HEADER HYDROLASE 12-NOV-20 7AYP TITLE STRUCTURE OF A GH11 DOMAIN REFINED FROM THE X-RAY DIFFRACTION DATA OF TITLE 2 A GH11-CBM36-1 CRYSTAL. COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDO-1,4-BETA-XYLANASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.2.1.8; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: GH11-CBM36-1 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: UNCULTURED BACTERIUM; SOURCE 3 ORGANISM_TAXID: 77133; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MULTIDOMAIN PROTEIN, CARBOHYDRATE BINDING DOMAINS, GH11, INTERDOMAIN KEYWDS 2 INTERACTIONS, CARBOHYDRATE ESTERASES, ISOTHERMAL TITRATION KEYWDS 3 CALORIMETRY, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR V.ANYE,W.D.SCHUBERT REVDAT 3 31-JAN-24 7AYP 1 REMARK REVDAT 2 29-JUN-22 7AYP 1 JRNL REVDAT 1 25-NOV-20 7AYP 0 JRNL AUTH V.ANYE,R.F.KRUGER,W.D.SCHUBERT JRNL TITL STRUCTURAL AND BIOPHYSICAL CHARACTERIZATION OF THE JRNL TITL 2 MULTIDOMAIN XYLANASE XYL. JRNL REF PLOS ONE V. 17 69188 2022 JRNL REFN ESSN 1932-6203 JRNL PMID 35657930 JRNL DOI 10.1371/JOURNAL.PONE.0269188 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 54.11 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.336 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 39990 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.187 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.924 REMARK 3 FREE R VALUE TEST SET COUNT : 1969 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 10.0000 - 4.0967 1.00 2801 155 0.1591 0.1859 REMARK 3 2 4.0967 - 3.2518 1.00 2741 136 0.1533 0.1624 REMARK 3 3 3.2518 - 2.8408 1.00 2735 129 0.1864 0.2052 REMARK 3 4 2.8408 - 2.5811 1.00 2719 133 0.1883 0.1649 REMARK 3 5 2.5811 - 2.3961 1.00 2728 144 0.1903 0.2056 REMARK 3 6 2.3961 - 2.2548 1.00 2674 152 0.1748 0.2055 REMARK 3 7 2.2548 - 2.1419 1.00 2720 156 0.1727 0.1944 REMARK 3 8 2.1419 - 2.0486 1.00 2687 164 0.1653 0.1689 REMARK 3 9 2.0486 - 1.9698 1.00 2704 125 0.1636 0.1650 REMARK 3 10 1.9698 - 1.9018 1.00 2724 135 0.1616 0.2182 REMARK 3 11 1.9018 - 1.8423 1.00 2694 126 0.1675 0.1742 REMARK 3 12 1.8423 - 1.7896 1.00 2718 127 0.1715 0.1835 REMARK 3 13 1.7896 - 1.7425 1.00 2677 142 0.1806 0.1935 REMARK 3 14 1.7425 - 1.7100 1.00 2699 145 0.1985 0.2515 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.143 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.931 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.69 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.94 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1650 REMARK 3 ANGLE : 0.934 2237 REMARK 3 CHIRALITY : 0.062 221 REMARK 3 PLANARITY : 0.005 295 REMARK 3 DIHEDRAL : 6.914 935 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7AYP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-NOV-20. REMARK 100 THE DEPOSITION ID IS D_1292112303. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-DEC-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.65 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 65364 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.470 REMARK 200 RESOLUTION RANGE LOW (A) : 93.690 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 1.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.8100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.47 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 2DCJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NA ACETATE, (NH4)2SO4, PH 4.8, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293.16K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 27.11400 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 27.11400 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 27.11400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 630 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 29 REMARK 465 GLY A 234 REMARK 465 GLN A 235 REMARK 465 SER A 236 REMARK 465 GLY A 237 REMARK 465 ASN A 238 REMARK 465 GLN A 239 REMARK 465 GLY A 240 REMARK 465 GLY A 241 REMARK 465 ASN A 242 REMARK 465 GLN A 243 REMARK 465 GLY A 244 REMARK 465 GLY A 245 REMARK 465 ASN A 246 REMARK 465 GLN A 247 REMARK 465 GLY A 248 REMARK 465 GLY A 249 REMARK 465 ASN A 250 REMARK 465 GLN A 251 REMARK 465 GLY A 252 REMARK 465 GLY A 253 REMARK 465 ASN A 254 REMARK 465 THR A 255 REMARK 465 GLY A 256 REMARK 465 SER A 257 REMARK 465 GLN A 258 REMARK 465 THR A 259 REMARK 465 SER A 260 REMARK 465 GLY A 261 REMARK 465 ASN A 262 REMARK 465 GLU A 263 REMARK 465 THR A 264 REMARK 465 ILE A 265 REMARK 465 VAL A 266 REMARK 465 GLN A 267 REMARK 465 CYS A 268 REMARK 465 GLU A 269 REMARK 465 SER A 270 REMARK 465 MET A 271 REMARK 465 THR A 272 REMARK 465 LYS A 273 REMARK 465 GLY A 274 REMARK 465 GLY A 275 REMARK 465 GLN A 276 REMARK 465 TYR A 277 REMARK 465 THR A 278 REMARK 465 GLY A 279 REMARK 465 ASN A 280 REMARK 465 ILE A 281 REMARK 465 ASN A 282 REMARK 465 ASN A 283 REMARK 465 PRO A 284 REMARK 465 PHE A 285 REMARK 465 GLY A 286 REMARK 465 GLY A 287 REMARK 465 VAL A 288 REMARK 465 ALA A 289 REMARK 465 LEU A 290 REMARK 465 TYR A 291 REMARK 465 GLY A 292 REMARK 465 ASN A 293 REMARK 465 ASN A 294 REMARK 465 ASP A 295 REMARK 465 LYS A 296 REMARK 465 VAL A 297 REMARK 465 SER A 298 REMARK 465 TYR A 299 REMARK 465 THR A 300 REMARK 465 GLN A 301 REMARK 465 TYR A 302 REMARK 465 PHE A 303 REMARK 465 ALA A 304 REMARK 465 SER A 305 REMARK 465 GLY A 306 REMARK 465 THR A 307 REMARK 465 HIS A 308 REMARK 465 ASP A 309 REMARK 465 PHE A 310 REMARK 465 THR A 311 REMARK 465 LEU A 312 REMARK 465 ARG A 313 REMARK 465 GLY A 314 REMARK 465 CYS A 315 REMARK 465 SER A 316 REMARK 465 ASN A 317 REMARK 465 ASN A 318 REMARK 465 ASP A 319 REMARK 465 ASN A 320 REMARK 465 MET A 321 REMARK 465 ALA A 322 REMARK 465 ARG A 323 REMARK 465 VAL A 324 REMARK 465 ASP A 325 REMARK 465 LEU A 326 REMARK 465 LYS A 327 REMARK 465 ILE A 328 REMARK 465 GLY A 329 REMARK 465 GLY A 330 REMARK 465 GLU A 331 REMARK 465 THR A 332 REMARK 465 LYS A 333 REMARK 465 GLY A 334 REMARK 465 THR A 335 REMARK 465 PHE A 336 REMARK 465 TYR A 337 REMARK 465 TYR A 338 REMARK 465 GLY A 339 REMARK 465 GLY A 340 REMARK 465 SER A 341 REMARK 465 TYR A 342 REMARK 465 PRO A 343 REMARK 465 ALA A 344 REMARK 465 GLU A 345 REMARK 465 TYR A 346 REMARK 465 THR A 347 REMARK 465 ILE A 348 REMARK 465 LYS A 349 REMARK 465 ASN A 350 REMARK 465 VAL A 351 REMARK 465 ASN A 352 REMARK 465 HIS A 353 REMARK 465 GLY A 354 REMARK 465 THR A 355 REMARK 465 GLY A 356 REMARK 465 ASN A 357 REMARK 465 GLN A 358 REMARK 465 THR A 359 REMARK 465 ILE A 360 REMARK 465 GLU A 361 REMARK 465 LEU A 362 REMARK 465 VAL A 363 REMARK 465 VAL A 364 REMARK 465 THR A 365 REMARK 465 ALA A 366 REMARK 465 ASP A 367 REMARK 465 ASN A 368 REMARK 465 GLY A 369 REMARK 465 GLN A 370 REMARK 465 TRP A 371 REMARK 465 ASP A 372 REMARK 465 ALA A 373 REMARK 465 ASN A 374 REMARK 465 ILE A 375 REMARK 465 ASP A 376 REMARK 465 TYR A 377 REMARK 465 LEU A 378 REMARK 465 LYS A 379 REMARK 465 ILE A 380 REMARK 465 GLY A 381 REMARK 465 GLY A 382 REMARK 465 ALA A 383 REMARK 465 GLY A 384 REMARK 465 VAL A 385 REMARK 465 GLY A 386 REMARK 465 GLY A 387 REMARK 465 ASN A 388 REMARK 465 GLU A 389 REMARK 465 SER A 390 REMARK 465 SER A 391 REMARK 465 GLY A 392 REMARK 465 GLY A 393 REMARK 465 ASN A 394 REMARK 465 GLN A 395 REMARK 465 GLY A 396 REMARK 465 GLY A 397 REMARK 465 ASN A 398 REMARK 465 GLU A 399 REMARK 465 GLY A 400 REMARK 465 ASN A 401 REMARK 465 GLN A 402 REMARK 465 GLY A 403 REMARK 465 GLY A 404 REMARK 465 ASN A 405 REMARK 465 ALA A 406 REMARK 465 GLY A 407 REMARK 465 ASN A 408 REMARK 465 GLU A 409 REMARK 465 GLY A 410 REMARK 465 GLY A 411 REMARK 465 ASN A 412 REMARK 465 GLN A 413 REMARK 465 ALA A 414 REMARK 465 GLY A 415 REMARK 465 ASN A 416 REMARK 465 THR A 417 REMARK 465 GLY A 418 REMARK 465 ASN A 419 REMARK 465 GLN A 420 REMARK 465 GLY A 421 REMARK 465 GLY A 422 REMARK 465 ASN A 423 REMARK 465 GLU A 424 REMARK 465 GLY A 425 REMARK 465 ASN A 426 REMARK 465 ALA A 427 REMARK 465 GLY A 428 REMARK 465 GLY A 429 REMARK 465 GLN A 430 REMARK 465 ALA A 431 REMARK 465 GLN A 432 REMARK 465 SER A 433 REMARK 465 GLY A 434 REMARK 465 ASP A 435 REMARK 465 ASN A 436 REMARK 465 ILE A 437 REMARK 465 VAL A 438 REMARK 465 GLN A 439 REMARK 465 CYS A 440 REMARK 465 GLU A 441 REMARK 465 SER A 442 REMARK 465 MET A 443 REMARK 465 SER A 444 REMARK 465 LYS A 445 REMARK 465 ALA A 446 REMARK 465 GLY A 447 REMARK 465 GLN A 448 REMARK 465 TYR A 449 REMARK 465 THR A 450 REMARK 465 GLY A 451 REMARK 465 ASN A 452 REMARK 465 ILE A 453 REMARK 465 ASN A 454 REMARK 465 ASN A 455 REMARK 465 PRO A 456 REMARK 465 PHE A 457 REMARK 465 ASP A 458 REMARK 465 HIS A 459 REMARK 465 HIS A 460 REMARK 465 HIS A 461 REMARK 465 HIS A 462 REMARK 465 HIS A 463 REMARK 465 HIS A 464 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 233 CA C O CB OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 515 O HOH A 625 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 47 CA - CB - CG ANGL. DEV. = 15.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 72 -67.73 -91.00 REMARK 500 ASN A 225 82.68 -160.93 REMARK 500 SER A 232 -72.08 -108.96 REMARK 500 REMARK 500 REMARK: NULL DBREF1 7AYP A 29 458 UNP A0A140HJ20_9BACT DBREF2 7AYP A A0A140HJ20 29 458 SEQADV 7AYP HIS A 459 UNP A0A140HJ2 EXPRESSION TAG SEQADV 7AYP HIS A 460 UNP A0A140HJ2 EXPRESSION TAG SEQADV 7AYP HIS A 461 UNP A0A140HJ2 EXPRESSION TAG SEQADV 7AYP HIS A 462 UNP A0A140HJ2 EXPRESSION TAG SEQADV 7AYP HIS A 463 UNP A0A140HJ2 EXPRESSION TAG SEQADV 7AYP HIS A 464 UNP A0A140HJ2 EXPRESSION TAG SEQRES 1 A 436 ALA THR THR LEU TYR GLU ASN LYS THR GLY THR GLU ASP SEQRES 2 A 436 GLY TYR ASP TYR GLU LEU TRP LYS ASP SER GLY ASN THR SEQRES 3 A 436 SER MET ILE LEU ASN GLY GLY GLY THR PHE SER CYS GLN SEQRES 4 A 436 TRP SER ASN ILE ASN ASN CYS LEU PHE ARG LYS GLY LYS SEQRES 5 A 436 LYS PHE GLY GLY ASN GLN SER TYR GLN GLN ILE GLY ASN SEQRES 6 A 436 ILE SER PHE ASP TYR GLY CYS ASP TYR HIS PRO ASN GLY SEQRES 7 A 436 ASN SER TYR LEU CYS VAL TYR GLY TRP THR THR SER PRO SEQRES 8 A 436 LEU VAL GLU PHE TYR ILE VAL ASP SER TRP GLY SER TRP SEQRES 9 A 436 ARG PRO PRO GLY GLY SER PRO LYS GLY GLN ILE TYR VAL SEQRES 10 A 436 ASP GLY GLY THR TYR ASP VAL TYR GLU THR THR ARG VAL SEQRES 11 A 436 ASN GLN PRO SER ILE GLN GLY ASN THR THR PHE GLN GLN SEQRES 12 A 436 TYR PHE SER VAL ARG THR GLU ARG ARG THR SER GLY THR SEQRES 13 A 436 ILE ASN VAL THR GLU HIS PHE LYS ALA TRP GLU ARG MET SEQRES 14 A 436 GLY MET ARG MET GLY ASN ILE TYR GLU ALA ALA LEU ASN SEQRES 15 A 436 VAL GLU GLY TYR GLN SER SER GLY SER ALA ASN VAL TYR SEQRES 16 A 436 LYS ASN ASN MET THR ILE GLY GLY SER SER GLY GLN SER SEQRES 17 A 436 GLY ASN GLN GLY GLY ASN GLN GLY GLY ASN GLN GLY GLY SEQRES 18 A 436 ASN GLN GLY GLY ASN THR GLY SER GLN THR SER GLY ASN SEQRES 19 A 436 GLU THR ILE VAL GLN CYS GLU SER MET THR LYS GLY GLY SEQRES 20 A 436 GLN TYR THR GLY ASN ILE ASN ASN PRO PHE GLY GLY VAL SEQRES 21 A 436 ALA LEU TYR GLY ASN ASN ASP LYS VAL SER TYR THR GLN SEQRES 22 A 436 TYR PHE ALA SER GLY THR HIS ASP PHE THR LEU ARG GLY SEQRES 23 A 436 CYS SER ASN ASN ASP ASN MET ALA ARG VAL ASP LEU LYS SEQRES 24 A 436 ILE GLY GLY GLU THR LYS GLY THR PHE TYR TYR GLY GLY SEQRES 25 A 436 SER TYR PRO ALA GLU TYR THR ILE LYS ASN VAL ASN HIS SEQRES 26 A 436 GLY THR GLY ASN GLN THR ILE GLU LEU VAL VAL THR ALA SEQRES 27 A 436 ASP ASN GLY GLN TRP ASP ALA ASN ILE ASP TYR LEU LYS SEQRES 28 A 436 ILE GLY GLY ALA GLY VAL GLY GLY ASN GLU SER SER GLY SEQRES 29 A 436 GLY ASN GLN GLY GLY ASN GLU GLY ASN GLN GLY GLY ASN SEQRES 30 A 436 ALA GLY ASN GLU GLY GLY ASN GLN ALA GLY ASN THR GLY SEQRES 31 A 436 ASN GLN GLY GLY ASN GLU GLY ASN ALA GLY GLY GLN ALA SEQRES 32 A 436 GLN SER GLY ASP ASN ILE VAL GLN CYS GLU SER MET SER SEQRES 33 A 436 LYS ALA GLY GLN TYR THR GLY ASN ILE ASN ASN PRO PHE SEQRES 34 A 436 ASP HIS HIS HIS HIS HIS HIS FORMUL 2 HOH *136(H2 O) HELIX 1 AA1 SER A 87 GLY A 92 1 6 HELIX 2 AA2 VAL A 187 MET A 197 1 11 SHEET 1 AA1 6 THR A 31 LEU A 32 0 SHEET 2 AA1 6 ASN A 53 LEU A 58 -1 O MET A 56 N LEU A 32 SHEET 3 AA1 6 PHE A 64 SER A 69 -1 O SER A 69 N ASN A 53 SHEET 4 AA1 6 GLY A 218 ILE A 229 -1 O ALA A 220 N CYS A 66 SHEET 5 AA1 6 ILE A 94 PRO A 104 -1 N ASP A 97 O ASN A 226 SHEET 6 AA1 6 SER A 182 ASN A 186 -1 O GLY A 183 N TYR A 98 SHEET 1 AA2 9 LYS A 36 GLU A 40 0 SHEET 2 AA2 9 TYR A 43 LYS A 49 -1 O TYR A 43 N GLU A 40 SHEET 3 AA2 9 ASN A 73 LYS A 81 -1 O GLY A 79 N ASP A 44 SHEET 4 AA2 9 ASN A 203 TYR A 214 -1 O VAL A 211 N PHE A 76 SHEET 5 AA2 9 ASN A 107 THR A 117 -1 N CYS A 111 O ASN A 210 SHEET 6 AA2 9 VAL A 121 TRP A 129 -1 O SER A 128 N LEU A 110 SHEET 7 AA2 9 THR A 167 ARG A 176 1 O SER A 174 N VAL A 126 SHEET 8 AA2 9 GLY A 148 GLN A 160 -1 N ASP A 151 O VAL A 175 SHEET 9 AA2 9 GLY A 141 VAL A 145 -1 N GLY A 141 O VAL A 152 CISPEP 1 SER A 118 PRO A 119 0 6.73 CISPEP 2 PRO A 134 PRO A 135 0 1.25 CRYST1 108.216 108.216 54.228 90.00 90.00 120.00 P 63 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009241 0.005335 0.000000 0.00000 SCALE2 0.000000 0.010670 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018441 0.00000