HEADER OXIDOREDUCTASE 22-DEC-20 7BDN TITLE STRUCTURE OF THE STREPTOMYCES COELICOLOR SMALL LACCASE - CUBIC CRYSTAL TITLE 2 FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE COPPER OXIDASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES COELICOLOR (STRAIN ATCC BAA-471 / SOURCE 3 A3(2) / M145); SOURCE 4 ORGANISM_TAXID: 100226; SOURCE 5 STRAIN: ATCC BAA-471 / A3(2) / M145; SOURCE 6 GENE: SCO6712; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS SMALL LACCASE, OXIDOREDUCTASE, CUBIC CRYSTAL FORM EXPDTA X-RAY DIFFRACTION AUTHOR K.ZOVO,S.MAJUMDAR,T.LUKK REVDAT 5 31-JAN-24 7BDN 1 REMARK REVDAT 4 09-MAR-22 7BDN 1 JRNL REVDAT 3 23-FEB-22 7BDN 1 JRNL REVDAT 2 09-FEB-22 7BDN 1 JRNL REVDAT 1 12-JAN-22 7BDN 0 JRNL AUTH K.ZOVO,H.PUPART,A.VAN WIEREN,R.E.GILLILAN,Q.HUANG, JRNL AUTH 2 S.MAJUMDAR,T.LUKK JRNL TITL SUBSTITUTION OF THE METHIONINE AXIAL LIGAND OF THE T1 COPPER JRNL TITL 2 FOR THE FUNGAL-LIKE PHENYLALANINE LIGAND (M298F) CAUSES JRNL TITL 3 LOCAL STRUCTURAL PERTURBATIONS THAT LEAD TO THERMAL JRNL TITL 4 INSTABILITY AND REDUCED CATALYTIC EFFICIENCY OF THE SMALL JRNL TITL 5 LACCASE FROM STREPTOMYCES COELICOLOR A3(2). JRNL REF ACS OMEGA V. 7 6184 2022 JRNL REFN ESSN 2470-1343 JRNL PMID 35224382 JRNL DOI 10.1021/ACSOMEGA.1C06668 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.50 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 50613 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 2567 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.5000 - 7.0500 0.99 2778 165 0.2126 0.2275 REMARK 3 2 7.0400 - 5.6100 1.00 2699 155 0.2257 0.2187 REMARK 3 3 5.6100 - 4.9000 1.00 2692 148 0.1869 0.2230 REMARK 3 4 4.9000 - 4.4600 1.00 2691 135 0.1776 0.2012 REMARK 3 5 4.4600 - 4.1400 1.00 2678 143 0.1705 0.1791 REMARK 3 6 4.1400 - 3.9000 1.00 2685 119 0.1852 0.2191 REMARK 3 7 3.8900 - 3.7000 1.00 2663 153 0.1923 0.2211 REMARK 3 8 3.7000 - 3.5400 1.00 2620 167 0.1872 0.2139 REMARK 3 9 3.5400 - 3.4000 1.00 2652 151 0.2056 0.2133 REMARK 3 10 3.4000 - 3.2900 1.00 2675 135 0.2053 0.1954 REMARK 3 11 3.2900 - 3.1800 1.00 2644 162 0.2068 0.2649 REMARK 3 12 3.1800 - 3.0900 1.00 2624 127 0.2086 0.2345 REMARK 3 13 3.0900 - 3.0100 1.00 2694 132 0.2200 0.2399 REMARK 3 14 3.0100 - 2.9400 1.00 2623 150 0.2042 0.2934 REMARK 3 15 2.9400 - 2.8700 1.00 2651 132 0.2136 0.2391 REMARK 3 16 2.8700 - 2.8100 1.00 2662 128 0.2181 0.2209 REMARK 3 17 2.8100 - 2.7500 1.00 2619 142 0.2320 0.2551 REMARK 3 18 2.7500 - 2.7000 0.99 2696 123 0.2370 0.2623 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.770 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.58 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 38 THROUGH 173 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.4105 -70.1883 -30.4050 REMARK 3 T TENSOR REMARK 3 T11: 0.2669 T22: 0.3431 REMARK 3 T33: 0.2955 T12: 0.0809 REMARK 3 T13: -0.0098 T23: -0.0279 REMARK 3 L TENSOR REMARK 3 L11: 0.3562 L22: 0.5420 REMARK 3 L33: 0.6952 L12: 0.1682 REMARK 3 L13: 0.2455 L23: -0.2059 REMARK 3 S TENSOR REMARK 3 S11: -0.0028 S12: 0.1019 S13: 0.0122 REMARK 3 S21: -0.0718 S22: -0.0258 S23: 0.1144 REMARK 3 S31: -0.0768 S32: -0.1027 S33: 0.0274 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 174 THROUGH 314 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.6339 -61.2344 -11.8419 REMARK 3 T TENSOR REMARK 3 T11: 0.2897 T22: 0.2550 REMARK 3 T33: 0.2365 T12: 0.0458 REMARK 3 T13: -0.0034 T23: -0.0124 REMARK 3 L TENSOR REMARK 3 L11: 0.6665 L22: 0.4472 REMARK 3 L33: 0.6436 L12: 0.0319 REMARK 3 L13: 0.3211 L23: -0.0228 REMARK 3 S TENSOR REMARK 3 S11: -0.0199 S12: -0.0471 S13: 0.0602 REMARK 3 S21: 0.1177 S22: 0.0105 S23: 0.0382 REMARK 3 S31: -0.1003 S32: -0.0364 S33: 0.0079 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 38 THROUGH 173 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.9369 -48.6517 -13.8355 REMARK 3 T TENSOR REMARK 3 T11: 0.3356 T22: 0.2707 REMARK 3 T33: 0.2997 T12: 0.0715 REMARK 3 T13: 0.0293 T23: 0.0096 REMARK 3 L TENSOR REMARK 3 L11: 0.6265 L22: 0.3604 REMARK 3 L33: 0.6354 L12: 0.1469 REMARK 3 L13: 0.1776 L23: -0.1648 REMARK 3 S TENSOR REMARK 3 S11: -0.0732 S12: -0.0934 S13: -0.1174 REMARK 3 S21: 0.1121 S22: 0.0214 S23: 0.0101 REMARK 3 S31: 0.0881 S32: 0.0412 S33: 0.0363 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 174 THROUGH 314 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.9885 -39.6119 -32.4004 REMARK 3 T TENSOR REMARK 3 T11: 0.2522 T22: 0.2907 REMARK 3 T33: 0.2265 T12: 0.0394 REMARK 3 T13: 0.0174 T23: 0.0083 REMARK 3 L TENSOR REMARK 3 L11: 0.4783 L22: 0.6266 REMARK 3 L33: 0.5743 L12: 0.0411 REMARK 3 L13: 0.1299 L23: -0.2630 REMARK 3 S TENSOR REMARK 3 S11: 0.0014 S12: 0.1210 S13: -0.0343 REMARK 3 S21: -0.0792 S22: -0.0121 S23: -0.0610 REMARK 3 S31: 0.0316 S32: 0.0937 S33: 0.0221 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN B REMARK 3 ATOM PAIRS NUMBER : 2605 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7BDN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-DEC-20. REMARK 100 THE DEPOSITION ID IS D_1292113182. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-APR-19 REMARK 200 TEMPERATURE (KELVIN) : 123 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : SEALED TUBE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-003 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5419 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50726 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 29.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.400 REMARK 200 R MERGE (I) : 0.16600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 7.40 REMARK 200 R MERGE FOR SHELL (I) : 0.74200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: 3CG8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN CONCENTRATION WAS 20 MG/ML IN REMARK 280 20 MM TRIS-HCL BUFFER (PH 7.5). MOTHER LIQUOR WAS MADE UP OF 40% REMARK 280 MPD, 20 MM NH4-OAC AND 100 MM HEPES (PH 7.5). THE PROTEIN WAS REMARK 280 MIXED IN 2:1 RATIO WITH PROTEIN TO MOTHER LIQUOR., VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 88.49050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 88.49050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 88.49050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 88.49050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 88.49050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 88.49050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 88.49050 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 88.49050 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 88.49050 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 88.49050 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 88.49050 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 88.49050 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 88.49050 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 88.49050 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 88.49050 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 88.49050 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 88.49050 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 88.49050 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -118.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 -88.49050 REMARK 350 BIOMT3 2 0.000000 -1.000000 0.000000 -88.49050 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 88.49050 REMARK 350 BIOMT2 3 0.000000 0.000000 -1.000000 -88.49050 REMARK 350 BIOMT3 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11790 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -126.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 661 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 670 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 675 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 668 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 673 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 677 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 465 ARG A 3 REMARK 465 ARG A 4 REMARK 465 GLY A 5 REMARK 465 PHE A 6 REMARK 465 ASN A 7 REMARK 465 ARG A 8 REMARK 465 ARG A 9 REMARK 465 VAL A 10 REMARK 465 LEU A 11 REMARK 465 LEU A 12 REMARK 465 GLY A 13 REMARK 465 GLY A 14 REMARK 465 ALA A 15 REMARK 465 ALA A 16 REMARK 465 ALA A 17 REMARK 465 ALA A 18 REMARK 465 THR A 19 REMARK 465 SER A 20 REMARK 465 LEU A 21 REMARK 465 SER A 22 REMARK 465 ILE A 23 REMARK 465 ALA A 24 REMARK 465 PRO A 25 REMARK 465 GLU A 26 REMARK 465 VAL A 27 REMARK 465 ALA A 28 REMARK 465 GLY A 29 REMARK 465 ALA A 30 REMARK 465 ALA A 31 REMARK 465 PRO A 32 REMARK 465 ALA A 33 REMARK 465 ALA A 34 REMARK 465 LYS A 35 REMARK 465 GLY A 36 REMARK 465 ILE A 37 REMARK 465 GLU A 315 REMARK 465 PRO A 316 REMARK 465 HIS A 317 REMARK 465 GLU A 318 REMARK 465 HIS A 319 REMARK 465 GLY A 320 REMARK 465 GLY A 321 REMARK 465 ALA A 322 REMARK 465 THR A 323 REMARK 465 ALA A 324 REMARK 465 LYS A 325 REMARK 465 SER A 326 REMARK 465 GLY A 327 REMARK 465 GLU A 328 REMARK 465 SER A 329 REMARK 465 GLY A 330 REMARK 465 GLU A 331 REMARK 465 PRO A 332 REMARK 465 THR A 333 REMARK 465 GLY A 334 REMARK 465 GLY A 335 REMARK 465 ALA A 336 REMARK 465 ALA A 337 REMARK 465 ALA A 338 REMARK 465 HIS A 339 REMARK 465 GLU A 340 REMARK 465 HIS A 341 REMARK 465 GLU A 342 REMARK 465 HIS A 343 REMARK 465 MET B 1 REMARK 465 ASP B 2 REMARK 465 ARG B 3 REMARK 465 ARG B 4 REMARK 465 GLY B 5 REMARK 465 PHE B 6 REMARK 465 ASN B 7 REMARK 465 ARG B 8 REMARK 465 ARG B 9 REMARK 465 VAL B 10 REMARK 465 LEU B 11 REMARK 465 LEU B 12 REMARK 465 GLY B 13 REMARK 465 GLY B 14 REMARK 465 ALA B 15 REMARK 465 ALA B 16 REMARK 465 ALA B 17 REMARK 465 ALA B 18 REMARK 465 THR B 19 REMARK 465 SER B 20 REMARK 465 LEU B 21 REMARK 465 SER B 22 REMARK 465 ILE B 23 REMARK 465 ALA B 24 REMARK 465 PRO B 25 REMARK 465 GLU B 26 REMARK 465 VAL B 27 REMARK 465 ALA B 28 REMARK 465 GLY B 29 REMARK 465 ALA B 30 REMARK 465 ALA B 31 REMARK 465 PRO B 32 REMARK 465 ALA B 33 REMARK 465 ALA B 34 REMARK 465 LYS B 35 REMARK 465 GLY B 36 REMARK 465 ILE B 37 REMARK 465 GLU B 315 REMARK 465 PRO B 316 REMARK 465 HIS B 317 REMARK 465 GLU B 318 REMARK 465 HIS B 319 REMARK 465 GLY B 320 REMARK 465 GLY B 321 REMARK 465 ALA B 322 REMARK 465 THR B 323 REMARK 465 ALA B 324 REMARK 465 LYS B 325 REMARK 465 SER B 326 REMARK 465 GLY B 327 REMARK 465 GLU B 328 REMARK 465 SER B 329 REMARK 465 GLY B 330 REMARK 465 GLU B 331 REMARK 465 PRO B 332 REMARK 465 THR B 333 REMARK 465 GLY B 334 REMARK 465 GLY B 335 REMARK 465 ALA B 336 REMARK 465 ALA B 337 REMARK 465 ALA B 338 REMARK 465 HIS B 339 REMARK 465 GLU B 340 REMARK 465 HIS B 341 REMARK 465 GLU B 342 REMARK 465 HIS B 343 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 153 -168.91 -126.62 REMARK 500 VAL A 159 -2.78 -141.11 REMARK 500 GLU A 163 3.62 -65.46 REMARK 500 ASP A 197 -120.03 48.84 REMARK 500 TRP B 153 -168.12 -127.57 REMARK 500 VAL B 159 -3.10 -141.52 REMARK 500 GLU B 163 0.72 -64.77 REMARK 500 ASP B 197 -120.09 48.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 676 DISTANCE = 6.32 ANGSTROMS REMARK 525 HOH B 678 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH B 679 DISTANCE = 6.33 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 401 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 104 NE2 REMARK 620 2 HIS A 156 NE2 106.8 REMARK 620 3 HIS A 289 NE2 68.7 82.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 402 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 158 NE2 REMARK 620 2 HIS A 236 NE2 132.3 REMARK 620 3 HIS A 287 NE2 130.5 3.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 403 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 231 ND1 REMARK 620 2 CYS A 288 SG 128.3 REMARK 620 3 HIS A 293 ND1 106.5 121.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 401 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 104 NE2 REMARK 620 2 HIS B 156 NE2 105.9 REMARK 620 3 HIS B 289 NE2 67.1 80.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 402 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 158 NE2 REMARK 620 2 HIS B 287 NE2 128.8 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 403 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 231 ND1 REMARK 620 2 CYS B 288 SG 125.9 REMARK 620 3 HIS B 293 ND1 109.6 121.1 REMARK 620 N 1 2 DBREF 7BDN A 1 343 UNP Q9XAL8 Q9XAL8_STRCO 1 343 DBREF 7BDN B 1 343 UNP Q9XAL8 Q9XAL8_STRCO 1 343 SEQRES 1 A 343 MET ASP ARG ARG GLY PHE ASN ARG ARG VAL LEU LEU GLY SEQRES 2 A 343 GLY ALA ALA ALA ALA THR SER LEU SER ILE ALA PRO GLU SEQRES 3 A 343 VAL ALA GLY ALA ALA PRO ALA ALA LYS GLY ILE THR ALA SEQRES 4 A 343 ARG THR ALA PRO ALA GLY GLY GLU VAL ARG HIS LEU LYS SEQRES 5 A 343 MET TYR ALA GLU LYS LEU ALA ASP GLY GLN MET GLY TYR SEQRES 6 A 343 GLY PHE GLU LYS GLY LYS ALA SER VAL PRO GLY PRO LEU SEQRES 7 A 343 ILE GLU VAL ASN GLU GLY ASP THR LEU HIS ILE GLU PHE SEQRES 8 A 343 THR ASN THR MET ASP VAL ARG ALA SER LEU HIS VAL HIS SEQRES 9 A 343 GLY LEU ASP TYR GLU ILE SER SER ASP GLY THR ALA MET SEQRES 10 A 343 ASN LYS SER ASP VAL GLU PRO GLY GLY THR ARG THR TYR SEQRES 11 A 343 THR TRP ARG THR HIS LYS PRO GLY ARG ARG ASP ASP GLY SEQRES 12 A 343 THR TRP ARG PRO GLY SER ALA GLY TYR TRP HIS TYR HIS SEQRES 13 A 343 ASP HIS VAL VAL GLY THR GLU HIS GLY THR GLY GLY ILE SEQRES 14 A 343 ARG ASN GLY LEU TYR GLY PRO VAL ILE VAL ARG ARG LYS SEQRES 15 A 343 GLY ASP VAL LEU PRO ASP ALA THR HIS THR ILE VAL PHE SEQRES 16 A 343 ASN ASP MET THR ILE ASN ASN ARG LYS PRO HIS THR GLY SEQRES 17 A 343 PRO ASP PHE GLU ALA THR VAL GLY ASP ARG VAL GLU ILE SEQRES 18 A 343 VAL MET ILE THR HIS GLY GLU TYR TYR HIS THR PHE HIS SEQRES 19 A 343 MET HIS GLY HIS ARG TRP ALA ASP ASN ARG THR GLY ILE SEQRES 20 A 343 LEU THR GLY PRO ASP ASP PRO SER ARG VAL ILE ASP ASN SEQRES 21 A 343 LYS ILE THR GLY PRO ALA ASP SER PHE GLY PHE GLN ILE SEQRES 22 A 343 ILE ALA GLY GLU GLY VAL GLY ALA GLY ALA TRP MET TYR SEQRES 23 A 343 HIS CYS HIS VAL GLN SER HIS SER ASP MET GLY MET VAL SEQRES 24 A 343 GLY LEU PHE LEU VAL LYS LYS PRO ASP GLY THR ILE PRO SEQRES 25 A 343 GLY TYR GLU PRO HIS GLU HIS GLY GLY ALA THR ALA LYS SEQRES 26 A 343 SER GLY GLU SER GLY GLU PRO THR GLY GLY ALA ALA ALA SEQRES 27 A 343 HIS GLU HIS GLU HIS SEQRES 1 B 343 MET ASP ARG ARG GLY PHE ASN ARG ARG VAL LEU LEU GLY SEQRES 2 B 343 GLY ALA ALA ALA ALA THR SER LEU SER ILE ALA PRO GLU SEQRES 3 B 343 VAL ALA GLY ALA ALA PRO ALA ALA LYS GLY ILE THR ALA SEQRES 4 B 343 ARG THR ALA PRO ALA GLY GLY GLU VAL ARG HIS LEU LYS SEQRES 5 B 343 MET TYR ALA GLU LYS LEU ALA ASP GLY GLN MET GLY TYR SEQRES 6 B 343 GLY PHE GLU LYS GLY LYS ALA SER VAL PRO GLY PRO LEU SEQRES 7 B 343 ILE GLU VAL ASN GLU GLY ASP THR LEU HIS ILE GLU PHE SEQRES 8 B 343 THR ASN THR MET ASP VAL ARG ALA SER LEU HIS VAL HIS SEQRES 9 B 343 GLY LEU ASP TYR GLU ILE SER SER ASP GLY THR ALA MET SEQRES 10 B 343 ASN LYS SER ASP VAL GLU PRO GLY GLY THR ARG THR TYR SEQRES 11 B 343 THR TRP ARG THR HIS LYS PRO GLY ARG ARG ASP ASP GLY SEQRES 12 B 343 THR TRP ARG PRO GLY SER ALA GLY TYR TRP HIS TYR HIS SEQRES 13 B 343 ASP HIS VAL VAL GLY THR GLU HIS GLY THR GLY GLY ILE SEQRES 14 B 343 ARG ASN GLY LEU TYR GLY PRO VAL ILE VAL ARG ARG LYS SEQRES 15 B 343 GLY ASP VAL LEU PRO ASP ALA THR HIS THR ILE VAL PHE SEQRES 16 B 343 ASN ASP MET THR ILE ASN ASN ARG LYS PRO HIS THR GLY SEQRES 17 B 343 PRO ASP PHE GLU ALA THR VAL GLY ASP ARG VAL GLU ILE SEQRES 18 B 343 VAL MET ILE THR HIS GLY GLU TYR TYR HIS THR PHE HIS SEQRES 19 B 343 MET HIS GLY HIS ARG TRP ALA ASP ASN ARG THR GLY ILE SEQRES 20 B 343 LEU THR GLY PRO ASP ASP PRO SER ARG VAL ILE ASP ASN SEQRES 21 B 343 LYS ILE THR GLY PRO ALA ASP SER PHE GLY PHE GLN ILE SEQRES 22 B 343 ILE ALA GLY GLU GLY VAL GLY ALA GLY ALA TRP MET TYR SEQRES 23 B 343 HIS CYS HIS VAL GLN SER HIS SER ASP MET GLY MET VAL SEQRES 24 B 343 GLY LEU PHE LEU VAL LYS LYS PRO ASP GLY THR ILE PRO SEQRES 25 B 343 GLY TYR GLU PRO HIS GLU HIS GLY GLY ALA THR ALA LYS SEQRES 26 B 343 SER GLY GLU SER GLY GLU PRO THR GLY GLY ALA ALA ALA SEQRES 27 B 343 HIS GLU HIS GLU HIS HET CU A 401 1 HET CU A 402 1 HET CU A 403 1 HET CU B 401 1 HET CU B 402 1 HET CU B 403 1 HETNAM CU COPPER (II) ION FORMUL 3 CU 6(CU 2+) FORMUL 9 HOH *355(H2 O) HELIX 1 AA1 GLU A 109 ASP A 113 5 5 HELIX 2 AA2 GLY A 165 GLY A 172 1 8 HELIX 3 AA3 VAL A 290 MET A 296 1 7 HELIX 4 AA4 GLU B 109 ASP B 113 5 5 HELIX 5 AA5 GLY B 165 GLY B 172 1 8 HELIX 6 AA6 VAL B 290 MET B 296 1 7 SHEET 1 AA1 4 MET A 63 GLY A 66 0 SHEET 2 AA1 4 VAL A 48 LYS A 57 -1 N GLU A 56 O GLY A 64 SHEET 3 AA1 4 THR A 86 ASN A 93 1 O THR A 86 N ARG A 49 SHEET 4 AA1 4 THR A 127 ARG A 133 -1 O TRP A 132 N LEU A 87 SHEET 1 AA2 4 ILE A 79 ASN A 82 0 SHEET 2 AA2 4 TYR A 174 ARG A 180 1 O ILE A 178 N ILE A 79 SHEET 3 AA2 4 GLY A 151 HIS A 156 -1 N TRP A 153 O VAL A 177 SHEET 4 AA2 4 HIS A 102 VAL A 103 -1 N HIS A 102 O HIS A 156 SHEET 1 AA3 2 GLY A 138 ARG A 139 0 SHEET 2 AA3 2 TRP A 145 ARG A 146 -1 O ARG A 146 N GLY A 138 SHEET 1 AA4 4 THR A 199 ILE A 200 0 SHEET 2 AA4 4 ALA A 189 ASN A 196 -1 N ASN A 196 O THR A 199 SHEET 3 AA4 4 ARG A 218 HIS A 226 1 O GLU A 220 N HIS A 191 SHEET 4 AA4 4 SER A 268 ILE A 274 -1 O PHE A 269 N MET A 223 SHEET 1 AA5 5 PHE A 211 THR A 214 0 SHEET 2 AA5 5 VAL A 299 LYS A 305 1 O LEU A 303 N PHE A 211 SHEET 3 AA5 5 GLY A 282 CYS A 288 -1 N TRP A 284 O PHE A 302 SHEET 4 AA5 5 HIS A 231 MET A 235 -1 N HIS A 234 O HIS A 287 SHEET 5 AA5 5 ASN A 260 THR A 263 -1 O THR A 263 N HIS A 231 SHEET 1 AA6 2 TRP A 240 ALA A 241 0 SHEET 2 AA6 2 VAL A 257 ILE A 258 -1 O ILE A 258 N TRP A 240 SHEET 1 AA7 4 MET B 63 GLY B 66 0 SHEET 2 AA7 4 VAL B 48 LYS B 57 -1 N GLU B 56 O GLY B 64 SHEET 3 AA7 4 THR B 86 ASN B 93 1 O THR B 86 N ARG B 49 SHEET 4 AA7 4 THR B 127 ARG B 133 -1 O TRP B 132 N LEU B 87 SHEET 1 AA8 4 ILE B 79 ASN B 82 0 SHEET 2 AA8 4 TYR B 174 ARG B 180 1 O ARG B 180 N VAL B 81 SHEET 3 AA8 4 GLY B 151 HIS B 156 -1 N TRP B 153 O VAL B 177 SHEET 4 AA8 4 HIS B 102 VAL B 103 -1 N HIS B 102 O HIS B 156 SHEET 1 AA9 2 GLY B 138 ARG B 139 0 SHEET 2 AA9 2 TRP B 145 ARG B 146 -1 O ARG B 146 N GLY B 138 SHEET 1 AB1 4 THR B 199 ILE B 200 0 SHEET 2 AB1 4 ALA B 189 ASN B 196 -1 N ASN B 196 O THR B 199 SHEET 3 AB1 4 ARG B 218 HIS B 226 1 O GLU B 220 N HIS B 191 SHEET 4 AB1 4 SER B 268 ILE B 274 -1 O PHE B 269 N MET B 223 SHEET 1 AB2 5 PHE B 211 THR B 214 0 SHEET 2 AB2 5 VAL B 299 LYS B 305 1 O LEU B 303 N PHE B 211 SHEET 3 AB2 5 GLY B 282 CYS B 288 -1 N TRP B 284 O PHE B 302 SHEET 4 AB2 5 HIS B 231 MET B 235 -1 N HIS B 234 O HIS B 287 SHEET 5 AB2 5 ASN B 260 THR B 263 -1 O THR B 263 N HIS B 231 SHEET 1 AB3 2 TRP B 240 ALA B 241 0 SHEET 2 AB3 2 VAL B 257 ILE B 258 -1 O ILE B 258 N TRP B 240 LINK NE2 HIS A 104 CU CU A 401 1555 1555 2.13 LINK NE2 HIS A 156 CU CU A 401 1555 1555 2.16 LINK NE2 HIS A 158 CU CU A 402 1555 1555 2.63 LINK ND1 HIS A 231 CU CU A 403 1555 1555 1.98 LINK NE2 HIS A 236 CU CU A 402 1555 11545 2.49 LINK NE2 HIS A 287 CU CU A 402 1555 11545 2.69 LINK SG CYS A 288 CU CU A 403 1555 1555 2.16 LINK NE2 HIS A 289 CU CU A 401 1555 11545 2.13 LINK ND1 HIS A 293 CU CU A 403 1555 1555 2.06 LINK NE2 HIS B 104 CU CU B 401 1555 1555 2.12 LINK NE2 HIS B 156 CU CU B 401 1555 1555 2.16 LINK NE2 HIS B 158 CU CU B 402 1555 1555 2.61 LINK ND1 HIS B 231 CU CU B 403 1555 1555 2.00 LINK NE2 HIS B 287 CU CU B 402 1555 5555 2.65 LINK SG CYS B 288 CU CU B 403 1555 1555 2.12 LINK NE2 HIS B 289 CU CU B 401 1555 5555 2.14 LINK ND1 HIS B 293 CU CU B 403 1555 1555 2.04 CISPEP 1 VAL A 74 PRO A 75 0 -1.30 CISPEP 2 GLY A 208 PRO A 209 0 3.91 CISPEP 3 VAL B 74 PRO B 75 0 -1.64 CISPEP 4 GLY B 208 PRO B 209 0 4.34 CRYST1 176.981 176.981 176.981 90.00 90.00 90.00 P 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005650 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005650 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005650 0.00000