HEADER CHAPERONE 10-NOV-20 7AXY TITLE CRYSTAL STRUCTURE OF A SHORTENED IPGC VARIANT IN COMPLEX WITH 3-AMINO- TITLE 2 5-(PYRROLIDIN-1-YL)-1H-PYRAZOLE-4-CARBONITRILE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHAPERONE PROTEIN IPGC; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SHIGELLA FLEXNERI; SOURCE 3 ORGANISM_TAXID: 623; SOURCE 4 GENE: IPGC, IPPI, CP0129; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS IPGC, DIMER, CHAPERONE, SHIGELLA, MUTANT, MAGNESIUM, CHLORINE, 3- KEYWDS 2 AMINO-5-(PYRROLIDIN-1-YL)-1H-PYRAZOLE-4-CARBONITRILE EXPDTA X-RAY DIFFRACTION AUTHOR M.GARDONYI,A.HEINE,G.KLEBE REVDAT 2 31-JAN-24 7AXY 1 REMARK REVDAT 1 24-NOV-21 7AXY 0 JRNL AUTH M.GARDONYI,A.HEINE,G.KLEBE JRNL TITL CRYSTAL STRUCTURE OF A SHORTENED IPGC VARIANT IN COMPLEX JRNL TITL 2 WITH 3-AMINO-5-(PYRROLIDIN-1-YL)-1H-PYRAZOLE-4-CARBONITRILE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.63 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.63 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.24 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 38953 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1947 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 1.6700 - 1.6300 0.99 2580 136 0.2915 0.3822 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.195 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.710 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.29 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2154 REMARK 3 ANGLE : 0.765 2926 REMARK 3 CHIRALITY : 0.049 320 REMARK 3 PLANARITY : 0.005 388 REMARK 3 DIHEDRAL : 14.339 1280 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 18 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 25 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.5347 14.2709 -1.9428 REMARK 3 T TENSOR REMARK 3 T11: 0.3059 T22: 0.6242 REMARK 3 T33: 0.5546 T12: -0.0510 REMARK 3 T13: 0.0917 T23: -0.0368 REMARK 3 L TENSOR REMARK 3 L11: 0.5913 L22: 0.3146 REMARK 3 L33: 2.2536 L12: 0.0044 REMARK 3 L13: 1.1168 L23: -0.1744 REMARK 3 S TENSOR REMARK 3 S11: -0.2273 S12: -0.0272 S13: -0.6029 REMARK 3 S21: -0.1313 S22: -0.3886 S23: 0.1929 REMARK 3 S31: -0.0753 S32: -0.6764 S33: -0.1251 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 33 THROUGH 39 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.4216 22.8039 -5.7919 REMARK 3 T TENSOR REMARK 3 T11: 0.3225 T22: 0.3918 REMARK 3 T33: 0.2911 T12: 0.0674 REMARK 3 T13: -0.0215 T23: -0.0699 REMARK 3 L TENSOR REMARK 3 L11: 0.0445 L22: 0.0020 REMARK 3 L33: 0.0055 L12: -0.0052 REMARK 3 L13: -0.0137 L23: 0.0032 REMARK 3 S TENSOR REMARK 3 S11: 0.0098 S12: 0.1559 S13: -0.0777 REMARK 3 S21: -0.1724 S22: -0.2608 S23: 0.0991 REMARK 3 S31: -0.1980 S32: -0.5290 S33: 0.0007 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 40 THROUGH 53 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.7247 23.7243 -7.4557 REMARK 3 T TENSOR REMARK 3 T11: 0.3721 T22: 0.2380 REMARK 3 T33: 0.2573 T12: -0.0731 REMARK 3 T13: -0.0275 T23: 0.0025 REMARK 3 L TENSOR REMARK 3 L11: 0.6798 L22: 0.0079 REMARK 3 L33: 0.5474 L12: -0.0575 REMARK 3 L13: 0.3594 L23: -0.0056 REMARK 3 S TENSOR REMARK 3 S11: -0.4679 S12: 0.0347 S13: 0.2288 REMARK 3 S21: -0.2315 S22: 0.2108 S23: 0.1000 REMARK 3 S31: -0.5970 S32: -0.0415 S33: -0.0236 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 9 THROUGH 21 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.6137 2.3215 -4.1390 REMARK 3 T TENSOR REMARK 3 T11: 0.4034 T22: 0.2356 REMARK 3 T33: 0.2832 T12: -0.0851 REMARK 3 T13: -0.0224 T23: 0.0498 REMARK 3 L TENSOR REMARK 3 L11: 0.1360 L22: 0.1071 REMARK 3 L33: 0.0460 L12: -0.1206 REMARK 3 L13: 0.0201 L23: -0.0259 REMARK 3 S TENSOR REMARK 3 S11: 0.2209 S12: -0.1127 S13: 0.0370 REMARK 3 S21: 0.5590 S22: -0.2614 S23: -0.4225 REMARK 3 S31: 0.0992 S32: 0.3260 S33: 0.0007 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 28 THROUGH 33 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.1317 -13.5519 -2.7666 REMARK 3 T TENSOR REMARK 3 T11: 0.4051 T22: 0.7212 REMARK 3 T33: 0.7608 T12: 0.0473 REMARK 3 T13: -0.1429 T23: 0.0940 REMARK 3 L TENSOR REMARK 3 L11: 0.0394 L22: 0.0455 REMARK 3 L33: 0.0032 L12: 0.0143 REMARK 3 L13: 0.0084 L23: 0.0115 REMARK 3 S TENSOR REMARK 3 S11: 0.0580 S12: -0.0598 S13: 0.2618 REMARK 3 S21: 0.2262 S22: -0.2146 S23: -0.1670 REMARK 3 S31: 0.3988 S32: 0.3189 S33: 0.0015 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 34 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.0688 -20.9532 -9.5814 REMARK 3 T TENSOR REMARK 3 T11: 0.3369 T22: 0.2773 REMARK 3 T33: 0.2323 T12: -0.0178 REMARK 3 T13: 0.0427 T23: -0.0146 REMARK 3 L TENSOR REMARK 3 L11: 0.1265 L22: 0.2423 REMARK 3 L33: 0.1809 L12: 0.0960 REMARK 3 L13: -0.1510 L23: -0.1109 REMARK 3 S TENSOR REMARK 3 S11: -0.0464 S12: 0.3574 S13: -0.3926 REMARK 3 S21: -0.2299 S22: -0.0133 S23: -0.0711 REMARK 3 S31: 0.5452 S32: 0.0492 S33: 0.0001 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 52 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.9905 -11.2544 -6.7438 REMARK 3 T TENSOR REMARK 3 T11: 0.3033 T22: 0.1834 REMARK 3 T33: 0.1872 T12: -0.0245 REMARK 3 T13: 0.0395 T23: 0.0136 REMARK 3 L TENSOR REMARK 3 L11: 0.1007 L22: 0.1252 REMARK 3 L33: 0.3679 L12: -0.1141 REMARK 3 L13: 0.1940 L23: -0.2196 REMARK 3 S TENSOR REMARK 3 S11: -0.0345 S12: 0.3154 S13: 0.0255 REMARK 3 S21: 0.0636 S22: 0.0787 S23: -0.1000 REMARK 3 S31: -0.1146 S32: 0.0040 S33: 0.0021 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 69 THROUGH 98 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.5407 -7.0330 -16.0261 REMARK 3 T TENSOR REMARK 3 T11: 0.2451 T22: 0.2328 REMARK 3 T33: 0.2217 T12: -0.0339 REMARK 3 T13: 0.0109 T23: 0.0057 REMARK 3 L TENSOR REMARK 3 L11: 0.4926 L22: 0.7445 REMARK 3 L33: 0.5924 L12: 0.4739 REMARK 3 L13: 0.0716 L23: -0.3601 REMARK 3 S TENSOR REMARK 3 S11: -0.0801 S12: 0.0585 S13: 0.2168 REMARK 3 S21: -0.0898 S22: 0.0631 S23: 0.0831 REMARK 3 S31: 0.0798 S32: -0.1124 S33: 0.0002 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 99 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.4156 -5.6439 -24.7245 REMARK 3 T TENSOR REMARK 3 T11: 0.4039 T22: 0.4360 REMARK 3 T33: 0.4229 T12: -0.0187 REMARK 3 T13: 0.0523 T23: -0.0166 REMARK 3 L TENSOR REMARK 3 L11: 0.0179 L22: 0.0344 REMARK 3 L33: 0.0364 L12: -0.0242 REMARK 3 L13: 0.0052 L23: 0.0035 REMARK 3 S TENSOR REMARK 3 S11: -0.2144 S12: -0.0850 S13: 0.0199 REMARK 3 S21: -0.1407 S22: 0.4450 S23: -0.5714 REMARK 3 S31: 0.0256 S32: 0.3283 S33: -0.0013 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 54 THROUGH 78 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.0885 13.8161 -7.0757 REMARK 3 T TENSOR REMARK 3 T11: 0.2155 T22: 0.1805 REMARK 3 T33: 0.1887 T12: -0.0462 REMARK 3 T13: 0.0061 T23: -0.0253 REMARK 3 L TENSOR REMARK 3 L11: 0.0256 L22: 0.6443 REMARK 3 L33: 0.2239 L12: 0.1319 REMARK 3 L13: 0.0416 L23: 0.1758 REMARK 3 S TENSOR REMARK 3 S11: -0.0299 S12: -0.0757 S13: 0.0256 REMARK 3 S21: -0.0421 S22: -0.0625 S23: 0.0948 REMARK 3 S31: -0.0546 S32: -0.0642 S33: 0.0000 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 79 THROUGH 85 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.0890 11.8260 -9.2918 REMARK 3 T TENSOR REMARK 3 T11: 0.2292 T22: 0.3072 REMARK 3 T33: 0.2376 T12: -0.0868 REMARK 3 T13: -0.0044 T23: -0.0162 REMARK 3 L TENSOR REMARK 3 L11: 0.0028 L22: 0.0975 REMARK 3 L33: 0.0063 L12: -0.0127 REMARK 3 L13: 0.0043 L23: -0.0226 REMARK 3 S TENSOR REMARK 3 S11: 0.1759 S12: -0.6499 S13: 0.0866 REMARK 3 S21: 0.1323 S22: -0.0869 S23: -0.0997 REMARK 3 S31: 0.0493 S32: 0.2406 S33: 0.0010 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 86 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.8549 5.0327 -11.4143 REMARK 3 T TENSOR REMARK 3 T11: 0.3364 T22: 0.2916 REMARK 3 T33: 0.3125 T12: -0.0458 REMARK 3 T13: 0.0244 T23: 0.0443 REMARK 3 L TENSOR REMARK 3 L11: 0.0150 L22: 0.0321 REMARK 3 L33: 0.0229 L12: -0.0135 REMARK 3 L13: -0.0080 L23: 0.0265 REMARK 3 S TENSOR REMARK 3 S11: -0.1689 S12: -0.1272 S13: -0.6951 REMARK 3 S21: -0.2004 S22: 0.0346 S23: -0.5114 REMARK 3 S31: -0.2998 S32: 0.1185 S33: -0.0016 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 90 THROUGH 121 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.9282 5.6711 -19.4381 REMARK 3 T TENSOR REMARK 3 T11: 0.2382 T22: 0.1658 REMARK 3 T33: 0.2108 T12: -0.0472 REMARK 3 T13: 0.0289 T23: -0.0013 REMARK 3 L TENSOR REMARK 3 L11: 0.3256 L22: 0.4375 REMARK 3 L33: 0.3651 L12: 0.3758 REMARK 3 L13: -0.2202 L23: -0.3044 REMARK 3 S TENSOR REMARK 3 S11: -0.0411 S12: 0.0902 S13: -0.1132 REMARK 3 S21: -0.1194 S22: 0.0297 S23: 0.0337 REMARK 3 S31: 0.0372 S32: -0.1164 S33: -0.0024 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 122 THROUGH 134 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.2234 3.5471 -29.1189 REMARK 3 T TENSOR REMARK 3 T11: 0.2951 T22: 0.2196 REMARK 3 T33: 0.2411 T12: -0.1107 REMARK 3 T13: 0.0344 T23: -0.0279 REMARK 3 L TENSOR REMARK 3 L11: 1.2001 L22: 0.1015 REMARK 3 L33: 0.2188 L12: -0.2100 REMARK 3 L13: -0.3394 L23: -0.0265 REMARK 3 S TENSOR REMARK 3 S11: -0.0780 S12: 0.4133 S13: -0.0854 REMARK 3 S21: -0.2325 S22: 0.0595 S23: -0.0260 REMARK 3 S31: 0.2520 S32: -0.2568 S33: -0.0172 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 135 THROUGH 151 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.8224 10.8370 -30.9960 REMARK 3 T TENSOR REMARK 3 T11: 0.2952 T22: 0.3063 REMARK 3 T33: 0.2781 T12: -0.0866 REMARK 3 T13: 0.0147 T23: 0.0315 REMARK 3 L TENSOR REMARK 3 L11: 0.1994 L22: 0.4952 REMARK 3 L33: 0.1835 L12: 0.0974 REMARK 3 L13: -0.0242 L23: 0.0782 REMARK 3 S TENSOR REMARK 3 S11: -0.0150 S12: 0.6261 S13: 0.1831 REMARK 3 S21: -0.3444 S22: -0.0420 S23: -0.1282 REMARK 3 S31: -0.1361 S32: 0.0255 S33: -0.0002 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 104 THROUGH 124 ) REMARK 3 ORIGIN FOR THE GROUP (A): -38.2629 -2.7027 -25.7885 REMARK 3 T TENSOR REMARK 3 T11: 0.3786 T22: 0.3220 REMARK 3 T33: 0.3373 T12: 0.0106 REMARK 3 T13: -0.0189 T23: 0.0078 REMARK 3 L TENSOR REMARK 3 L11: 0.1443 L22: 0.0376 REMARK 3 L33: 0.2646 L12: -0.0182 REMARK 3 L13: 0.1396 L23: -0.0869 REMARK 3 S TENSOR REMARK 3 S11: 0.0554 S12: 0.0834 S13: 0.0414 REMARK 3 S21: -0.2667 S22: -0.0480 S23: 0.1553 REMARK 3 S31: -0.1660 S32: -0.3455 S33: 0.0001 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 125 THROUGH 134 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.7793 -2.0490 -33.7846 REMARK 3 T TENSOR REMARK 3 T11: 0.4088 T22: 0.3699 REMARK 3 T33: 0.3123 T12: -0.0732 REMARK 3 T13: -0.0223 T23: 0.0112 REMARK 3 L TENSOR REMARK 3 L11: 0.0810 L22: 0.0811 REMARK 3 L33: 0.0432 L12: 0.0570 REMARK 3 L13: -0.0220 L23: -0.0282 REMARK 3 S TENSOR REMARK 3 S11: -0.1500 S12: 0.3318 S13: 0.5324 REMARK 3 S21: -0.0728 S22: 0.2460 S23: -0.3299 REMARK 3 S31: -0.5519 S32: -0.0600 S33: 0.0005 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 135 THROUGH 150 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.7574 -8.1967 -35.7253 REMARK 3 T TENSOR REMARK 3 T11: 0.3884 T22: 0.4385 REMARK 3 T33: 0.3286 T12: -0.0684 REMARK 3 T13: -0.0139 T23: -0.0183 REMARK 3 L TENSOR REMARK 3 L11: 0.0621 L22: 0.2847 REMARK 3 L33: 0.2763 L12: 0.0233 REMARK 3 L13: -0.1308 L23: -0.0842 REMARK 3 S TENSOR REMARK 3 S11: 0.2048 S12: 0.3745 S13: -0.0044 REMARK 3 S21: -0.2717 S22: -0.2990 S23: -0.0165 REMARK 3 S31: 0.2959 S32: -0.2786 S33: 0.0010 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN 'A' AND (RESID 27 OR (RESID 28 REMARK 3 THROUGH 30 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR (RESID 31 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB OR NAME CG1 OR NAME CG2)) OR REMARK 3 RESID 32 OR (RESID 33 AND (NAME N OR NAME REMARK 3 CA OR NAME C OR NAME O OR NAME CB OR NAME REMARK 3 CG )) OR (RESID 34 THROUGH 35 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 )) OR RESID 36 THROUGH 40 OR RESID 42 REMARK 3 THROUGH 48 OR (RESID 49 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB OR REMARK 3 NAME CG )) OR RESID 50 THROUGH 51 OR REMARK 3 (RESID 52 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB OR NAME CG1 OR REMARK 3 NAME CG2)) OR (RESID 53 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB OR REMARK 3 NAME CG OR NAME CD )) OR RESID 54 THROUGH REMARK 3 69 OR RESID 71 THROUGH 72 OR RESID 74 REMARK 3 THROUGH 100 OR (RESID 101 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB OR REMARK 3 NAME CG OR NAME CD OR NAME CE )) OR RESID REMARK 3 102 THROUGH 114 OR (RESID 115 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 OR NAME CG )) OR RESID 116 THROUGH 117 OR REMARK 3 (RESID 118 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB OR NAME CG )) OR REMARK 3 RESID 119 THROUGH 120 OR (RESID 121 REMARK 3 THROUGH 123 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR (RESID REMARK 3 124 AND (NAME N OR NAME CA OR NAME C OR REMARK 3 NAME O OR NAME CB OR NAME CG OR NAME CD )) REMARK 3 OR RESID 125 THROUGH 130 OR (RESID 132 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB OR NAME CG )) OR RESID 133 REMARK 3 THROUGH 141 OR (RESID 142 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB OR REMARK 3 NAME CG OR NAME CD )) OR RESID 143 REMARK 3 THROUGH 149)) REMARK 3 SELECTION : (CHAIN 'B' AND (RESID 17 OR RESID 28 REMARK 3 THROUGH 40 OR RESID 42 THROUGH 43 OR REMARK 3 (RESID 44 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 45 REMARK 3 THROUGH 66 OR (RESID 67 THROUGH 68 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 69 OR RESID 71 REMARK 3 THROUGH 72 OR RESID 74 THROUGH 87 OR REMARK 3 (RESID 88 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB OR NAME CG OR NAME REMARK 3 CD )) OR RESID 89 THROUGH 130 OR RESID REMARK 3 132 THROUGH 149)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7AXY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-NOV-20. REMARK 100 THE DEPOSITION ID IS D_1292112246. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-DEC-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 1.02 REMARK 200 DATA SCALING SOFTWARE : XDS 1.02 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38957 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.630 REMARK 200 RESOLUTION RANGE LOW (A) : 42.240 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05100 REMARK 200 FOR THE DATA SET : 16.4200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.63 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.70000 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 7.0.047 REMARK 200 STARTING MODEL: 6SCB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 4000, 0.05 M TRIS (PH 7.0), REMARK 280 0.3 M MAGNESIUM CHLORIDE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 106.29667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 53.14833 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 53.14833 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 106.29667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 9 REMARK 465 SER A 10 REMARK 465 ILE A 11 REMARK 465 SER A 12 REMARK 465 THR A 13 REMARK 465 ALA A 14 REMARK 465 VAL A 15 REMARK 465 ILE A 16 REMARK 465 ASP A 17 REMARK 465 ALA A 18 REMARK 465 ILE A 19 REMARK 465 ASN A 20 REMARK 465 SER A 21 REMARK 465 GLY A 22 REMARK 465 ALA A 23 REMARK 465 THR A 24 REMARK 465 GLY B 22 REMARK 465 ALA B 23 REMARK 465 THR B 24 REMARK 465 LEU B 25 REMARK 465 LYS B 26 REMARK 465 ASP B 27 REMARK 465 GLN B 151 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 29 OD1 ND2 REMARK 470 ASP A 34 CG OD1 OD2 REMARK 470 TYR A 44 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 49 CE NZ REMARK 470 PHE A 67 CG CD1 CD2 CE1 CE2 CZ REMARK 470 TYR A 68 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLN A 88 OE1 NE2 REMARK 470 LYS A 118 CE NZ REMARK 470 GLU A 125 CG CD OE1 OE2 REMARK 470 LYS A 138 CE NZ REMARK 470 LYS A 142 NZ REMARK 470 ILE B 16 CD1 REMARK 470 SER B 21 OG REMARK 470 ILE B 28 CG1 CG2 CD1 REMARK 470 ASN B 29 CG OD1 ND2 REMARK 470 ILE B 31 CD1 REMARK 470 ASP B 33 OD1 OD2 REMARK 470 ASP B 34 CG OD1 OD2 REMARK 470 MET B 35 CG SD CE REMARK 470 LYS B 49 CD CE NZ REMARK 470 ILE B 52 CD1 REMARK 470 GLU B 53 OE1 OE2 REMARK 470 LYS B 101 NZ REMARK 470 LEU B 115 CD1 CD2 REMARK 470 LYS B 118 CD CE NZ REMARK 470 LEU B 121 CG CD1 CD2 REMARK 470 LYS B 122 CG CD CE NZ REMARK 470 LYS B 124 CE NZ REMARK 470 GLU B 125 CG CD OE1 OE2 REMARK 470 GLN B 132 CD OE1 NE2 REMARK 470 LYS B 138 CE NZ REMARK 470 LYS B 142 CE NZ REMARK 470 ILE B 150 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 101 -52.27 63.72 REMARK 500 TYR B 68 41.03 -92.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 387 O REMARK 620 2 HOH B 304 O 177.0 REMARK 620 3 HOH B 323 O 91.8 90.5 REMARK 620 4 HOH B 349 O 101.9 79.8 92.6 REMARK 620 5 HOH B 360 O 90.4 87.4 174.8 82.4 REMARK 620 6 HOH B 363 O 81.3 96.7 95.8 170.9 89.1 REMARK 620 N 1 2 3 4 5 DBREF 7AXY A 10 151 UNP P0A2U4 IPGC_SHIFL 10 151 DBREF 7AXY B 10 151 UNP P0A2U4 IPGC_SHIFL 10 151 SEQADV 7AXY GLY A 9 UNP P0A2U4 EXPRESSION TAG SEQADV 7AXY GLY B 9 UNP P0A2U4 EXPRESSION TAG SEQRES 1 A 143 GLY SER ILE SER THR ALA VAL ILE ASP ALA ILE ASN SER SEQRES 2 A 143 GLY ALA THR LEU LYS ASP ILE ASN ALA ILE PRO ASP ASP SEQRES 3 A 143 MET MET ASP ASP ILE TYR SER TYR ALA TYR ASP PHE TYR SEQRES 4 A 143 ASN LYS GLY ARG ILE GLU GLU ALA GLU VAL PHE PHE ARG SEQRES 5 A 143 PHE LEU CYS ILE TYR ASP PHE TYR ASN VAL ASP TYR ILE SEQRES 6 A 143 MET GLY LEU ALA ALA ILE TYR GLN ILE LYS GLU GLN PHE SEQRES 7 A 143 GLN GLN ALA ALA ASP LEU TYR ALA VAL ALA PHE ALA LEU SEQRES 8 A 143 GLY LYS ASN ASP TYR THR PRO VAL PHE HIS THR GLY GLN SEQRES 9 A 143 CYS GLN LEU ARG LEU LYS ALA PRO LEU LYS ALA LYS GLU SEQRES 10 A 143 CYS PHE GLU LEU VAL ILE GLN HIS SER ASN ASP GLU LYS SEQRES 11 A 143 LEU LYS ILE LYS ALA GLN SER TYR LEU ASP ALA ILE GLN SEQRES 1 B 143 GLY SER ILE SER THR ALA VAL ILE ASP ALA ILE ASN SER SEQRES 2 B 143 GLY ALA THR LEU LYS ASP ILE ASN ALA ILE PRO ASP ASP SEQRES 3 B 143 MET MET ASP ASP ILE TYR SER TYR ALA TYR ASP PHE TYR SEQRES 4 B 143 ASN LYS GLY ARG ILE GLU GLU ALA GLU VAL PHE PHE ARG SEQRES 5 B 143 PHE LEU CYS ILE TYR ASP PHE TYR ASN VAL ASP TYR ILE SEQRES 6 B 143 MET GLY LEU ALA ALA ILE TYR GLN ILE LYS GLU GLN PHE SEQRES 7 B 143 GLN GLN ALA ALA ASP LEU TYR ALA VAL ALA PHE ALA LEU SEQRES 8 B 143 GLY LYS ASN ASP TYR THR PRO VAL PHE HIS THR GLY GLN SEQRES 9 B 143 CYS GLN LEU ARG LEU LYS ALA PRO LEU LYS ALA LYS GLU SEQRES 10 B 143 CYS PHE GLU LEU VAL ILE GLN HIS SER ASN ASP GLU LYS SEQRES 11 B 143 LEU LYS ILE LYS ALA GLN SER TYR LEU ASP ALA ILE GLN HET CL A 201 1 HET DMS A 202 4 HET CL B 201 1 HET MG B 202 1 HET E9Q B 203 13 HETNAM CL CHLORIDE ION HETNAM DMS DIMETHYL SULFOXIDE HETNAM MG MAGNESIUM ION HETNAM E9Q 5-AZANYL-3-PYRROLIDIN-1-YL-1~{H}-PYRAZOLE-4- HETNAM 2 E9Q CARBONITRILE FORMUL 3 CL 2(CL 1-) FORMUL 4 DMS C2 H6 O S FORMUL 6 MG MG 2+ FORMUL 7 E9Q C8 H11 N5 FORMUL 8 HOH *180(H2 O) HELIX 1 AA1 LEU A 25 ASN A 29 5 5 HELIX 2 AA2 PRO A 32 LYS A 49 1 18 HELIX 3 AA3 ARG A 51 ASP A 66 1 16 HELIX 4 AA4 ASN A 69 LYS A 83 1 15 HELIX 5 AA5 GLN A 85 LYS A 101 1 17 HELIX 6 AA6 TYR A 104 LEU A 117 1 14 HELIX 7 AA7 ALA A 119 SER A 134 1 16 HELIX 8 AA8 ASP A 136 ILE A 150 1 15 HELIX 9 AA9 SER B 10 SER B 21 1 12 HELIX 10 AB1 PRO B 32 LYS B 49 1 18 HELIX 11 AB2 ARG B 51 ASP B 66 1 16 HELIX 12 AB3 ASN B 69 LYS B 83 1 15 HELIX 13 AB4 GLN B 85 GLY B 100 1 16 HELIX 14 AB5 TYR B 104 LEU B 117 1 14 HELIX 15 AB6 ALA B 119 SER B 134 1 16 HELIX 16 AB7 ASP B 136 ILE B 150 1 15 LINK O HOH A 387 MG MG B 202 6444 1555 2.25 LINK MG MG B 202 O HOH B 304 1555 1555 2.24 LINK MG MG B 202 O HOH B 323 1555 1555 2.13 LINK MG MG B 202 O HOH B 349 1555 1555 2.18 LINK MG MG B 202 O HOH B 360 1555 1555 2.34 LINK MG MG B 202 O HOH B 363 1555 1555 2.12 CRYST1 57.517 57.517 159.445 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017386 0.010038 0.000000 0.00000 SCALE2 0.000000 0.020076 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006272 0.00000