HEADER TRANSFERASE 16-DEC-20 7BB0 TITLE CRYSTAL STRUCTURE OF THE CAMP-DEPENDENT PROTEIN KINASE A TITLE 2 COCRYSTALLIZED WITH NAT22-366511 AND PKI (5-24) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAMP-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT ALPHA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PKA C-ALPHA; COMPND 5 EC: 2.7.11.11; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: CAMP-DEPENDENT PROTEIN KINASE INHIBITOR ALPHA; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: PKI-ALPHA,CAMP-DEPENDENT PROTEIN KINASE INHIBITOR, COMPND 11 MUSCLE/BRAIN ISOFORM; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRICETULUS GRISEUS; SOURCE 3 ORGANISM_COMMON: CHINESE HAMSTER; SOURCE 4 ORGANISM_TAXID: 10029; SOURCE 5 GENE: PRKACA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 11 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 12 ORGANISM_TAXID: 10090 KEYWDS PHOSPHOTRANSFERASE, SIGNALLING PATHWAYS, GLYCOGEN METABOLISM, KEYWDS 2 SERINE/THREONINE KINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.OEBBEKE,J.MUELLER,S.GLINCA,A.HEINE,G.KLEBE REVDAT 2 31-JAN-24 7BB0 1 REMARK REVDAT 1 12-JAN-22 7BB0 0 JRNL AUTH M.OEBBEKE,J.MUELLER,A.HEINE,G.KLEBE JRNL TITL CRYSTAL STRUCTURE OF THE CAMP-DEPENDENT PROTEIN KINASE A JRNL TITL 2 COCRYSTALLIZED WITH NAT22-366511 AND PKI (5-24) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.34 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 48018 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2401 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.3400 - 4.4900 0.94 2779 147 0.1869 0.2328 REMARK 3 2 4.4900 - 3.5600 0.96 2744 144 0.1704 0.1891 REMARK 3 3 3.5600 - 3.1100 0.96 2670 141 0.2137 0.2498 REMARK 3 4 3.1100 - 2.8300 0.97 2694 141 0.2127 0.2548 REMARK 3 5 2.8300 - 2.6200 0.98 2717 143 0.2196 0.2345 REMARK 3 6 2.6200 - 2.4700 0.98 2703 143 0.2066 0.2112 REMARK 3 7 2.4700 - 2.3500 0.98 2682 141 0.2025 0.2531 REMARK 3 8 2.3500 - 2.2400 0.98 2694 142 0.2007 0.2415 REMARK 3 9 2.2400 - 2.1600 0.98 2712 142 0.2036 0.2347 REMARK 3 10 2.1600 - 2.0800 0.98 2665 141 0.2080 0.2736 REMARK 3 11 2.0800 - 2.0200 0.98 2675 141 0.2120 0.2345 REMARK 3 12 2.0200 - 1.9600 0.98 2691 141 0.2134 0.2536 REMARK 3 13 1.9600 - 1.9100 0.98 2685 142 0.2222 0.2642 REMARK 3 14 1.9100 - 1.8600 0.98 2691 141 0.2248 0.2306 REMARK 3 15 1.8600 - 1.8200 0.98 2655 140 0.2321 0.2717 REMARK 3 16 1.8200 - 1.7800 0.98 2673 141 0.2673 0.3188 REMARK 3 17 1.7800 - 1.7500 0.91 2487 130 0.3043 0.3338 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.229 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.742 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.43 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.38 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2971 REMARK 3 ANGLE : 0.830 4044 REMARK 3 CHIRALITY : 0.053 431 REMARK 3 PLANARITY : 0.005 542 REMARK 3 DIHEDRAL : 18.754 1053 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -2 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.6072 -9.0362 -1.1161 REMARK 3 T TENSOR REMARK 3 T11: 0.3493 T22: 0.4637 REMARK 3 T33: 0.4261 T12: -0.1001 REMARK 3 T13: -0.0981 T23: -0.0478 REMARK 3 L TENSOR REMARK 3 L11: 1.4236 L22: 2.9565 REMARK 3 L33: 3.4449 L12: -0.2539 REMARK 3 L13: -0.9421 L23: -0.4028 REMARK 3 S TENSOR REMARK 3 S11: 0.0231 S12: -0.0254 S13: 0.2961 REMARK 3 S21: 0.2650 S22: 0.2530 S23: 0.0130 REMARK 3 S31: -0.3587 S32: -0.3843 S33: -0.3032 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 32 THROUGH 54 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.5052 -19.8761 -30.5117 REMARK 3 T TENSOR REMARK 3 T11: 0.3962 T22: 0.6107 REMARK 3 T33: 0.8509 T12: 0.0334 REMARK 3 T13: 0.1274 T23: -0.0872 REMARK 3 L TENSOR REMARK 3 L11: 0.7944 L22: 6.8151 REMARK 3 L33: 2.0740 L12: -0.4888 REMARK 3 L13: 0.0675 L23: 1.3119 REMARK 3 S TENSOR REMARK 3 S11: 0.4545 S12: 0.3849 S13: 1.0176 REMARK 3 S21: -0.7011 S22: -0.3999 S23: -0.2205 REMARK 3 S31: -0.3811 S32: 0.1052 S33: -0.0353 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 55 THROUGH 82 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.1001 -21.8406 -31.0823 REMARK 3 T TENSOR REMARK 3 T11: 0.3194 T22: 0.4699 REMARK 3 T33: 0.3448 T12: 0.0782 REMARK 3 T13: 0.1193 T23: -0.0577 REMARK 3 L TENSOR REMARK 3 L11: 6.7471 L22: 6.1247 REMARK 3 L33: 5.3893 L12: 0.1384 REMARK 3 L13: 0.5775 L23: 0.8853 REMARK 3 S TENSOR REMARK 3 S11: 0.4461 S12: 0.3845 S13: -0.4555 REMARK 3 S21: -0.2866 S22: 0.0096 S23: -0.2731 REMARK 3 S31: -0.3992 S32: 0.3397 S33: -0.3846 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 83 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.9245 -12.6476 -24.7182 REMARK 3 T TENSOR REMARK 3 T11: 0.3165 T22: 0.3123 REMARK 3 T33: 0.4393 T12: 0.0375 REMARK 3 T13: 0.1356 T23: 0.0181 REMARK 3 L TENSOR REMARK 3 L11: 3.1784 L22: 1.9411 REMARK 3 L33: 2.9014 L12: -0.6038 REMARK 3 L13: -2.9275 L23: 1.1758 REMARK 3 S TENSOR REMARK 3 S11: 0.1648 S12: 0.1922 S13: 0.1376 REMARK 3 S21: -0.8016 S22: -0.2020 S23: -0.8447 REMARK 3 S31: -0.0994 S32: 0.2268 S33: 0.0647 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 115 THROUGH 179 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.2689 -23.0198 -18.3951 REMARK 3 T TENSOR REMARK 3 T11: 0.1878 T22: 0.1752 REMARK 3 T33: 0.1854 T12: 0.0378 REMARK 3 T13: 0.0100 T23: 0.0213 REMARK 3 L TENSOR REMARK 3 L11: 1.3004 L22: 2.5098 REMARK 3 L33: 2.3735 L12: -0.1211 REMARK 3 L13: 0.2420 L23: 0.1228 REMARK 3 S TENSOR REMARK 3 S11: 0.0424 S12: 0.0340 S13: -0.1173 REMARK 3 S21: -0.0889 S22: -0.0602 S23: -0.2441 REMARK 3 S31: 0.2029 S32: 0.1618 S33: 0.0455 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 180 THROUGH 297 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.6273 -15.6208 -18.2706 REMARK 3 T TENSOR REMARK 3 T11: 0.1782 T22: 0.1812 REMARK 3 T33: 0.2166 T12: 0.0159 REMARK 3 T13: -0.0071 T23: -0.0279 REMARK 3 L TENSOR REMARK 3 L11: 1.9115 L22: 3.2266 REMARK 3 L33: 2.3381 L12: 0.4589 REMARK 3 L13: 0.0943 L23: 0.2065 REMARK 3 S TENSOR REMARK 3 S11: -0.0356 S12: -0.0509 S13: 0.1645 REMARK 3 S21: -0.0738 S22: -0.0951 S23: 0.3535 REMARK 3 S31: -0.1431 S32: -0.1983 S33: 0.1281 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 298 THROUGH 350 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.9539 -24.5365 -21.3064 REMARK 3 T TENSOR REMARK 3 T11: 0.2232 T22: 0.3324 REMARK 3 T33: 0.3831 T12: 0.0331 REMARK 3 T13: -0.0208 T23: 0.0444 REMARK 3 L TENSOR REMARK 3 L11: 2.3922 L22: 2.3772 REMARK 3 L33: 1.1686 L12: -0.9799 REMARK 3 L13: -0.9204 L23: 1.0893 REMARK 3 S TENSOR REMARK 3 S11: 0.1672 S12: 0.2416 S13: 0.0952 REMARK 3 S21: -0.0774 S22: 0.0072 S23: -0.3909 REMARK 3 S31: 0.0111 S32: 0.0924 S33: 0.1163 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 5 THROUGH 12 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.2837 -33.3824 -27.5071 REMARK 3 T TENSOR REMARK 3 T11: 0.4200 T22: 0.3214 REMARK 3 T33: 0.3379 T12: -0.0933 REMARK 3 T13: 0.0069 T23: -0.0835 REMARK 3 L TENSOR REMARK 3 L11: 9.7439 L22: 2.0114 REMARK 3 L33: 2.0494 L12: -0.3250 REMARK 3 L13: -1.8204 L23: -0.7904 REMARK 3 S TENSOR REMARK 3 S11: 0.1245 S12: -0.4522 S13: 0.2367 REMARK 3 S21: 0.6879 S22: -0.0857 S23: 0.4092 REMARK 3 S31: 0.6337 S32: -0.7957 S33: -0.0913 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 13 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.6200 -24.9449 -31.8007 REMARK 3 T TENSOR REMARK 3 T11: 0.4318 T22: 0.2358 REMARK 3 T33: 0.2544 T12: 0.0406 REMARK 3 T13: -0.0041 T23: -0.0290 REMARK 3 L TENSOR REMARK 3 L11: 2.3805 L22: 5.8837 REMARK 3 L33: 5.4488 L12: 0.4222 REMARK 3 L13: 1.1770 L23: 0.8426 REMARK 3 S TENSOR REMARK 3 S11: 0.1305 S12: 0.4694 S13: 0.3952 REMARK 3 S21: -0.8050 S22: -0.2565 S23: 0.1382 REMARK 3 S31: 0.2170 S32: -0.1102 S33: 0.0558 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7BB0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-DEC-20. REMARK 100 THE DEPOSITION ID IS D_1292113064. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-NOV-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48020 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 44.240 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04500 REMARK 200 FOR THE DATA SET : 15.5500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.50000 REMARK 200 FOR SHELL : 2.420 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6Y8C REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 MM PKA IN 30 MM MES-BIS-TRIS REMARK 280 -BUFFER, 1 MM DITHIOTHREITOL, 0.1 MM SODIUM EDTA, 75 MM LICL, REMARK 280 0.2 MM MEGA 8, 0.5 MM PKI AND 18-23 % METHANOL (V/V) 0.003 ML REMARK 280 DROP VOLUME, 0.5 ML RESERVOIR VOLUME, PH 7.0, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.38200 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.44250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.69450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.44250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.38200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.69450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE A 339 REMARK 465 ASN A 340 REMARK 465 GLU A 341 REMARK 465 LYS A 342 REMARK 465 HIS B 23 REMARK 465 ASP B 24 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 7 NZ REMARK 470 LYS A 8 CG CD CE NZ REMARK 470 LYS A 16 CG CD CE NZ REMARK 470 LYS A 21 CD CE NZ REMARK 470 GLU A 24 CG CD OE1 OE2 REMARK 470 LYS A 28 CD CE NZ REMARK 470 LYS A 29 CE NZ REMARK 470 GLU A 31 OE1 OE2 REMARK 470 ARG A 45 CZ NH1 NH2 REMARK 470 LYS A 47 CG CD CE NZ REMARK 470 THR A 51 OG1 CG2 REMARK 470 SER A 53 OG REMARK 470 PHE A 54 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG A 56 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 57 CG2 REMARK 470 LYS A 61 CE NZ REMARK 470 LYS A 72 CG CD CE NZ REMARK 470 ASP A 75 CG OD1 OD2 REMARK 470 LYS A 76 NZ REMARK 470 GLN A 77 CG CD OE1 NE2 REMARK 470 LYS A 78 CG CD CE NZ REMARK 470 VAL A 80 CG1 CG2 REMARK 470 LYS A 81 CG CD CE NZ REMARK 470 LEU A 82 CD1 CD2 REMARK 470 LYS A 83 CG CD CE NZ REMARK 470 LEU A 89 CD2 REMARK 470 LYS A 111 CE NZ REMARK 470 ASN A 113 CG OD1 ND2 REMARK 470 ILE A 135 CD1 REMARK 470 ARG A 137 CZ NH1 NH2 REMARK 470 GLN A 176 CG CD OE1 NE2 REMARK 470 VAL A 191 CG1 CG2 REMARK 470 LYS A 192 CD CE NZ REMARK 470 LYS A 213 CE NZ REMARK 470 LYS A 217 NZ REMARK 470 ILE A 244 CG1 CD1 REMARK 470 GLN A 245 OE1 NE2 REMARK 470 LYS A 254 CE NZ REMARK 470 ARG A 256 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 279 CE NZ REMARK 470 LYS A 285 CG CD CE NZ REMARK 470 ILE A 303 CD1 REMARK 470 GLU A 311 CD OE1 OE2 REMARK 470 LYS A 317 CG CD CE NZ REMARK 470 PHE A 318 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 319 CG CD CE NZ REMARK 470 ASP A 323 CG OD1 OD2 REMARK 470 THR A 324 OG1 CG2 REMARK 470 ASP A 329 CG OD1 OD2 REMARK 470 GLU A 331 CG CD OE1 OE2 REMARK 470 GLU A 333 CG CD OE1 OE2 REMARK 470 GLU A 334 CG CD OE1 OE2 REMARK 470 ILE A 335 CD1 REMARK 470 ARG A 336 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 337 CG1 CG2 REMARK 470 LYS A 345 CG CD CE NZ REMARK 470 GLU A 346 CG CD OE1 OE2 REMARK 470 ILE B 22 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 112 -149.06 -117.58 REMARK 500 ASP A 166 47.51 -143.11 REMARK 500 ASP A 184 107.01 84.07 REMARK 500 LEU A 273 47.85 -85.33 REMARK 500 LYS A 319 40.13 -80.63 REMARK 500 VAL A 337 -157.48 -108.15 REMARK 500 GLU A 346 -27.74 78.90 REMARK 500 REMARK 500 REMARK: NULL DBREF 7BB0 A 0 350 UNP P25321 KAPCA_CRIGR 1 351 DBREF 7BB0 B 5 24 UNP P63248 IPKA_MOUSE 6 25 SEQADV 7BB0 GLY A -2 UNP P25321 EXPRESSION TAG SEQADV 7BB0 HIS A -1 UNP P25321 EXPRESSION TAG SEQRES 1 A 353 GLY HIS MET GLY ASN ALA ALA ALA ALA LYS LYS GLY SEP SEQRES 2 A 353 GLU GLN GLU SER VAL LYS GLU PHE LEU ALA LYS ALA LYS SEQRES 3 A 353 GLU GLU PHE LEU LYS LYS TRP GLU SER PRO SER GLN ASN SEQRES 4 A 353 THR ALA GLN LEU ASP HIS PHE ASP ARG ILE LYS THR LEU SEQRES 5 A 353 GLY THR GLY SER PHE GLY ARG VAL MET LEU VAL LYS HIS SEQRES 6 A 353 LYS GLU THR GLY ASN HIS TYR ALA MET LYS ILE LEU ASP SEQRES 7 A 353 LYS GLN LYS VAL VAL LYS LEU LYS GLN ILE GLU HIS THR SEQRES 8 A 353 LEU ASN GLU LYS ARG ILE LEU GLN ALA VAL ASN PHE PRO SEQRES 9 A 353 PHE LEU VAL LYS LEU GLU PHE SER PHE LYS ASP ASN SER SEQRES 10 A 353 ASN LEU TYR MET VAL MET GLU TYR VAL PRO GLY GLY GLU SEQRES 11 A 353 MET PHE SER HIS LEU ARG ARG ILE GLY ARG PHE SER GLU SEQRES 12 A 353 PRO HIS ALA ARG PHE TYR ALA ALA GLN ILE VAL LEU THR SEQRES 13 A 353 PHE GLU TYR LEU HIS SER LEU ASP LEU ILE TYR ARG ASP SEQRES 14 A 353 LEU LYS PRO GLU ASN LEU LEU ILE ASP GLN GLN GLY TYR SEQRES 15 A 353 ILE GLN VAL THR ASP PHE GLY PHE ALA LYS ARG VAL LYS SEQRES 16 A 353 GLY ARG THR TRP TPO LEU CYS GLY THR PRO GLU TYR LEU SEQRES 17 A 353 ALA PRO GLU ILE ILE LEU SER LYS GLY TYR ASN LYS ALA SEQRES 18 A 353 VAL ASP TRP TRP ALA LEU GLY VAL LEU ILE TYR GLU MET SEQRES 19 A 353 ALA ALA GLY TYR PRO PRO PHE PHE ALA ASP GLN PRO ILE SEQRES 20 A 353 GLN ILE TYR GLU LYS ILE VAL SER GLY LYS VAL ARG PHE SEQRES 21 A 353 PRO SER HIS PHE SER SER ASP LEU LYS ASP LEU LEU ARG SEQRES 22 A 353 ASN LEU LEU GLN VAL ASP LEU THR LYS ARG PHE GLY ASN SEQRES 23 A 353 LEU LYS ASN GLY VAL ASN ASP ILE LYS ASN HIS LYS TRP SEQRES 24 A 353 PHE ALA THR THR ASP TRP ILE ALA ILE TYR GLN ARG LYS SEQRES 25 A 353 VAL GLU ALA PRO PHE ILE PRO LYS PHE LYS GLY PRO GLY SEQRES 26 A 353 ASP THR SER ASN PHE ASP ASP TYR GLU GLU GLU GLU ILE SEQRES 27 A 353 ARG VAL SEP ILE ASN GLU LYS CYS GLY LYS GLU PHE THR SEQRES 28 A 353 GLU PHE SEQRES 1 B 20 THR THR TYR ALA ASP PHE ILE ALA SER GLY ARG THR GLY SEQRES 2 B 20 ARG ARG ASN ALA ILE HIS ASP MODRES 7BB0 SEP A 10 SER MODIFIED RESIDUE MODRES 7BB0 TPO A 197 THR MODIFIED RESIDUE MODRES 7BB0 SEP A 338 SER MODIFIED RESIDUE HET SEP A 10 10 HET TPO A 197 11 HET SEP A 338 10 HET T7W A 401 30 HETNAM SEP PHOSPHOSERINE HETNAM TPO PHOSPHOTHREONINE HETNAM T7W (R)-3,3-DIMETHYL-5-OXO-5-(6-(3-(PYRIDIN-4-YL)-1,2,4- HETNAM 2 T7W OXADIAZOL-5-YL)-1,4,6,7-TETRAHYDRO-5H-IMIDAZO[4,5- HETNAM 3 T7W C]PYRIDIN-5-YL)PENTANOIC ACID HETSYN SEP PHOSPHONOSERINE HETSYN TPO PHOSPHONOTHREONINE HETSYN T7W 3,3-DIMETHYL-5-OXIDANYLIDENE-5-[(6~{R})-6-(3-PYRIDIN-4- HETSYN 2 T7W YL-1,2,4-OXADIAZOL-5-YL)-3,4,6,7-TETRAHYDROIMIDAZO[4, HETSYN 3 T7W 5-C]PYRIDIN-5-YL]PENTANOIC ACID FORMUL 1 SEP 2(C3 H8 N O6 P) FORMUL 1 TPO C4 H10 N O6 P FORMUL 3 T7W C20 H22 N6 O4 FORMUL 4 HOH *144(H2 O) HELIX 1 AA1 GLY A 1 SER A 32 1 32 HELIX 2 AA2 GLN A 39 ASP A 41 5 3 HELIX 3 AA3 LYS A 76 LYS A 81 1 6 HELIX 4 AA4 GLN A 84 VAL A 98 1 15 HELIX 5 AA5 GLU A 127 GLY A 136 1 10 HELIX 6 AA6 SER A 139 LEU A 160 1 22 HELIX 7 AA7 LYS A 168 GLU A 170 5 3 HELIX 8 AA8 THR A 201 LEU A 205 5 5 HELIX 9 AA9 ALA A 206 LEU A 211 1 6 HELIX 10 AB1 LYS A 217 GLY A 234 1 18 HELIX 11 AB2 GLN A 242 SER A 252 1 11 HELIX 12 AB3 SER A 262 LEU A 273 1 12 HELIX 13 AB4 ASP A 276 ARG A 280 5 5 HELIX 14 AB5 VAL A 288 ASN A 293 1 6 HELIX 15 AB6 HIS A 294 ALA A 298 5 5 HELIX 16 AB7 ASP A 301 GLN A 307 1 7 HELIX 17 AB8 GLU A 346 PHE A 350 5 5 HELIX 18 AB9 THR B 6 SER B 13 1 8 SHEET 1 AA1 5 PHE A 43 THR A 51 0 SHEET 2 AA1 5 GLY A 55 HIS A 62 -1 O LEU A 59 N LYS A 47 SHEET 3 AA1 5 HIS A 68 ASP A 75 -1 O MET A 71 N MET A 58 SHEET 4 AA1 5 ASN A 115 GLU A 121 -1 O LEU A 116 N LEU A 74 SHEET 5 AA1 5 LEU A 106 LYS A 111 -1 N PHE A 108 O VAL A 119 SHEET 1 AA2 2 LEU A 162 ILE A 163 0 SHEET 2 AA2 2 LYS A 189 ARG A 190 -1 O LYS A 189 N ILE A 163 SHEET 1 AA3 2 LEU A 172 ILE A 174 0 SHEET 2 AA3 2 ILE A 180 VAL A 182 -1 O GLN A 181 N LEU A 173 LINK C GLY A 9 N SEP A 10 1555 1555 1.33 LINK C SEP A 10 N GLU A 11 1555 1555 1.33 LINK C TRP A 196 N TPO A 197 1555 1555 1.33 LINK C TPO A 197 N LEU A 198 1555 1555 1.34 LINK C VAL A 337 N SEP A 338 1555 1555 1.33 CRYST1 58.764 73.389 110.885 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017017 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013626 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009018 0.00000