HEADER VIRAL PROTEIN/IMMUNE SYSTEM 23-DEC-20 7BEI TITLE CRYSTAL STRUCTURE OF THE RECEPTOR BINDING DOMAIN OF SARS-COV-2 SPIKE TITLE 2 GLYCOPROTEIN IN COMPLEX WITH COVOX-150 FAB COMPND MOL_ID: 1; COMPND 2 MOLECULE: COVOX-150 HEAVY CHAIN; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: COVOX-150 LIGHT CHAIN; COMPND 7 CHAIN: L; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: SPIKE GLYCOPROTEIN; COMPND 11 CHAIN: E; COMPND 12 SYNONYM: S GLYCOPROTEIN,E2,PEPLOMER PROTEIN; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 8 ORGANISM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 11 MOL_ID: 3; SOURCE 12 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 13 2; SOURCE 14 ORGANISM_COMMON: 2019-NCOV; SOURCE 15 ORGANISM_TAXID: 2697049; SOURCE 16 GENE: S, 2; SOURCE 17 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS SARS-COV-2, ANTIBODY, GERMLINE, V-GENE, RECEPTOR-BINDING-DOMAIN, KEYWDS 2 SPIKE, NEUTRALISATION, PROTECTION, GLYCOSYLATION, VALENCY, VIRAL KEYWDS 3 PROTEIN/IMMUNE SYSTEM, VIRAL PROTEIN, IMMUNE SYSTEM, VIRAL PROTEIN- KEYWDS 4 IMMUNE SYSTEM COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.ZHOU,Y.ZHAO,J.REN,D.STUART REVDAT 5 16-OCT-24 7BEI 1 REMARK REVDAT 4 31-JAN-24 7BEI 1 REMARK REVDAT 3 28-APR-21 7BEI 1 JRNL REVDAT 2 07-APR-21 7BEI 1 JRNL REVDAT 1 03-MAR-21 7BEI 0 JRNL AUTH W.DEJNIRATTISAI,D.ZHOU,H.M.GINN,H.M.E.DUYVESTEYN,P.SUPASA, JRNL AUTH 2 J.B.CASE,Y.ZHAO,T.S.WALTER,A.J.MENTZER,C.LIU,B.WANG, JRNL AUTH 3 G.C.PAESEN,J.SLON-CAMPOS,C.LOPEZ-CAMACHO,N.M.KAFAI, JRNL AUTH 4 A.L.BAILEY,R.E.CHEN,B.YING,C.THOMPSON,J.BOLTON,A.FYFE, JRNL AUTH 5 S.GUPTA,T.K.TAN,J.GILBERT-JARAMILLO,W.JAMES,M.KNIGHT, JRNL AUTH 6 M.W.CARROLL,D.SKELLY,C.DOLD,Y.PENG,R.LEVIN,T.DONG, JRNL AUTH 7 A.J.POLLARD,J.C.KNIGHT,P.KLENERMAN,N.TEMPERTON,D.R.HALL, JRNL AUTH 8 M.A.WILLIAMS,N.G.PATERSON,F.K.R.BERTRAM,C.A.SIEBERT, JRNL AUTH 9 D.K.CLARE,A.HOWE,J.RADECKE,Y.SONG,A.R.TOWNSEND,K.A.HUANG, JRNL AUTH10 E.E.FRY,J.MONGKOLSAPAYA,M.S.DIAMOND,J.REN,D.I.STUART, JRNL AUTH11 G.R.SCREATON JRNL TITL THE ANTIGENIC ANATOMY OF SARS-COV-2 RECEPTOR BINDING DOMAIN. JRNL REF CELL V. 184 2183 2021 JRNL REFN ISSN 1097-4172 JRNL PMID 33756110 JRNL DOI 10.1016/J.CELL.2021.02.032 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.1_3865 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.75 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 80.9 REMARK 3 NUMBER OF REFLECTIONS : 32366 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.840 REMARK 3 FREE R VALUE TEST SET COUNT : 1567 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.7500 - 5.1200 1.00 3653 158 0.1615 0.2006 REMARK 3 2 5.1200 - 4.0600 1.00 3494 200 0.1337 0.1745 REMARK 3 3 4.0600 - 3.5500 1.00 3461 187 0.1675 0.2294 REMARK 3 4 3.5500 - 3.2300 1.00 3491 161 0.1920 0.2650 REMARK 3 5 3.2300 - 2.9900 1.00 3425 191 0.2152 0.2564 REMARK 3 6 2.9900 - 2.8200 1.00 3410 182 0.2216 0.2856 REMARK 3 7 2.8200 - 2.6800 0.90 3076 140 0.2428 0.2786 REMARK 3 8 2.6800 - 2.5600 0.72 2459 127 0.2647 0.3271 REMARK 3 9 2.5600 - 2.4600 0.58 1983 94 0.2920 0.3045 REMARK 3 10 2.4600 - 2.3800 0.42 1415 85 0.3041 0.3563 REMARK 3 11 2.3800 - 2.3000 0.27 932 42 0.2904 0.3191 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.339 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.836 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 44.59 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.13 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 4938 REMARK 3 ANGLE : 0.725 6719 REMARK 3 CHIRALITY : 0.047 759 REMARK 3 PLANARITY : 0.005 861 REMARK 3 DIHEDRAL : 15.560 1761 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 19 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 460 THROUGH 479 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.4038 -52.8686 9.1810 REMARK 3 T TENSOR REMARK 3 T11: 0.3901 T22: 0.5491 REMARK 3 T33: 0.5657 T12: -0.1096 REMARK 3 T13: -0.0241 T23: 0.1377 REMARK 3 L TENSOR REMARK 3 L11: 1.9689 L22: 4.0689 REMARK 3 L33: 5.3437 L12: -0.9633 REMARK 3 L13: 2.1959 L23: -1.9355 REMARK 3 S TENSOR REMARK 3 S11: 0.2161 S12: -0.3177 S13: -0.2920 REMARK 3 S21: -0.3544 S22: 0.6463 S23: 1.0739 REMARK 3 S31: 0.6174 S32: -1.3261 S33: -0.9182 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 480 THROUGH 527 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.0449 -59.4840 8.0511 REMARK 3 T TENSOR REMARK 3 T11: 0.4518 T22: 0.3313 REMARK 3 T33: 0.3960 T12: -0.0818 REMARK 3 T13: -0.0442 T23: 0.0093 REMARK 3 L TENSOR REMARK 3 L11: 1.9459 L22: 2.5740 REMARK 3 L33: 2.5440 L12: 0.0152 REMARK 3 L13: -0.2771 L23: -0.6175 REMARK 3 S TENSOR REMARK 3 S11: 0.0558 S12: -0.0848 S13: 0.2498 REMARK 3 S21: -0.7436 S22: 0.0785 S23: 0.1496 REMARK 3 S31: 0.5760 S32: -0.0491 S33: -0.1422 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 1 THROUGH 39 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.1361 -28.1821 3.6359 REMARK 3 T TENSOR REMARK 3 T11: 0.2901 T22: 0.4046 REMARK 3 T33: 0.4711 T12: -0.0319 REMARK 3 T13: 0.0435 T23: 0.0420 REMARK 3 L TENSOR REMARK 3 L11: 0.8674 L22: 5.6101 REMARK 3 L33: 2.0314 L12: 0.1424 REMARK 3 L13: -0.3925 L23: -1.6893 REMARK 3 S TENSOR REMARK 3 S11: 0.0549 S12: -0.1713 S13: -0.0136 REMARK 3 S21: 0.0392 S22: 0.1872 S23: 0.8298 REMARK 3 S31: 0.1626 S32: -0.5870 S33: -0.2661 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 40 THROUGH 113 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.7041 -31.6255 4.4287 REMARK 3 T TENSOR REMARK 3 T11: 0.2165 T22: 0.3152 REMARK 3 T33: 0.3454 T12: -0.0373 REMARK 3 T13: 0.0678 T23: 0.0036 REMARK 3 L TENSOR REMARK 3 L11: 0.2683 L22: 5.3637 REMARK 3 L33: 2.1520 L12: 0.9283 REMARK 3 L13: 0.3314 L23: -1.2586 REMARK 3 S TENSOR REMARK 3 S11: -0.0265 S12: -0.1237 S13: -0.0548 REMARK 3 S21: -0.0196 S22: 0.1115 S23: 0.2808 REMARK 3 S31: -0.0453 S32: -0.1766 S33: -0.0516 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 114 THROUGH 179 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.6274 -4.6349 -14.6362 REMARK 3 T TENSOR REMARK 3 T11: 0.2423 T22: 0.3184 REMARK 3 T33: 0.2486 T12: 0.0049 REMARK 3 T13: -0.0216 T23: -0.0350 REMARK 3 L TENSOR REMARK 3 L11: 0.8736 L22: 3.0224 REMARK 3 L33: 3.8371 L12: -0.3008 REMARK 3 L13: 0.6459 L23: -0.2361 REMARK 3 S TENSOR REMARK 3 S11: 0.0317 S12: 0.0839 S13: -0.0449 REMARK 3 S21: -0.2810 S22: -0.1008 S23: 0.0076 REMARK 3 S31: -0.0568 S32: -0.1885 S33: 0.0306 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 180 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.9697 2.1300 -20.3961 REMARK 3 T TENSOR REMARK 3 T11: 0.4011 T22: 0.3302 REMARK 3 T33: 0.3454 T12: 0.0485 REMARK 3 T13: -0.0517 T23: -0.0046 REMARK 3 L TENSOR REMARK 3 L11: 2.2858 L22: 1.3017 REMARK 3 L33: 1.7577 L12: 0.3265 REMARK 3 L13: 1.9030 L23: 0.8476 REMARK 3 S TENSOR REMARK 3 S11: -0.1037 S12: 0.0558 S13: 0.4565 REMARK 3 S21: -0.1394 S22: 0.0483 S23: 0.1389 REMARK 3 S31: -0.4427 S32: -0.3631 S33: 0.1720 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 1 THROUGH 18 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.4642 -37.7115 -20.5695 REMARK 3 T TENSOR REMARK 3 T11: 0.7902 T22: 0.3912 REMARK 3 T33: 0.3615 T12: -0.0137 REMARK 3 T13: 0.0423 T23: -0.0476 REMARK 3 L TENSOR REMARK 3 L11: 2.1338 L22: 3.8550 REMARK 3 L33: 4.4228 L12: -0.5720 REMARK 3 L13: -0.2715 L23: -3.2418 REMARK 3 S TENSOR REMARK 3 S11: -0.1114 S12: 0.3686 S13: -0.2359 REMARK 3 S21: -0.5120 S22: -0.0645 S23: -0.1092 REMARK 3 S31: 0.2953 S32: 0.2708 S33: 0.2591 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 19 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.0521 -42.5575 -15.3245 REMARK 3 T TENSOR REMARK 3 T11: 0.7280 T22: 0.3387 REMARK 3 T33: 0.3978 T12: -0.1291 REMARK 3 T13: -0.0523 T23: -0.0315 REMARK 3 L TENSOR REMARK 3 L11: 1.4734 L22: 2.7955 REMARK 3 L33: 4.0888 L12: -0.1773 REMARK 3 L13: -0.4040 L23: -2.0071 REMARK 3 S TENSOR REMARK 3 S11: -0.1625 S12: 0.2466 S13: -0.3089 REMARK 3 S21: -0.9732 S22: 0.1571 S23: 0.3122 REMARK 3 S31: 0.6597 S32: -0.0079 S33: 0.0417 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 76 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.4172 -35.3478 -20.0731 REMARK 3 T TENSOR REMARK 3 T11: 0.7550 T22: 0.3979 REMARK 3 T33: 0.3972 T12: -0.1708 REMARK 3 T13: -0.0921 T23: 0.0010 REMARK 3 L TENSOR REMARK 3 L11: 1.2877 L22: 2.5906 REMARK 3 L33: 1.9449 L12: -0.0975 REMARK 3 L13: -0.9084 L23: -1.7159 REMARK 3 S TENSOR REMARK 3 S11: -0.1920 S12: 0.2655 S13: -0.3462 REMARK 3 S21: -0.7668 S22: 0.3667 S23: 0.7206 REMARK 3 S31: 0.1353 S32: -0.4240 S33: -0.0575 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 91 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.3543 -40.4937 -4.0426 REMARK 3 T TENSOR REMARK 3 T11: 0.5399 T22: 0.3792 REMARK 3 T33: 0.4194 T12: -0.0530 REMARK 3 T13: -0.0247 T23: 0.0208 REMARK 3 L TENSOR REMARK 3 L11: 0.2133 L22: 2.5460 REMARK 3 L33: 2.9941 L12: -0.3609 REMARK 3 L13: -0.0164 L23: -2.0580 REMARK 3 S TENSOR REMARK 3 S11: -0.3232 S12: -0.1441 S13: 0.1411 REMARK 3 S21: -0.0582 S22: 0.3318 S23: -0.0414 REMARK 3 S31: 0.1626 S32: -0.3716 S33: 0.2105 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 105 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.7254 -24.6357 -30.8911 REMARK 3 T TENSOR REMARK 3 T11: 0.7331 T22: 0.4128 REMARK 3 T33: 0.3034 T12: -0.0323 REMARK 3 T13: -0.0702 T23: -0.0431 REMARK 3 L TENSOR REMARK 3 L11: 0.2710 L22: 2.3456 REMARK 3 L33: 2.1217 L12: 0.7450 REMARK 3 L13: -0.5879 L23: -2.2039 REMARK 3 S TENSOR REMARK 3 S11: 0.0269 S12: -0.1416 S13: -0.4335 REMARK 3 S21: -0.5487 S22: -0.1454 S23: -0.2505 REMARK 3 S31: 0.2871 S32: -0.3385 S33: 0.0512 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 116 THROUGH 146 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.5914 -7.0381 -21.5595 REMARK 3 T TENSOR REMARK 3 T11: 0.2630 T22: 0.2960 REMARK 3 T33: 0.2134 T12: 0.0314 REMARK 3 T13: 0.0261 T23: 0.0021 REMARK 3 L TENSOR REMARK 3 L11: 4.1874 L22: 3.8156 REMARK 3 L33: 2.9699 L12: 0.8644 REMARK 3 L13: 0.4217 L23: -1.3812 REMARK 3 S TENSOR REMARK 3 S11: 0.1530 S12: -0.0602 S13: 0.1032 REMARK 3 S21: -0.1718 S22: -0.0058 S23: -0.0215 REMARK 3 S31: 0.2795 S32: -0.1222 S33: -0.1427 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 147 THROUGH 157 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.7489 -12.3927 -20.8489 REMARK 3 T TENSOR REMARK 3 T11: 0.4074 T22: 0.4363 REMARK 3 T33: 0.4002 T12: 0.0370 REMARK 3 T13: 0.0470 T23: 0.0088 REMARK 3 L TENSOR REMARK 3 L11: 6.5112 L22: 2.3028 REMARK 3 L33: 2.7794 L12: 1.2161 REMARK 3 L13: 0.6606 L23: -1.7018 REMARK 3 S TENSOR REMARK 3 S11: -0.0645 S12: 0.5750 S13: -0.5624 REMARK 3 S21: 0.3599 S22: -0.2292 S23: -0.7658 REMARK 3 S31: 0.8432 S32: 0.6565 S33: 0.1395 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 158 THROUGH 176 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.6273 -16.9200 -22.3737 REMARK 3 T TENSOR REMARK 3 T11: 0.4552 T22: 0.2890 REMARK 3 T33: 0.2797 T12: 0.0114 REMARK 3 T13: -0.0209 T23: 0.0123 REMARK 3 L TENSOR REMARK 3 L11: 4.6679 L22: 2.1883 REMARK 3 L33: 3.7322 L12: 1.8200 REMARK 3 L13: 1.6962 L23: 0.8233 REMARK 3 S TENSOR REMARK 3 S11: 0.3019 S12: -0.0674 S13: -0.1701 REMARK 3 S21: -0.2082 S22: -0.2480 S23: 0.0754 REMARK 3 S31: 0.6892 S32: -0.0963 S33: -0.0093 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 177 THROUGH 199 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.9280 -5.6753 -17.8438 REMARK 3 T TENSOR REMARK 3 T11: 0.3297 T22: 0.3430 REMARK 3 T33: 0.3513 T12: 0.0510 REMARK 3 T13: 0.0489 T23: 0.0895 REMARK 3 L TENSOR REMARK 3 L11: 3.8926 L22: 3.5222 REMARK 3 L33: 3.4481 L12: 1.4077 REMARK 3 L13: 0.5760 L23: 0.9450 REMARK 3 S TENSOR REMARK 3 S11: 0.2565 S12: -0.1338 S13: 0.0246 REMARK 3 S21: 0.0141 S22: -0.2418 S23: -0.6159 REMARK 3 S31: 0.1241 S32: 0.4884 S33: -0.0772 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 200 THROUGH 215 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.3330 -9.7003 -29.4228 REMARK 3 T TENSOR REMARK 3 T11: 0.4029 T22: 0.4962 REMARK 3 T33: 0.3949 T12: 0.0342 REMARK 3 T13: 0.1214 T23: 0.0082 REMARK 3 L TENSOR REMARK 3 L11: 4.2918 L22: 4.7804 REMARK 3 L33: 3.9432 L12: 1.7674 REMARK 3 L13: 1.1041 L23: 1.3991 REMARK 3 S TENSOR REMARK 3 S11: -0.1085 S12: 0.5783 S13: -0.2595 REMARK 3 S21: -0.7467 S22: 0.2781 S23: -0.9446 REMARK 3 S31: 0.0837 S32: 0.7602 S33: -0.0896 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 334 THROUGH 364 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.8252 -72.0878 14.8282 REMARK 3 T TENSOR REMARK 3 T11: 0.5307 T22: 0.3551 REMARK 3 T33: 0.5419 T12: -0.0716 REMARK 3 T13: 0.0108 T23: 0.0279 REMARK 3 L TENSOR REMARK 3 L11: 4.1003 L22: 7.6446 REMARK 3 L33: 7.7053 L12: -3.7321 REMARK 3 L13: 1.1210 L23: -3.9100 REMARK 3 S TENSOR REMARK 3 S11: 0.0705 S12: -0.0597 S13: -0.6601 REMARK 3 S21: -1.1593 S22: 0.0328 S23: -0.2108 REMARK 3 S31: 1.5043 S32: -0.0926 S33: -0.2954 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 365 THROUGH 393 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.2653 -66.2576 22.1872 REMARK 3 T TENSOR REMARK 3 T11: 0.5356 T22: 0.8935 REMARK 3 T33: 0.6999 T12: 0.0773 REMARK 3 T13: 0.0260 T23: 0.1912 REMARK 3 L TENSOR REMARK 3 L11: 0.9823 L22: 3.4124 REMARK 3 L33: 6.5783 L12: 1.4973 REMARK 3 L13: -1.5154 L23: -4.5880 REMARK 3 S TENSOR REMARK 3 S11: 0.2455 S12: -0.8000 S13: -0.0830 REMARK 3 S21: -0.0048 S22: -0.7924 S23: -1.1690 REMARK 3 S31: 0.4446 S32: 2.0711 S33: 0.6760 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 394 THROUGH 459 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.0681 -57.7830 9.0482 REMARK 3 T TENSOR REMARK 3 T11: 0.2966 T22: 0.2504 REMARK 3 T33: 0.2950 T12: -0.0426 REMARK 3 T13: 0.0144 T23: 0.0146 REMARK 3 L TENSOR REMARK 3 L11: 3.6909 L22: 4.1279 REMARK 3 L33: 3.1901 L12: -0.9536 REMARK 3 L13: -0.2053 L23: -1.8454 REMARK 3 S TENSOR REMARK 3 S11: 0.0031 S12: -0.0329 S13: -0.0673 REMARK 3 S21: -0.4537 S22: 0.0489 S23: -0.1322 REMARK 3 S31: 0.4689 S32: -0.0468 S33: -0.0479 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7BEI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-DEC-20. REMARK 100 THE DEPOSITION ID IS D_1292113124. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-NOV-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33837 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 52.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 84.4 REMARK 200 DATA REDUNDANCY : 22.00 REMARK 200 R MERGE (I) : 0.19200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.99000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 0.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6ZCZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.09 M OF NPS (NITRATE, PHOSPHATE AND REMARK 280 SULPHATE), 0.1 M MES/IMIDAZOLE PH 6.5, 10% (W/V) PEG 8000 AND 20% REMARK 280 (V/V) ETHYLENE GLYCOL, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.75200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 72.75200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 40.70950 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 75.35450 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 40.70950 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 75.35450 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 72.75200 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 40.70950 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 75.35450 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 72.75200 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 40.70950 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 75.35450 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L, E, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH L 465 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE H -12 REMARK 465 LEU H -11 REMARK 465 PHE H -10 REMARK 465 LEU H -9 REMARK 465 VAL H -8 REMARK 465 ALA H -7 REMARK 465 THR H -6 REMARK 465 ALA H -5 REMARK 465 THR H -4 REMARK 465 GLY H -3 REMARK 465 VAL H -2 REMARK 465 HIS H -1 REMARK 465 SER H 0 REMARK 465 SER H 134 REMARK 465 THR H 135 REMARK 465 SER H 136 REMARK 465 GLY H 137 REMARK 465 ASP H 221 REMARK 465 LYS H 222 REMARK 465 ILE L -12 REMARK 465 LEU L -11 REMARK 465 PHE L -10 REMARK 465 LEU L -9 REMARK 465 VAL L -8 REMARK 465 ALA L -7 REMARK 465 THR L -6 REMARK 465 ALA L -5 REMARK 465 THR L -4 REMARK 465 GLY L -3 REMARK 465 VAL L -2 REMARK 465 HIS L -1 REMARK 465 SER L 0 REMARK 465 CYS L 216 REMARK 465 GLU E 324 REMARK 465 THR E 325 REMARK 465 GLY E 326 REMARK 465 HIS E 327 REMARK 465 HIS E 328 REMARK 465 HIS E 329 REMARK 465 HIS E 330 REMARK 465 HIS E 331 REMARK 465 HIS E 332 REMARK 465 THR E 333 REMARK 465 LYS E 528 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS H 133 CG CD CE NZ REMARK 470 LYS E 527 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH L 466 O HOH L 468 1.84 REMARK 500 OH TYR E 508 O HOH E 601 1.93 REMARK 500 O HOH H 683 O HOH L 459 1.95 REMARK 500 O GLU H 88 O HOH H 601 2.05 REMARK 500 O HOH H 677 O HOH H 688 2.05 REMARK 500 O HOH L 454 O HOH L 455 2.07 REMARK 500 O HOH L 418 O HOH L 457 2.08 REMARK 500 O HOH L 431 O HOH L 443 2.10 REMARK 500 O HOH E 627 O HOH E 644 2.12 REMARK 500 O HOH H 651 O HOH H 686 2.12 REMARK 500 O HOH L 426 O HOH L 464 2.13 REMARK 500 OD1 ASP H 98 OH TYR L 98 2.14 REMARK 500 O HOH L 408 O HOH L 417 2.15 REMARK 500 O HOH E 636 O HOH E 642 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU H 182 CA - CB - CG ANGL. DEV. = 15.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN H 76 58.44 37.80 REMARK 500 MET H 100 -111.49 51.23 REMARK 500 ASP H 148 64.73 67.09 REMARK 500 SER L 30 -115.52 50.20 REMARK 500 ALA L 51 -40.90 67.72 REMARK 500 SER L 52 14.93 -143.05 REMARK 500 ASN L 140 71.79 50.49 REMARK 500 VAL E 341 -62.13 -100.70 REMARK 500 PHE E 377 81.93 -158.14 REMARK 500 LYS E 386 30.56 -88.47 REMARK 500 PHE E 400 -176.17 -171.31 REMARK 500 ASN E 422 -57.53 -129.17 REMARK 500 ASP E 428 43.70 -100.07 REMARK 500 HIS E 519 49.93 -84.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7BEH RELATED DB: PDB DBREF 7BEI H -12 222 PDB 7BEI 7BEI -12 222 DBREF 7BEI L -12 216 PDB 7BEI 7BEI -12 216 DBREF 7BEI E 333 528 UNP P0DTC2 SPIKE_SARS2 333 528 SEQADV 7BEI GLU E 324 UNP P0DTC2 EXPRESSION TAG SEQADV 7BEI THR E 325 UNP P0DTC2 EXPRESSION TAG SEQADV 7BEI GLY E 326 UNP P0DTC2 EXPRESSION TAG SEQADV 7BEI HIS E 327 UNP P0DTC2 EXPRESSION TAG SEQADV 7BEI HIS E 328 UNP P0DTC2 EXPRESSION TAG SEQADV 7BEI HIS E 329 UNP P0DTC2 EXPRESSION TAG SEQADV 7BEI HIS E 330 UNP P0DTC2 EXPRESSION TAG SEQADV 7BEI HIS E 331 UNP P0DTC2 EXPRESSION TAG SEQADV 7BEI HIS E 332 UNP P0DTC2 EXPRESSION TAG SEQADV 7BEI LYS E 527 UNP P0DTC2 PRO 527 ENGINEERED MUTATION SEQRES 1 H 235 ILE LEU PHE LEU VAL ALA THR ALA THR GLY VAL HIS SER SEQRES 2 H 235 GLN VAL GLN LEU VAL GLU SER GLY GLY GLY LEU ILE GLN SEQRES 3 H 235 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 4 H 235 VAL THR VAL SER SER ASN TYR MET SER TRP VAL ARG GLN SEQRES 5 H 235 ALA PRO GLY LYS GLY LEU GLU TRP VAL SER ILE ILE TYR SEQRES 6 H 235 SER GLY GLY THR THR TYR TYR ALA ASP SER VAL LYS GLY SEQRES 7 H 235 ARG PHE THR ILE SER ARG ASP SER SER MET ASN THR LEU SEQRES 8 H 235 TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR ALA SEQRES 9 H 235 VAL TYR TYR CYS ALA ARG ASP LEU MET VAL TYR GLY ILE SEQRES 10 H 235 ASP VAL TRP GLY GLN GLY THR THR VAL THR VAL SER SER SEQRES 11 H 235 ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SEQRES 12 H 235 SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU GLY SEQRES 13 H 235 CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SEQRES 14 H 235 SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS THR SEQRES 15 H 235 PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SEQRES 16 H 235 SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY THR SEQRES 17 H 235 GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN SEQRES 18 H 235 THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SER CYS ASP SEQRES 19 H 235 LYS SEQRES 1 L 229 ILE LEU PHE LEU VAL ALA THR ALA THR GLY VAL HIS SER SEQRES 2 L 229 GLU ILE VAL MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 3 L 229 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 4 L 229 GLN GLY ILE SER SER TYR LEU ALA TRP TYR GLN GLN LYS SEQRES 5 L 229 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR ALA ALA SER SEQRES 6 L 229 THR LEU GLN SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 7 L 229 GLY SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 8 L 229 GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN LEU SEQRES 9 L 229 ASP SER TYR PRO PRO GLY TYR THR PHE GLY GLN GLY THR SEQRES 10 L 229 LYS VAL ASP ILE LYS ARG THR VAL ALA ALA PRO SER VAL SEQRES 11 L 229 PHE ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY SEQRES 12 L 229 THR ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO SEQRES 13 L 229 ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU SEQRES 14 L 229 GLN SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SEQRES 15 L 229 SER LYS ASP SER THR TYR SER LEU SER SER THR LEU THR SEQRES 16 L 229 LEU SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA SEQRES 17 L 229 CYS GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR SEQRES 18 L 229 LYS SER PHE ASN ARG GLY GLU CYS SEQRES 1 E 205 GLU THR GLY HIS HIS HIS HIS HIS HIS THR ASN LEU CYS SEQRES 2 E 205 PRO PHE GLY GLU VAL PHE ASN ALA THR ARG PHE ALA SER SEQRES 3 E 205 VAL TYR ALA TRP ASN ARG LYS ARG ILE SER ASN CYS VAL SEQRES 4 E 205 ALA ASP TYR SER VAL LEU TYR ASN SER ALA SER PHE SER SEQRES 5 E 205 THR PHE LYS CYS TYR GLY VAL SER PRO THR LYS LEU ASN SEQRES 6 E 205 ASP LEU CYS PHE THR ASN VAL TYR ALA ASP SER PHE VAL SEQRES 7 E 205 ILE ARG GLY ASP GLU VAL ARG GLN ILE ALA PRO GLY GLN SEQRES 8 E 205 THR GLY LYS ILE ALA ASP TYR ASN TYR LYS LEU PRO ASP SEQRES 9 E 205 ASP PHE THR GLY CYS VAL ILE ALA TRP ASN SER ASN ASN SEQRES 10 E 205 LEU ASP SER LYS VAL GLY GLY ASN TYR ASN TYR LEU TYR SEQRES 11 E 205 ARG LEU PHE ARG LYS SER ASN LEU LYS PRO PHE GLU ARG SEQRES 12 E 205 ASP ILE SER THR GLU ILE TYR GLN ALA GLY SER THR PRO SEQRES 13 E 205 CYS ASN GLY VAL GLU GLY PHE ASN CYS TYR PHE PRO LEU SEQRES 14 E 205 GLN SER TYR GLY PHE GLN PRO THR ASN GLY VAL GLY TYR SEQRES 15 E 205 GLN PRO TYR ARG VAL VAL VAL LEU SER PHE GLU LEU LEU SEQRES 16 E 205 HIS ALA PRO ALA THR VAL CYS GLY LYS LYS HET NAG A 1 14 HET NAG A 2 14 HET FUC A 3 10 HET NO3 H 501 4 HET NO3 H 502 4 HET CL H 503 1 HET CL H 504 1 HET CL H 505 1 HET NO3 L 301 4 HET CL L 302 1 HET CL L 303 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM NO3 NITRATE ION HETNAM CL CHLORIDE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 4 NAG 2(C8 H15 N O6) FORMUL 4 FUC C6 H12 O5 FORMUL 5 NO3 3(N O3 1-) FORMUL 7 CL 5(CL 1-) FORMUL 13 HOH *213(H2 O) HELIX 1 AA1 THR H 28 ASN H 32 5 5 HELIX 2 AA2 ASP H 61 LYS H 64 5 4 HELIX 3 AA3 SER H 73 MET H 75 5 3 HELIX 4 AA4 ARG H 86 THR H 90 5 5 HELIX 5 AA5 MET H 100 TYR H 102 5 3 HELIX 6 AA6 SER H 160 ALA H 162 5 3 HELIX 7 AA7 SER H 191 LEU H 193 5 3 HELIX 8 AA8 LYS H 205 ASN H 208 5 4 HELIX 9 AA9 GLN L 79 PHE L 83 5 5 HELIX 10 AB1 SER L 123 LYS L 128 1 6 HELIX 11 AB2 LYS L 185 GLU L 189 1 5 HELIX 12 AB3 PHE E 338 ASN E 343 1 6 HELIX 13 AB4 SER E 349 TRP E 353 5 5 HELIX 14 AB5 TYR E 365 ASN E 370 1 6 HELIX 15 AB6 PRO E 384 ASN E 388 5 5 HELIX 16 AB7 ASP E 405 ILE E 410 5 6 HELIX 17 AB8 GLY E 416 ASN E 422 1 7 HELIX 18 AB9 SER E 438 SER E 443 1 6 HELIX 19 AC1 GLY E 502 TYR E 505 5 4 SHEET 1 AA1 4 GLN H 3 SER H 7 0 SHEET 2 AA1 4 LEU H 18 SER H 25 -1 O ALA H 23 N VAL H 5 SHEET 3 AA1 4 THR H 77 MET H 82 -1 O MET H 82 N LEU H 18 SHEET 4 AA1 4 PHE H 67 ASP H 72 -1 N THR H 68 O GLN H 81 SHEET 1 AA2 6 LEU H 11 ILE H 12 0 SHEET 2 AA2 6 THR H 111 VAL H 115 1 O THR H 114 N ILE H 12 SHEET 3 AA2 6 ALA H 91 ASP H 98 -1 N TYR H 93 O THR H 111 SHEET 4 AA2 6 TYR H 33 GLN H 39 -1 N VAL H 37 O TYR H 94 SHEET 5 AA2 6 LEU H 45 ILE H 51 -1 O GLU H 46 N ARG H 38 SHEET 6 AA2 6 THR H 57 TYR H 59 -1 O TYR H 58 N ILE H 50 SHEET 1 AA3 4 LEU H 11 ILE H 12 0 SHEET 2 AA3 4 THR H 111 VAL H 115 1 O THR H 114 N ILE H 12 SHEET 3 AA3 4 ALA H 91 ASP H 98 -1 N TYR H 93 O THR H 111 SHEET 4 AA3 4 ILE H 104 TRP H 107 -1 O VAL H 106 N ARG H 97 SHEET 1 AA4 4 SER H 124 LEU H 128 0 SHEET 2 AA4 4 THR H 139 TYR H 149 -1 O GLY H 143 N LEU H 128 SHEET 3 AA4 4 TYR H 180 PRO H 189 -1 O TYR H 180 N TYR H 149 SHEET 4 AA4 4 VAL H 167 THR H 169 -1 N HIS H 168 O VAL H 185 SHEET 1 AA5 4 SER H 124 LEU H 128 0 SHEET 2 AA5 4 THR H 139 TYR H 149 -1 O GLY H 143 N LEU H 128 SHEET 3 AA5 4 TYR H 180 PRO H 189 -1 O TYR H 180 N TYR H 149 SHEET 4 AA5 4 VAL H 173 LEU H 174 -1 N VAL H 173 O SER H 181 SHEET 1 AA6 3 THR H 155 TRP H 158 0 SHEET 2 AA6 3 TYR H 198 HIS H 204 -1 O ASN H 201 N SER H 157 SHEET 3 AA6 3 THR H 209 VAL H 215 -1 O VAL H 211 N VAL H 202 SHEET 1 AA7 4 MET L 4 SER L 7 0 SHEET 2 AA7 4 VAL L 19 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 AA7 4 ASP L 70 ILE L 75 -1 O LEU L 73 N ILE L 21 SHEET 4 AA7 4 PHE L 62 SER L 65 -1 N SER L 65 O THR L 72 SHEET 1 AA8 6 SER L 10 ALA L 13 0 SHEET 2 AA8 6 THR L 104 ILE L 108 1 O LYS L 105 N LEU L 11 SHEET 3 AA8 6 THR L 85 GLN L 90 -1 N TYR L 86 O THR L 104 SHEET 4 AA8 6 LEU L 33 GLN L 38 -1 N GLN L 38 O THR L 85 SHEET 5 AA8 6 LYS L 45 TYR L 49 -1 O LYS L 45 N GLN L 37 SHEET 6 AA8 6 THR L 53 LEU L 54 -1 O THR L 53 N TYR L 49 SHEET 1 AA9 4 SER L 116 PHE L 120 0 SHEET 2 AA9 4 THR L 131 PHE L 141 -1 O LEU L 137 N PHE L 118 SHEET 3 AA9 4 TYR L 175 SER L 184 -1 O LEU L 181 N VAL L 134 SHEET 4 AA9 4 SER L 161 VAL L 165 -1 N GLN L 162 O THR L 180 SHEET 1 AB1 4 ALA L 155 GLN L 157 0 SHEET 2 AB1 4 LYS L 147 VAL L 152 -1 N TRP L 150 O GLN L 157 SHEET 3 AB1 4 VAL L 193 THR L 199 -1 O GLU L 197 N GLN L 149 SHEET 4 AB1 4 VAL L 207 ASN L 212 -1 O VAL L 207 N VAL L 198 SHEET 1 AB2 5 ASN E 354 ILE E 358 0 SHEET 2 AB2 5 ASN E 394 ARG E 403 -1 O VAL E 395 N ILE E 358 SHEET 3 AB2 5 PRO E 507 GLU E 516 -1 O VAL E 512 N ASP E 398 SHEET 4 AB2 5 GLY E 431 ASN E 437 -1 N ILE E 434 O VAL E 511 SHEET 5 AB2 5 THR E 376 TYR E 380 -1 N LYS E 378 O VAL E 433 SHEET 1 AB3 3 CYS E 361 ALA E 363 0 SHEET 2 AB3 3 VAL E 524 GLY E 526 1 O CYS E 525 N ALA E 363 SHEET 3 AB3 3 CYS E 391 PHE E 392 -1 N PHE E 392 O VAL E 524 SHEET 1 AB4 2 LEU E 452 ARG E 454 0 SHEET 2 AB4 2 LEU E 492 SER E 494 -1 O GLN E 493 N TYR E 453 SHEET 1 AB5 2 TYR E 473 GLN E 474 0 SHEET 2 AB5 2 CYS E 488 TYR E 489 -1 O TYR E 489 N TYR E 473 SSBOND 1 CYS H 22 CYS H 95 1555 1555 2.03 SSBOND 2 CYS H 144 CYS H 200 1555 1555 2.04 SSBOND 3 CYS L 23 CYS L 88 1555 1555 2.04 SSBOND 4 CYS L 136 CYS L 196 1555 1555 2.04 SSBOND 5 CYS E 336 CYS E 361 1555 1555 2.05 SSBOND 6 CYS E 379 CYS E 432 1555 1555 2.04 SSBOND 7 CYS E 391 CYS E 525 1555 1555 2.05 SSBOND 8 CYS E 480 CYS E 488 1555 1555 2.06 LINK ND2 ASN E 343 C1 NAG A 1 1555 1555 1.45 LINK O4 NAG A 1 C1 NAG A 2 1555 1555 1.45 LINK O6 NAG A 1 C1 FUC A 3 1555 1555 1.43 CISPEP 1 PHE H 150 PRO H 151 0 -8.60 CISPEP 2 GLU H 152 PRO H 153 0 -4.20 CISPEP 3 SER L 7 PRO L 8 0 -0.25 CISPEP 4 TYR L 94 PRO L 95 0 0.53 CISPEP 5 TYR L 142 PRO L 143 0 5.09 CRYST1 81.419 150.709 145.504 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012282 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006635 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006873 0.00000