HEADER OXIDOREDUCTASE 12-JAN-21 7BI1 TITLE XFEL CRYSTAL STRUCTURE OF SOYBEAN ASCORBATE PEROXIDASE COMPOUND II COMPND MOL_ID: 1; COMPND 2 MOLECULE: ASCORBATE PEROXIDASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CYTOSOLIC ASCORBATE PEROXIDASE 1,UNCHARACTERIZED PROTEIN; COMPND 5 EC: 1.11.1.11; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GLYCINE MAX; SOURCE 3 ORGANISM_COMMON: SOYBEAN; SOURCE 4 ORGANISM_TAXID: 3847; SOURCE 5 GENE: APX1, GLYMA_U021900; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS INTERMEDIATES, HEME PROTEIN, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR H.KWON,T.TOSHA,H.SUGIMOTO,E.L.RAVEN,P.C.E.MOODY REVDAT 3 31-JAN-24 7BI1 1 REMARK REVDAT 2 30-JUN-21 7BI1 1 JRNL REVDAT 1 21-APR-21 7BI1 0 JRNL AUTH H.KWON,J.BASRAN,C.PATHAK,M.HUSSAIN,S.L.FREEMAN,A.J.FIELDING, JRNL AUTH 2 A.J.BAILEY,N.STEFANOU,H.A.SPARKES,T.TOSHA,K.YAMASHITA, JRNL AUTH 3 K.HIRATA,H.MURAKAMI,G.UENO,H.AGO,K.TONO,M.YAMAMOTO,H.SAWAI, JRNL AUTH 4 Y.SHIRO,H.SUGIMOTO,E.L.RAVEN,P.C.E.MOODY JRNL TITL XFEL CRYSTAL STRUCTURES OF PEROXIDASE COMPOUND II. JRNL REF ANGEW.CHEM.INT.ED.ENGL. V. 60 14578 2021 JRNL REFN ESSN 1521-3773 JRNL PMID 33826799 JRNL DOI 10.1002/ANIE.202103010 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SHELX REMARK 3 AUTHORS : G.M.SHELDRICK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 58.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : NULL REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : NULL REMARK 3 FREE R VALUE (F>4SIG(F)) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1880 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 44 REMARK 3 SOLVENT ATOMS : 284 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : NULL REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : NULL REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : NULL REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : NULL REMARK 3 NUMBER OF RESTRAINTS : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 ANGLE DISTANCES (A) : NULL REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : NULL REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : NULL REMARK 3 ZERO CHIRAL VOLUMES (A**3) : NULL REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : NULL REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : NULL REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : NULL REMARK 3 SIMILAR ADP COMPONENTS (A**2) : NULL REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: NULL REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : NULL REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7BI1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-JAN-21. REMARK 100 THE DEPOSITION ID IS D_1292112678. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-APR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : FREE ELECTRON LASER REMARK 200 BEAMLINE : BL2 REMARK 200 X-RAY GENERATOR MODEL : SACLA BEAMLINE BL2 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.24 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTFEL REMARK 200 DATA SCALING SOFTWARE : CRYSTFEL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41508 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 58.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 662.0 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.51 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5JPR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.25 M LITHIUM SULFATE, 0.1 M HEPES PH REMARK 280 8.3 - 8.9, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 40.96750 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 40.96750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 37.52500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 40.96750 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 40.96750 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 37.52500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 40.96750 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 40.96750 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 37.52500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 40.96750 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 40.96750 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 37.52500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 419 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 424 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 435 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 632 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -10 REMARK 465 ARG A -9 REMARK 465 GLY A -8 REMARK 465 SER A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 GLY A 0 REMARK 465 SER A 1 REMARK 465 ALA A 250 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 18 CD CE NZ REMARK 470 LYS A 22 CE NZ REMARK 470 ARG A 38 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 124 CG CD OE1 OE2 REMARK 470 GLU A 200 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 618 O HOH A 643 1.25 REMARK 500 O HOH A 480 O HOH A 627 1.69 REMARK 500 O HOH A 506 O HOH A 522 2.00 REMARK 500 NE2 GLN A 13 O HOH A 401 2.11 REMARK 500 CG GLN A 13 O HOH A 401 2.13 REMARK 500 O HOH A 496 O HOH A 633 2.14 REMARK 500 O HOH A 577 O HOH A 654 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 31 NE - CZ - NH1 ANGL. DEV. = -4.6 DEGREES REMARK 500 ARG A 142 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 PHE A 217 CB - CG - CD1 ANGL. DEV. = 4.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 172 -88.63 -101.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 31 0.08 SIDE CHAIN REMARK 500 ARG A 79 0.19 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 681 DISTANCE = 5.96 ANGSTROMS REMARK 525 HOH A 682 DISTANCE = 6.39 ANGSTROMS REMARK 525 HOH A 683 DISTANCE = 6.46 ANGSTROMS REMARK 525 HOH A 684 DISTANCE = 7.11 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 301 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 163 NE2 REMARK 620 2 HEM A 301 NA 96.6 REMARK 620 3 HEM A 301 NB 89.1 88.6 REMARK 620 4 HEM A 301 NC 91.5 171.9 92.1 REMARK 620 5 HEM A 301 ND 92.7 89.3 177.4 89.7 REMARK 620 6 HOH A 406 O 172.7 87.4 84.9 84.6 93.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 302 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 164 O REMARK 620 2 THR A 164 OG1 66.4 REMARK 620 3 THR A 180 OG1 67.0 102.6 REMARK 620 4 ASN A 182 O 93.8 158.5 75.4 REMARK 620 5 ASN A 182 OD1 139.2 134.8 73.5 65.8 REMARK 620 6 ILE A 185 O 90.5 95.0 142.0 76.1 115.8 REMARK 620 7 ASP A 187 OD1 125.6 60.2 133.6 136.2 89.4 84.3 REMARK 620 8 SER A 189 OG 120.7 71.4 84.4 128.8 63.5 133.4 49.8 REMARK 620 N 1 2 3 4 5 6 7 DBREF 7BI1 A 2 250 UNP Q43758 Q43758_SOYBN 2 250 SEQADV 7BI1 MET A -10 UNP Q43758 INITIATING METHIONINE SEQADV 7BI1 ARG A -9 UNP Q43758 EXPRESSION TAG SEQADV 7BI1 GLY A -8 UNP Q43758 EXPRESSION TAG SEQADV 7BI1 SER A -7 UNP Q43758 EXPRESSION TAG SEQADV 7BI1 HIS A -6 UNP Q43758 EXPRESSION TAG SEQADV 7BI1 HIS A -5 UNP Q43758 EXPRESSION TAG SEQADV 7BI1 HIS A -4 UNP Q43758 EXPRESSION TAG SEQADV 7BI1 HIS A -3 UNP Q43758 EXPRESSION TAG SEQADV 7BI1 HIS A -2 UNP Q43758 EXPRESSION TAG SEQADV 7BI1 HIS A -1 UNP Q43758 EXPRESSION TAG SEQADV 7BI1 GLY A 0 UNP Q43758 EXPRESSION TAG SEQADV 7BI1 SER A 1 UNP Q43758 EXPRESSION TAG SEQRES 1 A 261 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER GLY SEQRES 2 A 261 LYS SER TYR PRO THR VAL SER ALA ASP TYR GLN LYS ALA SEQRES 3 A 261 VAL GLU LYS ALA LYS LYS LYS LEU ARG GLY PHE ILE ALA SEQRES 4 A 261 GLU LYS ARG CYS ALA PRO LEU MET LEU ARG LEU ALA TRP SEQRES 5 A 261 HIS SER ALA GLY THR PHE ASP LYS GLY THR LYS THR GLY SEQRES 6 A 261 GLY PRO PHE GLY THR ILE LYS HIS PRO ALA GLU LEU ALA SEQRES 7 A 261 HIS SER ALA ASN ASN GLY LEU ASP ILE ALA VAL ARG LEU SEQRES 8 A 261 LEU GLU PRO LEU LYS ALA GLU PHE PRO ILE LEU SER TYR SEQRES 9 A 261 ALA ASP PHE TYR GLN LEU ALA GLY VAL VAL ALA VAL GLU SEQRES 10 A 261 VAL THR GLY GLY PRO GLU VAL PRO PHE HIS PRO GLY ARG SEQRES 11 A 261 GLU ASP LYS PRO GLU PRO PRO PRO GLU GLY ARG LEU PRO SEQRES 12 A 261 ASP ALA THR LYS GLY SER ASP HIS LEU ARG ASP VAL PHE SEQRES 13 A 261 GLY LYS ALA MET GLY LEU THR ASP GLN ASP ILE VAL ALA SEQRES 14 A 261 LEU SER GLY GLY HIS THR ILE GLY ALA ALA HIS LYS GLU SEQRES 15 A 261 ARG SER GLY PHE GLU GLY PRO TRP THR SER ASN PRO LEU SEQRES 16 A 261 ILE PHE ASP ASN SER TYR PHE THR GLU LEU LEU SER GLY SEQRES 17 A 261 GLU LYS GLU GLY LEU LEU GLN LEU PRO SER ASP LYS ALA SEQRES 18 A 261 LEU LEU SER ASP PRO VAL PHE ARG PRO LEU VAL ASP LYS SEQRES 19 A 261 TYR ALA ALA ASP GLU ASP ALA PHE PHE ALA ASP TYR ALA SEQRES 20 A 261 GLU ALA HIS GLN LYS LEU SER GLU LEU GLY PHE ALA ASP SEQRES 21 A 261 ALA HET HEM A 301 43 HET K A 302 1 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM K POTASSIUM ION HETSYN HEM HEME FORMUL 2 HEM C34 H32 FE N4 O4 FORMUL 3 K K 1+ FORMUL 4 HOH *284(H2 O) HELIX 1 AA1 SER A 9 ARG A 31 1 23 HELIX 2 AA2 CYS A 32 GLY A 45 1 14 HELIX 3 AA3 GLY A 58 LYS A 61 5 4 HELIX 4 AA4 HIS A 62 ALA A 67 1 6 HELIX 5 AA5 HIS A 68 ASN A 72 5 5 HELIX 6 AA6 GLY A 73 GLU A 87 1 15 HELIX 7 AA7 SER A 92 THR A 108 1 17 HELIX 8 AA8 GLY A 137 GLY A 146 1 10 HELIX 9 AA9 THR A 152 GLY A 161 1 10 HELIX 10 AB1 GLY A 162 ILE A 165 5 4 HELIX 11 AB2 ASN A 188 SER A 196 1 9 HELIX 12 AB3 LEU A 205 ASP A 214 1 10 HELIX 13 AB4 VAL A 216 ASP A 227 1 12 HELIX 14 AB5 ASP A 227 GLU A 244 1 18 SHEET 1 AA1 2 ALA A 167 ALA A 168 0 SHEET 2 AA1 2 GLY A 177 PRO A 178 -1 O GLY A 177 N ALA A 168 LINK NE2 HIS A 163 FE HEM A 301 1555 1555 2.02 LINK O THR A 164 K K A 302 1555 1555 2.61 LINK OG1 THR A 164 K K A 302 1555 1555 2.97 LINK OG1 THR A 180 K K A 302 1555 1555 2.95 LINK O ASN A 182 K K A 302 1555 1555 2.76 LINK OD1 ASN A 182 K K A 302 1555 1555 2.69 LINK O ILE A 185 K K A 302 1555 1555 2.59 LINK OD1 ASP A 187 K K A 302 1555 1555 2.90 LINK OG BSER A 189 K K A 302 1555 1555 3.35 LINK FE HEM A 301 O HOH A 406 1555 1555 1.87 CRYST1 81.935 81.935 75.050 90.00 90.00 90.00 P 42 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012205 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012205 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013324 0.00000