HEADER TRANSFERASE 12-DEC-20 7B8I TITLE TETRAGONAL STRUCTURE OF HUMAN PROTEIN KINASE CK2 CATALYTIC SUBUNIT IN TITLE 2 COMPLEX WITH A HEPARIN OLIGO SACCHARIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CASEIN KINASE II SUBUNIT ALPHA; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CK II ALPHA; COMPND 5 EC: 2.7.11.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CSNK2A1, CK2A1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEIN KINASE CK2, CASEIN KINASE 2, CATALYTIC SUBUNIT CK2ALPHA, KEYWDS 2 HEPARIN, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.NIEFIND,A.SCHNITZLER REVDAT 4 31-JAN-24 7B8I 1 REMARK REVDAT 3 24-FEB-21 7B8I 1 JRNL REVDAT 2 17-FEB-21 7B8I 1 JRNL REVDAT 1 03-FEB-21 7B8I 0 JRNL AUTH A.SCHNITZLER,K.NIEFIND JRNL TITL STRUCTURAL BASIS FOR THE DESIGN OF BISUBSTRATE INHIBITORS OF JRNL TITL 2 PROTEIN KINASE CK2 PROVIDED BY COMPLEX STRUCTURES WITH THE JRNL TITL 3 SUBSTRATE-COMPETITIVE INHIBITOR HEPARIN. JRNL REF EUR.J.MED.CHEM. V. 214 13223 2021 JRNL REFN ISSN 0223-5234 JRNL PMID 33571828 JRNL DOI 10.1016/J.EJMECH.2021.113223 REMARK 2 REMARK 2 RESOLUTION. 2.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.40 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 33889 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1695 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.3970 - 5.8352 0.98 2883 153 0.2063 0.2105 REMARK 3 2 5.8352 - 4.6330 0.99 2771 145 0.1785 0.2364 REMARK 3 3 4.6330 - 4.0478 0.99 2708 143 0.1629 0.1876 REMARK 3 4 4.0478 - 3.6779 0.99 2694 142 0.1770 0.1905 REMARK 3 5 3.6779 - 3.4144 0.99 2693 141 0.2090 0.2532 REMARK 3 6 3.4144 - 3.2131 0.99 2661 141 0.2227 0.2557 REMARK 3 7 3.2131 - 3.0523 0.99 2660 139 0.2353 0.3354 REMARK 3 8 3.0523 - 2.9194 0.98 2635 139 0.2358 0.3207 REMARK 3 9 2.9194 - 2.8070 0.99 2672 141 0.2473 0.2911 REMARK 3 10 2.8070 - 2.7102 0.98 2605 137 0.2477 0.2578 REMARK 3 11 2.7102 - 2.6255 0.98 2641 139 0.2521 0.2881 REMARK 3 12 2.6255 - 2.5504 0.96 2571 135 0.2661 0.2978 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.940 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 48.47 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 5935 REMARK 3 ANGLE : 0.534 8061 REMARK 3 CHIRALITY : 0.044 861 REMARK 3 PLANARITY : 0.004 1011 REMARK 3 DIHEDRAL : 16.856 3543 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 44 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.3088 47.3906 -39.7620 REMARK 3 T TENSOR REMARK 3 T11: 0.4288 T22: 0.3014 REMARK 3 T33: 0.3498 T12: 0.0523 REMARK 3 T13: 0.0201 T23: 0.0240 REMARK 3 L TENSOR REMARK 3 L11: 4.8190 L22: 1.8140 REMARK 3 L33: 2.8637 L12: 0.9877 REMARK 3 L13: -0.2939 L23: -0.0795 REMARK 3 S TENSOR REMARK 3 S11: 0.2249 S12: -0.5355 S13: 0.0491 REMARK 3 S21: 0.3888 S22: -0.1838 S23: -0.0169 REMARK 3 S31: -0.1992 S32: 0.1579 S33: 0.0063 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 45 THROUGH 108 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.3783 50.4163 -48.8058 REMARK 3 T TENSOR REMARK 3 T11: 0.2375 T22: 0.2438 REMARK 3 T33: 0.3090 T12: 0.0145 REMARK 3 T13: -0.0426 T23: 0.0034 REMARK 3 L TENSOR REMARK 3 L11: 7.0822 L22: 3.5926 REMARK 3 L33: 6.3898 L12: 2.0111 REMARK 3 L13: -1.9426 L23: -0.2245 REMARK 3 S TENSOR REMARK 3 S11: 0.0010 S12: 0.0996 S13: 0.3001 REMARK 3 S21: 0.0039 S22: -0.1763 S23: -0.0548 REMARK 3 S31: -0.3577 S32: 0.0139 S33: 0.1198 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 109 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.9923 40.3235 -61.6748 REMARK 3 T TENSOR REMARK 3 T11: 0.6634 T22: 0.7067 REMARK 3 T33: 0.4771 T12: -0.2371 REMARK 3 T13: 0.2725 T23: -0.2568 REMARK 3 L TENSOR REMARK 3 L11: 2.0187 L22: 1.4272 REMARK 3 L33: 3.2818 L12: 1.0887 REMARK 3 L13: 2.3737 L23: 1.9290 REMARK 3 S TENSOR REMARK 3 S11: -0.4053 S12: 0.7868 S13: -0.2412 REMARK 3 S21: -0.4544 S22: 0.3058 S23: -0.1724 REMARK 3 S31: 0.1385 S32: 0.2897 S33: -0.4324 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 130 THROUGH 333 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.8581 38.7012 -56.0229 REMARK 3 T TENSOR REMARK 3 T11: 0.3687 T22: 0.3891 REMARK 3 T33: 0.4214 T12: -0.0578 REMARK 3 T13: 0.0504 T23: 0.0198 REMARK 3 L TENSOR REMARK 3 L11: 2.3307 L22: 2.4720 REMARK 3 L33: 2.3789 L12: 0.5905 REMARK 3 L13: 0.3547 L23: 0.6724 REMARK 3 S TENSOR REMARK 3 S11: -0.0718 S12: 0.2360 S13: 0.0029 REMARK 3 S21: -0.3138 S22: 0.1774 S23: 0.0753 REMARK 3 S31: -0.1282 S32: -0.0640 S33: -0.0976 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 96 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.2892 80.4306 -46.2013 REMARK 3 T TENSOR REMARK 3 T11: 0.4016 T22: 0.3868 REMARK 3 T33: 0.3374 T12: -0.0140 REMARK 3 T13: 0.0779 T23: 0.0047 REMARK 3 L TENSOR REMARK 3 L11: 5.0878 L22: 1.6623 REMARK 3 L33: 3.9796 L12: 1.2390 REMARK 3 L13: 3.3346 L23: 0.8243 REMARK 3 S TENSOR REMARK 3 S11: 0.1591 S12: -0.5229 S13: 0.0094 REMARK 3 S21: 0.2449 S22: -0.1822 S23: 0.1202 REMARK 3 S31: 0.3766 S32: -0.6134 S33: -0.0181 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 97 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.6526 82.9939 -57.0023 REMARK 3 T TENSOR REMARK 3 T11: 0.5153 T22: 0.3866 REMARK 3 T33: 0.4935 T12: -0.1373 REMARK 3 T13: 0.0176 T23: -0.0288 REMARK 3 L TENSOR REMARK 3 L11: 2.9232 L22: 0.9329 REMARK 3 L33: 2.9340 L12: 0.4837 REMARK 3 L13: 0.0619 L23: -1.2008 REMARK 3 S TENSOR REMARK 3 S11: -0.7422 S12: 0.2279 S13: -0.5293 REMARK 3 S21: -0.4597 S22: 0.1639 S23: -0.3897 REMARK 3 S31: 0.5560 S32: -0.6727 S33: 0.5108 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 130 THROUGH 333 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.4903 90.3161 -57.0326 REMARK 3 T TENSOR REMARK 3 T11: 0.3399 T22: 0.3659 REMARK 3 T33: 0.4222 T12: -0.0602 REMARK 3 T13: -0.0176 T23: 0.0029 REMARK 3 L TENSOR REMARK 3 L11: 2.4204 L22: 2.2723 REMARK 3 L33: 2.5843 L12: 0.3261 REMARK 3 L13: -0.1235 L23: -0.2059 REMARK 3 S TENSOR REMARK 3 S11: -0.0314 S12: 0.0556 S13: 0.1147 REMARK 3 S21: -0.1506 S22: 0.1228 S23: -0.0299 REMARK 3 S31: 0.0872 S32: 0.1000 S33: -0.0897 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7B8I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-DEC-20. REMARK 100 THE DEPOSITION ID IS D_1292112944. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33919 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.550 REMARK 200 RESOLUTION RANGE LOW (A) : 45.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.08534 REMARK 200 R SYM (I) : 0.08534 REMARK 200 FOR THE DATA SET : 16.1600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.2 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : 0.72340 REMARK 200 R SYM FOR SHELL (I) : 0.72340 REMARK 200 FOR SHELL : 2.570 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2PVR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PRIOR TO CRYSTALLIZATION, THE ENZYME REMARK 280 WAS INCUBATED WITH HEPARIN DECASACCHARIDE; THE COMPOSITION OF REMARK 280 THIS PREINCUBATION SOLUTION WAS 5 MG/ML CK2ALPHA1-335, 1.4 MM REMARK 280 HEPARIN DECASACCHARIDE, 340 MM NACL, 25 MM TRIS/HCL, PH 8.5. 4 REMARK 280 MICROLITER OF THIS ENZYME/HEPARIN MIXTURE WAS MIXED WITH 1 REMARK 280 MICROLITER RESERVOIR SOLUTION. THE COMPOSITION OF THE RESERVOIR REMARK 280 SOLUTION WAS 32 % (W/V) PEG4000, 0.2 M LITHIUM SULFATE, 0.1 M REMARK 280 TRIS/HCL, PH 7.5. AS A PREPARATION OF X-RAY DIFFRACTION DATA REMARK 280 COLLECTION, THE CRYSTALS WERE TRANSFERRED TO A CRYO SOLUTION REMARK 280 COMPOSED OF 32 % (W/V) PEG4000, 10 % (V/V) GLYCEROL, 0.2 M REMARK 280 LITHIUM SULFATE, 0.5 MM HEPARIN DECASACCHARIDE, 0.1 M TRIS/HCL, REMARK 280 PH 7.5., VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.07700 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 64.20050 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 64.20050 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 93.11550 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 64.20050 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 64.20050 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 31.03850 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 64.20050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 64.20050 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 93.11550 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 64.20050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 64.20050 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 31.03850 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 62.07700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 MET A 334 REMARK 465 GLY A 335 REMARK 465 MET B 1 REMARK 465 MET B 334 REMARK 465 GLY B 335 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 61 15.82 -145.82 REMARK 500 ARG A 107 19.52 58.24 REMARK 500 ASP A 156 40.53 -151.12 REMARK 500 ASP A 175 79.84 54.89 REMARK 500 ALA A 193 167.49 66.21 REMARK 500 MET A 208 54.95 -91.69 REMARK 500 ASP A 210 -156.11 -149.31 REMARK 500 ALA A 332 37.30 -89.18 REMARK 500 ASN B 61 15.37 -145.13 REMARK 500 ARG B 107 19.04 57.79 REMARK 500 ASN B 117 97.78 -62.75 REMARK 500 ASN B 118 99.81 -67.58 REMARK 500 ASP B 156 40.63 -150.99 REMARK 500 ASP B 175 80.39 54.59 REMARK 500 ALA B 193 166.85 66.65 REMARK 500 MET B 208 54.77 -92.19 REMARK 500 ASP B 210 -156.24 -149.10 REMARK 500 ALA B 332 35.46 -89.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Poly-Saccharide residues IDS B REMARK 800 401 through SGN B 408 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7B8H RELATED DB: PDB REMARK 900 7B8H CONTAINS A CK2ALPHA/HEPARIN COMPLEX IN A DIFFERENT CRYSTAL REMARK 900 PACKING. DBREF 7B8I A 1 335 UNP P68400 CSK21_HUMAN 1 335 DBREF 7B8I B 1 335 UNP P68400 CSK21_HUMAN 1 335 SEQRES 1 A 335 MET SER GLY PRO VAL PRO SER ARG ALA ARG VAL TYR THR SEQRES 2 A 335 ASP VAL ASN THR HIS ARG PRO ARG GLU TYR TRP ASP TYR SEQRES 3 A 335 GLU SER HIS VAL VAL GLU TRP GLY ASN GLN ASP ASP TYR SEQRES 4 A 335 GLN LEU VAL ARG LYS LEU GLY ARG GLY LYS TYR SER GLU SEQRES 5 A 335 VAL PHE GLU ALA ILE ASN ILE THR ASN ASN GLU LYS VAL SEQRES 6 A 335 VAL VAL LYS ILE LEU LYS PRO VAL LYS LYS LYS LYS ILE SEQRES 7 A 335 LYS ARG GLU ILE LYS ILE LEU GLU ASN LEU ARG GLY GLY SEQRES 8 A 335 PRO ASN ILE ILE THR LEU ALA ASP ILE VAL LYS ASP PRO SEQRES 9 A 335 VAL SER ARG THR PRO ALA LEU VAL PHE GLU HIS VAL ASN SEQRES 10 A 335 ASN THR ASP PHE LYS GLN LEU TYR GLN THR LEU THR ASP SEQRES 11 A 335 TYR ASP ILE ARG PHE TYR MET TYR GLU ILE LEU LYS ALA SEQRES 12 A 335 LEU ASP TYR CYS HIS SER MET GLY ILE MET HIS ARG ASP SEQRES 13 A 335 VAL LYS PRO HIS ASN VAL MET ILE ASP HIS GLU HIS ARG SEQRES 14 A 335 LYS LEU ARG LEU ILE ASP TRP GLY LEU ALA GLU PHE TYR SEQRES 15 A 335 HIS PRO GLY GLN GLU TYR ASN VAL ARG VAL ALA SER ARG SEQRES 16 A 335 TYR PHE LYS GLY PRO GLU LEU LEU VAL ASP TYR GLN MET SEQRES 17 A 335 TYR ASP TYR SER LEU ASP MET TRP SER LEU GLY CYS MET SEQRES 18 A 335 LEU ALA SER MET ILE PHE ARG LYS GLU PRO PHE PHE HIS SEQRES 19 A 335 GLY HIS ASP ASN TYR ASP GLN LEU VAL ARG ILE ALA LYS SEQRES 20 A 335 VAL LEU GLY THR GLU ASP LEU TYR ASP TYR ILE ASP LYS SEQRES 21 A 335 TYR ASN ILE GLU LEU ASP PRO ARG PHE ASN ASP ILE LEU SEQRES 22 A 335 GLY ARG HIS SER ARG LYS ARG TRP GLU ARG PHE VAL HIS SEQRES 23 A 335 SER GLU ASN GLN HIS LEU VAL SER PRO GLU ALA LEU ASP SEQRES 24 A 335 PHE LEU ASP LYS LEU LEU ARG TYR ASP HIS GLN SER ARG SEQRES 25 A 335 LEU THR ALA ARG GLU ALA MET GLU HIS PRO TYR PHE TYR SEQRES 26 A 335 THR VAL VAL LYS ASP GLN ALA ARG MET GLY SEQRES 1 B 335 MET SER GLY PRO VAL PRO SER ARG ALA ARG VAL TYR THR SEQRES 2 B 335 ASP VAL ASN THR HIS ARG PRO ARG GLU TYR TRP ASP TYR SEQRES 3 B 335 GLU SER HIS VAL VAL GLU TRP GLY ASN GLN ASP ASP TYR SEQRES 4 B 335 GLN LEU VAL ARG LYS LEU GLY ARG GLY LYS TYR SER GLU SEQRES 5 B 335 VAL PHE GLU ALA ILE ASN ILE THR ASN ASN GLU LYS VAL SEQRES 6 B 335 VAL VAL LYS ILE LEU LYS PRO VAL LYS LYS LYS LYS ILE SEQRES 7 B 335 LYS ARG GLU ILE LYS ILE LEU GLU ASN LEU ARG GLY GLY SEQRES 8 B 335 PRO ASN ILE ILE THR LEU ALA ASP ILE VAL LYS ASP PRO SEQRES 9 B 335 VAL SER ARG THR PRO ALA LEU VAL PHE GLU HIS VAL ASN SEQRES 10 B 335 ASN THR ASP PHE LYS GLN LEU TYR GLN THR LEU THR ASP SEQRES 11 B 335 TYR ASP ILE ARG PHE TYR MET TYR GLU ILE LEU LYS ALA SEQRES 12 B 335 LEU ASP TYR CYS HIS SER MET GLY ILE MET HIS ARG ASP SEQRES 13 B 335 VAL LYS PRO HIS ASN VAL MET ILE ASP HIS GLU HIS ARG SEQRES 14 B 335 LYS LEU ARG LEU ILE ASP TRP GLY LEU ALA GLU PHE TYR SEQRES 15 B 335 HIS PRO GLY GLN GLU TYR ASN VAL ARG VAL ALA SER ARG SEQRES 16 B 335 TYR PHE LYS GLY PRO GLU LEU LEU VAL ASP TYR GLN MET SEQRES 17 B 335 TYR ASP TYR SER LEU ASP MET TRP SER LEU GLY CYS MET SEQRES 18 B 335 LEU ALA SER MET ILE PHE ARG LYS GLU PRO PHE PHE HIS SEQRES 19 B 335 GLY HIS ASP ASN TYR ASP GLN LEU VAL ARG ILE ALA LYS SEQRES 20 B 335 VAL LEU GLY THR GLU ASP LEU TYR ASP TYR ILE ASP LYS SEQRES 21 B 335 TYR ASN ILE GLU LEU ASP PRO ARG PHE ASN ASP ILE LEU SEQRES 22 B 335 GLY ARG HIS SER ARG LYS ARG TRP GLU ARG PHE VAL HIS SEQRES 23 B 335 SER GLU ASN GLN HIS LEU VAL SER PRO GLU ALA LEU ASP SEQRES 24 B 335 PHE LEU ASP LYS LEU LEU ARG TYR ASP HIS GLN SER ARG SEQRES 25 B 335 LEU THR ALA ARG GLU ALA MET GLU HIS PRO TYR PHE TYR SEQRES 26 B 335 THR VAL VAL LYS ASP GLN ALA ARG MET GLY HET IDS C 1 17 HET SGN C 2 19 HET IDS C 3 16 HET SGN C 4 19 HET IDS C 5 16 HET SGN C 6 19 HET IDS C 7 16 HET SGN C 8 19 HET GOL A 401 6 HET SO4 A 402 5 HET SO4 A 403 5 HET SO4 B 401 5 HETNAM IDS 2-O-SULFO-ALPHA-L-IDOPYRANURONIC ACID HETNAM SGN 2-DEOXY-6-O-SULFO-2-(SULFOAMINO)-ALPHA-D-GLUCOPYRANOSE HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETSYN IDS O2-SULFO-GLUCURONIC ACID; 2-O-SULFO-ALPHA-L-IDURONIC HETSYN 2 IDS ACID; 2-O-SULFO-L-IDURONIC ACID; 2-O-SULFO-IDURONIC HETSYN 3 IDS ACID HETSYN SGN N,O6-DISULFO-GLUCOSAMINE; 6-O-SULFO-N-SULFO-ALPHA-D- HETSYN 2 SGN GLUCOSAMINE; 2-DEOXY-6-O-SULFO-2-(SULFOAMINO)-ALPHA-D- HETSYN 3 SGN GLUCOSE; 2-DEOXY-6-O-SULFO-2-(SULFOAMINO)-D-GLUCOSE; HETSYN 4 SGN 2-DEOXY-6-O-SULFO-2-(SULFOAMINO)-GLUCOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 IDS 4(C6 H10 O10 S) FORMUL 3 SGN 4(C6 H13 N O11 S2) FORMUL 4 GOL C3 H8 O3 FORMUL 5 SO4 3(O4 S 2-) FORMUL 8 HOH *143(H2 O) HELIX 1 AA1 ASP A 14 ARG A 19 1 6 HELIX 2 AA2 PRO A 20 ASP A 25 1 6 HELIX 3 AA3 TYR A 26 HIS A 29 5 4 HELIX 4 AA4 LYS A 74 ARG A 89 1 16 HELIX 5 AA5 ASP A 120 GLN A 126 1 7 HELIX 6 AA6 THR A 129 MET A 150 1 22 HELIX 7 AA7 LYS A 158 HIS A 160 5 3 HELIX 8 AA8 SER A 194 LYS A 198 5 5 HELIX 9 AA9 GLY A 199 VAL A 204 1 6 HELIX 10 AB1 TYR A 211 PHE A 227 1 17 HELIX 11 AB2 ASP A 237 GLY A 250 1 14 HELIX 12 AB3 GLY A 250 TYR A 261 1 12 HELIX 13 AB4 ARG A 280 VAL A 285 5 6 HELIX 14 AB5 ASN A 289 VAL A 293 5 5 HELIX 15 AB6 SER A 294 LEU A 305 1 12 HELIX 16 AB7 ASP A 308 ARG A 312 5 5 HELIX 17 AB8 THR A 314 GLU A 320 1 7 HELIX 18 AB9 HIS A 321 TYR A 323 5 3 HELIX 19 AC1 PHE A 324 ALA A 332 1 9 HELIX 20 AC2 ASP B 14 ARG B 19 1 6 HELIX 21 AC3 PRO B 20 ASP B 25 1 6 HELIX 22 AC4 TYR B 26 HIS B 29 5 4 HELIX 23 AC5 LYS B 74 ARG B 89 1 16 HELIX 24 AC6 ASP B 120 TYR B 125 1 6 HELIX 25 AC7 GLN B 126 LEU B 128 5 3 HELIX 26 AC8 THR B 129 MET B 150 1 22 HELIX 27 AC9 LYS B 158 HIS B 160 5 3 HELIX 28 AD1 SER B 194 LYS B 198 5 5 HELIX 29 AD2 GLY B 199 VAL B 204 1 6 HELIX 30 AD3 TYR B 211 PHE B 227 1 17 HELIX 31 AD4 ASP B 237 GLY B 250 1 14 HELIX 32 AD5 GLY B 250 ASN B 262 1 13 HELIX 33 AD6 ARG B 280 VAL B 285 5 6 HELIX 34 AD7 ASN B 289 VAL B 293 5 5 HELIX 35 AD8 SER B 294 LEU B 305 1 12 HELIX 36 AD9 ASP B 308 ARG B 312 5 5 HELIX 37 AE1 THR B 314 GLU B 320 1 7 HELIX 38 AE2 HIS B 321 TYR B 323 5 3 HELIX 39 AE3 PHE B 324 ALA B 332 1 9 SHEET 1 AA1 6 GLY A 34 ASN A 35 0 SHEET 2 AA1 6 LEU A 97 LYS A 102 1 O LYS A 102 N GLY A 34 SHEET 3 AA1 6 PRO A 109 GLU A 114 -1 O VAL A 112 N ASP A 99 SHEET 4 AA1 6 LYS A 64 LEU A 70 -1 N LYS A 68 O LEU A 111 SHEET 5 AA1 6 SER A 51 ASN A 58 -1 N ALA A 56 O VAL A 65 SHEET 6 AA1 6 TYR A 39 ARG A 47 -1 N GLY A 46 O VAL A 53 SHEET 1 AA2 2 ILE A 152 MET A 153 0 SHEET 2 AA2 2 GLU A 180 PHE A 181 -1 O GLU A 180 N MET A 153 SHEET 1 AA3 2 VAL A 162 ASP A 165 0 SHEET 2 AA3 2 LYS A 170 LEU A 173 -1 O ARG A 172 N MET A 163 SHEET 1 AA4 6 GLY B 34 ASN B 35 0 SHEET 2 AA4 6 LEU B 97 LYS B 102 1 O ILE B 100 N GLY B 34 SHEET 3 AA4 6 PRO B 109 GLU B 114 -1 O VAL B 112 N ASP B 99 SHEET 4 AA4 6 LYS B 64 LEU B 70 -1 N LYS B 68 O LEU B 111 SHEET 5 AA4 6 SER B 51 ASN B 58 -1 N ALA B 56 O VAL B 65 SHEET 6 AA4 6 TYR B 39 ARG B 47 -1 N GLY B 46 O VAL B 53 SHEET 1 AA5 2 ILE B 152 MET B 153 0 SHEET 2 AA5 2 GLU B 180 PHE B 181 -1 O GLU B 180 N MET B 153 SHEET 1 AA6 2 VAL B 162 ASP B 165 0 SHEET 2 AA6 2 LYS B 170 LEU B 173 -1 O ARG B 172 N MET B 163 LINK O4 IDS C 1 C1 SGN C 2 1555 1555 1.45 LINK O4 SGN C 2 C1 IDS C 3 1555 1555 1.44 LINK O4 IDS C 3 C1 SGN C 4 1555 1555 1.44 LINK O4 SGN C 4 C1 IDS C 5 1555 1555 1.44 LINK O4 IDS C 5 C1 SGN C 6 1555 1555 1.45 LINK O4 SGN C 6 C1 IDS C 7 1555 1555 1.44 LINK O4 IDS C 7 C1 SGN C 8 1555 1555 1.49 CISPEP 1 GLU A 230 PRO A 231 0 -4.37 CISPEP 2 GLU B 230 PRO B 231 0 -4.65 SITE 1 AC1 5 PRO A 92 LYS A 142 ASP A 145 TYR A 146 SITE 2 AC1 5 HOH A 503 SITE 1 AC2 4 ARG A 80 ARG A 155 ASN A 189 HOH A 505 SITE 1 AC3 3 ARG A 191 LYS A 198 ASN A 238 SITE 1 AC4 5 LYS B 77 ARG B 80 ARG B 155 ASN B 189 SITE 2 AC4 5 HOH B 538 SITE 1 AC5 23 TRP A 33 ARG A 47 LYS A 74 LYS A 75 SITE 2 AC5 23 LYS A 79 LYS A 102 ARG A 107 HIS B 29 SITE 3 AC5 23 LEU B 45 GLY B 46 ARG B 47 GLY B 48 SITE 4 AC5 23 LYS B 49 LYS B 74 LYS B 75 LYS B 76 SITE 5 AC5 23 LYS B 79 LYS B 102 ARG B 107 LYS B 122 SITE 6 AC5 23 LYS B 158 HIS B 160 HOH B 569 CRYST1 128.401 128.401 124.154 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007788 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007788 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008055 0.00000