HEADER FLUORESCENT PROTEIN 04-NOV-20 7AV6 TITLE FAST IN A DOMAIN-SWAPPED DIMER FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOTOACTIVE YELLOW PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PYP; FAST; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: FAST SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HALORHODOSPIRA HALOPHILA; SOURCE 3 ORGANISM_TAXID: 1053; SOURCE 4 GENE: PYP; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET-24B KEYWDS FLUORESCENCE, FLUOROGEN, FLUOROGEN-ACTIVATING PROTEIN, FLUORESCENT KEYWDS 2 LABELLING, FAST, FLUORESCENT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.BUKHDRUKER,A.REMEEVA,D.RUCHKIN,D.GORBACHEV,N.POVAROVA,K.MINEEV, AUTHOR 2 S.GONCHARUK,M.BARANOV,A.MISHIN,V.BORSHCHEVSKIY REVDAT 2 31-JAN-24 7AV6 1 REMARK REVDAT 1 09-JUN-21 7AV6 0 JRNL AUTH K.S.MINEEV,S.A.GONCHARUK,M.V.GONCHARUK,N.V.POVAROVA, JRNL AUTH 2 A.I.SOKOLOV,N.S.BALEEVA,A.Y.SMIRNOV,I.N.MYASNYANKO, JRNL AUTH 3 D.A.RUCHKIN,S.BUKHDRUKER,A.REMEEVA,A.MISHIN,V.BORSHCHEVSKIY, JRNL AUTH 4 V.GORDELIY,A.S.ARSENIEV,D.A.GORBACHEV,A.S.GAVRIKOV, JRNL AUTH 5 A.S.MISHIN,M.S.BARANOV JRNL TITL NANOFAST: STRUCTURE-BASED DESIGN OF A SMALL JRNL TITL 2 FLUOROGEN-ACTIVATING PROTEIN WITH ONLY 98 AMINO ACIDS. JRNL REF CHEM SCI V. 12 6719 2021 JRNL REFN ISSN 2041-6520 JRNL PMID 34040747 JRNL DOI 10.1039/D1SC01454D REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18_3855 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.08 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 18518 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 927 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.0800 - 2.8700 1.00 2731 144 0.1960 0.2166 REMARK 3 2 2.8700 - 2.2800 0.99 2574 135 0.2455 0.2768 REMARK 3 3 2.2800 - 1.9900 0.99 2502 132 0.2273 0.2432 REMARK 3 4 1.9900 - 1.8100 0.99 2482 130 0.2313 0.2614 REMARK 3 5 1.8100 - 1.6800 0.98 2473 131 0.2520 0.2824 REMARK 3 6 1.6800 - 1.5800 0.98 2410 127 0.2806 0.3216 REMARK 3 7 1.5800 - 1.5000 0.97 2419 128 0.3451 0.3721 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.202 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.448 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.93 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 789 REMARK 3 ANGLE : 0.736 1068 REMARK 3 CHIRALITY : 0.072 112 REMARK 3 PLANARITY : 0.006 141 REMARK 3 DIHEDRAL : 17.863 275 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 25 THROUGH 29 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.7336 30.5233 12.9871 REMARK 3 T TENSOR REMARK 3 T11: 0.5846 T22: 0.5430 REMARK 3 T33: 0.6606 T12: 0.0444 REMARK 3 T13: -0.0470 T23: -0.0238 REMARK 3 L TENSOR REMARK 3 L11: 0.0973 L22: 0.1277 REMARK 3 L33: 0.1147 L12: 0.1139 REMARK 3 L13: -0.0026 L23: -0.0311 REMARK 3 S TENSOR REMARK 3 S11: -0.2923 S12: -0.9394 S13: 0.1727 REMARK 3 S21: -0.1621 S22: 0.4161 S23: 0.0170 REMARK 3 S31: 0.4432 S32: -0.0544 S33: 0.0036 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 30 THROUGH 44 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.3564 34.6136 17.6372 REMARK 3 T TENSOR REMARK 3 T11: 0.3876 T22: 0.2724 REMARK 3 T33: 0.3484 T12: -0.0062 REMARK 3 T13: 0.0277 T23: -0.0058 REMARK 3 L TENSOR REMARK 3 L11: 0.0634 L22: 0.3158 REMARK 3 L33: 0.7749 L12: 0.1194 REMARK 3 L13: -0.0193 L23: -0.4251 REMARK 3 S TENSOR REMARK 3 S11: 0.0485 S12: -0.0613 S13: 0.0660 REMARK 3 S21: -0.2299 S22: 0.0939 S23: 0.0074 REMARK 3 S31: -0.1406 S32: 0.1152 S33: 0.0006 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 48 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.9122 38.7855 24.6698 REMARK 3 T TENSOR REMARK 3 T11: 0.3394 T22: 0.4367 REMARK 3 T33: 0.4170 T12: 0.0564 REMARK 3 T13: 0.0646 T23: 0.0720 REMARK 3 L TENSOR REMARK 3 L11: 0.0854 L22: 0.5437 REMARK 3 L33: 0.1507 L12: -0.1792 REMARK 3 L13: 0.1540 L23: -0.1622 REMARK 3 S TENSOR REMARK 3 S11: 0.3817 S12: 0.0274 S13: -0.9889 REMARK 3 S21: -0.3133 S22: -0.0478 S23: -0.0852 REMARK 3 S31: -0.2519 S32: -0.2394 S33: 0.0077 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 57 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.0250 30.3980 39.6391 REMARK 3 T TENSOR REMARK 3 T11: 0.2739 T22: 0.5377 REMARK 3 T33: 0.3571 T12: 0.0142 REMARK 3 T13: -0.0246 T23: 0.0421 REMARK 3 L TENSOR REMARK 3 L11: 1.5905 L22: 0.9742 REMARK 3 L33: 0.1622 L12: 0.5428 REMARK 3 L13: -0.5253 L23: -0.1253 REMARK 3 S TENSOR REMARK 3 S11: 0.2301 S12: -0.3967 S13: -0.2644 REMARK 3 S21: 0.1155 S22: -0.0523 S23: -0.2157 REMARK 3 S31: 0.0726 S32: 0.7719 S33: 0.0011 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 76 THROUGH 85 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.9124 22.6519 46.5417 REMARK 3 T TENSOR REMARK 3 T11: 0.5033 T22: 0.6265 REMARK 3 T33: 0.5516 T12: -0.0292 REMARK 3 T13: -0.0534 T23: 0.2442 REMARK 3 L TENSOR REMARK 3 L11: 0.7862 L22: 0.1928 REMARK 3 L33: 0.1096 L12: -0.3021 REMARK 3 L13: 0.0189 L23: 0.0776 REMARK 3 S TENSOR REMARK 3 S11: 0.0559 S12: -0.9923 S13: -1.3203 REMARK 3 S21: 1.3338 S22: 0.2086 S23: -0.5672 REMARK 3 S31: 0.6047 S32: -0.1658 S33: -0.0472 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 86 THROUGH 96 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.9770 32.0986 50.6031 REMARK 3 T TENSOR REMARK 3 T11: 0.5334 T22: 0.8287 REMARK 3 T33: 0.3410 T12: -0.1825 REMARK 3 T13: 0.0684 T23: 0.1213 REMARK 3 L TENSOR REMARK 3 L11: 1.5738 L22: 1.5360 REMARK 3 L33: 0.2620 L12: -1.3503 REMARK 3 L13: 0.1837 L23: 0.0625 REMARK 3 S TENSOR REMARK 3 S11: -0.5429 S12: -1.1996 S13: 0.2119 REMARK 3 S21: 0.7649 S22: 0.7007 S23: -0.2067 REMARK 3 S31: 0.1344 S32: -1.0943 S33: 0.0688 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 97 THROUGH 102 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.1518 45.4601 48.5129 REMARK 3 T TENSOR REMARK 3 T11: 0.6815 T22: 0.7105 REMARK 3 T33: 0.6095 T12: -0.0272 REMARK 3 T13: -0.0286 T23: 0.1050 REMARK 3 L TENSOR REMARK 3 L11: 0.2549 L22: 0.0292 REMARK 3 L33: 0.0531 L12: 0.0269 REMARK 3 L13: -0.0533 L23: 0.0321 REMARK 3 S TENSOR REMARK 3 S11: -1.0715 S12: 0.2716 S13: -1.1281 REMARK 3 S21: -0.1071 S22: -0.0214 S23: -0.1543 REMARK 3 S31: -0.9799 S32: 0.7411 S33: -0.0029 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 103 THROUGH 111 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.4130 35.0329 48.2524 REMARK 3 T TENSOR REMARK 3 T11: 0.3720 T22: 0.6706 REMARK 3 T33: 0.4373 T12: -0.0133 REMARK 3 T13: -0.0064 T23: 0.0292 REMARK 3 L TENSOR REMARK 3 L11: 0.4723 L22: 0.4879 REMARK 3 L33: 0.4213 L12: -0.5252 REMARK 3 L13: 0.3238 L23: -0.2885 REMARK 3 S TENSOR REMARK 3 S11: -0.0962 S12: -0.3447 S13: 0.3533 REMARK 3 S21: 0.1215 S22: -0.1423 S23: 0.2707 REMARK 3 S31: 0.4026 S32: -0.3953 S33: 0.0009 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 112 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.5123 32.5736 42.8320 REMARK 3 T TENSOR REMARK 3 T11: 0.3082 T22: 0.4992 REMARK 3 T33: 0.4492 T12: -0.0034 REMARK 3 T13: -0.0022 T23: 0.0038 REMARK 3 L TENSOR REMARK 3 L11: 0.8607 L22: 0.4276 REMARK 3 L33: 1.0042 L12: -0.5303 REMARK 3 L13: 0.2029 L23: -0.4905 REMARK 3 S TENSOR REMARK 3 S11: -0.0061 S12: -0.9895 S13: -0.3813 REMARK 3 S21: 0.0248 S22: 0.1190 S23: 0.6159 REMARK 3 S31: -0.0999 S32: -0.7935 S33: 0.0130 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7AV6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-NOV-20. REMARK 100 THE DEPOSITION ID IS D_1292112082. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-SEP-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9772 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 20200131 REMARK 200 DATA SCALING SOFTWARE : XSCALE 20200131 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18549 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 42.090 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 25.40 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 32.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.6 REMARK 200 DATA REDUNDANCY IN SHELL : 23.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 0.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MORDA 1.3.02 REMARK 200 STARTING MODEL: 1ODV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 31.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MAGNESIUM FORMATE, 20 % W/V PEG REMARK 280 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.52000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 22.96000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 22.96000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 26.26000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 22.96000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 22.96000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 78.78000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 22.96000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 22.96000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 26.26000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 22.96000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 22.96000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 78.78000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 52.52000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 45.92000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 45.92000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 52.52000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 HIS A 3 REMARK 465 VAL A 4 REMARK 465 ALA A 5 REMARK 465 PHE A 6 REMARK 465 GLY A 7 REMARK 465 SER A 8 REMARK 465 GLU A 9 REMARK 465 ASP A 10 REMARK 465 ILE A 11 REMARK 465 GLU A 12 REMARK 465 ASN A 13 REMARK 465 THR A 14 REMARK 465 LEU A 15 REMARK 465 ALA A 16 REMARK 465 LYS A 17 REMARK 465 MET A 18 REMARK 465 ASP A 19 REMARK 465 ASP A 20 REMARK 465 GLY A 21 REMARK 465 GLN A 22 REMARK 465 LEU A 23 REMARK 465 ASP A 24 REMARK 465 ALA A 45 REMARK 465 GLU A 46 REMARK 465 GLY A 47 REMARK 465 LEU A 127 REMARK 465 ALA A 128 REMARK 465 ALA A 129 REMARK 465 ALA A 130 REMARK 465 LEU A 131 REMARK 465 GLU A 132 REMARK 465 HIS A 133 REMARK 465 HIS A 134 REMARK 465 HIS A 135 REMARK 465 HIS A 136 REMARK 465 HIS A 137 REMARK 465 HIS A 138 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 26 CD1 CD2 REMARK 470 ASP A 48 CG OD1 OD2 REMARK 470 LYS A 55 NZ REMARK 470 LYS A 64 CE NZ REMARK 470 LYS A 80 NZ REMARK 470 ARG A 100 CD NE CZ NH1 NH2 REMARK 470 LYS A 104 CE NZ REMARK 470 LYS A 106 CD CE NZ REMARK 470 LYS A 110 CD CE NZ REMARK 470 LYS A 111 NZ REMARK 470 LYS A 123 CG CD CE NZ REMARK 470 ARG A 124 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 126 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 53 71.23 -151.26 REMARK 500 ASP A 53 71.23 -153.62 REMARK 500 PHE A 75 -75.61 -139.68 REMARK 500 ASN A 89 85.90 -163.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 202 DBREF 7AV6 A 1 125 UNP P16113 PYP_HALHA 1 125 SEQADV 7AV6 GLY A 69 UNP P16113 CYS 69 ENGINEERED MUTATION SEQADV 7AV6 TRP A 94 UNP P16113 TYR 94 ENGINEERED MUTATION SEQADV 7AV6 MET A 95 UNP P16113 THR 95 ENGINEERED MUTATION SEQADV 7AV6 ILE A 96 UNP P16113 PHE 96 ENGINEERED MUTATION SEQADV 7AV6 PRO A 97 UNP P16113 ASP 97 ENGINEERED MUTATION SEQADV 7AV6 THR A 98 UNP P16113 TYR 98 ENGINEERED MUTATION SEQADV 7AV6 SER A 99 UNP P16113 GLN 99 ENGINEERED MUTATION SEQADV 7AV6 ARG A 100 UNP P16113 MET 100 ENGINEERED MUTATION SEQADV 7AV6 GLY A 101 UNP P16113 THR 101 ENGINEERED MUTATION SEQADV 7AV6 LYS A 126 UNP P16113 EXPRESSION TAG SEQADV 7AV6 LEU A 127 UNP P16113 EXPRESSION TAG SEQADV 7AV6 ALA A 128 UNP P16113 EXPRESSION TAG SEQADV 7AV6 ALA A 129 UNP P16113 EXPRESSION TAG SEQADV 7AV6 ALA A 130 UNP P16113 EXPRESSION TAG SEQADV 7AV6 LEU A 131 UNP P16113 EXPRESSION TAG SEQADV 7AV6 GLU A 132 UNP P16113 EXPRESSION TAG SEQADV 7AV6 HIS A 133 UNP P16113 EXPRESSION TAG SEQADV 7AV6 HIS A 134 UNP P16113 EXPRESSION TAG SEQADV 7AV6 HIS A 135 UNP P16113 EXPRESSION TAG SEQADV 7AV6 HIS A 136 UNP P16113 EXPRESSION TAG SEQADV 7AV6 HIS A 137 UNP P16113 EXPRESSION TAG SEQADV 7AV6 HIS A 138 UNP P16113 EXPRESSION TAG SEQRES 1 A 138 MET GLU HIS VAL ALA PHE GLY SER GLU ASP ILE GLU ASN SEQRES 2 A 138 THR LEU ALA LYS MET ASP ASP GLY GLN LEU ASP GLY LEU SEQRES 3 A 138 ALA PHE GLY ALA ILE GLN LEU ASP GLY ASP GLY ASN ILE SEQRES 4 A 138 LEU GLN TYR ASN ALA ALA GLU GLY ASP ILE THR GLY ARG SEQRES 5 A 138 ASP PRO LYS GLN VAL ILE GLY LYS ASN PHE PHE LYS ASP SEQRES 6 A 138 VAL ALA PRO GLY THR ASP SER PRO GLU PHE TYR GLY LYS SEQRES 7 A 138 PHE LYS GLU GLY VAL ALA SER GLY ASN LEU ASN THR MET SEQRES 8 A 138 PHE GLU TRP MET ILE PRO THR SER ARG GLY PRO THR LYS SEQRES 9 A 138 VAL LYS VAL HIS MET LYS LYS ALA LEU SER GLY ASP SER SEQRES 10 A 138 TYR TRP VAL PHE VAL LYS ARG VAL LYS LEU ALA ALA ALA SEQRES 11 A 138 LEU GLU HIS HIS HIS HIS HIS HIS HET FMT A 201 3 HET FMT A 202 3 HETNAM FMT FORMIC ACID FORMUL 2 FMT 2(C H2 O2) FORMUL 4 HOH *21(H2 O) HELIX 1 AA1 ALA A 67 ASP A 71 5 5 HELIX 2 AA2 PHE A 75 GLY A 86 1 12 SHEET 1 AA1 3 ALA A 30 LEU A 33 0 SHEET 2 AA1 3 ILE A 39 ASN A 43 -1 O LEU A 40 N GLN A 32 SHEET 3 AA1 3 THR A 50 GLY A 51 -1 O GLY A 51 N TYR A 42 SHEET 1 AA2 3 ASN A 89 ILE A 96 0 SHEET 2 AA2 3 THR A 103 LYS A 111 -1 O VAL A 107 N PHE A 92 SHEET 3 AA2 3 TYR A 118 ARG A 124 -1 O LYS A 123 N LYS A 106 SITE 1 AC1 2 HIS A 108 PHE A 121 SITE 1 AC2 5 ALA A 67 PRO A 68 GLY A 69 TRP A 119 SITE 2 AC2 5 HOH A 307 CRYST1 45.920 45.920 105.040 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021777 0.000000 0.000000 0.00000 SCALE2 0.000000 0.021777 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009520 0.00000