HEADER HYDROLASE 01-DEC-20 7B3U TITLE OXA-10 BETA-LACTAMASE WITH COVALENT MODIFICATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE OXA-10; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: BETA-LACTAMASE PSE-2; COMPND 5 EC: 3.5.2.6; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: BLA, OXA10, PSE2; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BETA LACTAMASE, ANTIBIOTIC RESISTANCE, TAZOBACTAM, DEHYDROALANINE, KEYWDS 2 IRREVERSIBLE INHIBITION, COVALENT MODIFICATION, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR P.A.LANG,J.BREM,C.J.SCHOFIELD REVDAT 4 31-JAN-24 7B3U 1 REMARK REVDAT 3 15-NOV-23 7B3U 1 REMARK LINK ATOM REVDAT 2 11-MAY-22 7B3U 1 JRNL REVDAT 1 12-JAN-22 7B3U 0 JRNL AUTH P.A.LANG,R.RAJ,A.TUMBER,C.T.LOHANS,P.RABE,C.V.ROBINSON, JRNL AUTH 2 J.BREM,C.J.SCHOFIELD JRNL TITL STUDIES ON ENMETAZOBACTAM CLARIFY MECHANISMS OF WIDELY USED JRNL TITL 2 BETA-LACTAMASE INHIBITORS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 119 10119 2022 JRNL REFN ESSN 1091-6490 JRNL PMID 35486701 JRNL DOI 10.1073/PNAS.2117310119 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.2_3472 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 52.87 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 80226 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.156 REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : 0.177 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 4113 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 52.8670 - 4.9092 1.00 2858 143 0.1764 0.2017 REMARK 3 2 4.9092 - 3.8970 1.00 2723 154 0.1180 0.1208 REMARK 3 3 3.8970 - 3.4045 1.00 2674 159 0.1427 0.1536 REMARK 3 4 3.4045 - 3.0933 1.00 2656 154 0.1459 0.1688 REMARK 3 5 3.0933 - 2.8716 1.00 2632 150 0.1529 0.1694 REMARK 3 6 2.8716 - 2.7023 1.00 2636 159 0.1523 0.1831 REMARK 3 7 2.7023 - 2.5669 1.00 2631 160 0.1539 0.1737 REMARK 3 8 2.5669 - 2.4552 1.00 2642 135 0.1536 0.1797 REMARK 3 9 2.4552 - 2.3607 1.00 2668 134 0.1468 0.1818 REMARK 3 10 2.3607 - 2.2792 1.00 2597 154 0.1493 0.1750 REMARK 3 11 2.2792 - 2.2080 1.00 2625 139 0.1467 0.1636 REMARK 3 12 2.2080 - 2.1448 1.00 2621 127 0.1492 0.1833 REMARK 3 13 2.1448 - 2.0884 1.00 2632 154 0.1493 0.1946 REMARK 3 14 2.0884 - 2.0374 1.00 2590 133 0.1495 0.1849 REMARK 3 15 2.0374 - 1.9911 1.00 2680 100 0.1584 0.1739 REMARK 3 16 1.9911 - 1.9487 1.00 2602 130 0.1565 0.1842 REMARK 3 17 1.9487 - 1.9097 1.00 2613 147 0.1597 0.1822 REMARK 3 18 1.9097 - 1.8737 1.00 2597 127 0.1804 0.2057 REMARK 3 19 1.8737 - 1.8402 1.00 2609 154 0.1748 0.1978 REMARK 3 20 1.8402 - 1.8090 1.00 2591 134 0.1828 0.2150 REMARK 3 21 1.8090 - 1.7799 1.00 2637 142 0.1961 0.2306 REMARK 3 22 1.7799 - 1.7525 1.00 2568 129 0.1828 0.2291 REMARK 3 23 1.7525 - 1.7267 1.00 2590 162 0.1823 0.2142 REMARK 3 24 1.7267 - 1.7024 1.00 2596 137 0.1855 0.1944 REMARK 3 25 1.7024 - 1.6794 1.00 2579 141 0.1863 0.2054 REMARK 3 26 1.6794 - 1.6576 1.00 2639 133 0.1838 0.2282 REMARK 3 27 1.6576 - 1.6368 1.00 2574 145 0.2002 0.2530 REMARK 3 28 1.6368 - 1.6171 1.00 2594 148 0.2091 0.2286 REMARK 3 29 1.6171 - 1.5983 0.95 2459 129 0.2347 0.2743 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.930 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 19 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.4851 -3.7353 -16.0984 REMARK 3 T TENSOR REMARK 3 T11: 0.3419 T22: 0.2482 REMARK 3 T33: 0.3607 T12: -0.0371 REMARK 3 T13: -0.0719 T23: -0.1235 REMARK 3 L TENSOR REMARK 3 L11: 3.8504 L22: 3.9295 REMARK 3 L33: 3.8680 L12: -2.8581 REMARK 3 L13: -2.0747 L23: 1.6803 REMARK 3 S TENSOR REMARK 3 S11: -0.1041 S12: 0.5448 S13: -0.7976 REMARK 3 S21: -0.1522 S22: -0.3887 S23: 0.8613 REMARK 3 S31: 0.3881 S32: -0.5653 S33: 0.4578 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 36 THROUGH 55 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.9234 -2.0900 -12.3804 REMARK 3 T TENSOR REMARK 3 T11: 0.1917 T22: 0.1251 REMARK 3 T33: 0.1153 T12: -0.0072 REMARK 3 T13: 0.0108 T23: -0.0389 REMARK 3 L TENSOR REMARK 3 L11: 9.6464 L22: 6.3365 REMARK 3 L33: 7.9854 L12: -4.5596 REMARK 3 L13: 4.9549 L23: -3.1216 REMARK 3 S TENSOR REMARK 3 S11: -0.0387 S12: 0.3033 S13: -0.1693 REMARK 3 S21: -0.0637 S22: -0.0936 S23: 0.0225 REMARK 3 S31: 0.4524 S32: 0.4168 S33: 0.1190 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 56 THROUGH 69 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.7156 10.7745 -11.1299 REMARK 3 T TENSOR REMARK 3 T11: 0.0738 T22: 0.1127 REMARK 3 T33: 0.1141 T12: -0.0057 REMARK 3 T13: -0.0039 T23: 0.0160 REMARK 3 L TENSOR REMARK 3 L11: 1.1300 L22: 8.1876 REMARK 3 L33: 9.0015 L12: 1.6531 REMARK 3 L13: 1.7697 L23: 7.4846 REMARK 3 S TENSOR REMARK 3 S11: -0.1096 S12: 0.1271 S13: -0.0418 REMARK 3 S21: -0.3394 S22: 0.1179 S23: 0.0345 REMARK 3 S31: -0.3323 S32: 0.1472 S33: 0.0104 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 70 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.3867 13.8489 9.9659 REMARK 3 T TENSOR REMARK 3 T11: 0.1202 T22: 0.1012 REMARK 3 T33: 0.1390 T12: 0.0437 REMARK 3 T13: -0.0193 T23: 0.0083 REMARK 3 L TENSOR REMARK 3 L11: 4.8395 L22: 1.3802 REMARK 3 L33: 4.2984 L12: 1.2692 REMARK 3 L13: -3.0681 L23: 0.6704 REMARK 3 S TENSOR REMARK 3 S11: -0.1277 S12: -0.2061 S13: 0.0047 REMARK 3 S21: 0.1326 S22: 0.0196 S23: -0.0552 REMARK 3 S31: 0.0888 S32: 0.3874 S33: 0.1113 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 90 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.8339 17.8443 12.4529 REMARK 3 T TENSOR REMARK 3 T11: 0.0933 T22: 0.1463 REMARK 3 T33: 0.1083 T12: -0.0142 REMARK 3 T13: 0.0149 T23: 0.0381 REMARK 3 L TENSOR REMARK 3 L11: 6.9218 L22: 8.4626 REMARK 3 L33: 5.2715 L12: -6.3811 REMARK 3 L13: 0.5839 L23: 0.5785 REMARK 3 S TENSOR REMARK 3 S11: -0.1979 S12: -0.2029 S13: -0.0542 REMARK 3 S21: 0.0955 S22: 0.2260 S23: 0.2582 REMARK 3 S31: 0.0016 S32: -0.3920 S33: -0.0182 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 117 THROUGH 208 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.9389 11.4833 -0.1946 REMARK 3 T TENSOR REMARK 3 T11: 0.0942 T22: 0.1100 REMARK 3 T33: 0.0987 T12: 0.0163 REMARK 3 T13: -0.0015 T23: 0.0037 REMARK 3 L TENSOR REMARK 3 L11: 1.0334 L22: 1.6725 REMARK 3 L33: 1.4021 L12: 0.1545 REMARK 3 L13: -0.0492 L23: 0.2847 REMARK 3 S TENSOR REMARK 3 S11: -0.0242 S12: 0.0159 S13: -0.0147 REMARK 3 S21: 0.0372 S22: 0.0441 S23: -0.0170 REMARK 3 S31: 0.1171 S32: 0.0755 S33: -0.0177 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 209 THROUGH 264 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.0288 4.2017 -6.5329 REMARK 3 T TENSOR REMARK 3 T11: 0.1264 T22: 0.1169 REMARK 3 T33: 0.1095 T12: -0.0282 REMARK 3 T13: 0.0226 T23: -0.0143 REMARK 3 L TENSOR REMARK 3 L11: 3.9214 L22: 5.6082 REMARK 3 L33: 1.9882 L12: -2.5674 REMARK 3 L13: 0.0713 L23: -0.2400 REMARK 3 S TENSOR REMARK 3 S11: -0.0598 S12: 0.0028 S13: -0.2515 REMARK 3 S21: -0.0235 S22: 0.0403 S23: 0.3856 REMARK 3 S31: 0.2096 S32: -0.1571 S33: -0.0258 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 19 THROUGH 45 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.2051 -5.1396 35.3568 REMARK 3 T TENSOR REMARK 3 T11: 0.1465 T22: 0.2867 REMARK 3 T33: 0.1823 T12: 0.0346 REMARK 3 T13: 0.0338 T23: 0.0297 REMARK 3 L TENSOR REMARK 3 L11: 3.3131 L22: 8.3925 REMARK 3 L33: 2.5551 L12: 3.4351 REMARK 3 L13: 0.8918 L23: 1.3701 REMARK 3 S TENSOR REMARK 3 S11: 0.1708 S12: -0.1433 S13: 0.1403 REMARK 3 S21: 0.3118 S22: -0.1797 S23: 0.5257 REMARK 3 S31: -0.1444 S32: -0.5412 S33: 0.0120 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 46 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.4804 -8.8115 26.2490 REMARK 3 T TENSOR REMARK 3 T11: 0.0996 T22: 0.1364 REMARK 3 T33: 0.1499 T12: -0.0065 REMARK 3 T13: -0.0430 T23: 0.0200 REMARK 3 L TENSOR REMARK 3 L11: 2.1563 L22: 1.7386 REMARK 3 L33: 4.3678 L12: -0.7654 REMARK 3 L13: -2.2681 L23: 0.6675 REMARK 3 S TENSOR REMARK 3 S11: 0.0542 S12: -0.0471 S13: -0.0992 REMARK 3 S21: -0.0885 S22: -0.1296 S23: -0.0915 REMARK 3 S31: -0.0212 S32: 0.0620 S33: 0.0853 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 90 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.0515 -21.1255 10.0844 REMARK 3 T TENSOR REMARK 3 T11: 0.4660 T22: 0.2318 REMARK 3 T33: 0.2898 T12: -0.0082 REMARK 3 T13: 0.0194 T23: -0.0017 REMARK 3 L TENSOR REMARK 3 L11: 5.7954 L22: 5.1581 REMARK 3 L33: 6.2270 L12: -0.8874 REMARK 3 L13: -1.5080 L23: 4.1197 REMARK 3 S TENSOR REMARK 3 S11: -0.0673 S12: 0.1156 S13: -0.6914 REMARK 3 S21: -0.2231 S22: -0.0628 S23: 0.2530 REMARK 3 S31: 0.9136 S32: -0.5717 S33: 0.1070 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 117 THROUGH 196 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.9441 -10.8746 25.0108 REMARK 3 T TENSOR REMARK 3 T11: 0.1042 T22: 0.1208 REMARK 3 T33: 0.1651 T12: 0.0066 REMARK 3 T13: -0.0000 T23: 0.0242 REMARK 3 L TENSOR REMARK 3 L11: 1.6532 L22: 1.8917 REMARK 3 L33: 2.3030 L12: -0.6386 REMARK 3 L13: -0.2072 L23: -0.3053 REMARK 3 S TENSOR REMARK 3 S11: 0.0084 S12: -0.0031 S13: -0.1368 REMARK 3 S21: -0.0564 S22: -0.0225 S23: -0.1819 REMARK 3 S31: 0.1332 S32: 0.1721 S33: 0.0128 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 197 THROUGH 228 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.7967 -10.1707 24.4763 REMARK 3 T TENSOR REMARK 3 T11: 0.0997 T22: 0.1594 REMARK 3 T33: 0.1125 T12: 0.0207 REMARK 3 T13: -0.0028 T23: -0.0099 REMARK 3 L TENSOR REMARK 3 L11: 3.2667 L22: 4.1683 REMARK 3 L33: 3.6336 L12: -0.5815 REMARK 3 L13: 0.4422 L23: 0.2689 REMARK 3 S TENSOR REMARK 3 S11: 0.0357 S12: 0.0774 S13: -0.2376 REMARK 3 S21: -0.1365 S22: -0.1379 S23: 0.1075 REMARK 3 S31: -0.0646 S32: -0.3310 S33: -0.0133 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 229 THROUGH 265 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.8241 -7.8984 26.3640 REMARK 3 T TENSOR REMARK 3 T11: 0.1362 T22: 0.2782 REMARK 3 T33: 0.1606 T12: 0.0043 REMARK 3 T13: -0.0240 T23: 0.0148 REMARK 3 L TENSOR REMARK 3 L11: 3.3480 L22: 5.3307 REMARK 3 L33: 2.5085 L12: 1.3830 REMARK 3 L13: 0.1261 L23: -1.0962 REMARK 3 S TENSOR REMARK 3 S11: -0.0694 S12: 0.1530 S13: -0.0719 REMARK 3 S21: -0.3017 S22: 0.2042 S23: 0.5198 REMARK 3 S31: 0.0453 S32: -0.5492 S33: -0.1108 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7B3U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-DEC-20. REMARK 100 THE DEPOSITION ID IS D_1292112514. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-FEB-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.96856 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 80334 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.598 REMARK 200 RESOLUTION RANGE LOW (A) : 77.020 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.70 REMARK 200 R MERGE (I) : 0.15200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 11.80 REMARK 200 R MERGE FOR SHELL (I) : 1.27500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: 1K55 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM SULFATE, 0.1 M BIS-TRIS REMARK 280 PROPANE PH 6.5, 20% (W/V) PEG 3350, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.46750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.99400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.61100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 62.99400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.46750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.61100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -94.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 265 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 19 N CB CG SD CE REMARK 470 LYS A 30 CE NZ REMARK 470 LYS A 49 CG CD CE NZ REMARK 470 SER A 50 OG REMARK 470 LYS A 84 CE NZ REMARK 470 LYS A 91 CD CE NZ REMARK 470 LYS A 95 NZ REMARK 470 LYS A 134 NZ REMARK 470 LYS A 138 NZ REMARK 470 LYS A 177 CE NZ REMARK 470 GLU A 199 CG CD OE1 OE2 REMARK 470 GLU A 214 CG CD OE1 OE2 REMARK 470 LYS A 228 NZ REMARK 470 GLU A 229 OE1 OE2 REMARK 470 LYS A 246 NZ REMARK 470 LYS A 251 NZ REMARK 470 LYS A 256 CE NZ REMARK 470 LYS B 30 NZ REMARK 470 LYS B 49 CE NZ REMARK 470 LYS B 84 CG CD CE NZ REMARK 470 LYS B 91 CD CE NZ REMARK 470 LYS B 95 CE NZ REMARK 470 MET B 99 CE REMARK 470 LYS B 100 CD CE NZ REMARK 470 GLN B 101 CG CD OE1 NE2 REMARK 470 GLU B 129 CD OE1 OE2 REMARK 470 LYS B 137 CE NZ REMARK 470 LYS B 138 NZ REMARK 470 LYS B 152 NZ REMARK 470 GLU B 156 CD OE1 OE2 REMARK 470 LYS B 177 CE NZ REMARK 470 GLU B 190 CD OE1 OE2 REMARK 470 GLU B 199 CG CD OE1 OE2 REMARK 470 GLU B 214 CG CD OE1 OE2 REMARK 470 GLU B 229 CD OE1 OE2 REMARK 470 LYS B 246 CE NZ REMARK 470 LYS B 251 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C ALA A 66 H2 SWW A 67 0.92 REMARK 500 C ALA B 66 H2 SWW B 67 0.96 REMARK 500 C ALA B 66 H SWW B 67 1.25 REMARK 500 C ALA A 66 H SWW A 67 1.30 REMARK 500 O HOH B 609 O HOH B 621 2.02 REMARK 500 O HOH A 582 O HOH A 634 2.05 REMARK 500 O HOH A 565 O HOH A 626 2.13 REMARK 500 O HOH B 420 O HOH B 583 2.18 REMARK 500 O HOH A 565 O HOH A 634 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 46 -41.23 78.35 REMARK 500 SER A 46 -38.97 78.09 REMARK 500 ALA A 66 -136.71 50.70 REMARK 500 LYS A 152 9.87 -151.13 REMARK 500 GLU A 156 7.28 -151.11 REMARK 500 GLU A 229 -130.71 49.70 REMARK 500 ALA B 66 -136.03 48.55 REMARK 500 GLU B 229 -133.94 52.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 712 DISTANCE = 6.70 ANGSTROMS REMARK 525 HOH B 650 DISTANCE = 6.33 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 304 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 584 O REMARK 620 2 HOH A 646 O 97.8 REMARK 620 N 1 DBREF 7B3U A 20 265 UNP P14489 BLO10_PSEAI 20 265 DBREF 7B3U B 20 265 UNP P14489 BLO10_PSEAI 20 265 SEQADV 7B3U MET A 19 UNP P14489 INITIATING METHIONINE SEQADV 7B3U MET B 19 UNP P14489 INITIATING METHIONINE SEQRES 1 A 247 MET GLY SER ILE THR GLU ASN THR SER TRP ASN LYS GLU SEQRES 2 A 247 PHE SER ALA GLU ALA VAL ASN GLY VAL PHE VAL LEU CYS SEQRES 3 A 247 LYS SER SER SER LYS SER CYS ALA THR ASN ASP LEU ALA SEQRES 4 A 247 ARG ALA SER LYS GLU TYR LEU PRO ALA SWW THR PHE LYS SEQRES 5 A 247 ILE PRO ASN ALA ILE ILE GLY LEU GLU THR GLY VAL ILE SEQRES 6 A 247 LYS ASN GLU HIS GLN VAL PHE LYS TRP ASP GLY LYS PRO SEQRES 7 A 247 ARG ALA MET LYS GLN TRP GLU ARG ASP LEU THR LEU ARG SEQRES 8 A 247 GLY ALA ILE GLN VAL SER ALA VAL PRO VAL PHE GLN GLN SEQRES 9 A 247 ILE ALA ARG GLU VAL GLY GLU VAL ARG MET GLN LYS TYR SEQRES 10 A 247 LEU LYS LYS PHE SER TYR GLY ASN GLN ASN ILE SER GLY SEQRES 11 A 247 GLY ILE ASP LYS PHE TRP LEU GLU GLY GLN LEU ARG ILE SEQRES 12 A 247 SER ALA VAL ASN GLN VAL GLU PHE LEU GLU SER LEU TYR SEQRES 13 A 247 LEU ASN LYS LEU SER ALA SER LYS GLU ASN GLN LEU ILE SEQRES 14 A 247 VAL LYS GLU ALA LEU VAL THR GLU ALA ALA PRO GLU TYR SEQRES 15 A 247 LEU VAL HIS SER LYS THR GLY PHE SER GLY VAL GLY THR SEQRES 16 A 247 GLU SER ASN PRO GLY VAL ALA TRP TRP VAL GLY TRP VAL SEQRES 17 A 247 GLU LYS GLU THR GLU VAL TYR PHE PHE ALA PHE ASN MET SEQRES 18 A 247 ASP ILE ASP ASN GLU SER LYS LEU PRO LEU ARG LYS SER SEQRES 19 A 247 ILE PRO THR LYS ILE MET GLU SER GLU GLY ILE ILE GLY SEQRES 1 B 247 MET GLY SER ILE THR GLU ASN THR SER TRP ASN LYS GLU SEQRES 2 B 247 PHE SER ALA GLU ALA VAL ASN GLY VAL PHE VAL LEU CYS SEQRES 3 B 247 LYS SER SER SER LYS SER CYS ALA THR ASN ASP LEU ALA SEQRES 4 B 247 ARG ALA SER LYS GLU TYR LEU PRO ALA SWW THR PHE LYS SEQRES 5 B 247 ILE PRO ASN ALA ILE ILE GLY LEU GLU THR GLY VAL ILE SEQRES 6 B 247 LYS ASN GLU HIS GLN VAL PHE LYS TRP ASP GLY LYS PRO SEQRES 7 B 247 ARG ALA MET LYS GLN TRP GLU ARG ASP LEU THR LEU ARG SEQRES 8 B 247 GLY ALA ILE GLN VAL SER ALA VAL PRO VAL PHE GLN GLN SEQRES 9 B 247 ILE ALA ARG GLU VAL GLY GLU VAL ARG MET GLN LYS TYR SEQRES 10 B 247 LEU LYS LYS PHE SER TYR GLY ASN GLN ASN ILE SER GLY SEQRES 11 B 247 GLY ILE ASP LYS PHE TRP LEU GLU GLY GLN LEU ARG ILE SEQRES 12 B 247 SER ALA VAL ASN GLN VAL GLU PHE LEU GLU SER LEU TYR SEQRES 13 B 247 LEU ASN LYS LEU SER ALA SER LYS GLU ASN GLN LEU ILE SEQRES 14 B 247 VAL LYS GLU ALA LEU VAL THR GLU ALA ALA PRO GLU TYR SEQRES 15 B 247 LEU VAL HIS SER LYS THR GLY PHE SER GLY VAL GLY THR SEQRES 16 B 247 GLU SER ASN PRO GLY VAL ALA TRP TRP VAL GLY TRP VAL SEQRES 17 B 247 GLU LYS GLU THR GLU VAL TYR PHE PHE ALA PHE ASN MET SEQRES 18 B 247 ASP ILE ASP ASN GLU SER LYS LEU PRO LEU ARG LYS SER SEQRES 19 B 247 ILE PRO THR LYS ILE MET GLU SER GLU GLY ILE ILE GLY MODRES 7B3U SWW A 67 SER MODIFIED RESIDUE MODRES 7B3U SWW B 67 SER MODIFIED RESIDUE HET SWW A 67 19 HET SWW B 67 19 HET SO4 A 301 5 HET SO4 A 302 5 HET PEG A 303 17 HET NA A 304 1 HET NA A 305 1 HET SO4 A 306 5 HET SO4 B 301 5 HET SO4 B 302 5 HET SO4 B 303 5 HETNAM SWW (2~{S})-2-AZANYL-3-(2-HYDROXYETHYLSULFANYL)PROPANOIC HETNAM 2 SWW ACID HETNAM SO4 SULFATE ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM NA SODIUM ION HETSYN SWW S-(2-HYDROXYETHYL)-D-CYSTEINE FORMUL 1 SWW 2(C5 H11 N O3 S) FORMUL 3 SO4 6(O4 S 2-) FORMUL 5 PEG C4 H10 O3 FORMUL 6 NA 2(NA 1+) FORMUL 12 HOH *562(H2 O) HELIX 1 AA1 TRP A 28 ALA A 34 1 7 HELIX 2 AA2 ASP A 55 SER A 60 1 6 HELIX 3 AA3 PRO A 65 THR A 68 5 4 HELIX 4 AA4 PHE A 69 THR A 80 1 12 HELIX 5 AA5 MET A 99 GLU A 103 5 5 HELIX 6 AA6 LEU A 108 VAL A 114 1 7 HELIX 7 AA7 ALA A 116 PHE A 139 1 24 HELIX 8 AA8 LYS A 152 GLY A 157 1 6 HELIX 9 AA9 ALA A 163 LEU A 175 1 13 HELIX 10 AB1 SER A 181 LEU A 192 1 12 HELIX 11 AB2 ASN A 243 LEU A 247 5 5 HELIX 12 AB3 PRO A 248 GLU A 261 1 14 HELIX 13 AB4 TRP B 28 ALA B 34 1 7 HELIX 14 AB5 ASP B 55 LYS B 61 1 7 HELIX 15 AB6 PRO B 65 THR B 68 5 4 HELIX 16 AB7 PHE B 69 THR B 80 1 12 HELIX 17 AB8 MET B 99 GLU B 103 5 5 HELIX 18 AB9 LEU B 108 VAL B 114 1 7 HELIX 19 AC1 ALA B 116 GLY B 128 1 13 HELIX 20 AC2 GLY B 128 PHE B 139 1 12 HELIX 21 AC3 ALA B 163 LEU B 175 1 13 HELIX 22 AC4 SER B 181 LEU B 192 1 12 HELIX 23 AC5 ASN B 243 LEU B 247 5 5 HELIX 24 AC6 PRO B 248 GLU B 261 1 14 SHEET 1 AA1 7 SER A 21 GLU A 24 0 SHEET 2 AA1 7 SER A 50 THR A 53 1 O CYS A 51 N THR A 23 SHEET 3 AA1 7 GLY A 39 LYS A 45 -1 N LEU A 43 O ALA A 52 SHEET 4 AA1 7 GLU A 231 ILE A 241 -1 O PHE A 234 N CYS A 44 SHEET 5 AA1 7 GLY A 218 LYS A 228 -1 N LYS A 228 O GLU A 231 SHEET 6 AA1 7 TYR A 200 PHE A 208 -1 N GLY A 207 O TRP A 221 SHEET 7 AA1 7 VAL A 193 ALA A 196 -1 N GLU A 195 O VAL A 202 SHEET 1 AA2 2 GLU A 62 TYR A 63 0 SHEET 2 AA2 2 ILE A 161 SER A 162 -1 O ILE A 161 N TYR A 63 SHEET 1 AA3 2 VAL A 89 PHE A 90 0 SHEET 2 AA3 2 LEU A 106 THR A 107 -1 O LEU A 106 N PHE A 90 SHEET 1 AA4 7 SER B 21 GLU B 24 0 SHEET 2 AA4 7 SER B 50 THR B 53 1 O CYS B 51 N SER B 21 SHEET 3 AA4 7 GLY B 39 LYS B 45 -1 N LYS B 45 O SER B 50 SHEET 4 AA4 7 GLU B 231 ILE B 241 -1 O PHE B 234 N CYS B 44 SHEET 5 AA4 7 GLY B 218 LYS B 228 -1 N GLY B 224 O PHE B 235 SHEET 6 AA4 7 TYR B 200 PHE B 208 -1 N GLY B 207 O TRP B 221 SHEET 7 AA4 7 VAL B 193 ALA B 196 -1 N GLU B 195 O VAL B 202 SHEET 1 AA5 2 GLU B 62 TYR B 63 0 SHEET 2 AA5 2 ILE B 161 SER B 162 -1 O ILE B 161 N TYR B 63 SHEET 1 AA6 2 VAL B 89 PHE B 90 0 SHEET 2 AA6 2 LEU B 106 THR B 107 -1 O LEU B 106 N PHE B 90 SSBOND 1 CYS A 44 CYS A 51 1555 1555 2.04 SSBOND 2 CYS B 44 CYS B 51 1555 1555 2.04 LINK C ALA A 66 N SWW A 67 1555 1555 1.34 LINK C SWW A 67 N THR A 68 1555 1555 1.33 LINK C ALA B 66 N SWW B 67 1555 1555 1.33 LINK C SWW B 67 N THR B 68 1555 1555 1.33 LINK NA NA A 304 O HOH A 584 1555 1555 2.89 LINK NA NA A 304 O HOH A 646 1555 1555 2.89 LINK NA NA A 305 O HOH A 683 1555 1555 2.90 CRYST1 48.935 97.222 125.988 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020435 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010286 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007937 0.00000