HEADER IMMUNE SYSTEM 05-JAN-21 7BG1 TITLE STRUCTURE OF ANTI-FLAG M2 FAB DOMAIN REMODELED BASED ON PROTEOMIC TITLE 2 SEQUENCING COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTI-FLAG M2 HEAVY CHAIN; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: ANTI-FLAG M2 LIGHT CHAIN; COMPND 7 CHAIN: L; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_TAXID: 10090; SOURCE 4 GENE: IGHV1-04/IGHJ2; SOURCE 5 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 7 EXPRESSION_SYSTEM_TISSUE: OVARIAN; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 10 ORGANISM_TAXID: 10090; SOURCE 11 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 13 EXPRESSION_SYSTEM_TISSUE: OVARIAN KEYWDS ANTIBODY, IMMUNOGLOBULIN, IGG, FAB, MONOCLONAL, M2, PROTEIN KEYWDS 2 PURIFICATION, FLAG, ANTI-FLAG, FLAG-TAG, IMMUNOHISTOCHEMISTRY, KEYWDS 3 IMMUNOCYTOCHEMISTRY, IMMUNOPRECIPITATION, ELISA, WESTERN BLOT, KEYWDS 4 RESEARCH TOOL, AFFINITY TAG, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR M.F.PRONKER,J.SNIJDER REVDAT 2 31-JAN-24 7BG1 1 JRNL REVDAT 1 21-JUL-21 7BG1 0 JRNL AUTH W.PENG,M.F.PRONKER,J.SNIJDER JRNL TITL MASS SPECTROMETRY-BASED DE NOVO SEQUENCING OF MONOCLONAL JRNL TITL 2 ANTIBODIES USING MULTIPLE PROTEASES AND A DUAL FRAGMENTATION JRNL TITL 3 SCHEME. JRNL REF J.PROTEOME RES. V. 20 3559 2021 JRNL REFN ESSN 1535-3907 JRNL PMID 34121409 JRNL DOI 10.1021/ACS.JPROTEOME.1C00169 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH W.PENG,M.F.PRONKER,J.SNIJDER REMARK 1 TITL MASS SPECTROMETRY-BASED DE NOVO SEQUENCING OF THE REMARK 1 TITL 2 ANTI-FLAG-M2 ANTIBODY USING MULTIPLE PROTEASES AND A DUAL REMARK 1 TITL 3 FRAGMENTATION SCHEME REMARK 1 REF BIORXIV 2021 REMARK 1 REFN ISSN 2692-8205 REMARK 1 DOI 10.1101/2021.01.07.425675 REMARK 2 REMARK 2 RESOLUTION. 1.86 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.86 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.52 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 3 NUMBER OF REFLECTIONS : 39988 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 2008 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.5200 - 4.4800 0.97 2999 135 0.1994 0.2193 REMARK 3 2 4.4800 - 3.5600 1.00 2874 172 0.1847 0.2077 REMARK 3 3 3.5600 - 3.1100 1.00 2847 163 0.2087 0.2830 REMARK 3 4 3.1100 - 2.8200 1.00 2878 130 0.2292 0.2963 REMARK 3 5 2.8200 - 2.6200 1.00 2824 136 0.2334 0.2497 REMARK 3 6 2.6200 - 2.4700 1.00 2814 156 0.2390 0.2943 REMARK 3 7 2.4700 - 2.3400 1.00 2831 147 0.2456 0.2736 REMARK 3 8 2.3400 - 2.2400 1.00 2780 164 0.2368 0.2568 REMARK 3 9 2.2400 - 2.1600 1.00 2797 142 0.2401 0.2912 REMARK 3 10 2.1600 - 2.0800 1.00 2776 159 0.2505 0.3234 REMARK 3 11 2.0800 - 2.0200 0.99 2793 137 0.2539 0.2980 REMARK 3 12 2.0200 - 1.9600 0.91 2546 124 0.2623 0.2683 REMARK 3 13 1.9600 - 1.9100 0.81 2254 121 0.2517 0.2883 REMARK 3 14 1.9100 - 1.8600 0.72 1967 122 0.2741 0.2992 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.205 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.020 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.69 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 3327 REMARK 3 ANGLE : 0.727 4534 REMARK 3 CHIRALITY : 0.049 506 REMARK 3 PLANARITY : 0.004 574 REMARK 3 DIHEDRAL : 18.931 1184 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 1 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.8059 32.1661 -3.8257 REMARK 3 T TENSOR REMARK 3 T11: 0.1774 T22: 0.2742 REMARK 3 T33: 0.2427 T12: 0.0389 REMARK 3 T13: -0.0052 T23: -0.0530 REMARK 3 L TENSOR REMARK 3 L11: 7.6054 L22: 3.2787 REMARK 3 L33: 1.9263 L12: 0.8012 REMARK 3 L13: -0.1050 L23: -0.0902 REMARK 3 S TENSOR REMARK 3 S11: 0.0340 S12: 0.3013 S13: 0.2142 REMARK 3 S21: -0.1723 S22: -0.0934 S23: 0.2710 REMARK 3 S31: -0.1452 S32: -0.1902 S33: 0.0628 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 119 THROUGH 213 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.5747 3.3669 17.9272 REMARK 3 T TENSOR REMARK 3 T11: 0.7371 T22: 1.3683 REMARK 3 T33: 0.7403 T12: -0.2813 REMARK 3 T13: -0.0242 T23: 0.5852 REMARK 3 L TENSOR REMARK 3 L11: 0.4141 L22: 3.3745 REMARK 3 L33: 2.9166 L12: -0.7103 REMARK 3 L13: 1.1785 L23: -1.6959 REMARK 3 S TENSOR REMARK 3 S11: 0.3889 S12: -1.9880 S13: -0.7864 REMARK 3 S21: 0.8313 S22: -0.2005 S23: 0.5848 REMARK 3 S31: 0.3127 S32: -1.0017 S33: -0.5435 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 214 THROUGH 215 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.3638 -9.0511 22.1762 REMARK 3 T TENSOR REMARK 3 T11: 0.8363 T22: 1.6890 REMARK 3 T33: 1.4754 T12: -0.5720 REMARK 3 T13: -0.2224 T23: 0.3133 REMARK 3 L TENSOR REMARK 3 L11: 5.6343 L22: 6.6624 REMARK 3 L33: 5.9190 L12: -1.2159 REMARK 3 L13: 5.7036 L23: -0.2656 REMARK 3 S TENSOR REMARK 3 S11: 0.3732 S12: -0.7778 S13: -0.0205 REMARK 3 S21: 0.3533 S22: -0.2594 S23: -0.4808 REMARK 3 S31: 0.1020 S32: 0.1483 S33: -0.1122 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 1 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.4107 20.2740 2.8807 REMARK 3 T TENSOR REMARK 3 T11: 0.3540 T22: 0.3366 REMARK 3 T33: 0.2221 T12: 0.0439 REMARK 3 T13: 0.0160 T23: -0.0670 REMARK 3 L TENSOR REMARK 3 L11: 4.0937 L22: 0.8343 REMARK 3 L33: 8.9339 L12: -0.0545 REMARK 3 L13: 2.3245 L23: -2.6197 REMARK 3 S TENSOR REMARK 3 S11: 0.0381 S12: -0.2854 S13: -0.0894 REMARK 3 S21: -0.0285 S22: -0.0255 S23: -0.0012 REMARK 3 S31: 1.2220 S32: 0.1125 S33: -0.0625 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 26 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.9918 32.8187 0.1991 REMARK 3 T TENSOR REMARK 3 T11: 0.1391 T22: 0.2572 REMARK 3 T33: 0.2168 T12: -0.0106 REMARK 3 T13: -0.0166 T23: -0.0367 REMARK 3 L TENSOR REMARK 3 L11: 5.2217 L22: 3.9339 REMARK 3 L33: 1.5806 L12: 0.6282 REMARK 3 L13: 0.3454 L23: 0.0359 REMARK 3 S TENSOR REMARK 3 S11: 0.0784 S12: -0.3173 S13: 0.5529 REMARK 3 S21: 0.1024 S22: -0.0229 S23: 0.0857 REMARK 3 S31: -0.1786 S32: -0.0343 S33: -0.0796 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 67 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.3061 28.0860 5.4374 REMARK 3 T TENSOR REMARK 3 T11: 0.1588 T22: 0.3425 REMARK 3 T33: 0.2092 T12: 0.0194 REMARK 3 T13: -0.0390 T23: -0.0651 REMARK 3 L TENSOR REMARK 3 L11: 1.9058 L22: 3.2018 REMARK 3 L33: 6.4855 L12: 1.7107 REMARK 3 L13: 0.2460 L23: -3.1097 REMARK 3 S TENSOR REMARK 3 S11: 0.1544 S12: -0.4325 S13: 0.3457 REMARK 3 S21: 0.2419 S22: 0.1853 S23: -0.2390 REMARK 3 S31: -0.3116 S32: 0.5972 S33: -0.3310 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 91 THROUGH 109 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.0842 27.3901 -4.9701 REMARK 3 T TENSOR REMARK 3 T11: 0.1395 T22: 0.2750 REMARK 3 T33: 0.1756 T12: 0.0101 REMARK 3 T13: 0.0070 T23: 0.0012 REMARK 3 L TENSOR REMARK 3 L11: 5.9883 L22: 5.4063 REMARK 3 L33: 6.8087 L12: 0.1159 REMARK 3 L13: 0.2840 L23: 1.2776 REMARK 3 S TENSOR REMARK 3 S11: 0.1355 S12: 0.4583 S13: 0.4295 REMARK 3 S21: -0.5183 S22: -0.1199 S23: 0.1677 REMARK 3 S31: -0.0698 S32: -0.3917 S33: -0.0492 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 110 THROUGH 224 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.7374 3.0288 8.6191 REMARK 3 T TENSOR REMARK 3 T11: 0.5697 T22: 0.2876 REMARK 3 T33: 0.4349 T12: -0.0720 REMARK 3 T13: -0.1581 T23: 0.1207 REMARK 3 L TENSOR REMARK 3 L11: 4.1053 L22: 4.0197 REMARK 3 L33: 2.1190 L12: -0.0955 REMARK 3 L13: 1.1731 L23: -1.5890 REMARK 3 S TENSOR REMARK 3 S11: 0.4071 S12: -0.3482 S13: -0.7974 REMARK 3 S21: -0.5489 S22: 0.2186 S23: 0.7056 REMARK 3 S31: 0.8971 S32: -0.3832 S33: -0.3887 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7BG1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-JAN-21. REMARK 100 THE DEPOSITION ID IS D_1292113277. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JUN-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46087 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.3 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : 0.03300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 58.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.20 REMARK 200 R MERGE FOR SHELL (I) : 0.24900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2G60 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG 4000, 0.1M AMMONIUM SULFATE, REMARK 280 PH 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 43.68000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 66.88000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.68000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 66.88000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -50.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS H -2 REMARK 465 VAL H -1 REMARK 465 SER H 0 REMARK 465 GLY H 133 REMARK 465 SER H 134 REMARK 465 ALA H 135 REMARK 465 ALA H 136 REMARK 465 GLN H 137 REMARK 465 THR H 138 REMARK 465 ASN H 139 REMARK 465 ASP H 228 REMARK 465 CYS H 229 REMARK 465 SER L 0 REMARK 465 GLN L 161 REMARK 465 ASN L 162 REMARK 465 GLY L 163 REMARK 465 VAL L 164 REMARK 465 LEU L 165 REMARK 465 ARG L 216 REMARK 465 ASN L 217 REMARK 465 GLN L 218 REMARK 465 CYS L 219 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN H 6 -158.94 -101.27 REMARK 500 LYS H 100 -62.13 -158.09 REMARK 500 VAL L 56 -54.55 71.64 REMARK 500 ARG L 82 72.17 44.51 REMARK 500 ASN L 143 60.31 63.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH L 507 DISTANCE = 8.34 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2G60 RELATED DB: PDB REMARK 900 REMODELED BASED ON THIS DATASET USING MASS SPECTROMETRIC SEQUENCING DBREF 7BG1 H -2 229 PDB 7BG1 7BG1 -2 229 DBREF 7BG1 L 0 219 PDB 7BG1 7BG1 0 219 SEQRES 1 H 222 HIS VAL SER GLN VAL GLN LEU GLN GLN SER ALA ALA GLU SEQRES 2 H 222 LEU ALA ARG PRO GLY ALA SER VAL LYS MET SER CYS LYS SEQRES 3 H 222 ALA SER GLY TYR SER PHE THR THR TYR THR ILE HIS TRP SEQRES 4 H 222 VAL LYS GLN ARG PRO GLY GLN GLY LEU GLU TRP ILE GLY SEQRES 5 H 222 TYR ILE ASN PRO SER SER GLY TYR ALA ALA TYR ASN GLN SEQRES 6 H 222 ASN PHE LYS ASP GLU THR THR LEU THR ALA ASP PRO SER SEQRES 7 H 222 SER SER THR ALA TYR MET GLU LEU ASN SER LEU THR SER SEQRES 8 H 222 GLU ASP SER ALA VAL TYR TYR CYS ALA ARG GLU LYS PHE SEQRES 9 H 222 TYR GLY TYR ASP TYR TRP GLY GLN GLY ALA THR LEU THR SEQRES 10 H 222 VAL SER SER ALA LYS THR THR PRO PRO SER VAL TYR PRO SEQRES 11 H 222 LEU ALA PRO GLY SER ALA ALA GLN THR ASN SER MET VAL SEQRES 12 H 222 THR LEU GLY CYS LEU VAL LYS GLY TYR PHE PRO GLU PRO SEQRES 13 H 222 VAL THR VAL THR TRP ASN SER GLY SER LEU SER SER GLY SEQRES 14 H 222 VAL HIS THR PHE PRO ALA VAL LEU GLN SER ASP LEU TYR SEQRES 15 H 222 THR LEU SER SER SER VAL THR VAL PRO SER SER THR TRP SEQRES 16 H 222 PRO SER GLN THR VAL THR CYS ASN VAL ALA HIS PRO ALA SEQRES 17 H 222 SER SER THR LYS VAL ASP LYS LYS ILE VAL PRO ARG ASP SEQRES 18 H 222 CYS SEQRES 1 L 220 SER ASP VAL LEU MET THR GLN ILE PRO LEU SER LEU PRO SEQRES 2 L 220 VAL SER LEU GLY ASP GLN ALA SER ILE SER CYS ARG SER SEQRES 3 L 220 SER GLN SER ILE VAL HIS ARG ASN GLY ASN THR TYR LEU SEQRES 4 L 220 GLU TRP TYR LEU LEU LYS PRO GLY GLN SER PRO LYS LEU SEQRES 5 L 220 LEU ILE TYR LYS VAL SER ASN ARG PHE SER GLY VAL PRO SEQRES 6 L 220 ASP ARG PHE SER GLY SER GLY SER GLY THR ASP PHE THR SEQRES 7 L 220 LEU LYS ILE SER ARG VAL GLU ALA GLU ASP LEU GLY VAL SEQRES 8 L 220 TYR TYR CYS PHE GLN GLY SER HIS VAL PRO TYR THR PHE SEQRES 9 L 220 GLY GLY GLY THR LYS LEU GLU ILE ARG ARG ALA ASP ALA SEQRES 10 L 220 ALA PRO THR VAL SER ILE PHE PRO PRO SER SER GLU GLN SEQRES 11 L 220 LEU THR SER GLY GLY ALA SER VAL VAL CYS PHE LEU ASN SEQRES 12 L 220 ASN PHE TYR PRO LYS ASP ILE ASN VAL LYS TRP LYS ILE SEQRES 13 L 220 ASP GLY SER GLU ARG GLN ASN GLY VAL LEU ASN SER TRP SEQRES 14 L 220 THR ASP GLN ASP SER LYS ASP SER THR TYR SER MET SER SEQRES 15 L 220 SER THR LEU THR LEU THR LYS ASP GLU TYR GLU ARG HIS SEQRES 16 L 220 ASN SER TYR THR CYS GLU ALA THR HIS LYS THR SER THR SEQRES 17 L 220 SER PRO ILE VAL LYS SER PHE ASN ARG ASN GLN CYS HET SO4 H 301 5 HET CL H 302 1 HET SO4 L 301 5 HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION FORMUL 3 SO4 2(O4 S 2-) FORMUL 4 CL CL 1- FORMUL 6 HOH *250(H2 O) HELIX 1 AA1 SER H 28 TYR H 32 5 5 HELIX 2 AA2 PHE H 64 ASP H 66 5 3 HELIX 3 AA3 PRO H 74 SER H 76 5 3 HELIX 4 AA4 THR H 87 SER H 91 5 5 HELIX 5 AA5 SER H 167 SER H 169 5 3 HELIX 6 AA6 PRO H 214 SER H 217 5 4 HELIX 7 AA7 GLU L 84 LEU L 88 5 5 HELIX 8 AA8 SER L 126 GLY L 133 1 8 HELIX 9 AA9 LYS L 188 ARG L 193 1 6 SHEET 1 AA1 4 GLN H 3 GLN H 5 0 SHEET 2 AA1 4 VAL H 18 SER H 25 -1 O LYS H 23 N GLN H 5 SHEET 3 AA1 4 THR H 78 LEU H 83 -1 O MET H 81 N MET H 20 SHEET 4 AA1 4 THR H 68 ASP H 73 -1 N ASP H 73 O THR H 78 SHEET 1 AA2 6 ALA H 9 ALA H 12 0 SHEET 2 AA2 6 ALA H 111 VAL H 115 1 O THR H 112 N GLU H 10 SHEET 3 AA2 6 ALA H 92 GLU H 99 -1 N ALA H 92 O LEU H 113 SHEET 4 AA2 6 THR H 33 GLN H 39 -1 N HIS H 35 O ALA H 97 SHEET 5 AA2 6 LEU H 45 ILE H 51 -1 O ILE H 48 N TRP H 36 SHEET 6 AA2 6 ALA H 58 TYR H 60 -1 O ALA H 59 N TYR H 50 SHEET 1 AA3 4 SER H 124 LEU H 128 0 SHEET 2 AA3 4 MET H 141 TYR H 151 -1 O GLY H 145 N LEU H 128 SHEET 3 AA3 4 LEU H 188 PRO H 198 -1 O TYR H 189 N TYR H 151 SHEET 4 AA3 4 VAL H 175 THR H 177 -1 N HIS H 176 O SER H 194 SHEET 1 AA4 4 SER H 124 LEU H 128 0 SHEET 2 AA4 4 MET H 141 TYR H 151 -1 O GLY H 145 N LEU H 128 SHEET 3 AA4 4 LEU H 188 PRO H 198 -1 O TYR H 189 N TYR H 151 SHEET 4 AA4 4 VAL H 181 GLN H 183 -1 N GLN H 183 O LEU H 188 SHEET 1 AA5 3 THR H 157 TRP H 161 0 SHEET 2 AA5 3 THR H 208 HIS H 213 -1 O ASN H 210 N THR H 160 SHEET 3 AA5 3 THR H 218 LYS H 223 -1 O VAL H 220 N VAL H 211 SHEET 1 AA6 4 MET L 4 ILE L 7 0 SHEET 2 AA6 4 ALA L 19 SER L 25 -1 O SER L 22 N ILE L 7 SHEET 3 AA6 4 ASP L 75 ILE L 80 -1 O LEU L 78 N ILE L 21 SHEET 4 AA6 4 PHE L 67 SER L 72 -1 N SER L 68 O LYS L 79 SHEET 1 AA7 6 SER L 10 SER L 14 0 SHEET 2 AA7 6 THR L 107 ARG L 112 1 O ARG L 112 N VAL L 13 SHEET 3 AA7 6 GLY L 89 GLN L 95 -1 N GLY L 89 O LEU L 109 SHEET 4 AA7 6 LEU L 38 LEU L 43 -1 N LEU L 43 O VAL L 90 SHEET 5 AA7 6 LYS L 50 TYR L 54 -1 O LEU L 52 N TRP L 40 SHEET 6 AA7 6 ASN L 58 ARG L 59 -1 O ASN L 58 N TYR L 54 SHEET 1 AA8 4 SER L 10 SER L 14 0 SHEET 2 AA8 4 THR L 107 ARG L 112 1 O ARG L 112 N VAL L 13 SHEET 3 AA8 4 GLY L 89 GLN L 95 -1 N GLY L 89 O LEU L 109 SHEET 4 AA8 4 THR L 102 PHE L 103 -1 O THR L 102 N GLN L 95 SHEET 1 AA9 4 THR L 119 PHE L 123 0 SHEET 2 AA9 4 GLY L 134 PHE L 144 -1 O ASN L 142 N THR L 119 SHEET 3 AA9 4 TYR L 178 THR L 187 -1 O TYR L 178 N PHE L 144 SHEET 4 AA9 4 SER L 167 TRP L 168 -1 N SER L 167 O SER L 181 SHEET 1 AB1 4 SER L 158 GLU L 159 0 SHEET 2 AB1 4 ASN L 150 ILE L 155 -1 N ILE L 155 O SER L 158 SHEET 3 AB1 4 TYR L 197 THR L 202 -1 O GLU L 200 N LYS L 152 SHEET 4 AB1 4 ILE L 210 PHE L 214 -1 O ILE L 210 N ALA L 201 SSBOND 1 CYS H 22 CYS H 96 1555 1555 2.05 SSBOND 2 CYS H 146 CYS H 209 1555 1555 2.05 SSBOND 3 CYS L 23 CYS L 93 1555 1555 2.06 SSBOND 4 CYS L 139 CYS L 199 1555 1555 2.04 CISPEP 1 PHE H 152 PRO H 153 0 -1.92 CISPEP 2 GLU H 154 PRO H 155 0 -3.42 CISPEP 3 TRP H 202 PRO H 203 0 3.31 CISPEP 4 ILE L 7 PRO L 8 0 1.29 CISPEP 5 VAL L 99 PRO L 100 0 -0.52 CISPEP 6 TYR L 145 PRO L 146 0 1.72 CRYST1 87.360 133.760 41.480 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011447 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007476 0.000000 0.00000 SCALE3 0.000000 0.000000 0.024108 0.00000