HEADER TRANSCRIPTION 06-NOV-20 7AW7 TITLE CCAAT-BINDING COMPLEX AND HAPX BOUND TO ASPERGILLUS NIDULANS CCCA DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: HAPB; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: TRANSCRIPTION FACTOR HAPC (EUROFUNG); COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: CBFD_NFYB_HMF DOMAIN-CONTAINING PROTEIN; COMPND 11 CHAIN: C; COMPND 12 SYNONYM: HAPE; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 4; COMPND 15 MOLECULE: BZIP DOMAIN-CONTAINING PROTEIN; COMPND 16 CHAIN: D, E; COMPND 17 ENGINEERED: YES; COMPND 18 MUTATION: YES; COMPND 19 MOL_ID: 5; COMPND 20 MOLECULE: DNA; COMPND 21 CHAIN: F; COMPND 22 ENGINEERED: YES; COMPND 23 MOL_ID: 6; COMPND 24 MOLECULE: DNA; COMPND 25 CHAIN: G; COMPND 26 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS NIDULANS FGSC A4; SOURCE 3 ORGANISM_TAXID: 227321; SOURCE 4 GENE: ANIA_07545; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: ASPERGILLUS NIDULANS FGSC A4; SOURCE 9 ORGANISM_TAXID: 227321; SOURCE 10 GENE: ANIA_04034; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 12 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 13 MOL_ID: 3; SOURCE 14 ORGANISM_SCIENTIFIC: ASPERGILLUS NIDULANS FGSC A4; SOURCE 15 ORGANISM_TAXID: 227321; SOURCE 16 GENE: AN6492.2; SOURCE 17 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 18 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 19 MOL_ID: 4; SOURCE 20 ORGANISM_SCIENTIFIC: EMERICELLA NIDULANS (STRAIN FGSC A4 / ATCC SOURCE 21 38163 / CBS 112.46 / NRRL 194 / M139); SOURCE 22 ORGANISM_TAXID: 227321; SOURCE 23 STRAIN: FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139; SOURCE 24 GENE: ANIA_08251; SOURCE 25 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 26 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 27 MOL_ID: 5; SOURCE 28 SYNTHETIC: YES; SOURCE 29 ORGANISM_SCIENTIFIC: ASPERGILLUS NIDULANS FGSC A4; SOURCE 30 ORGANISM_TAXID: 227321; SOURCE 31 MOL_ID: 6; SOURCE 32 SYNTHETIC: YES; SOURCE 33 ORGANISM_SCIENTIFIC: ASPERGILLUS NIDULANS FGSC A4; SOURCE 34 ORGANISM_TAXID: 227321 KEYWDS TRANSCRIPTION FACTOR, HISTONE FOLD, BASIC LEUCINE ZIPPER, KEYWDS 2 HETEROPENTAMER, PROTEIN-DNA COMPLEX, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR E.M.HUBER,M.GROLL REVDAT 4 31-JAN-24 7AW7 1 REMARK REVDAT 3 20-JUL-22 7AW7 1 JRNL REVDAT 2 11-MAY-22 7AW7 1 JRNL REVDAT 1 13-APR-22 7AW7 0 JRNL AUTH E.M.HUBER,P.HORTSCHANSKY,M.T.SCHEVEN,M.MISSLINGER,H.HAAS, JRNL AUTH 2 A.A.BRAKHAGE,M.GROLL JRNL TITL STRUCTURAL INSIGHTS INTO COOPERATIVE DNA RECOGNITION BY THE JRNL TITL 2 CCAAT-BINDING COMPLEX AND ITS BZIP TRANSCRIPTION FACTOR JRNL TITL 3 HAPX. JRNL REF STRUCTURE V. 30 934 2022 JRNL REFN ISSN 0969-2126 JRNL PMID 35472306 JRNL DOI 10.1016/J.STR.2022.04.001 REMARK 2 REMARK 2 RESOLUTION. 3.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 13590 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.254 REMARK 3 R VALUE (WORKING SET) : 0.252 REMARK 3 FREE R VALUE : 0.297 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 716 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.49 REMARK 3 REFLECTION IN BIN (WORKING SET) : 990 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.3580 REMARK 3 BIN FREE R VALUE SET COUNT : 52 REMARK 3 BIN FREE R VALUE : 0.3610 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3533 REMARK 3 NUCLEIC ACID ATOMS : 1517 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 136.6 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.44000 REMARK 3 B22 (A**2) : 8.72000 REMARK 3 B33 (A**2) : -6.27000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.627 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.574 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 86.495 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.944 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5382 ; 0.002 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 4267 ; 0.002 ; 0.018 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7450 ; 1.022 ; 1.490 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9921 ; 1.134 ; 1.870 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 785 ; 4.405 ; 5.527 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 234 ;24.827 ;20.256 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 697 ;14.696 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 46 ;10.847 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 752 ; 0.173 ; 0.226 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4880 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1193 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 233 A 290 REMARK 3 ORIGIN FOR THE GROUP (A): -6.0006 -49.8819 -36.3841 REMARK 3 T TENSOR REMARK 3 T11: 0.0568 T22: 0.4989 REMARK 3 T33: 0.2722 T12: 0.0054 REMARK 3 T13: 0.1205 T23: -0.0297 REMARK 3 L TENSOR REMARK 3 L11: 0.2990 L22: 0.3527 REMARK 3 L33: 3.4614 L12: -0.3208 REMARK 3 L13: 0.2917 L23: -0.4764 REMARK 3 S TENSOR REMARK 3 S11: 0.0342 S12: 0.0847 S13: 0.0008 REMARK 3 S21: -0.0383 S22: -0.1416 S23: -0.0100 REMARK 3 S31: 0.1121 S32: 1.1601 S33: 0.1074 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 41 B 132 REMARK 3 ORIGIN FOR THE GROUP (A): -17.9053 -41.0851 -30.7132 REMARK 3 T TENSOR REMARK 3 T11: 0.3932 T22: 0.3848 REMARK 3 T33: 0.2418 T12: -0.0099 REMARK 3 T13: 0.1006 T23: 0.0031 REMARK 3 L TENSOR REMARK 3 L11: 0.7205 L22: 0.9719 REMARK 3 L33: 2.8102 L12: -0.2117 REMARK 3 L13: 0.9392 L23: 0.1705 REMARK 3 S TENSOR REMARK 3 S11: 0.0326 S12: 0.0630 S13: -0.0804 REMARK 3 S21: 0.0082 S22: -0.1023 S23: -0.0847 REMARK 3 S31: -0.2961 S32: 0.2803 S33: 0.0697 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 48 C 164 REMARK 3 ORIGIN FOR THE GROUP (A): -21.0276 -40.3394 -37.7459 REMARK 3 T TENSOR REMARK 3 T11: 0.4739 T22: 0.4067 REMARK 3 T33: 0.2663 T12: 0.0660 REMARK 3 T13: 0.0810 T23: 0.0086 REMARK 3 L TENSOR REMARK 3 L11: 0.7986 L22: 0.4348 REMARK 3 L33: 1.5787 L12: 0.1983 REMARK 3 L13: 0.1482 L23: 0.7368 REMARK 3 S TENSOR REMARK 3 S11: -0.0317 S12: 0.0203 S13: -0.0436 REMARK 3 S21: -0.0452 S22: -0.0666 S23: 0.0006 REMARK 3 S31: -0.2815 S32: 0.0730 S33: 0.0982 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 38 D 130 REMARK 3 ORIGIN FOR THE GROUP (A): -20.7045 -12.0849 -14.0288 REMARK 3 T TENSOR REMARK 3 T11: 0.3444 T22: 0.5805 REMARK 3 T33: 0.2891 T12: -0.1000 REMARK 3 T13: 0.1017 T23: 0.1704 REMARK 3 L TENSOR REMARK 3 L11: 0.0721 L22: 0.8056 REMARK 3 L33: 0.4988 L12: -0.1635 REMARK 3 L13: 0.1559 L23: -0.4273 REMARK 3 S TENSOR REMARK 3 S11: 0.0170 S12: 0.0095 S13: 0.0732 REMARK 3 S21: 0.0142 S22: -0.3197 S23: -0.1747 REMARK 3 S31: 0.0009 S32: 0.2951 S33: 0.3028 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 61 E 128 REMARK 3 ORIGIN FOR THE GROUP (A): -7.5748 -8.0451 -13.1419 REMARK 3 T TENSOR REMARK 3 T11: 0.3721 T22: 0.5673 REMARK 3 T33: 0.3596 T12: -0.1690 REMARK 3 T13: 0.0332 T23: 0.1855 REMARK 3 L TENSOR REMARK 3 L11: 0.0949 L22: 2.2053 REMARK 3 L33: 1.7409 L12: 0.3051 REMARK 3 L13: -0.2269 L23: -1.7686 REMARK 3 S TENSOR REMARK 3 S11: -0.1426 S12: 0.0334 S13: -0.1030 REMARK 3 S21: 0.0560 S22: -0.0454 S23: -0.4961 REMARK 3 S31: -0.0752 S32: 0.1138 S33: 0.1880 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 1 F 37 REMARK 3 ORIGIN FOR THE GROUP (A): -19.2881 -46.1575 -10.7907 REMARK 3 T TENSOR REMARK 3 T11: 0.3938 T22: 0.3327 REMARK 3 T33: 0.1634 T12: 0.0467 REMARK 3 T13: 0.0574 T23: 0.0643 REMARK 3 L TENSOR REMARK 3 L11: 0.3001 L22: 1.5181 REMARK 3 L33: 3.4729 L12: 0.1665 REMARK 3 L13: 0.3733 L23: 2.2075 REMARK 3 S TENSOR REMARK 3 S11: 0.0782 S12: -0.0476 S13: -0.0899 REMARK 3 S21: 0.1306 S22: -0.1260 S23: 0.0056 REMARK 3 S31: 0.2484 S32: 0.0437 S33: 0.0478 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : G 1 G 37 REMARK 3 ORIGIN FOR THE GROUP (A): -17.8548 -48.2170 -15.9251 REMARK 3 T TENSOR REMARK 3 T11: 0.3432 T22: 0.3426 REMARK 3 T33: 0.2251 T12: 0.0662 REMARK 3 T13: 0.0406 T23: 0.0925 REMARK 3 L TENSOR REMARK 3 L11: 0.5739 L22: 0.9262 REMARK 3 L33: 2.5722 L12: -0.1009 REMARK 3 L13: 0.1899 L23: 0.9355 REMARK 3 S TENSOR REMARK 3 S11: 0.1822 S12: -0.1321 S13: -0.1299 REMARK 3 S21: 0.1684 S22: -0.0369 S23: -0.2624 REMARK 3 S31: 0.3516 S32: 0.0484 S33: -0.1453 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 7AW7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-NOV-20. REMARK 100 THE DEPOSITION ID IS D_1292112187. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-APR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14326 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.400 REMARK 200 RESOLUTION RANGE LOW (A) : 47.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.50 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.60 REMARK 200 R MERGE FOR SHELL (I) : 0.52700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6Y37, 5VPE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM FLUORIDE, 20% PEG3350, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 38.07500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 66.57500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 99.89500 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 38.07500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 66.57500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 99.89500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 38.07500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 66.57500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 99.89500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 38.07500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 66.57500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 99.89500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEPTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEPTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 23260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -184.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 230 REMARK 465 GLU A 231 REMARK 465 SER A 232 REMARK 465 ALA A 291 REMARK 465 ASP A 292 REMARK 465 GLU A 293 REMARK 465 MET C 46 REMARK 465 GLY C 47 REMARK 465 GLY D 36 REMARK 465 SER D 37 REMARK 465 ALA D 131 REMARK 465 LEU D 132 REMARK 465 GLU D 133 REMARK 465 GLY E 36 REMARK 465 SER E 37 REMARK 465 VAL E 38 REMARK 465 THR E 39 REMARK 465 SER E 40 REMARK 465 LYS E 41 REMARK 465 GLU E 42 REMARK 465 TRP E 43 REMARK 465 ILE E 44 REMARK 465 ILE E 45 REMARK 465 PRO E 46 REMARK 465 PRO E 47 REMARK 465 ARG E 48 REMARK 465 PRO E 49 REMARK 465 LYS E 50 REMARK 465 PRO E 51 REMARK 465 GLY E 52 REMARK 465 ARG E 53 REMARK 465 LYS E 54 REMARK 465 PRO E 55 REMARK 465 ALA E 56 REMARK 465 THR E 57 REMARK 465 ASP E 58 REMARK 465 THR E 59 REMARK 465 PRO E 60 REMARK 465 SER E 129 REMARK 465 HIS E 130 REMARK 465 ALA E 131 REMARK 465 LEU E 132 REMARK 465 GLU E 133 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 269 -56.58 -126.49 REMARK 500 ARG A 280 112.21 -26.98 REMARK 500 PHE B 116 48.08 -103.72 REMARK 500 SER C 77 -80.25 -103.97 REMARK 500 PRO C 100 1.67 -69.74 REMARK 500 LYS C 103 -75.33 -117.87 REMARK 500 LYS C 136 70.62 52.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6Y37 RELATED DB: PDB REMARK 900 RELATED ID: 7AW9 RELATED DB: PDB REMARK 900 RELATED ID: 6Y36 RELATED DB: PDB DBREF 7AW7 A 231 293 UNP G5EAZ0 G5EAZ0_EMENI 231 293 DBREF 7AW7 B 42 132 UNP Q5B5Z6 Q5B5Z6_EMENI 42 132 DBREF 7AW7 C 47 164 UNP Q5AYY8 Q5AYY8_EMENI 47 164 DBREF 7AW7 D 36 133 UNP G5EAX9 G5EAX9_EMENI 36 133 DBREF 7AW7 E 36 133 UNP G5EAX9 G5EAX9_EMENI 36 133 DBREF 7AW7 F 1 37 PDB 7AW7 7AW7 1 37 DBREF 7AW7 G 1 37 PDB 7AW7 7AW7 1 37 SEQADV 7AW7 MET A 230 UNP G5EAZ0 INITIATING METHIONINE SEQADV 7AW7 MET B 41 UNP Q5B5Z6 INITIATING METHIONINE SEQADV 7AW7 MET C 46 UNP Q5AYY8 INITIATING METHIONINE SEQADV 7AW7 LYS D 92 UNP G5EAX9 CYS 92 ENGINEERED MUTATION SEQADV 7AW7 SER D 129 UNP G5EAX9 CYS 129 ENGINEERED MUTATION SEQADV 7AW7 LYS E 92 UNP G5EAX9 CYS 92 ENGINEERED MUTATION SEQADV 7AW7 SER E 129 UNP G5EAX9 CYS 129 ENGINEERED MUTATION SEQRES 1 A 64 MET GLU SER PRO LEU TYR VAL ASN ALA LYS GLN PHE HIS SEQRES 2 A 64 ARG ILE LEU LYS ARG ARG VAL ALA ARG GLN LYS LEU GLU SEQRES 3 A 64 GLU GLN LEU ARG LEU THR SER LYS GLY ARG LYS PRO TYR SEQRES 4 A 64 LEU HIS GLU SER ARG HIS ASN HIS ALA MET ARG ARG PRO SEQRES 5 A 64 ARG GLY PRO GLY GLY ARG PHE LEU THR ALA ASP GLU SEQRES 1 B 92 MET LYS GLU GLN ASP ARG TRP LEU PRO ILE ALA ASN VAL SEQRES 2 B 92 ALA ARG ILE MET LYS LEU ALA LEU PRO GLU ASN ALA LYS SEQRES 3 B 92 ILE ALA LYS GLU ALA LYS GLU CYS MET GLN GLU CYS VAL SEQRES 4 B 92 SER GLU PHE ILE SER PHE ILE THR SER GLU ALA SER GLU SEQRES 5 B 92 LYS CYS GLN GLN GLU LYS ARG LYS THR VAL ASN GLY GLU SEQRES 6 B 92 ASP ILE LEU PHE ALA MET THR SER LEU GLY PHE GLU ASN SEQRES 7 B 92 TYR ALA GLU ALA LEU LYS ILE TYR LEU SER LYS TYR ARG SEQRES 8 B 92 GLU SEQRES 1 C 119 MET GLY THR TRP ALA ASN VAL ASN GLN GLY LEU GLN GLY SEQRES 2 C 119 THR ALA ARG ASP ILE LEU THR THR TYR TRP GLN HIS VAL SEQRES 3 C 119 ILE ASN HIS LEU GLU SER ASP ASN HIS ASP TYR LYS ILE SEQRES 4 C 119 HIS GLN LEU PRO LEU ALA ARG ILE LYS LYS VAL MET LYS SEQRES 5 C 119 ALA ASP PRO GLU VAL LYS MET ILE SER ALA GLU ALA PRO SEQRES 6 C 119 ILE LEU PHE ALA LYS GLY CYS ASP VAL PHE ILE THR GLU SEQRES 7 C 119 LEU THR MET ARG ALA TRP ILE HIS ALA GLU ASP ASN LYS SEQRES 8 C 119 ARG ARG THR LEU GLN ARG SER ASP ILE ALA ALA ALA LEU SEQRES 9 C 119 SER LYS SER ASP MET PHE ASP PHE LEU ILE ASP ILE VAL SEQRES 10 C 119 PRO ARG SEQRES 1 D 98 GLY SER VAL THR SER LYS GLU TRP ILE ILE PRO PRO ARG SEQRES 2 D 98 PRO LYS PRO GLY ARG LYS PRO ALA THR ASP THR PRO PRO SEQRES 3 D 98 THR LYS ARG LYS ALA GLN ASN ARG ALA ALA GLN ARG ALA SEQRES 4 D 98 PHE ARG GLU ARG ARG ALA ALA ARG VAL SER GLU LEU GLU SEQRES 5 D 98 ASP GLN ILE LYS LYS ILE GLU ASP ASP HIS GLU ILE HIS SEQRES 6 D 98 VAL ALA THR PHE LYS GLU GLN ILE ALA ASN LEU SER ARG SEQRES 7 D 98 GLU VAL GLU GLN CYS ARG THR GLU MET GLY TRP TRP ARG SEQRES 8 D 98 ASP ARG SER HIS ALA LEU GLU SEQRES 1 E 98 GLY SER VAL THR SER LYS GLU TRP ILE ILE PRO PRO ARG SEQRES 2 E 98 PRO LYS PRO GLY ARG LYS PRO ALA THR ASP THR PRO PRO SEQRES 3 E 98 THR LYS ARG LYS ALA GLN ASN ARG ALA ALA GLN ARG ALA SEQRES 4 E 98 PHE ARG GLU ARG ARG ALA ALA ARG VAL SER GLU LEU GLU SEQRES 5 E 98 ASP GLN ILE LYS LYS ILE GLU ASP ASP HIS GLU ILE HIS SEQRES 6 E 98 VAL ALA THR PHE LYS GLU GLN ILE ALA ASN LEU SER ARG SEQRES 7 E 98 GLU VAL GLU GLN CYS ARG THR GLU MET GLY TRP TRP ARG SEQRES 8 E 98 ASP ARG SER HIS ALA LEU GLU SEQRES 1 F 37 DT DT DG DC DG DG DG DT DT DG DG DT DA SEQRES 2 F 37 DA DT DC DA DC DT DT DC DG DC DT DC DT SEQRES 3 F 37 DG DA DT DT DG DG DC DT DC DG DG SEQRES 1 G 37 DA DA DC DC DG DA DG DC DC DA DA DT DC SEQRES 2 G 37 DA DG DA DG DC DG DA DA DG DT DG DA DT SEQRES 3 G 37 DT DA DC DC DA DA DC DC DC DG DC HET NA C 201 1 HET NA C 202 1 HET CL C 203 1 HETNAM NA SODIUM ION HETNAM CL CHLORIDE ION FORMUL 8 NA 2(NA 1+) FORMUL 10 CL CL 1- HELIX 1 AA1 ASN A 237 LEU A 258 1 22 HELIX 2 AA2 HIS A 270 ARG A 280 1 11 HELIX 3 AA3 GLU B 43 TRP B 47 5 5 HELIX 4 AA4 PRO B 49 LEU B 61 1 13 HELIX 5 AA5 ALA B 68 LYS B 98 1 31 HELIX 6 AA6 ASN B 103 LEU B 114 1 12 HELIX 7 AA7 PHE B 116 GLU B 132 1 17 HELIX 8 AA8 THR C 59 SER C 77 1 19 HELIX 9 AA9 PRO C 88 LYS C 97 1 10 HELIX 10 AB1 ALA C 107 ASN C 135 1 29 HELIX 11 AB2 GLN C 141 SER C 150 1 10 HELIX 12 AB3 SER C 152 ILE C 159 5 8 HELIX 13 AB4 THR D 62 GLU D 85 1 24 HELIX 14 AB5 GLU D 85 HIS D 130 1 46 HELIX 15 AB6 THR E 62 TRP E 125 1 64 SHEET 1 AA1 2 LYS B 66 ILE B 67 0 SHEET 2 AA1 2 THR C 139 LEU C 140 1 O LEU C 140 N LYS B 66 SHEET 1 AA2 2 THR B 101 VAL B 102 0 SHEET 2 AA2 2 MET C 104 ILE C 105 1 O MET C 104 N VAL B 102 CRYST1 76.150 133.150 199.790 90.00 90.00 90.00 I 2 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013132 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007510 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005005 0.00000