data_7ATG # _entry.id 7ATG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.384 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7ATG pdb_00007atg 10.2210/pdb7atg/pdb WWPDB D_1292109990 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-08-11 2 'Structure model' 1 1 2021-10-06 3 'Structure model' 1 2 2024-01-31 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Structure summary' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' pdbx_contact_author 3 2 'Structure model' pdbx_database_proc 4 2 'Structure model' pdbx_seq_map_depositor_info 5 3 'Structure model' chem_comp_atom 6 3 'Structure model' chem_comp_bond 7 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.pdbx_database_id_PubMed' 5 2 'Structure model' '_citation.title' 6 2 'Structure model' '_pdbx_seq_map_depositor_info.one_letter_code_mod' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7ATG _pdbx_database_status.recvd_initial_deposition_date 2020-10-30 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 4HIG unspecified PDB . 4HIF unspecified PDB . 4R15 unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Drozdzal, P.' 1 0000-0001-8431-1305 'Gilski, M.' 2 0000-0002-3941-9947 'Jaskolski, M.' 3 0000-0003-1587-6489 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Acta Crystallogr.,Sect.B' _citation.journal_id_ASTM ACSBDA _citation.journal_id_CSD ? _citation.journal_id_ISSN 2052-5206 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 77 _citation.language ? _citation.page_first 331 _citation.page_last 338 _citation.title 'Crystal structure of Z-DNA in complex with the polyamine putrescine and potassium cations at ultra-high resolution.' _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1107/S2052520621002663 _citation.pdbx_database_id_PubMed 34096514 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Drozdzal, P.' 1 ? primary 'Gilski, M.' 2 ? primary 'Jaskolski, M.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*GP*CP*GP*CP*G)-3') ; 1810.205 2 ? ? ? ? 2 non-polymer nat 'POTASSIUM ION' 39.098 1 ? ? ? ? 3 non-polymer nat 4-azaniumylbutylazanium 90.167 1 ? ? ? ? 4 water nat water 18.015 123 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DC)(DG)(DC)(DG)(DC)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CGCGCG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'POTASSIUM ION' K 3 4-azaniumylbutylazanium 58I 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DG n 1 3 DC n 1 4 DG n 1 5 DC n 1 6 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 6 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 58I non-polymer n 4-azaniumylbutylazanium 'Butane-1,4-diyldiammonium; Putrescinium' 'C4 H14 N2 2' 90.167 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 HOH non-polymer . WATER ? 'H2 O' 18.015 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC DC A . n A 1 2 DG 2 2 2 DG DG A . n A 1 3 DC 3 3 3 DC DC A . n A 1 4 DG 4 4 4 DG DG A . n A 1 5 DC 5 5 5 DC DC A . n A 1 6 DG 6 6 6 DG DG A . n B 1 1 DC 1 7 7 DC DC B . n B 1 2 DG 2 8 8 DG DG B . n B 1 3 DC 3 9 9 DC DC B . n B 1 4 DG 4 10 10 DG DG B . n B 1 5 DC 5 11 11 DC DC B . n B 1 6 DG 6 12 12 DG DG B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 K 1 101 1 K K A . D 3 58I 1 101 1 58I PUT B . E 4 HOH 1 201 79 HOH HOH A . E 4 HOH 2 202 94 HOH HOH A . E 4 HOH 3 203 48 HOH HOH A . E 4 HOH 4 204 15 HOH HOH A . E 4 HOH 5 205 93 HOH HOH A . E 4 HOH 6 206 100 HOH HOH A . E 4 HOH 7 207 104 HOH HOH A . E 4 HOH 8 208 83 HOH HOH A . E 4 HOH 9 209 86 HOH HOH A . E 4 HOH 10 210 98 HOH HOH A . E 4 HOH 11 211 97 HOH HOH A . E 4 HOH 12 212 40 HOH HOH A . E 4 HOH 13 213 66 HOH HOH A . E 4 HOH 14 214 84 HOH HOH A . E 4 HOH 15 215 21 HOH HOH A . E 4 HOH 16 216 38 HOH HOH A . E 4 HOH 17 217 109 HOH HOH A . E 4 HOH 18 218 37 HOH HOH A . E 4 HOH 19 219 16 HOH HOH A . E 4 HOH 20 220 18 HOH HOH A . E 4 HOH 21 221 69 HOH HOH A . E 4 HOH 22 222 20 HOH HOH A . E 4 HOH 23 223 12 HOH HOH A . E 4 HOH 24 224 34 HOH HOH A . E 4 HOH 25 225 120 HOH HOH A . E 4 HOH 26 226 46 HOH HOH A . E 4 HOH 27 227 3 HOH HOH A . E 4 HOH 28 228 65 HOH HOH A . E 4 HOH 29 229 58 HOH HOH A . E 4 HOH 30 230 63 HOH HOH A . E 4 HOH 31 231 81 HOH HOH A . E 4 HOH 32 232 36 HOH HOH A . E 4 HOH 33 233 19 HOH HOH A . E 4 HOH 34 234 2 HOH HOH A . E 4 HOH 35 235 49 HOH HOH A . E 4 HOH 36 236 80 HOH HOH A . E 4 HOH 37 237 4 HOH HOH A . E 4 HOH 38 238 75 HOH HOH A . E 4 HOH 39 239 51 HOH HOH A . E 4 HOH 40 240 68 HOH HOH A . E 4 HOH 41 241 91 HOH HOH A . E 4 HOH 42 242 105 HOH HOH A . E 4 HOH 43 243 43 HOH HOH A . E 4 HOH 44 244 28 HOH HOH A . E 4 HOH 45 245 116 HOH HOH A . E 4 HOH 46 246 73 HOH HOH A . E 4 HOH 47 247 26 HOH HOH A . E 4 HOH 48 248 110 HOH HOH A . E 4 HOH 49 249 111 HOH HOH A . E 4 HOH 50 250 117 HOH HOH A . E 4 HOH 51 251 61 HOH HOH A . E 4 HOH 52 252 29 HOH HOH A . E 4 HOH 53 253 99 HOH HOH A . E 4 HOH 54 254 121 HOH HOH A . E 4 HOH 55 255 50 HOH HOH A . E 4 HOH 56 256 108 HOH HOH A . E 4 HOH 57 257 25 HOH HOH A . E 4 HOH 58 258 60 HOH HOH A . E 4 HOH 59 259 59 HOH HOH A . F 4 HOH 1 201 27 HOH HOH B . F 4 HOH 2 202 7 HOH HOH B . F 4 HOH 3 203 56 HOH HOH B . F 4 HOH 4 204 103 HOH HOH B . F 4 HOH 5 205 72 HOH HOH B . F 4 HOH 6 206 13 HOH HOH B . F 4 HOH 7 207 85 HOH HOH B . F 4 HOH 8 208 17 HOH HOH B . F 4 HOH 9 209 8 HOH HOH B . F 4 HOH 10 210 1 HOH HOH B . F 4 HOH 11 211 32 HOH HOH B . F 4 HOH 12 212 2 HOH HOH B . F 4 HOH 13 213 10 HOH HOH B . F 4 HOH 14 214 71 HOH HOH B . F 4 HOH 15 215 87 HOH HOH B . F 4 HOH 16 216 57 HOH HOH B . F 4 HOH 17 217 23 HOH HOH B . F 4 HOH 18 218 53 HOH HOH B . F 4 HOH 19 219 5 HOH HOH B . F 4 HOH 20 220 31 HOH HOH B . F 4 HOH 21 221 6 HOH HOH B . F 4 HOH 22 222 88 HOH HOH B . F 4 HOH 23 223 64 HOH HOH B . F 4 HOH 24 224 44 HOH HOH B . F 4 HOH 25 225 9 HOH HOH B . F 4 HOH 26 226 62 HOH HOH B . F 4 HOH 27 227 5 HOH HOH B . F 4 HOH 28 228 11 HOH HOH B . F 4 HOH 29 229 101 HOH HOH B . F 4 HOH 30 230 2 HOH HOH B . F 4 HOH 31 231 74 HOH HOH B . F 4 HOH 32 232 118 HOH HOH B . F 4 HOH 33 233 35 HOH HOH B . F 4 HOH 34 234 3 HOH HOH B . F 4 HOH 35 235 89 HOH HOH B . F 4 HOH 36 236 67 HOH HOH B . F 4 HOH 37 237 78 HOH HOH B . F 4 HOH 38 238 47 HOH HOH B . F 4 HOH 39 239 70 HOH HOH B . F 4 HOH 40 240 54 HOH HOH B . F 4 HOH 41 241 42 HOH HOH B . F 4 HOH 42 242 96 HOH HOH B . F 4 HOH 43 243 107 HOH HOH B . F 4 HOH 44 244 102 HOH HOH B . F 4 HOH 45 245 82 HOH HOH B . F 4 HOH 46 246 45 HOH HOH B . F 4 HOH 47 247 77 HOH HOH B . F 4 HOH 48 248 14 HOH HOH B . F 4 HOH 49 249 55 HOH HOH B . F 4 HOH 50 250 30 HOH HOH B . F 4 HOH 51 251 41 HOH HOH B . F 4 HOH 52 252 33 HOH HOH B . F 4 HOH 53 253 22 HOH HOH B . F 4 HOH 54 254 106 HOH HOH B . F 4 HOH 55 255 92 HOH HOH B . F 4 HOH 56 256 24 HOH HOH B . F 4 HOH 57 257 6 HOH HOH B . F 4 HOH 58 258 90 HOH HOH B . F 4 HOH 59 259 4 HOH HOH B . F 4 HOH 60 260 76 HOH HOH B . F 4 HOH 61 261 39 HOH HOH B . F 4 HOH 62 262 7 HOH HOH B . F 4 HOH 63 263 52 HOH HOH B . F 4 HOH 64 264 95 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? SHELXL ? ? ? . 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 7ATG _cell.details ? _cell.formula_units_Z ? _cell.length_a 17.970 _cell.length_a_esd ? _cell.length_b 31.020 _cell.length_b_esd ? _cell.length_c 43.860 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ATG _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7ATG _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.8 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 31.6 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 292 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '10%(v/v) (+/-)-2-methyl-2,4-pentanediol (MPD), 40 mM sodium cacodylate pH 6.0, 80 mM KCl, 12 mM NaCl, 14 mM putrescinium dichloride' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _diffrn.ambient_environment _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.ambient_temp_esd _diffrn.crystal_id _diffrn.crystal_support _diffrn.crystal_treatment _diffrn.details _diffrn.id _diffrn.ambient_pressure _diffrn.ambient_pressure_esd _diffrn.ambient_pressure_gt _diffrn.ambient_pressure_lt _diffrn.ambient_temp_gt _diffrn.ambient_temp_lt _diffrn.pdbx_serial_crystal_experiment ? 100 ? ? 1 ? ? ? 1 ? ? ? ? ? ? N ? 100 ? ? 1 ? ? ? 2 ? ? ? ? ? ? N # loop_ _diffrn_detector.details _diffrn_detector.detector _diffrn_detector.diffrn_id _diffrn_detector.type _diffrn_detector.area_resol_mean _diffrn_detector.dtime _diffrn_detector.pdbx_frames_total _diffrn_detector.pdbx_collection_time_total _diffrn_detector.pdbx_collection_date _diffrn_detector.pdbx_frequency ? PIXEL 1 'DECTRIS PILATUS3 S 6M' ? ? ? ? 2015-06-22 ? ? PIXEL 2 'DECTRIS PILATUS3 S 6M' ? ? ? ? 2015-06-22 ? # loop_ _diffrn_radiation.collimation _diffrn_radiation.diffrn_id _diffrn_radiation.filter_edge _diffrn_radiation.inhomogeneity _diffrn_radiation.monochromator _diffrn_radiation.polarisn_norm _diffrn_radiation.polarisn_ratio _diffrn_radiation.probe _diffrn_radiation.type _diffrn_radiation.xray_symbol _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.pdbx_wavelength_list _diffrn_radiation.pdbx_wavelength _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_analyzer _diffrn_radiation.pdbx_scattering_type ? 1 ? ? 'Si(111)' ? ? ? ? ? 1 M ? ? 'SINGLE WAVELENGTH' ? x-ray ? 2 ? ? 'Si(111)' ? ? ? ? ? 2 M ? ? 'SINGLE WAVELENGTH' ? x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.72930 1.0 2 0.7293 1.0 # loop_ _diffrn_source.current _diffrn_source.details _diffrn_source.diffrn_id _diffrn_source.power _diffrn_source.size _diffrn_source.source _diffrn_source.target _diffrn_source.type _diffrn_source.voltage _diffrn_source.take-off_angle _diffrn_source.pdbx_wavelength_list _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_synchrotron_site ? ? 1 ? ? SYNCHROTRON ? 'PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1)' ? ? 0.72930 ? 'P13 (MX1)' 'PETRA III, EMBL c/o DESY' ? ? 2 ? ? SYNCHROTRON ? 'PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1)' ? ? 0.7293 ? 'P13 (MX1)' 'PETRA III, EMBL c/o DESY' # _reflns.B_iso_Wilson_estimate 5.17 _reflns.entry_id 7ATG _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 0.60 _reflns.d_resolution_low 25.33 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 107989 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 90.5 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.7 _reflns.pdbx_Rmerge_I_obs 0.024 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 29.84 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 1.143 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.027 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 0.60 _reflns_shell.d_res_low 0.61 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.88 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1973 _reflns_shell.percent_possible_all 22.6 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.264 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 1.2 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.368 _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.999 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 36.870 _refine.B_iso_mean 6.26 _refine.B_iso_min 2.730 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ;THE REFINEMENT WAS CARRIED OUT AGAINST SEPARATE BIJVOET PAIRS. HYDROGEN ATOMS WERE ADDED AT RIDING POSITIONS. THE FINAL REFINEMENT WAS CALCULATED USING WEIGHTED FULL-MATRIX LEAST-SQUARES PROCEDURE. CONFORMATION-DEPENDENT GEOMETRICAL RESTRAINTS ON BOND LENGTHS AND BOND ANGLES FOR POLYNUCLEOTIDE CHAINS WERE GENERATED USING THE RESTRAINTLIB SERVER: http://achesym.ibch.poznan.pl/restraintlib/ ; _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7ATG _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 0.60 _refine.ls_d_res_low 25.33 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters 3962 _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 106103 _refine.ls_number_reflns_R_free 1876 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints 4374 _refine.ls_percent_reflns_obs 90.5 _refine.ls_percent_reflns_R_free 1.77 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.0888 _refine.ls_R_factor_R_free 0.0950 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.0877 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'MOEWS & KRETSINGER, J.MOL.BIOL.91(1973)201-228' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4hig _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 7ATG _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 3 _refine_analyze.occupancy_sum_hydrogen 141.29 _refine_analyze.occupancy_sum_non_hydrogen 333.73 # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 0.60 _refine_hist.d_res_low 25.33 _refine_hist.number_atoms_solvent 159 _refine_hist.number_atoms_total 406 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 12 _refine_hist.pdbx_B_iso_mean_ligand 4.95 _refine_hist.pdbx_B_iso_mean_solvent 12.20 _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 240 _refine_hist.pdbx_number_atoms_ligand 7 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.010 ? ? ? s_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.56 ? ? ? s_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.000 ? ? ? s_similar_dist ? ? 'X-RAY DIFFRACTION' ? 0.005 ? ? ? s_from_restr_planes ? ? 'X-RAY DIFFRACTION' ? 0.000 ? ? ? s_zero_chiral_vol ? ? 'X-RAY DIFFRACTION' ? 0.000 ? ? ? s_non_zero_chiral_vol ? ? 'X-RAY DIFFRACTION' ? 0.089 ? ? ? s_anti_bump_dis_restr ? ? 'X-RAY DIFFRACTION' ? 0.000 ? ? ? s_rigid_bond_adp_cmpnt ? ? 'X-RAY DIFFRACTION' ? 0.061 ? ? ? s_similar_adp_cmpnt ? ? 'X-RAY DIFFRACTION' ? 0.070 ? ? ? s_approx_iso_adps ? ? # _database_PDB_matrix.entry_id 7ATG _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _struct.entry_id 7ATG _struct.title 'Crystal structure of Z-DNA in complex with putrescinium and potassium cations at ultrahigh-resolution' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7ATG _struct_keywords.text 'Z-DNA, DNA, dual-conformation backbone; putrescinium cation; biogenic polyamines; potassium complex' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 7ATG _struct_ref.pdbx_db_accession 7ATG _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7ATG A 1 ? 6 ? 7ATG 1 ? 6 ? 1 6 2 1 7ATG B 1 ? 6 ? 7ATG 7 ? 12 ? 7 12 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 800 ? 1 MORE -6 ? 1 'SSA (A^2)' 2530 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DG 6 OP1 A ? ? 1_555 C K . K A ? A DG 6 A K 101 1_555 ? ? ? ? ? ? ? 2.715 ? ? metalc2 metalc ? ? A DG 6 "O5'" A ? ? 1_555 C K . K A ? A DG 6 A K 101 1_555 ? ? ? ? ? ? ? 3.047 ? ? metalc3 metalc ? ? C K . K A ? ? 1_555 E HOH . O ? ? A K 101 A HOH 217 1_555 ? ? ? ? ? ? ? 2.661 ? ? metalc4 metalc ? ? C K . K A ? ? 1_555 E HOH . O A ? A K 101 A HOH 248 1_555 ? ? ? ? ? ? ? 2.612 ? ? metalc5 metalc ? ? C K . K A ? ? 3_545 B DC 3 OP1 ? ? A K 101 B DC 9 1_555 ? ? ? ? ? ? ? 3.184 ? ? metalc6 metalc ? ? C K . K A ? ? 3_545 B DC 3 OP2 ? ? A K 101 B DC 9 1_555 ? ? ? ? ? ? ? 2.791 ? ? metalc7 metalc ? ? C K . K A ? ? 1_555 F HOH . O ? ? A K 101 B HOH 255 3_555 ? ? ? ? ? ? ? 3.392 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 6 N1 ? ? A DC 1 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 6 O6 ? ? A DC 1 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 6 N2 ? ? A DC 1 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 5 N3 ? ? A DG 2 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 5 O2 ? ? A DG 2 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 5 N4 ? ? A DG 2 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 3 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 3 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 3 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 3 N3 ? ? A DG 4 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 3 O2 ? ? A DG 4 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 3 N4 ? ? A DG 4 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 1 N3 ? ? A DG 6 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 1 O2 ? ? A DG 6 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 1 N4 ? ? A DG 6 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP1 A A DG 6 ? A DG 6 ? 1_555 K A C K . ? A K 101 ? 1_555 "O5'" A A DG 6 ? A DG 6 ? 1_555 49.5 ? 2 OP1 A A DG 6 ? A DG 6 ? 1_555 K A C K . ? A K 101 ? 1_555 O ? E HOH . ? A HOH 217 ? 1_555 108.8 ? 3 "O5'" A A DG 6 ? A DG 6 ? 1_555 K A C K . ? A K 101 ? 1_555 O ? E HOH . ? A HOH 217 ? 1_555 73.4 ? 4 OP1 A A DG 6 ? A DG 6 ? 1_555 K A C K . ? A K 101 ? 1_555 O A E HOH . ? A HOH 248 ? 1_555 97.1 ? 5 "O5'" A A DG 6 ? A DG 6 ? 1_555 K A C K . ? A K 101 ? 1_555 O A E HOH . ? A HOH 248 ? 1_555 123.6 ? 6 O ? E HOH . ? A HOH 217 ? 1_555 K A C K . ? A K 101 ? 1_555 O A E HOH . ? A HOH 248 ? 1_555 80.3 ? 7 OP1 A A DG 6 ? A DG 6 ? 1_555 K A C K . ? A K 101 ? 1_555 OP1 ? B DC 3 ? B DC 9 ? 1_555 15.1 ? 8 "O5'" A A DG 6 ? A DG 6 ? 1_555 K A C K . ? A K 101 ? 1_555 OP1 ? B DC 3 ? B DC 9 ? 1_555 34.5 ? 9 O ? E HOH . ? A HOH 217 ? 1_555 K A C K . ? A K 101 ? 1_555 OP1 ? B DC 3 ? B DC 9 ? 1_555 98.4 ? 10 O A E HOH . ? A HOH 248 ? 1_555 K A C K . ? A K 101 ? 1_555 OP1 ? B DC 3 ? B DC 9 ? 1_555 106.5 ? 11 OP1 A A DG 6 ? A DG 6 ? 1_555 K A C K . ? A K 101 ? 1_555 OP2 ? B DC 3 ? B DC 9 ? 1_555 19.6 ? 12 "O5'" A A DG 6 ? A DG 6 ? 1_555 K A C K . ? A K 101 ? 1_555 OP2 ? B DC 3 ? B DC 9 ? 1_555 30.2 ? 13 O ? E HOH . ? A HOH 217 ? 1_555 K A C K . ? A K 101 ? 1_555 OP2 ? B DC 3 ? B DC 9 ? 1_555 93.1 ? 14 O A E HOH . ? A HOH 248 ? 1_555 K A C K . ? A K 101 ? 1_555 OP2 ? B DC 3 ? B DC 9 ? 1_555 106.6 ? 15 OP1 ? B DC 3 ? B DC 9 ? 1_555 K A C K . ? A K 101 ? 1_555 OP2 ? B DC 3 ? B DC 9 ? 1_555 5.3 ? 16 OP1 A A DG 6 ? A DG 6 ? 1_555 K A C K . ? A K 101 ? 1_555 O ? F HOH . ? B HOH 255 ? 3_555 49.7 ? 17 "O5'" A A DG 6 ? A DG 6 ? 1_555 K A C K . ? A K 101 ? 1_555 O ? F HOH . ? B HOH 255 ? 3_555 79.6 ? 18 O ? E HOH . ? A HOH 217 ? 1_555 K A C K . ? A K 101 ? 1_555 O ? F HOH . ? B HOH 255 ? 3_555 153.0 ? 19 O A E HOH . ? A HOH 248 ? 1_555 K A C K . ? A K 101 ? 1_555 O ? F HOH . ? B HOH 255 ? 3_555 114.9 ? 20 OP1 ? B DC 3 ? B DC 9 ? 1_555 K A C K . ? A K 101 ? 1_555 O ? F HOH . ? B HOH 255 ? 3_555 56.9 ? 21 OP2 ? B DC 3 ? B DC 9 ? 1_555 K A C K . ? A K 101 ? 1_555 O ? F HOH . ? B HOH 255 ? 3_555 61.8 ? # _phasing.method MR # _pdbx_entry_details.entry_id 7ATG _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 259 ? 6.25 . 2 1 O ? B HOH 264 ? 5.85 . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 58I N2 N N N 1 58I C4 C N N 2 58I C3 C N N 3 58I C2 C N N 4 58I C1 C N N 5 58I N1 N N N 6 58I HN21 H N N 7 58I HN22 H N N 8 58I H3 H N N 9 58I H41 H N N 10 58I H42 H N N 11 58I H31 H N N 12 58I H32 H N N 13 58I H21 H N N 14 58I H22 H N N 15 58I HN11 H N N 16 58I H1 H N N 17 58I H2 H N N 18 58I HN12 H N N 19 58I H14 H N N 20 DC OP3 O N N 21 DC P P N N 22 DC OP1 O N N 23 DC OP2 O N N 24 DC "O5'" O N N 25 DC "C5'" C N N 26 DC "C4'" C N R 27 DC "O4'" O N N 28 DC "C3'" C N S 29 DC "O3'" O N N 30 DC "C2'" C N N 31 DC "C1'" C N R 32 DC N1 N N N 33 DC C2 C N N 34 DC O2 O N N 35 DC N3 N N N 36 DC C4 C N N 37 DC N4 N N N 38 DC C5 C N N 39 DC C6 C N N 40 DC HOP3 H N N 41 DC HOP2 H N N 42 DC "H5'" H N N 43 DC "H5''" H N N 44 DC "H4'" H N N 45 DC "H3'" H N N 46 DC "HO3'" H N N 47 DC "H2'" H N N 48 DC "H2''" H N N 49 DC "H1'" H N N 50 DC H41 H N N 51 DC H42 H N N 52 DC H5 H N N 53 DC H6 H N N 54 DG OP3 O N N 55 DG P P N N 56 DG OP1 O N N 57 DG OP2 O N N 58 DG "O5'" O N N 59 DG "C5'" C N N 60 DG "C4'" C N R 61 DG "O4'" O N N 62 DG "C3'" C N S 63 DG "O3'" O N N 64 DG "C2'" C N N 65 DG "C1'" C N R 66 DG N9 N Y N 67 DG C8 C Y N 68 DG N7 N Y N 69 DG C5 C Y N 70 DG C6 C N N 71 DG O6 O N N 72 DG N1 N N N 73 DG C2 C N N 74 DG N2 N N N 75 DG N3 N N N 76 DG C4 C Y N 77 DG HOP3 H N N 78 DG HOP2 H N N 79 DG "H5'" H N N 80 DG "H5''" H N N 81 DG "H4'" H N N 82 DG "H3'" H N N 83 DG "HO3'" H N N 84 DG "H2'" H N N 85 DG "H2''" H N N 86 DG "H1'" H N N 87 DG H8 H N N 88 DG H1 H N N 89 DG H21 H N N 90 DG H22 H N N 91 HOH O O N N 92 HOH H1 H N N 93 HOH H2 H N N 94 K K K N N 95 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 58I N1 C1 sing N N 1 58I C3 C4 sing N N 2 58I C3 C2 sing N N 3 58I C4 N2 sing N N 4 58I C1 C2 sing N N 5 58I N2 HN21 sing N N 6 58I N2 HN22 sing N N 7 58I N2 H3 sing N N 8 58I C4 H41 sing N N 9 58I C4 H42 sing N N 10 58I C3 H31 sing N N 11 58I C3 H32 sing N N 12 58I C2 H21 sing N N 13 58I C2 H22 sing N N 14 58I C1 HN11 sing N N 15 58I C1 H1 sing N N 16 58I N1 H2 sing N N 17 58I N1 HN12 sing N N 18 58I N1 H14 sing N N 19 DC OP3 P sing N N 20 DC OP3 HOP3 sing N N 21 DC P OP1 doub N N 22 DC P OP2 sing N N 23 DC P "O5'" sing N N 24 DC OP2 HOP2 sing N N 25 DC "O5'" "C5'" sing N N 26 DC "C5'" "C4'" sing N N 27 DC "C5'" "H5'" sing N N 28 DC "C5'" "H5''" sing N N 29 DC "C4'" "O4'" sing N N 30 DC "C4'" "C3'" sing N N 31 DC "C4'" "H4'" sing N N 32 DC "O4'" "C1'" sing N N 33 DC "C3'" "O3'" sing N N 34 DC "C3'" "C2'" sing N N 35 DC "C3'" "H3'" sing N N 36 DC "O3'" "HO3'" sing N N 37 DC "C2'" "C1'" sing N N 38 DC "C2'" "H2'" sing N N 39 DC "C2'" "H2''" sing N N 40 DC "C1'" N1 sing N N 41 DC "C1'" "H1'" sing N N 42 DC N1 C2 sing N N 43 DC N1 C6 sing N N 44 DC C2 O2 doub N N 45 DC C2 N3 sing N N 46 DC N3 C4 doub N N 47 DC C4 N4 sing N N 48 DC C4 C5 sing N N 49 DC N4 H41 sing N N 50 DC N4 H42 sing N N 51 DC C5 C6 doub N N 52 DC C5 H5 sing N N 53 DC C6 H6 sing N N 54 DG OP3 P sing N N 55 DG OP3 HOP3 sing N N 56 DG P OP1 doub N N 57 DG P OP2 sing N N 58 DG P "O5'" sing N N 59 DG OP2 HOP2 sing N N 60 DG "O5'" "C5'" sing N N 61 DG "C5'" "C4'" sing N N 62 DG "C5'" "H5'" sing N N 63 DG "C5'" "H5''" sing N N 64 DG "C4'" "O4'" sing N N 65 DG "C4'" "C3'" sing N N 66 DG "C4'" "H4'" sing N N 67 DG "O4'" "C1'" sing N N 68 DG "C3'" "O3'" sing N N 69 DG "C3'" "C2'" sing N N 70 DG "C3'" "H3'" sing N N 71 DG "O3'" "HO3'" sing N N 72 DG "C2'" "C1'" sing N N 73 DG "C2'" "H2'" sing N N 74 DG "C2'" "H2''" sing N N 75 DG "C1'" N9 sing N N 76 DG "C1'" "H1'" sing N N 77 DG N9 C8 sing Y N 78 DG N9 C4 sing Y N 79 DG C8 N7 doub Y N 80 DG C8 H8 sing N N 81 DG N7 C5 sing Y N 82 DG C5 C6 sing N N 83 DG C5 C4 doub Y N 84 DG C6 O6 doub N N 85 DG C6 N1 sing N N 86 DG N1 C2 sing N N 87 DG N1 H1 sing N N 88 DG C2 N2 sing N N 89 DG C2 N3 doub N N 90 DG N2 H21 sing N N 91 DG N2 H22 sing N N 92 DG N3 C4 sing N N 93 HOH O H1 sing N N 94 HOH O H2 sing N N 95 # _ndb_struct_conf_na.entry_id 7ATG _ndb_struct_conf_na.feature 'z-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 6 1_555 -0.236 -0.121 0.123 3.220 -0.883 1.202 1 A_DC1:DG12_B A 1 ? B 12 ? 19 1 1 A DG 2 1_555 B DC 5 1_555 0.270 -0.151 -0.014 -4.915 -1.407 2.189 2 A_DG2:DC11_B A 2 ? B 11 ? 19 1 1 A DC 3 1_555 B DG 4 1_555 -0.229 -0.171 0.004 2.448 -3.835 3.039 3 A_DC3:DG10_B A 3 ? B 10 ? 19 1 1 A DG 4 1_555 B DC 3 1_555 0.210 -0.134 0.096 -5.066 -1.265 2.607 4 A_DG4:DC9_B A 4 ? B 9 ? 19 1 1 A DC 5 1_555 B DG 2 1_555 -0.163 -0.143 0.004 2.665 1.279 2.538 5 A_DC5:DG8_B A 5 ? B 8 ? 19 1 1 A DG 6 1_555 B DC 1 1_555 0.287 -0.141 0.115 3.700 1.569 1.529 6 A_DG6:DC7_B A 6 ? B 7 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 6 1_555 A DG 2 1_555 B DC 5 1_555 0.129 5.354 3.639 0.723 -2.193 -6.451 -32.724 5.061 5.125 18.720 6.168 -6.851 1 AA_DC1DG2:DC11DG12_BB A 1 ? B 12 ? A 2 ? B 11 ? 1 A DG 2 1_555 B DC 5 1_555 A DC 3 1_555 B DG 4 1_555 -0.022 -1.213 3.265 0.021 -6.467 -51.029 1.830 -0.024 3.100 7.472 0.025 -51.410 2 AA_DG2DC3:DG10DC11_BB A 2 ? B 11 ? A 3 ? B 10 ? 1 A DC 3 1_555 B DG 4 1_555 A DG 4 1_555 B DC 3 1_555 -0.074 5.407 3.659 -0.169 -2.866 -5.270 -28.702 -2.062 5.792 28.549 -1.682 -6.001 3 AA_DC3DG4:DC9DG10_BB A 3 ? B 10 ? A 4 ? B 9 ? 1 A DG 4 1_555 B DC 3 1_555 A DC 5 1_555 B DG 2 1_555 -0.204 -0.839 3.269 0.480 -2.884 -54.783 1.082 -0.193 3.226 3.132 0.521 -54.855 4 AA_DG4DC5:DG8DC9_BB A 4 ? B 9 ? A 5 ? B 8 ? 1 A DC 5 1_555 B DG 2 1_555 A DG 6 1_555 B DC 1 1_555 0.050 5.148 3.428 1.161 -2.170 -8.131 -27.703 4.112 4.587 14.860 7.955 -8.495 5 AA_DC5DG6:DC7DG8_BB A 5 ? B 8 ? A 6 ? B 7 ? # _pdbx_audit_support.funding_organization 'Polish National Science Centre' _pdbx_audit_support.country Poland _pdbx_audit_support.grant_number 2013/10/M/NZ1/00251 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 K ? ? K ? ? 'SUBJECT OF INVESTIGATION' ? 2 58I ? ? 58I ? ? 'SUBJECT OF INVESTIGATION' ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4HIG _pdbx_initial_refinement_model.details ? # _pdbx_related_exp_data_set.ordinal 1 _pdbx_related_exp_data_set.data_reference 10.18430/m37atg _pdbx_related_exp_data_set.metadata_reference ? _pdbx_related_exp_data_set.data_set_type 'diffraction image data' _pdbx_related_exp_data_set.details ? # _atom_sites.entry_id 7ATG _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.055648 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.032237 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022800 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C K N O P # loop_