data_7BE3 # _entry.id 7BE3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.342 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 7BE3 WWPDB D_1292113069 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7BE3 _pdbx_database_status.recvd_initial_deposition_date 2020-12-22 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Trovao, F.' 1 0000-0002-9995-4909 'Carvalho, A.L.' 2 0000-0002-3824-0240 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country GE _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Chemistry _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 0947-6539 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 27 _citation.language ? _citation.page_first 7951 _citation.page_last 7958 _citation.title ;Structural Insights into the Molecular Recognition Mechanism of the Cancer and Pathogenic Epitope, LacdiNAc by Immune-Related Lectins. ; _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1002/chem.202100800 _citation.pdbx_database_id_PubMed 33826192 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lima, C.D.L.' 1 ? primary 'Coelho, H.' 2 ? primary 'Gimeno, A.' 3 ? primary 'Trovao, F.' 4 ? primary 'Diniz, A.' 5 ? primary 'Dias, J.S.' 6 ? primary 'Jimenez-Barbero, J.' 7 ? primary 'Corzana, F.' 8 ? primary 'Carvalho, A.L.' 9 ? primary 'Cabrita, E.J.' 10 ? primary 'Marcelo, F.' 11 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 7BE3 _cell.details ? _cell.formula_units_Z ? _cell.length_a 36.039 _cell.length_a_esd ? _cell.length_b 58.048 _cell.length_b_esd ? _cell.length_c 62.286 _cell.length_c_esd ? _cell.volume 130301.806 _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BE3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Galectin-3 15735.129 1 ? ? ? ? 2 branched syn '2-acetamido-2-deoxy-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose' 424.401 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 5 water nat water 18.015 184 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Gal-3,35 kDa lectin,Carbohydrate-binding protein 35,CBP 35,Galactose-specific lectin 3,Galactoside-binding protein,GALBP,IgE-binding protein,L-31,Laminin-binding protein,Lectin L-29,Mac-2 antigen ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MLIVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVFPF ESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASYTMI ; _entity_poly.pdbx_seq_one_letter_code_can ;MLIVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVFPF ESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASYTMI ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LEU n 1 3 ILE n 1 4 VAL n 1 5 PRO n 1 6 TYR n 1 7 ASN n 1 8 LEU n 1 9 PRO n 1 10 LEU n 1 11 PRO n 1 12 GLY n 1 13 GLY n 1 14 VAL n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 MET n 1 19 LEU n 1 20 ILE n 1 21 THR n 1 22 ILE n 1 23 LEU n 1 24 GLY n 1 25 THR n 1 26 VAL n 1 27 LYS n 1 28 PRO n 1 29 ASN n 1 30 ALA n 1 31 ASN n 1 32 ARG n 1 33 ILE n 1 34 ALA n 1 35 LEU n 1 36 ASP n 1 37 PHE n 1 38 GLN n 1 39 ARG n 1 40 GLY n 1 41 ASN n 1 42 ASP n 1 43 VAL n 1 44 ALA n 1 45 PHE n 1 46 HIS n 1 47 PHE n 1 48 ASN n 1 49 PRO n 1 50 ARG n 1 51 PHE n 1 52 ASN n 1 53 GLU n 1 54 ASN n 1 55 ASN n 1 56 ARG n 1 57 ARG n 1 58 VAL n 1 59 ILE n 1 60 VAL n 1 61 CYS n 1 62 ASN n 1 63 THR n 1 64 LYS n 1 65 LEU n 1 66 ASP n 1 67 ASN n 1 68 ASN n 1 69 TRP n 1 70 GLY n 1 71 ARG n 1 72 GLU n 1 73 GLU n 1 74 ARG n 1 75 GLN n 1 76 SER n 1 77 VAL n 1 78 PHE n 1 79 PRO n 1 80 PHE n 1 81 GLU n 1 82 SER n 1 83 GLY n 1 84 LYS n 1 85 PRO n 1 86 PHE n 1 87 LYS n 1 88 ILE n 1 89 GLN n 1 90 VAL n 1 91 LEU n 1 92 VAL n 1 93 GLU n 1 94 PRO n 1 95 ASP n 1 96 HIS n 1 97 PHE n 1 98 LYS n 1 99 VAL n 1 100 ALA n 1 101 VAL n 1 102 ASN n 1 103 ASP n 1 104 ALA n 1 105 HIS n 1 106 LEU n 1 107 LEU n 1 108 GLN n 1 109 TYR n 1 110 ASN n 1 111 HIS n 1 112 ARG n 1 113 VAL n 1 114 LYS n 1 115 LYS n 1 116 LEU n 1 117 ASN n 1 118 GLU n 1 119 ILE n 1 120 SER n 1 121 LYS n 1 122 LEU n 1 123 GLY n 1 124 ILE n 1 125 SER n 1 126 GLY n 1 127 ASP n 1 128 ILE n 1 129 ASP n 1 130 LEU n 1 131 THR n 1 132 SER n 1 133 ALA n 1 134 SER n 1 135 TYR n 1 136 THR n 1 137 MET n 1 138 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 138 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'LGALS3, MAC2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code LEG3_HUMAN _struct_ref.pdbx_db_accession P17931 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LIVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVFPFE SGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASYTMI ; _struct_ref.pdbx_align_begin 114 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7BE3 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 138 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P17931 _struct_ref_seq.db_align_beg 114 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 250 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 114 _struct_ref_seq.pdbx_auth_seq_align_end 250 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 7BE3 _struct_ref_seq_dif.mon_id MET _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P17931 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'initiating methionine' _struct_ref_seq_dif.pdbx_auth_seq_num 113 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NDG 'D-saccharide, alpha linking' . 2-acetamido-2-deoxy-alpha-D-glucopyranose ;N-acetyl-alpha-D-glucosamine; 2-acetamido-2-deoxy-alpha-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE ; 'C8 H15 N O6' 221.208 NGA 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-galactopyranose ;N-acetyl-beta-D-galactosamine; 2-acetamido-2-deoxy-beta-D-galactose; 2-acetamido-2-deoxy-D-galactose; 2-acetamido-2-deoxy-galactose; N-ACETYL-D-GALACTOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7BE3 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.07 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 40.59 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '32% PEG 4000, 100 mM Tris-HCl pH 7.5, 100 mM Magnesium chloride, 8 mM beta-mercaptoethanol' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-01-31 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.976 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALBA BEAMLINE XALOC' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.976 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline XALOC _diffrn_source.pdbx_synchrotron_site ALBA # _reflns.B_iso_Wilson_estimate 14.34 _reflns.entry_id 7BE3 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.25 _reflns.d_resolution_low 31.19 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all 287616 _reflns.number_obs 36869 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.85 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 20.71 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.25 _reflns_shell.d_res_low 1.295 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs 27673 _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 3611 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.88 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 18.06 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7BE3 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.25 _refine.ls_d_res_low 31.19 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 36843 _refine.ls_number_reflns_R_free 3480 _refine.ls_number_reflns_R_work 66273 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.85 _refine.ls_percent_reflns_R_free 4.99 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1717 _refine.ls_R_factor_R_free 0.1949 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1704 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.93 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 3zsl _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 20.3602 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1590 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.25 _refine_hist.d_res_low 31.19 _refine_hist.number_atoms_solvent 184 _refine_hist.number_atoms_total 1329 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1109 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 36 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0045 ? 1214 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.8417 ? 1653 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0929 ? 187 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0060 ? 216 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 24.9849 ? 166 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.25 1.27 . . 167 2643 99.47 . . . 0.3291 . 0.3633 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.27 1.29 . . 126 2684 99.89 . . . 0.2731 . 0.3427 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.29 1.30 . . 146 2579 99.67 . . . 0.3844 . 0.3218 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.30 1.32 . . 111 2699 99.89 . . . 0.3145 . 0.3112 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.32 1.35 . . 149 2620 99.64 . . . 0.3020 . 0.2902 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.35 1.37 . . 130 2612 99.67 . . . 0.3044 . 0.2835 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.37 1.39 . . 145 2716 99.79 . . . 0.2490 . 0.2596 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.39 1.42 . . 126 2672 99.89 . . . 0.2743 . 0.2244 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.42 1.45 . . 160 2609 99.75 . . . 0.2228 . 0.2151 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.45 1.48 . . 133 2651 99.93 . . . 0.2082 . 0.1875 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.48 1.52 . . 158 2643 99.93 . . . 0.2000 . 0.1844 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.52 1.55 . . 158 2613 99.78 . . . 0.2334 . 0.1830 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.55 1.60 . . 114 2691 100.00 . . . 0.1794 . 0.1681 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.60 1.64 . . 119 2685 99.96 . . . 0.1770 . 0.1553 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.64 1.70 . . 133 2629 100.00 . . . 0.1521 . 0.1510 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.70 1.76 . . 104 2704 100.00 . . . 0.1954 . 0.1531 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.76 1.83 . . 136 2654 100.00 . . . 0.2062 . 0.1529 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.83 1.91 . . 137 2640 99.96 . . . 0.2043 . 0.1570 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.91 2.01 . . 129 2711 100.00 . . . 0.1477 . 0.1429 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.01 2.14 . . 145 2614 99.96 . . . 0.1571 . 0.1603 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.14 2.30 . . 144 2645 99.93 . . . 0.1898 . 0.1551 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.30 2.53 . . 148 2660 99.96 . . . 0.1977 . 0.1629 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.53 2.90 . . 150 2638 99.93 . . . 0.1770 . 0.1702 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.90 3.65 . . 140 2646 99.93 . . . 0.1917 . 0.1483 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.65 31.19 . . 172 2615 99.46 . . . 0.1805 . 0.1520 . . . . . . . . . . . # _struct.entry_id 7BE3 _struct.title 'Human Galectin-3 in complex with LacdiNAc' _struct.pdbx_descriptor Galectin-3 _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7BE3 _struct_keywords.text 'Galectin-3, LacdiNAc, LDN, glycan, lectin, immune, SUGAR BINDING PROTEIN' _struct_keywords.pdbx_keywords 'SUGAR BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id AA1 _struct_conf.beg_label_comp_id LYS _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 115 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id ILE _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 119 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id LYS _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 227 _struct_conf.end_auth_comp_id ILE _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 231 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag both _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_comp_id NDG _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_label_atom_id O4 _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_comp_id NGA _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id C1 _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id C _struct_conn.ptnr1_auth_comp_id NDG _struct_conn.ptnr1_auth_seq_id 1 _struct_conn.ptnr2_auth_asym_id C _struct_conn.ptnr2_auth_comp_id NGA _struct_conn.ptnr2_auth_seq_id 2 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.388 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id VAL _struct_mon_prot_cis.label_seq_id 4 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id VAL _struct_mon_prot_cis.auth_seq_id 116 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 5 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 117 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.10 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 6 ? AA3 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TYR A 6 ? PRO A 9 ? TYR A 118 PRO A 121 AA1 2 LYS A 121 ? GLY A 126 ? LYS A 233 GLY A 238 AA1 3 ILE A 33 ? ARG A 39 ? ILE A 145 ARG A 151 AA1 4 ASP A 42 ? GLU A 53 ? ASP A 154 GLU A 165 AA1 5 ARG A 56 ? LEU A 65 ? ARG A 168 LEU A 177 AA1 6 ASN A 68 ? TRP A 69 ? ASN A 180 TRP A 181 AA2 1 TYR A 6 ? PRO A 9 ? TYR A 118 PRO A 121 AA2 2 LYS A 121 ? GLY A 126 ? LYS A 233 GLY A 238 AA2 3 ILE A 33 ? ARG A 39 ? ILE A 145 ARG A 151 AA2 4 ASP A 42 ? GLU A 53 ? ASP A 154 GLU A 165 AA2 5 ARG A 56 ? LEU A 65 ? ARG A 168 LEU A 177 AA2 6 GLU A 73 ? GLN A 75 ? GLU A 185 GLN A 187 AA3 1 ALA A 104 ? ASN A 110 ? ALA A 216 ASN A 222 AA3 2 HIS A 96 ? VAL A 101 ? HIS A 208 VAL A 213 AA3 3 PRO A 85 ? VAL A 92 ? PRO A 197 VAL A 204 AA3 4 MET A 18 ? VAL A 26 ? MET A 130 VAL A 138 AA3 5 ILE A 128 ? MET A 137 ? ILE A 240 MET A 249 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LEU A 8 ? N LEU A 120 O LEU A 122 ? O LEU A 234 AA1 2 3 O LYS A 121 ? O LYS A 233 N GLN A 38 ? N GLN A 150 AA1 3 4 N PHE A 37 ? N PHE A 149 O PHE A 45 ? O PHE A 157 AA1 4 5 N ARG A 50 ? N ARG A 162 O VAL A 58 ? O VAL A 170 AA1 5 6 N LEU A 65 ? N LEU A 177 O ASN A 68 ? O ASN A 180 AA2 1 2 N LEU A 8 ? N LEU A 120 O LEU A 122 ? O LEU A 234 AA2 2 3 O LYS A 121 ? O LYS A 233 N GLN A 38 ? N GLN A 150 AA2 3 4 N PHE A 37 ? N PHE A 149 O PHE A 45 ? O PHE A 157 AA2 4 5 N ARG A 50 ? N ARG A 162 O VAL A 58 ? O VAL A 170 AA2 5 6 N CYS A 61 ? N CYS A 173 O GLU A 73 ? O GLU A 185 AA3 1 2 O LEU A 106 ? O LEU A 218 N VAL A 99 ? N VAL A 211 AA3 2 3 O LYS A 98 ? O LYS A 210 N LEU A 91 ? N LEU A 203 AA3 3 4 O PHE A 86 ? O PHE A 198 N GLY A 24 ? N GLY A 136 AA3 4 5 N LEU A 19 ? N LEU A 131 O THR A 136 ? O THR A 248 # _atom_sites.entry_id 7BE3 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.027748 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017227 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016055 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? CL ? ? 9.50761 7.44341 ? ? 1.04373 23.83732 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 113 113 MET MET A . n A 1 2 LEU 2 114 114 LEU LEU A . n A 1 3 ILE 3 115 115 ILE ILE A . n A 1 4 VAL 4 116 116 VAL VAL A . n A 1 5 PRO 5 117 117 PRO PRO A . n A 1 6 TYR 6 118 118 TYR TYR A . n A 1 7 ASN 7 119 119 ASN ASN A . n A 1 8 LEU 8 120 120 LEU LEU A . n A 1 9 PRO 9 121 121 PRO PRO A . n A 1 10 LEU 10 122 122 LEU LEU A . n A 1 11 PRO 11 123 123 PRO PRO A . n A 1 12 GLY 12 124 124 GLY GLY A . n A 1 13 GLY 13 125 125 GLY GLY A . n A 1 14 VAL 14 126 126 VAL VAL A . n A 1 15 VAL 15 127 127 VAL VAL A . n A 1 16 PRO 16 128 128 PRO PRO A . n A 1 17 ARG 17 129 129 ARG ARG A . n A 1 18 MET 18 130 130 MET MET A . n A 1 19 LEU 19 131 131 LEU LEU A . n A 1 20 ILE 20 132 132 ILE ILE A . n A 1 21 THR 21 133 133 THR THR A . n A 1 22 ILE 22 134 134 ILE ILE A . n A 1 23 LEU 23 135 135 LEU LEU A . n A 1 24 GLY 24 136 136 GLY GLY A . n A 1 25 THR 25 137 137 THR THR A . n A 1 26 VAL 26 138 138 VAL VAL A . n A 1 27 LYS 27 139 139 LYS LYS A . n A 1 28 PRO 28 140 140 PRO PRO A . n A 1 29 ASN 29 141 141 ASN ASN A . n A 1 30 ALA 30 142 142 ALA ALA A . n A 1 31 ASN 31 143 143 ASN ASN A . n A 1 32 ARG 32 144 144 ARG ARG A . n A 1 33 ILE 33 145 145 ILE ILE A . n A 1 34 ALA 34 146 146 ALA ALA A . n A 1 35 LEU 35 147 147 LEU LEU A . n A 1 36 ASP 36 148 148 ASP ASP A . n A 1 37 PHE 37 149 149 PHE PHE A . n A 1 38 GLN 38 150 150 GLN GLN A . n A 1 39 ARG 39 151 151 ARG ARG A . n A 1 40 GLY 40 152 152 GLY GLY A . n A 1 41 ASN 41 153 153 ASN ASN A . n A 1 42 ASP 42 154 154 ASP ASP A . n A 1 43 VAL 43 155 155 VAL VAL A . n A 1 44 ALA 44 156 156 ALA ALA A . n A 1 45 PHE 45 157 157 PHE PHE A . n A 1 46 HIS 46 158 158 HIS HIS A . n A 1 47 PHE 47 159 159 PHE PHE A . n A 1 48 ASN 48 160 160 ASN ASN A . n A 1 49 PRO 49 161 161 PRO PRO A . n A 1 50 ARG 50 162 162 ARG ARG A . n A 1 51 PHE 51 163 163 PHE PHE A . n A 1 52 ASN 52 164 164 ASN ASN A . n A 1 53 GLU 53 165 165 GLU GLU A . n A 1 54 ASN 54 166 166 ASN ASN A . n A 1 55 ASN 55 167 167 ASN ASN A . n A 1 56 ARG 56 168 168 ARG ARG A . n A 1 57 ARG 57 169 169 ARG ARG A . n A 1 58 VAL 58 170 170 VAL VAL A . n A 1 59 ILE 59 171 171 ILE ILE A . n A 1 60 VAL 60 172 172 VAL VAL A . n A 1 61 CYS 61 173 173 CYS CYS A . n A 1 62 ASN 62 174 174 ASN ASN A . n A 1 63 THR 63 175 175 THR THR A . n A 1 64 LYS 64 176 176 LYS LYS A . n A 1 65 LEU 65 177 177 LEU LEU A . n A 1 66 ASP 66 178 178 ASP ASP A . n A 1 67 ASN 67 179 179 ASN ASN A . n A 1 68 ASN 68 180 180 ASN ASN A . n A 1 69 TRP 69 181 181 TRP TRP A . n A 1 70 GLY 70 182 182 GLY GLY A . n A 1 71 ARG 71 183 183 ARG ARG A . n A 1 72 GLU 72 184 184 GLU GLU A . n A 1 73 GLU 73 185 185 GLU GLU A . n A 1 74 ARG 74 186 186 ARG ARG A . n A 1 75 GLN 75 187 187 GLN GLN A . n A 1 76 SER 76 188 188 SER SER A . n A 1 77 VAL 77 189 189 VAL VAL A . n A 1 78 PHE 78 190 190 PHE PHE A . n A 1 79 PRO 79 191 191 PRO PRO A . n A 1 80 PHE 80 192 192 PHE PHE A . n A 1 81 GLU 81 193 193 GLU GLU A . n A 1 82 SER 82 194 194 SER SER A . n A 1 83 GLY 83 195 195 GLY GLY A . n A 1 84 LYS 84 196 196 LYS LYS A . n A 1 85 PRO 85 197 197 PRO PRO A . n A 1 86 PHE 86 198 198 PHE PHE A . n A 1 87 LYS 87 199 199 LYS LYS A . n A 1 88 ILE 88 200 200 ILE ILE A . n A 1 89 GLN 89 201 201 GLN GLN A . n A 1 90 VAL 90 202 202 VAL VAL A . n A 1 91 LEU 91 203 203 LEU LEU A . n A 1 92 VAL 92 204 204 VAL VAL A . n A 1 93 GLU 93 205 205 GLU GLU A . n A 1 94 PRO 94 206 206 PRO PRO A . n A 1 95 ASP 95 207 207 ASP ASP A . n A 1 96 HIS 96 208 208 HIS HIS A . n A 1 97 PHE 97 209 209 PHE PHE A . n A 1 98 LYS 98 210 210 LYS LYS A . n A 1 99 VAL 99 211 211 VAL VAL A . n A 1 100 ALA 100 212 212 ALA ALA A . n A 1 101 VAL 101 213 213 VAL VAL A . n A 1 102 ASN 102 214 214 ASN ASN A . n A 1 103 ASP 103 215 215 ASP ASP A . n A 1 104 ALA 104 216 216 ALA ALA A . n A 1 105 HIS 105 217 217 HIS HIS A . n A 1 106 LEU 106 218 218 LEU LEU A . n A 1 107 LEU 107 219 219 LEU LEU A . n A 1 108 GLN 108 220 220 GLN GLN A . n A 1 109 TYR 109 221 221 TYR TYR A . n A 1 110 ASN 110 222 222 ASN ASN A . n A 1 111 HIS 111 223 223 HIS HIS A . n A 1 112 ARG 112 224 224 ARG ARG A . n A 1 113 VAL 113 225 225 VAL VAL A . n A 1 114 LYS 114 226 226 LYS LYS A . n A 1 115 LYS 115 227 227 LYS LYS A . n A 1 116 LEU 116 228 228 LEU LEU A . n A 1 117 ASN 117 229 229 ASN ASN A . n A 1 118 GLU 118 230 230 GLU GLU A . n A 1 119 ILE 119 231 231 ILE ILE A . n A 1 120 SER 120 232 232 SER SER A . n A 1 121 LYS 121 233 233 LYS LYS A . n A 1 122 LEU 122 234 234 LEU LEU A . n A 1 123 GLY 123 235 235 GLY GLY A . n A 1 124 ILE 124 236 236 ILE ILE A . n A 1 125 SER 125 237 237 SER SER A . n A 1 126 GLY 126 238 238 GLY GLY A . n A 1 127 ASP 127 239 239 ASP ASP A . n A 1 128 ILE 128 240 240 ILE ILE A . n A 1 129 ASP 129 241 241 ASP ASP A . n A 1 130 LEU 130 242 242 LEU LEU A . n A 1 131 THR 131 243 243 THR THR A . n A 1 132 SER 132 244 244 SER SER A . n A 1 133 ALA 133 245 245 ALA ALA A . n A 1 134 SER 134 246 246 SER SER A . n A 1 135 TYR 135 247 247 TYR TYR A . n A 1 136 THR 136 248 248 THR THR A . n A 1 137 MET 137 249 249 MET MET A . n A 1 138 ILE 138 250 250 ILE ILE A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GOL 1 401 401 GOL GOL A . D 4 CL 1 402 1 CL CL A . E 5 HOH 1 501 182 HOH HOH A . E 5 HOH 2 502 111 HOH HOH A . E 5 HOH 3 503 146 HOH HOH A . E 5 HOH 4 504 64 HOH HOH A . E 5 HOH 5 505 110 HOH HOH A . E 5 HOH 6 506 44 HOH HOH A . E 5 HOH 7 507 85 HOH HOH A . E 5 HOH 8 508 23 HOH HOH A . E 5 HOH 9 509 133 HOH HOH A . E 5 HOH 10 510 215 HOH HOH A . E 5 HOH 11 511 216 HOH HOH A . E 5 HOH 12 512 170 HOH HOH A . E 5 HOH 13 513 151 HOH HOH A . E 5 HOH 14 514 31 HOH HOH A . E 5 HOH 15 515 195 HOH HOH A . E 5 HOH 16 516 38 HOH HOH A . E 5 HOH 17 517 77 HOH HOH A . E 5 HOH 18 518 164 HOH HOH A . E 5 HOH 19 519 7 HOH HOH A . E 5 HOH 20 520 67 HOH HOH A . E 5 HOH 21 521 62 HOH HOH A . E 5 HOH 22 522 57 HOH HOH A . E 5 HOH 23 523 45 HOH HOH A . E 5 HOH 24 524 93 HOH HOH A . E 5 HOH 25 525 150 HOH HOH A . E 5 HOH 26 526 113 HOH HOH A . E 5 HOH 27 527 119 HOH HOH A . E 5 HOH 28 528 20 HOH HOH A . E 5 HOH 29 529 9 HOH HOH A . E 5 HOH 30 530 86 HOH HOH A . E 5 HOH 31 531 78 HOH HOH A . E 5 HOH 32 532 25 HOH HOH A . E 5 HOH 33 533 120 HOH HOH A . E 5 HOH 34 534 100 HOH HOH A . E 5 HOH 35 535 24 HOH HOH A . E 5 HOH 36 536 147 HOH HOH A . E 5 HOH 37 537 106 HOH HOH A . E 5 HOH 38 538 180 HOH HOH A . E 5 HOH 39 539 27 HOH HOH A . E 5 HOH 40 540 46 HOH HOH A . E 5 HOH 41 541 205 HOH HOH A . E 5 HOH 42 542 35 HOH HOH A . E 5 HOH 43 543 173 HOH HOH A . E 5 HOH 44 544 55 HOH HOH A . E 5 HOH 45 545 101 HOH HOH A . E 5 HOH 46 546 50 HOH HOH A . E 5 HOH 47 547 12 HOH HOH A . E 5 HOH 48 548 171 HOH HOH A . E 5 HOH 49 549 198 HOH HOH A . E 5 HOH 50 550 135 HOH HOH A . E 5 HOH 51 551 3 HOH HOH A . E 5 HOH 52 552 21 HOH HOH A . E 5 HOH 53 553 79 HOH HOH A . E 5 HOH 54 554 96 HOH HOH A . E 5 HOH 55 555 33 HOH HOH A . E 5 HOH 56 556 141 HOH HOH A . E 5 HOH 57 557 162 HOH HOH A . E 5 HOH 58 558 63 HOH HOH A . E 5 HOH 59 559 174 HOH HOH A . E 5 HOH 60 560 26 HOH HOH A . E 5 HOH 61 561 59 HOH HOH A . E 5 HOH 62 562 29 HOH HOH A . E 5 HOH 63 563 87 HOH HOH A . E 5 HOH 64 564 97 HOH HOH A . E 5 HOH 65 565 94 HOH HOH A . E 5 HOH 66 566 129 HOH HOH A . E 5 HOH 67 567 123 HOH HOH A . E 5 HOH 68 568 128 HOH HOH A . E 5 HOH 69 569 199 HOH HOH A . E 5 HOH 70 570 10 HOH HOH A . E 5 HOH 71 571 43 HOH HOH A . E 5 HOH 72 572 209 HOH HOH A . E 5 HOH 73 573 68 HOH HOH A . E 5 HOH 74 574 41 HOH HOH A . E 5 HOH 75 575 183 HOH HOH A . E 5 HOH 76 576 39 HOH HOH A . E 5 HOH 77 577 157 HOH HOH A . E 5 HOH 78 578 202 HOH HOH A . E 5 HOH 79 579 15 HOH HOH A . E 5 HOH 80 580 42 HOH HOH A . E 5 HOH 81 581 2 HOH HOH A . E 5 HOH 82 582 14 HOH HOH A . E 5 HOH 83 583 187 HOH HOH A . E 5 HOH 84 584 154 HOH HOH A . E 5 HOH 85 585 127 HOH HOH A . E 5 HOH 86 586 117 HOH HOH A . E 5 HOH 87 587 167 HOH HOH A . E 5 HOH 88 588 58 HOH HOH A . E 5 HOH 89 589 179 HOH HOH A . E 5 HOH 90 590 126 HOH HOH A . E 5 HOH 91 591 188 HOH HOH A . E 5 HOH 92 592 99 HOH HOH A . E 5 HOH 93 593 40 HOH HOH A . E 5 HOH 94 594 89 HOH HOH A . E 5 HOH 95 595 34 HOH HOH A . E 5 HOH 96 596 142 HOH HOH A . E 5 HOH 97 597 115 HOH HOH A . E 5 HOH 98 598 90 HOH HOH A . E 5 HOH 99 599 118 HOH HOH A . E 5 HOH 100 600 54 HOH HOH A . E 5 HOH 101 601 4 HOH HOH A . E 5 HOH 102 602 56 HOH HOH A . E 5 HOH 103 603 186 HOH HOH A . E 5 HOH 104 604 83 HOH HOH A . E 5 HOH 105 605 136 HOH HOH A . E 5 HOH 106 606 161 HOH HOH A . E 5 HOH 107 607 17 HOH HOH A . E 5 HOH 108 608 134 HOH HOH A . E 5 HOH 109 609 16 HOH HOH A . E 5 HOH 110 610 121 HOH HOH A . E 5 HOH 111 611 30 HOH HOH A . E 5 HOH 112 612 81 HOH HOH A . E 5 HOH 113 613 109 HOH HOH A . E 5 HOH 114 614 72 HOH HOH A . E 5 HOH 115 615 60 HOH HOH A . E 5 HOH 116 616 76 HOH HOH A . E 5 HOH 117 617 71 HOH HOH A . E 5 HOH 118 618 6 HOH HOH A . E 5 HOH 119 619 73 HOH HOH A . E 5 HOH 120 620 194 HOH HOH A . E 5 HOH 121 621 13 HOH HOH A . E 5 HOH 122 622 122 HOH HOH A . E 5 HOH 123 623 114 HOH HOH A . E 5 HOH 124 624 22 HOH HOH A . E 5 HOH 125 625 200 HOH HOH A . E 5 HOH 126 626 217 HOH HOH A . E 5 HOH 127 627 165 HOH HOH A . E 5 HOH 128 628 75 HOH HOH A . E 5 HOH 129 629 103 HOH HOH A . E 5 HOH 130 630 210 HOH HOH A . E 5 HOH 131 631 95 HOH HOH A . E 5 HOH 132 632 88 HOH HOH A . E 5 HOH 133 633 213 HOH HOH A . E 5 HOH 134 634 102 HOH HOH A . E 5 HOH 135 635 214 HOH HOH A . E 5 HOH 136 636 149 HOH HOH A . E 5 HOH 137 637 159 HOH HOH A . E 5 HOH 138 638 140 HOH HOH A . E 5 HOH 139 639 125 HOH HOH A . E 5 HOH 140 640 189 HOH HOH A . E 5 HOH 141 641 178 HOH HOH A . E 5 HOH 142 642 47 HOH HOH A . E 5 HOH 143 643 193 HOH HOH A . E 5 HOH 144 644 212 HOH HOH A . E 5 HOH 145 645 105 HOH HOH A . E 5 HOH 146 646 116 HOH HOH A . E 5 HOH 147 647 145 HOH HOH A . E 5 HOH 148 648 191 HOH HOH A . E 5 HOH 149 649 181 HOH HOH A . E 5 HOH 150 650 148 HOH HOH A . E 5 HOH 151 651 130 HOH HOH A . E 5 HOH 152 652 144 HOH HOH A . E 5 HOH 153 653 138 HOH HOH A . E 5 HOH 154 654 66 HOH HOH A . E 5 HOH 155 655 175 HOH HOH A . E 5 HOH 156 656 5 HOH HOH A . E 5 HOH 157 657 208 HOH HOH A . E 5 HOH 158 658 65 HOH HOH A . E 5 HOH 159 659 203 HOH HOH A . E 5 HOH 160 660 104 HOH HOH A . E 5 HOH 161 661 49 HOH HOH A . E 5 HOH 162 662 201 HOH HOH A . E 5 HOH 163 663 197 HOH HOH A . E 5 HOH 164 664 124 HOH HOH A . E 5 HOH 165 665 169 HOH HOH A . E 5 HOH 166 666 207 HOH HOH A . E 5 HOH 167 667 53 HOH HOH A . E 5 HOH 168 668 143 HOH HOH A . E 5 HOH 169 669 155 HOH HOH A . E 5 HOH 170 670 132 HOH HOH A . E 5 HOH 171 671 112 HOH HOH A . E 5 HOH 172 672 172 HOH HOH A . E 5 HOH 173 673 137 HOH HOH A . E 5 HOH 174 674 163 HOH HOH A . E 5 HOH 175 675 166 HOH HOH A . E 5 HOH 176 676 80 HOH HOH A . E 5 HOH 177 677 107 HOH HOH A . E 5 HOH 178 678 108 HOH HOH A . E 5 HOH 179 679 91 HOH HOH A . E 5 HOH 180 680 176 HOH HOH A . E 5 HOH 181 681 61 HOH HOH A . E 5 HOH 182 682 168 HOH HOH A . E 5 HOH 183 683 98 HOH HOH A . E 5 HOH 184 684 156 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 980 ? 1 MORE -2 ? 1 'SSA (A^2)' 7370 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-04-21 2 'Structure model' 1 1 2021-06-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.title' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -13.0710315217 _pdbx_refine_tls.origin_y -0.442037319623 _pdbx_refine_tls.origin_z 6.0469279358 _pdbx_refine_tls.T[1][1] 0.102867986931 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] -0.00378149785688 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] 0.0113997607591 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 0.116035051729 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] -0.00901477127024 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] 0.114482892072 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 0.335021914232 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] 0.0305726032977 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] 0.126985630357 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 0.908349037286 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] 0.572078581595 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 0.911688172798 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] 0.00310851559237 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] -0.00108012030283 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] 0.037020620554 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] -0.0184041748263 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] 0.00881413747384 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] -0.00453216218243 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] -0.0251138787284 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] -0.0233404176946 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] 0.00189020369365 _pdbx_refine_tls.S[3][3]_esd ? # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_PDB_ins_code ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_PDB_ins_code ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.17.1_3660 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.17.1_3660 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _pdbx_entry_details.entry_id 7BE3 _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 OE1 A GLU 193 ? B 1_555 O A HOH 549 ? ? 2_455 1.99 2 1 NH1 A ARG 183 ? ? 1_555 O A HOH 588 ? ? 1_455 2.06 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 129 ? ? 85.75 1.21 2 1 ARG A 129 ? ? 87.75 -1.35 3 1 ASN A 164 ? ? -154.93 76.87 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 682 ? 5.82 . 2 1 O ? A HOH 683 ? 6.25 . 3 1 O ? A HOH 684 ? 6.70 . # _pdbx_audit_support.funding_organization 'Foundation for Science and Technology (FCT)' _pdbx_audit_support.country Portugal _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NDG 1 C NDG 1 A LDA 301 n B 2 NGA 2 C NGA 2 A LDA 301 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NDG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAca NDG 'COMMON NAME' GMML 1.0 N-acetyl-a-D-glucopyranosamine NDG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-GlcpNAc NDG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc NGA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpNAcb NGA 'COMMON NAME' GMML 1.0 N-acetyl-b-D-galactopyranosamine NGA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GalpNAc NGA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GalNAc # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGalpNAcb1-4DGlcpNAca1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 '[][a-D-GlcpNAc]{[(4+1)][b-D-GalpNAc]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 NGA _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 NDG _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NDG 1 n 2 NGA 2 n # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 NGA ? ? NGA ? ? 'SUBJECT OF INVESTIGATION' ? 2 NDG ? ? NDG ? ? 'SUBJECT OF INVESTIGATION' ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 GLYCEROL GOL 4 'CHLORIDE ION' CL 5 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'isothermal titration calorimetry' _pdbx_struct_assembly_auth_evidence.details ? # _space_group.name_H-M_alt 'P 21 21 21' _space_group.name_Hall 'P 2ac 2ab' _space_group.IT_number 19 _space_group.crystal_system orthorhombic _space_group.id 1 # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 x+1/2,-y+1/2,-z 3 -x,y+1/2,-z+1/2 4 -x+1/2,-y,z+1/2 #