX 11 AB2 HIS A 179 ALA A 189 1 11 HELIX 12 AB3 THR A 216 LYS A 226 1 11 HELIX 13 AB4 MET B 22 ASN B 34 1 13 HELIX 14 AB5 HIS B 37 THR B 56 1 20 HELIX 15 AB6 ASP B 61 PHE B 77 1 17 HELIX 16 AB7 SER B 82 GLY B 91 1 10 HELIX 17 AB8 ASN B 92 LYS B 95 5 4 HELIX 18 AB9 ASP B 101 ALA B 112 1 12 HELIX 19 AC1 ASN B 123 ALA B 134 1 12 HELIX 20 AC2 LEU B 136 PHE B 140 5 5 HELIX 21 AC3 GLU B 155 LYS B 167 1 13 HELIX 22 AC4 PRO B 169 GLU B 171 5 3 HELIX 23 AC5 HIS B 179 ALA B 189 1 11 HELIX 24 AC6 THR B 216 LYS B 226 1 11 SHEET 1 AA1 6 ALA A 142 SER A 145 0 SHEET 2 AA1 6 LYS A 115 SER A 120 1 N ALA A 118 O PHE A 144 SHEET 3 AA1 6 LEU A 10 PHE A 13 1 N LEU A 11 O LYS A 115 SHEET 4 AA1 6 THR A 173 ALA A 177 1 O VAL A 176 N ILE A 12 SHEET 5 AA1 6 ARG A 192 VAL A 196 1 O ARG A 192 N MET A 175 SHEET 6 AA1 6 LEU A 212 ALA A 214 1 O LEU A 212 N PHE A 195 SHEET 1 AA2 6 ALA B 142 SER B 145 0 SHEET 2 AA2 6 LYS B 115 SER B 120 1 N ALA B 118 O PHE B 144 SHEET 3 AA2 6 LEU B 10 PHE B 13 1 N LEU B 11 O LYS B 115 SHEET 4 AA2 6 THR B 173 ALA B 177 1 O VAL B 176 N ILE B 12 SHEET 5 AA2 6 ARG B 192 VAL B 196 1 O ALA B 194 N MET B 175 SHEET 6 AA2 6 LEU B 212 ALA B 214 1 O LEU B 212 N PHE B 195 CISPEP 1 LYS A 153 PRO A 154 0 6.56 CISPEP 2 LYS B 153 PRO B 154 0 6.91 SITE 1 AC1 8 ARG A 44 GLY A 180 HIS A 201 ALA A 202 SITE 2 AC1 8 HOH A 411 TYR B 49 MET B 72 LYS B 76 SITE 1 AC2 5 ASP A 14 ASN A 16 ASN A 121 LYS A 153 SITE 2 AC2 5 HOH A 476 SITE 1 AC3 9 TYR A 49 MET A 72 LYS A 76 ARG B 44 SITE 2 AC3 9 HIS B 179 GLY B 180 HIS B 201 ALA B 202 SITE 3 AC3 9 HOH B 414 SITE 1 AC4 6 ASP B 14 ASN B 16 SER B 120 ASN B 121 SITE 2 AC4 6 LYS B 153 HOH B 467 CRYST1 59.535 68.826 103.742 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016797 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014529 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009639 0.00000