HEADER SIGNALING PROTEIN 30-OCT-20 7ATS TITLE THE LIMK1 KINASE DOMAIN BOUND TO LIJTF500127 COMPND MOL_ID: 1; COMPND 2 MOLECULE: LIM DOMAIN KINASE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: LIMK-1; COMPND 5 EC: 2.7.11.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: LIMK1, LIMK; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS KINASE INHIBITOR ACTIVE SITE CFL1 ACTIN CYTOSKELETON, SIGNALING KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.MATHEA,D.CHATTERJEE,F.PREUSS,S.YAMAMOTO,M.TAWADA,I.NOMURA,T.TAKAGI, AUTHOR 2 M.AHMED,W.LITTLE,S.MUELLER-KNAPP,S.KNAPP REVDAT 2 31-JAN-24 7ATS 1 REMARK REVDAT 1 25-NOV-20 7ATS 0 JRNL AUTH S.MATHEA,D.CHATTERJEE,F.PREUSS,S.YAMAMOTO,M.TAWADA,I.NOMURA, JRNL AUTH 2 T.TAKAGI,M.AHMED,W.LITTLE,S.MUELLER-KNAPP,S.KNAPP JRNL TITL THE LIMK1 KINASE DOMAIN BOUND TO LIJTF500127 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.71 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.570 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 8903 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.251 REMARK 3 R VALUE (WORKING SET) : 0.248 REMARK 3 FREE R VALUE : 0.312 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 449 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.7100 - 4.0400 1.00 2963 153 0.2351 0.3020 REMARK 3 2 4.0400 - 3.2100 1.00 2774 144 0.2726 0.3258 REMARK 3 3 3.2100 - 2.8000 1.00 2717 152 0.2733 0.3468 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.273 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 38.678 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 94.95 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 87.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 1975 REMARK 3 ANGLE : 1.343 2718 REMARK 3 CHIRALITY : 0.070 309 REMARK 3 PLANARITY : 0.009 390 REMARK 3 DIHEDRAL : 7.470 319 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -12.2842 32.1450 -7.8899 REMARK 3 T TENSOR REMARK 3 T11: 0.6356 T22: 0.6940 REMARK 3 T33: 0.5800 T12: -0.0281 REMARK 3 T13: -0.0271 T23: -0.0173 REMARK 3 L TENSOR REMARK 3 L11: 1.6373 L22: 1.1701 REMARK 3 L33: 0.5883 L12: 0.8802 REMARK 3 L13: -0.3052 L23: 0.4511 REMARK 3 S TENSOR REMARK 3 S11: 0.0568 S12: 0.1717 S13: -0.2055 REMARK 3 S21: -0.0629 S22: 0.0425 S23: 0.0043 REMARK 3 S31: 0.0523 S32: 0.1188 S33: 0.0002 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7ATS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 31-OCT-20. REMARK 100 THE DEPOSITION ID IS D_1292112081. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-MAR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9999 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8956 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 44.710 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.53900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5NXC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG3350 0.1 M BIS-TRIS-PROPANE PH REMARK 280 7.5 0.2 M POTASSIUM THIOCYANATE 10% ETHYLENE GLYCOL, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 57.98433 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 115.96867 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 86.97650 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 144.96083 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 28.99217 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 57.98433 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 115.96867 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 144.96083 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 86.97650 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 28.99217 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 481 REMARK 465 ALA A 482 REMARK 465 ARG A 483 REMARK 465 LEU A 484 REMARK 465 MET A 485 REMARK 465 VAL A 486 REMARK 465 ASP A 487 REMARK 465 GLU A 488 REMARK 465 LYS A 489 REMARK 465 THR A 490 REMARK 465 GLN A 491 REMARK 465 PRO A 492 REMARK 465 GLU A 493 REMARK 465 GLY A 494 REMARK 465 LEU A 495 REMARK 465 ARG A 496 REMARK 465 SER A 497 REMARK 465 LEU A 498 REMARK 465 LYS A 499 REMARK 465 LYS A 500 REMARK 465 PRO A 501 REMARK 465 ASP A 502 REMARK 465 ARG A 503 REMARK 465 LYS A 504 REMARK 465 LYS A 505 REMARK 465 ARG A 506 REMARK 465 TYR A 507 REMARK 465 THR A 508 REMARK 465 VAL A 509 REMARK 465 VAL A 510 REMARK 465 GLY A 511 REMARK 465 ASN A 512 REMARK 465 GLY A 635 REMARK 465 GLU A 636 REMARK 465 SER A 637 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 328 OG REMARK 470 ARG A 332 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 333 CG1 CG2 CD1 REMARK 470 ARG A 335 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 338 CG OD1 OD2 REMARK 470 VAL A 344 CG1 CG2 REMARK 470 LYS A 347 CG CD CE NZ REMARK 470 CYS A 349 SG REMARK 470 PHE A 350 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN A 352 CG CD OE1 NE2 REMARK 470 ILE A 354 CG1 CG2 CD1 REMARK 470 LYS A 355 CG CD CE NZ REMARK 470 ARG A 359 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 360 CG CD OE1 OE2 REMARK 470 THR A 361 OG1 CG2 REMARK 470 GLU A 363 CG CD OE1 OE2 REMARK 470 LYS A 368 CG CD CE NZ REMARK 470 GLU A 369 CG CD OE1 OE2 REMARK 470 LEU A 370 CG CD1 CD2 REMARK 470 ILE A 371 CG1 CG2 CD1 REMARK 470 ARG A 372 CG CD NE CZ NH1 NH2 REMARK 470 PHE A 373 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP A 374 CG OD1 OD2 REMARK 470 GLU A 375 CG CD OE1 OE2 REMARK 470 GLU A 376 CG CD OE1 OE2 REMARK 470 THR A 377 OG1 CG2 REMARK 470 GLN A 378 CG CD OE1 NE2 REMARK 470 ARG A 379 CG CD NE CZ NH1 NH2 REMARK 470 THR A 380 OG1 CG2 REMARK 470 LEU A 382 CG CD1 CD2 REMARK 470 LYS A 383 CG CD CE NZ REMARK 470 GLU A 384 CG CD OE1 OE2 REMARK 470 VAL A 385 CG1 CG2 REMARK 470 LYS A 386 CG CD CE NZ REMARK 470 VAL A 387 CG1 CG2 REMARK 470 ARG A 389 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 392 CG CD OE1 OE2 REMARK 470 LYS A 398 CG CD CE NZ REMARK 470 LEU A 403 CG CD1 CD2 REMARK 470 TYR A 404 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 405 CG CD CE NZ REMARK 470 ASP A 406 CG OD1 OD2 REMARK 470 LYS A 407 CG CD CE NZ REMARK 470 ARG A 408 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 409 CG CD1 CD2 REMARK 470 GLU A 414 CG CD OE1 OE2 REMARK 470 LYS A 417 CG CD CE NZ REMARK 470 ARG A 422 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 426 CG CD CE NZ REMARK 470 SER A 430 OG REMARK 470 GLN A 431 CG CD OE1 NE2 REMARK 470 ASN A 455 CG OD1 ND2 REMARK 470 ARG A 459 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 470 CG CD OE1 OE2 REMARK 470 LYS A 472 CG CD CE NZ REMARK 470 TYR A 514 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 MET A 516 CG SD CE REMARK 470 GLU A 519 CG CD OE1 OE2 REMARK 470 ILE A 521 CG1 CG2 CD1 REMARK 470 ARG A 524 CG CD NE CZ NH1 NH2 REMARK 470 SER A 525 OG REMARK 470 GLU A 528 CG CD OE1 OE2 REMARK 470 ASN A 547 CG OD1 ND2 REMARK 470 ASP A 549 CG OD1 OD2 REMARK 470 ASP A 551 CG OD1 OD2 REMARK 470 LEU A 553 CG CD1 CD2 REMARK 470 ARG A 555 CG CD NE CZ NH1 NH2 REMARK 470 MET A 557 CG SD CE REMARK 470 ASP A 558 CG OD1 OD2 REMARK 470 PHE A 559 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU A 561 CG CD1 CD2 REMARK 470 ARG A 564 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 568 CG OD1 OD2 REMARK 470 ARG A 569 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 585 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 589 CG CD1 CD2 REMARK 470 ASP A 590 CG OD1 OD2 REMARK 470 GLU A 592 CG CD OE1 OE2 REMARK 470 LYS A 593 CG CD CE NZ REMARK 470 LYS A 599 CG CD CE NZ REMARK 470 HIS A 614 CG ND1 CD2 CE1 NE2 REMARK 470 LEU A 615 CG CD1 CD2 REMARK 470 GLN A 620 CG CD OE1 NE2 REMARK 470 LEU A 621 CG CD1 CD2 REMARK 470 GLU A 622 CG CD OE1 OE2 REMARK 470 GLN A 623 CG CD OE1 NE2 REMARK 470 LEU A 624 CG CD1 CD2 REMARK 470 ARG A 626 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 630 CG CD OE1 OE2 REMARK 470 ARG A 633 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 634 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 608 NE - CZ - NH1 ANGL. DEV. = 6.8 DEGREES REMARK 500 ARG A 608 NE - CZ - NH2 ANGL. DEV. = -4.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 359 21.12 -73.62 REMARK 500 GLU A 360 -42.18 -150.38 REMARK 500 ARG A 372 -166.83 -75.60 REMARK 500 PHE A 373 12.64 -175.54 REMARK 500 ARG A 389 -39.68 -33.59 REMARK 500 ASP A 406 -106.26 60.96 REMARK 500 ASN A 410 131.87 -172.36 REMARK 500 SER A 427 59.99 -110.91 REMARK 500 ARG A 459 -24.38 68.99 REMARK 500 ASP A 478 46.61 77.89 REMARK 500 TYR A 514 2.16 -59.94 REMARK 500 ARG A 545 76.63 48.84 REMARK 500 TYR A 552 -75.71 -123.78 REMARK 500 LEU A 553 106.48 -59.60 REMARK 500 ASP A 558 47.89 -86.12 REMARK 500 TYR A 570 -33.73 -137.75 REMARK 500 SER A 578 -31.69 63.58 REMARK 500 ALA A 612 -67.51 -121.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP A 478 PHE A 479 147.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue RXQ A 701 DBREF 7ATS A 330 637 UNP P53667 LIMK1_HUMAN 330 637 SEQADV 7ATS SER A 328 UNP P53667 EXPRESSION TAG SEQADV 7ATS MET A 329 UNP P53667 EXPRESSION TAG SEQRES 1 A 310 SER MET PRO HIS ARG ILE PHE ARG PRO SER ASP LEU ILE SEQRES 2 A 310 HIS GLY GLU VAL LEU GLY LYS GLY CYS PHE GLY GLN ALA SEQRES 3 A 310 ILE LYS VAL THR HIS ARG GLU THR GLY GLU VAL MET VAL SEQRES 4 A 310 MET LYS GLU LEU ILE ARG PHE ASP GLU GLU THR GLN ARG SEQRES 5 A 310 THR PHE LEU LYS GLU VAL LYS VAL MET ARG CYS LEU GLU SEQRES 6 A 310 HIS PRO ASN VAL LEU LYS PHE ILE GLY VAL LEU TYR LYS SEQRES 7 A 310 ASP LYS ARG LEU ASN PHE ILE THR GLU TYR ILE LYS GLY SEQRES 8 A 310 GLY THR LEU ARG GLY ILE ILE LYS SER MET ASP SER GLN SEQRES 9 A 310 TYR PRO TRP SER GLN ARG VAL SER PHE ALA LYS ASP ILE SEQRES 10 A 310 ALA SER GLY MET ALA TYR LEU HIS SER MET ASN ILE ILE SEQRES 11 A 310 HIS ARG ASP LEU ASN SER HIS ASN CYS LEU VAL ARG GLU SEQRES 12 A 310 ASN LYS ASN VAL VAL VAL ALA ASP PHE GLY LEU ALA ARG SEQRES 13 A 310 LEU MET VAL ASP GLU LYS THR GLN PRO GLU GLY LEU ARG SEQRES 14 A 310 SER LEU LYS LYS PRO ASP ARG LYS LYS ARG TYR THR VAL SEQRES 15 A 310 VAL GLY ASN PRO TYR TRP MET ALA PRO GLU MET ILE ASN SEQRES 16 A 310 GLY ARG SER TYR ASP GLU LYS VAL ASP VAL PHE SER PHE SEQRES 17 A 310 GLY ILE VAL LEU CYS GLU ILE ILE GLY ARG VAL ASN ALA SEQRES 18 A 310 ASP PRO ASP TYR LEU PRO ARG THR MET ASP PHE GLY LEU SEQRES 19 A 310 ASN VAL ARG GLY PHE LEU ASP ARG TYR CYS PRO PRO ASN SEQRES 20 A 310 CYS PRO PRO SER PHE PHE PRO ILE THR VAL ARG CYS CYS SEQRES 21 A 310 ASP LEU ASP PRO GLU LYS ARG PRO SER PHE VAL LYS LEU SEQRES 22 A 310 GLU HIS TRP LEU GLU THR LEU ARG MET HIS LEU ALA GLY SEQRES 23 A 310 HIS LEU PRO LEU GLY PRO GLN LEU GLU GLN LEU ASP ARG SEQRES 24 A 310 GLY PHE TRP GLU THR TYR ARG ARG GLY GLU SER HET RXQ A 701 36 HETNAM RXQ N-[3-[5-(4-CHLOROPHENYL)-1H-PYRROLO[2,3-B]PYRIDINE-3- HETNAM 2 RXQ CARBONYL]-2,4-DIFLUOROPHENYL]BENZENESULFONAMIDE HETSYN RXQ N-[3-[[5-(4-CHLOROPHENYL)-1H-PYRROLO[2,3-B]PYRIDIN-3- HETSYN 2 RXQ YL]CARBONYL]-2,4-BIS(FLUORANYL) HETSYN 3 RXQ PHENYL]BENZENESULFONAMIDE; LIJTF500127 FORMUL 2 RXQ C26 H16 CL F2 N3 O3 S HELIX 1 AA1 ARG A 335 SER A 337 5 3 HELIX 2 AA2 ASP A 374 ARG A 389 1 16 HELIX 3 AA3 THR A 420 SER A 427 1 8 HELIX 4 AA4 PRO A 433 MET A 454 1 22 HELIX 5 AA5 ALA A 517 GLY A 523 1 7 HELIX 6 AA6 GLU A 528 ARG A 545 1 18 HELIX 7 AA7 ASN A 562 CYS A 571 1 10 HELIX 8 AA8 SER A 578 CYS A 587 1 10 HELIX 9 AA9 SER A 596 ALA A 612 1 17 HELIX 10 AB1 LEU A 617 ARG A 634 1 18 SHEET 1 AA1 6 ARG A 332 ILE A 333 0 SHEET 2 AA1 6 PHE A 399 LYS A 405 1 O VAL A 402 N ARG A 332 SHEET 3 AA1 6 ARG A 408 GLU A 414 -1 O ILE A 412 N GLY A 401 SHEET 4 AA1 6 VAL A 364 LEU A 370 -1 N VAL A 366 O THR A 413 SHEET 5 AA1 6 GLY A 351 HIS A 358 -1 N VAL A 356 O MET A 365 SHEET 6 AA1 6 LEU A 339 LYS A 347 -1 N LEU A 345 O ALA A 353 SHEET 1 AA2 2 LEU A 467 VAL A 468 0 SHEET 2 AA2 2 VAL A 474 VAL A 475 -1 O VAL A 475 N LEU A 467 SITE 1 AC1 15 LEU A 345 VAL A 366 LYS A 368 MET A 388 SITE 2 AC1 15 LEU A 397 PHE A 411 THR A 413 GLU A 414 SITE 3 AC1 15 TYR A 415 ILE A 416 GLY A 419 LEU A 467 SITE 4 AC1 15 ALA A 477 ASP A 478 PHE A 479 CRYST1 81.096 81.096 173.953 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012331 0.007119 0.000000 0.00000 SCALE2 0.000000 0.014239 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005749 0.00000