HEADER HYDROLASE 28-OCT-20 7AT0 TITLE STRUCTURE OF THE HORMONE-SENSITIVE LIPASE LIKE ESTD11 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ESTD11; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: UNCULTURED BACTERIUM; SOURCE 3 ORGANISM_TAXID: 77133; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PET22 KEYWDS ESTERASE HORMONE-SENSITIVE LIPASE METAGENOME LIBRARY CRYSTAL KEYWDS 2 STRUCTURE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR V.MIGUEL-RUANO,I.RIVERA,J.A.HERMOSO REVDAT 4 31-JAN-24 7AT0 1 REMARK REVDAT 3 02-FEB-22 7AT0 1 REMARK REVDAT 2 17-MAR-21 7AT0 1 JRNL REVDAT 1 03-MAR-21 7AT0 0 JRNL AUTH V.MIGUEL-RUANO,I.RIVERA,J.RAJKOVIC,K.KNAPIK,A.TORRADO, JRNL AUTH 2 J.M.OTERO,E.BENEVENTI,M.BECERRA,M.SANCHEZ-COSTA,A.HIDALGO, JRNL AUTH 3 J.BERENGUER,M.I.GONZALEZ-SISO,J.CRUCES,M.L.RUA,J.A.HERMOSO JRNL TITL BIOCHEMICAL AND STRUCTURAL CHARACTERIZATION OF A NOVEL JRNL TITL 2 THERMOPHILIC ESTERASE ESTD11 PROVIDE CATALYTIC INSIGHTS FOR JRNL TITL 3 THE HSL FAMILY. JRNL REF COMPUT STRUCT BIOTECHNOL J V. 19 1214 2021 JRNL REFN ESSN 2001-0370 JRNL PMID 33680362 JRNL DOI 10.1016/J.CSBJ.2021.01.047 REMARK 2 REMARK 2 RESOLUTION. 1.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.51 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 165932 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.124 REMARK 3 R VALUE (WORKING SET) : 0.123 REMARK 3 FREE R VALUE : 0.150 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 8727 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.23 REMARK 3 REFLECTION IN BIN (WORKING SET) : 12147 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.98 REMARK 3 BIN R VALUE (WORKING SET) : 0.2180 REMARK 3 BIN FREE R VALUE SET COUNT : 636 REMARK 3 BIN FREE R VALUE : 0.2440 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4486 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 34 REMARK 3 SOLVENT ATOMS : 591 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.23000 REMARK 3 B22 (A**2) : 0.10000 REMARK 3 B33 (A**2) : -0.33000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.033 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.034 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.024 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.227 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.983 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.978 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5133 ; 0.012 ; 0.018 REMARK 3 BOND LENGTHS OTHERS (A): 4892 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7061 ; 1.581 ; 1.890 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11311 ; 1.264 ; 2.931 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 696 ; 5.548 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 211 ;31.599 ;22.701 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 838 ;12.432 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 57 ;21.050 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 798 ; 0.111 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6017 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1052 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2646 ; 1.591 ; 1.335 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2647 ; 1.603 ; 1.337 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3388 ; 1.990 ; 2.012 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3389 ; 2.000 ; 2.013 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2487 ; 2.905 ; 1.704 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2476 ; 2.794 ; 1.690 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3674 ; 3.364 ; 2.422 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5988 ; 3.700 ;18.285 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5828 ; 3.332 ;17.513 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 10025 ; 2.541 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.30 REMARK 3 ION PROBE RADIUS : 0.70 REMARK 3 SHRINKAGE RADIUS : 0.70 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 3 U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7AT0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-OCT-20. REMARK 100 THE DEPOSITION ID IS D_1292112029. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-MAY-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 174770 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.200 REMARK 200 RESOLUTION RANGE LOW (A) : 48.330 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.90 REMARK 200 R MERGE (I) : 0.11800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.22 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.40 REMARK 200 R MERGE FOR SHELL (I) : 0.99400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4XVC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3,2M SODIUM FORMATE + 0,1M CITRATE PH REMARK 280 5., VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.94150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.49450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.08400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 72.49450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.94150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.08400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN B 296 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 734 O HOH A 832 1.87 REMARK 500 O HOH B 1189 O HOH B 1250 1.91 REMARK 500 O GLY B 161 O HOH B 1001 1.92 REMARK 500 O HOH B 1003 O HOH B 1191 1.94 REMARK 500 O HOH B 1258 O HOH B 1289 2.05 REMARK 500 O HOH B 1244 O HOH B 1282 2.08 REMARK 500 O HOH A 697 O HOH B 1006 2.12 REMARK 500 O ALA B 189 O HOH B 1002 2.12 REMARK 500 O HOH A 611 O HOH A 830 2.14 REMARK 500 O HOH B 1202 O HOH B 1260 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 809 O HOH B 1270 4555 1.17 REMARK 500 O HOH B 1142 O HOH B 1211 3555 1.83 REMARK 500 N ALA B 189 O HOH B 1211 3555 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 158 CZ ARG A 158 NH2 0.091 REMARK 500 GLN A 296 C GLN A 296 OXT 0.161 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 158 NE - CZ - NH1 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG A 158 NE - CZ - NH2 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG B 158 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 144 -124.14 62.95 REMARK 500 ALA A 237 54.41 -95.77 REMARK 500 ASP A 265 -2.14 71.95 REMARK 500 ASP A 265 -2.14 72.56 REMARK 500 SER B 144 -123.45 61.75 REMARK 500 VAL B 190 -52.17 -124.69 REMARK 500 ASP B 191 111.34 -31.02 REMARK 500 ALA B 237 54.47 -98.53 REMARK 500 ASP B 265 -1.05 72.75 REMARK 500 ASP B 265 -1.05 70.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 901 DISTANCE = 6.61 ANGSTROMS REMARK 525 HOH A 902 DISTANCE = 6.69 ANGSTROMS REMARK 525 HOH B1288 DISTANCE = 5.87 ANGSTROMS REMARK 525 HOH B1289 DISTANCE = 6.29 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IPH A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 903 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 904 DBREF 7AT0 A 2 296 PDB 7AT0 7AT0 2 296 DBREF 7AT0 B 2 296 PDB 7AT0 7AT0 2 296 SEQRES 1 A 295 ALA SER GLU ALA LEU THR MET ILE VAL ASN LEU LEU ARG SEQRES 2 A 295 SER GLN ARG PRO LEU GLN GLU PRO THR VAL GLU GLN MET SEQRES 3 A 295 ARG ALA GLY LEU GLU ALA MET ALA GLN MET SER PRO LEU SEQRES 4 A 295 PRO ALA ASP VAL GLU LEU THR THR VAL ASP ALA GLY GLY SEQRES 5 A 295 VAL PRO GLY ALA TRP VAL ARG VAL PRO GLU SER ASP PRO SEQRES 6 A 295 ASP ARG VAL VAL LEU TYR LEU HIS GLY GLY GLY TYR VAL SEQRES 7 A 295 ILE GLY SER ILE ARG THR HIS ARG ASP LEU ALA GLN ARG SEQRES 8 A 295 ILE ALA ARG ALA ALA ARG CYS ARG VAL LEU LEU ILE ASP SEQRES 9 A 295 TYR ARG LEU ALA PRO GLU HIS PRO HIS PRO ALA ALA VAL SEQRES 10 A 295 GLU ASP SER THR ARG ALA TYR ARG TRP LEU LEU GLU THR SEQRES 11 A 295 GLY SER ASP PRO LYS ARG MET ALA ILE ALA GLY ASP SER SEQRES 12 A 295 ALA GLY GLY GLY LEU THR VAL ALA THR LEU VAL ALA LEU SEQRES 13 A 295 ARG ASP ALA GLY VAL PRO LEU PRO ALA ALA ALA VAL CYS SEQRES 14 A 295 LEU SER PRO TRP VAL ASP LEU GLU GLY ILE GLY GLU SER SEQRES 15 A 295 MET THR THR LYS ALA ALA VAL ASP PRO MET VAL GLN ARG SEQRES 16 A 295 GLU PRO LEU LEU ARG MET ALA SER MET TYR LEU ALA GLY SEQRES 17 A 295 GLN ASP PRO ARG THR PRO LEU ALA ALA PRO LEU TYR ALA SEQRES 18 A 295 ASP LEU ARG GLY LEU PRO PRO LEU LEU ILE GLN VAL GLY SEQRES 19 A 295 THR ALA GLU THR LEU LEU ASP ASP SER VAL ARG LEU ALA SEQRES 20 A 295 GLU ARG ALA ARG ALA ALA GLY VAL GLN VAL THR LEU GLU SEQRES 21 A 295 PRO TRP GLU ASP MET ILE HIS VAL TRP GLN ALA PHE ALA SEQRES 22 A 295 ALA MET LEU PRO GLU GLY GLN GLN ALA ILE GLU ARG ILE SEQRES 23 A 295 GLY GLU PHE LEU ARG GLN HIS TRP GLN SEQRES 1 B 295 ALA SER GLU ALA LEU THR MET ILE VAL ASN LEU LEU ARG SEQRES 2 B 295 SER GLN ARG PRO LEU GLN GLU PRO THR VAL GLU GLN MET SEQRES 3 B 295 ARG ALA GLY LEU GLU ALA MET ALA GLN MET SER PRO LEU SEQRES 4 B 295 PRO ALA ASP VAL GLU LEU THR THR VAL ASP ALA GLY GLY SEQRES 5 B 295 VAL PRO GLY ALA TRP VAL ARG VAL PRO GLU SER ASP PRO SEQRES 6 B 295 ASP ARG VAL VAL LEU TYR LEU HIS GLY GLY GLY TYR VAL SEQRES 7 B 295 ILE GLY SER ILE ARG THR HIS ARG ASP LEU ALA GLN ARG SEQRES 8 B 295 ILE ALA ARG ALA ALA ARG CYS ARG VAL LEU LEU ILE ASP SEQRES 9 B 295 TYR ARG LEU ALA PRO GLU HIS PRO HIS PRO ALA ALA VAL SEQRES 10 B 295 GLU ASP SER THR ARG ALA TYR ARG TRP LEU LEU GLU THR SEQRES 11 B 295 GLY SER ASP PRO LYS ARG MET ALA ILE ALA GLY ASP SER SEQRES 12 B 295 ALA GLY GLY GLY LEU THR VAL ALA THR LEU VAL ALA LEU SEQRES 13 B 295 ARG ASP ALA GLY VAL PRO LEU PRO ALA ALA ALA VAL CYS SEQRES 14 B 295 LEU SER PRO TRP VAL ASP LEU GLU GLY ILE GLY GLU SER SEQRES 15 B 295 MET THR THR LYS ALA ALA VAL ASP PRO MET VAL GLN ARG SEQRES 16 B 295 GLU PRO LEU LEU ARG MET ALA SER MET TYR LEU ALA GLY SEQRES 17 B 295 GLN ASP PRO ARG THR PRO LEU ALA ALA PRO LEU TYR ALA SEQRES 18 B 295 ASP LEU ARG GLY LEU PRO PRO LEU LEU ILE GLN VAL GLY SEQRES 19 B 295 THR ALA GLU THR LEU LEU ASP ASP SER VAL ARG LEU ALA SEQRES 20 B 295 GLU ARG ALA ARG ALA ALA GLY VAL GLN VAL THR LEU GLU SEQRES 21 B 295 PRO TRP GLU ASP MET ILE HIS VAL TRP GLN ALA PHE ALA SEQRES 22 B 295 ALA MET LEU PRO GLU GLY GLN GLN ALA ILE GLU ARG ILE SEQRES 23 B 295 GLY GLU PHE LEU ARG GLN HIS TRP GLN HET FMT A 501 3 HET FMT A 502 3 HET FMT A 503 3 HET IPH A 504 7 HET FMT A 505 3 HET FMT A 506 3 HET FMT B 901 3 HET FMT B 902 3 HET FMT B 903 3 HET FMT B 904 3 HETNAM FMT FORMIC ACID HETNAM IPH PHENOL FORMUL 3 FMT 9(C H2 O2) FORMUL 6 IPH C6 H6 O FORMUL 13 HOH *591(H2 O) HELIX 1 AA1 GLU A 4 ARG A 17 1 14 HELIX 2 AA2 PRO A 18 GLU A 21 5 4 HELIX 3 AA3 THR A 23 GLN A 36 1 14 HELIX 4 AA4 SER A 82 ARG A 98 1 17 HELIX 5 AA5 PRO A 115 THR A 131 1 17 HELIX 6 AA6 ASP A 134 LYS A 136 5 3 HELIX 7 AA7 SER A 144 ALA A 160 1 17 HELIX 8 AA8 GLY A 181 LYS A 187 1 7 HELIX 9 AA9 GLN A 195 ALA A 208 1 14 HELIX 10 AB1 ALA A 218 ALA A 222 5 5 HELIX 11 AB2 LEU A 240 ALA A 254 1 15 HELIX 12 AB3 VAL A 269 ALA A 274 5 6 HELIX 13 AB4 LEU A 277 GLN A 296 1 20 HELIX 14 AB5 SER B 3 ARG B 17 1 15 HELIX 15 AB6 PRO B 18 GLU B 21 5 4 HELIX 16 AB7 THR B 23 GLN B 36 1 14 HELIX 17 AB8 SER B 82 ARG B 98 1 17 HELIX 18 AB9 PRO B 115 THR B 131 1 17 HELIX 19 AC1 ASP B 134 LYS B 136 5 3 HELIX 20 AC2 SER B 144 ALA B 160 1 17 HELIX 21 AC3 GLU B 182 LYS B 187 1 6 HELIX 22 AC4 GLN B 195 ALA B 208 1 14 HELIX 23 AC5 ALA B 218 ALA B 222 5 5 HELIX 24 AC6 LEU B 240 ALA B 254 1 15 HELIX 25 AC7 VAL B 269 ALA B 274 5 6 HELIX 26 AC8 LEU B 277 TRP B 295 1 19 SHEET 1 AA1 8 GLU A 45 ASP A 50 0 SHEET 2 AA1 8 PRO A 55 ARG A 60 -1 O TRP A 58 N THR A 47 SHEET 3 AA1 8 CYS A 99 ILE A 104 -1 O LEU A 103 N ALA A 57 SHEET 4 AA1 8 ASP A 65 LEU A 73 1 N VAL A 70 O LEU A 102 SHEET 5 AA1 8 MET A 138 ASP A 143 1 O ALA A 141 N LEU A 73 SHEET 6 AA1 8 ALA A 167 LEU A 171 1 O LEU A 171 N GLY A 142 SHEET 7 AA1 8 LEU A 230 GLY A 235 1 O LEU A 231 N CYS A 170 SHEET 8 AA1 8 VAL A 258 TRP A 263 1 O GLU A 261 N ILE A 232 SHEET 1 AA2 8 GLU B 45 ALA B 51 0 SHEET 2 AA2 8 VAL B 54 ARG B 60 -1 O ARG B 60 N GLU B 45 SHEET 3 AA2 8 CYS B 99 ILE B 104 -1 O LEU B 103 N ALA B 57 SHEET 4 AA2 8 ASP B 65 LEU B 73 1 N VAL B 70 O LEU B 102 SHEET 5 AA2 8 MET B 138 ASP B 143 1 O ALA B 141 N LEU B 73 SHEET 6 AA2 8 ALA B 167 LEU B 171 1 O LEU B 171 N GLY B 142 SHEET 7 AA2 8 LEU B 230 GLY B 235 1 O LEU B 231 N CYS B 170 SHEET 8 AA2 8 VAL B 258 TRP B 263 1 O GLU B 261 N ILE B 232 CISPEP 1 ALA A 109 PRO A 110 0 -1.16 CISPEP 2 HIS A 114 PRO A 115 0 9.73 CISPEP 3 ALA B 109 PRO B 110 0 1.55 CISPEP 4 HIS B 114 PRO B 115 0 8.70 SITE 1 AC1 9 PRO A 22 THR A 23 VAL A 24 ARG A 201 SITE 2 AC1 9 MET A 205 HOH A 650 VAL B 258 THR B 259 SITE 3 AC1 9 HOH B1156 SITE 1 AC2 4 THR A 48 HOH A 658 HOH A 682 HOH B1282 SITE 1 AC3 3 PRO A 41 ARG A 92 HOH A 685 SITE 1 AC4 4 ASN A 11 ARG A 14 SER A 15 ASP B 223 SITE 1 AC5 4 TRP A 58 ARG A 60 ARG A 100 HOH A 618 SITE 1 AC6 3 GLY A 52 ARG A 123 TRP A 127 SITE 1 AC7 4 ARG B 126 GLU B 130 HOH B1084 HOH B1135 SITE 1 AC8 4 SER B 3 ALA B 208 GLY B 209 PRO B 278 SITE 1 AC9 1 GLN B 16 SITE 1 AD1 5 SER B 82 ILE B 83 ARG B 84 ASP B 105 SITE 2 AD1 5 HOH B1021 CRYST1 47.883 80.168 144.989 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020884 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012474 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006897 0.00000