HEADER LYASE 15-JAN-21 7BKA TITLE CRYSTAL STRUCTURE OF 3-HYDROXYDECANOYL-ACYL CARRIER PROTEIN TITLE 2 DEHYDRATASE (FABA) FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH TITLE 3 DDD01870824 COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-HYDROXYDECANOYL-[ACYL-CARRIER-PROTEIN] DEHYDRATASE; COMPND 3 CHAIN: A, B, C, D, E; COMPND 4 SYNONYM: 3-HYDROXYACYL-[ACYL-CARRIER-PROTEIN] DEHYDRATASE FABA,BETA- COMPND 5 HYDROXYDECANOYL THIOESTER DEHYDRASE,TRANS-2-DECENOYL-[ACYL-CARRIER- COMPND 6 PROTEIN] ISOMERASE; COMPND 7 EC: 4.2.1.59,5.3.3.14; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA (STRAIN ATCC 15692 / DSM SOURCE 3 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1); SOURCE 4 ORGANISM_TAXID: 208964; SOURCE 5 STRAIN: ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 SOURCE 6 / 1C / PRS 101 / PAO1; SOURCE 7 GENE: FABA, PA1610; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FABA, PA1610, COMPLEX, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR L.MOYNIE,J.H.NAISMITH REVDAT 2 31-JAN-24 7BKA 1 REMARK REVDAT 1 02-MAR-22 7BKA 0 JRNL AUTH L.MOYNIE,J.H.NAISMITH,D.A.ROBINSON JRNL TITL CRYSTAL STRUCTURES OF 3-HYDROXYDECANOYL-ACYL CARRIER PROTEIN JRNL TITL 2 DEHYDRATASE (FABA) FROM PSEUDOMONAS AERUGINOSA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.88 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.88 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.07 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 86537 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 4486 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.88 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.93 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6376 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.97 REMARK 3 BIN R VALUE (WORKING SET) : 0.3200 REMARK 3 BIN FREE R VALUE SET COUNT : 355 REMARK 3 BIN FREE R VALUE : 0.3140 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6509 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 80 REMARK 3 SOLVENT ATOMS : 180 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.99 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.54000 REMARK 3 B22 (A**2) : 0.49000 REMARK 3 B33 (A**2) : -0.51000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.34000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.127 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.116 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.095 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.433 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.956 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6736 ; 0.012 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 6301 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9108 ; 1.614 ; 1.647 REMARK 3 BOND ANGLES OTHERS (DEGREES): 14536 ; 1.367 ; 1.593 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 836 ; 7.760 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 344 ;31.751 ;21.483 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1080 ;14.478 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 47 ;14.713 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 822 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7614 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1511 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 10 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 2 171 B 2 171 5088 0.070 0.050 REMARK 3 2 A 3 171 C 3 171 5022 0.080 0.050 REMARK 3 3 A 3 171 D 3 171 5004 0.070 0.050 REMARK 3 4 A 2 171 E 2 171 5018 0.090 0.050 REMARK 3 5 B 3 171 C 3 171 5122 0.050 0.050 REMARK 3 6 B 3 171 D 3 171 5109 0.050 0.050 REMARK 3 7 B 2 170 E 2 170 5138 0.070 0.050 REMARK 3 8 C 3 171 D 3 171 5099 0.050 0.050 REMARK 3 9 C 3 171 E 3 171 5055 0.070 0.050 REMARK 3 10 D 3 171 E 3 171 5058 0.070 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7BKA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-JAN-21. REMARK 100 THE DEPOSITION ID IS D_1292113415. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-OCT-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : DIALS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 91024 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.880 REMARK 200 RESOLUTION RANGE LOW (A) : 43.070 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.88 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.91 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.24900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4CL6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, AMMONIUM SULFATE, SODIUM REMARK 280 CITRATE, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 56.83500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 71.01500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 56.83500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 71.01500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 301 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 341 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ARG A 136 REMARK 465 MET B 1 REMARK 465 MET C 1 REMARK 465 THR C 2 REMARK 465 ARG C 136 REMARK 465 SER C 137 REMARK 465 MET D 1 REMARK 465 THR D 2 REMARK 465 ARG D 136 REMARK 465 SER D 137 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OXT PHE E 171 O HOH E 301 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 38 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG B 38 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG C 38 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG D 38 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG E 38 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 74 65.16 -150.82 REMARK 500 THR A 166 -175.30 -66.55 REMARK 500 SER B 137 -78.64 -117.80 REMARK 500 ASP C 74 65.87 -150.78 REMARK 500 THR C 168 30.31 -96.92 REMARK 500 ASP E 74 65.72 -150.07 REMARK 500 SER E 137 -76.50 -118.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 4JC A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 4JC B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 4JC C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 4JC D 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS D 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 4JC E 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS E 202 DBREF 7BKA A 1 171 UNP O33877 FABA_PSEAE 1 171 DBREF 7BKA B 1 171 UNP O33877 FABA_PSEAE 1 171 DBREF 7BKA C 1 171 UNP O33877 FABA_PSEAE 1 171 DBREF 7BKA D 1 171 UNP O33877 FABA_PSEAE 1 171 DBREF 7BKA E 1 171 UNP O33877 FABA_PSEAE 1 171 SEQRES 1 A 171 MET THR LYS GLN HIS ALA PHE THR ARG GLU ASP LEU LEU SEQRES 2 A 171 ARG CYS SER ARG GLY GLU LEU PHE GLY PRO GLY ASN ALA SEQRES 3 A 171 GLN LEU PRO ALA PRO ASN MET LEU MET ILE ASP ARG ILE SEQRES 4 A 171 VAL HIS ILE SER ASP VAL GLY GLY LYS TYR GLY LYS GLY SEQRES 5 A 171 GLU LEU VAL ALA GLU LEU ASP ILE ASN PRO ASP LEU TRP SEQRES 6 A 171 PHE PHE ALA CYS HIS PHE GLU GLY ASP PRO VAL MET PRO SEQRES 7 A 171 GLY CYS LEU GLY LEU ASP ALA MET TRP GLN LEU VAL GLY SEQRES 8 A 171 PHE TYR LEU GLY TRP GLN GLY ASN PRO GLY ARG GLY ARG SEQRES 9 A 171 ALA LEU GLY SER GLY GLU VAL LYS PHE PHE GLY GLN VAL SEQRES 10 A 171 LEU PRO THR ALA LYS LYS VAL THR TYR ASN ILE HIS ILE SEQRES 11 A 171 LYS ARG THR ILE ASN ARG SER LEU VAL LEU ALA ILE ALA SEQRES 12 A 171 ASP GLY THR VAL SER VAL ASP GLY ARG GLU ILE TYR SER SEQRES 13 A 171 ALA GLU GLY LEU ARG VAL GLY LEU PHE THR SER THR ASP SEQRES 14 A 171 SER PHE SEQRES 1 B 171 MET THR LYS GLN HIS ALA PHE THR ARG GLU ASP LEU LEU SEQRES 2 B 171 ARG CYS SER ARG GLY GLU LEU PHE GLY PRO GLY ASN ALA SEQRES 3 B 171 GLN LEU PRO ALA PRO ASN MET LEU MET ILE ASP ARG ILE SEQRES 4 B 171 VAL HIS ILE SER ASP VAL GLY GLY LYS TYR GLY LYS GLY SEQRES 5 B 171 GLU LEU VAL ALA GLU LEU ASP ILE ASN PRO ASP LEU TRP SEQRES 6 B 171 PHE PHE ALA CYS HIS PHE GLU GLY ASP PRO VAL MET PRO SEQRES 7 B 171 GLY CYS LEU GLY LEU ASP ALA MET TRP GLN LEU VAL GLY SEQRES 8 B 171 PHE TYR LEU GLY TRP GLN GLY ASN PRO GLY ARG GLY ARG SEQRES 9 B 171 ALA LEU GLY SER GLY GLU VAL LYS PHE PHE GLY GLN VAL SEQRES 10 B 171 LEU PRO THR ALA LYS LYS VAL THR TYR ASN ILE HIS ILE SEQRES 11 B 171 LYS ARG THR ILE ASN ARG SER LEU VAL LEU ALA ILE ALA SEQRES 12 B 171 ASP GLY THR VAL SER VAL ASP GLY ARG GLU ILE TYR SER SEQRES 13 B 171 ALA GLU GLY LEU ARG VAL GLY LEU PHE THR SER THR ASP SEQRES 14 B 171 SER PHE SEQRES 1 C 171 MET THR LYS GLN HIS ALA PHE THR ARG GLU ASP LEU LEU SEQRES 2 C 171 ARG CYS SER ARG GLY GLU LEU PHE GLY PRO GLY ASN ALA SEQRES 3 C 171 GLN LEU PRO ALA PRO ASN MET LEU MET ILE ASP ARG ILE SEQRES 4 C 171 VAL HIS ILE SER ASP VAL GLY GLY LYS TYR GLY LYS GLY SEQRES 5 C 171 GLU LEU VAL ALA GLU LEU ASP ILE ASN PRO ASP LEU TRP SEQRES 6 C 171 PHE PHE ALA CYS HIS PHE GLU GLY ASP PRO VAL MET PRO SEQRES 7 C 171 GLY CYS LEU GLY LEU ASP ALA MET TRP GLN LEU VAL GLY SEQRES 8 C 171 PHE TYR LEU GLY TRP GLN GLY ASN PRO GLY ARG GLY ARG SEQRES 9 C 171 ALA LEU GLY SER GLY GLU VAL LYS PHE PHE GLY GLN VAL SEQRES 10 C 171 LEU PRO THR ALA LYS LYS VAL THR TYR ASN ILE HIS ILE SEQRES 11 C 171 LYS ARG THR ILE ASN ARG SER LEU VAL LEU ALA ILE ALA SEQRES 12 C 171 ASP GLY THR VAL SER VAL ASP GLY ARG GLU ILE TYR SER SEQRES 13 C 171 ALA GLU GLY LEU ARG VAL GLY LEU PHE THR SER THR ASP SEQRES 14 C 171 SER PHE SEQRES 1 D 171 MET THR LYS GLN HIS ALA PHE THR ARG GLU ASP LEU LEU SEQRES 2 D 171 ARG CYS SER ARG GLY GLU LEU PHE GLY PRO GLY ASN ALA SEQRES 3 D 171 GLN LEU PRO ALA PRO ASN MET LEU MET ILE ASP ARG ILE SEQRES 4 D 171 VAL HIS ILE SER ASP VAL GLY GLY LYS TYR GLY LYS GLY SEQRES 5 D 171 GLU LEU VAL ALA GLU LEU ASP ILE ASN PRO ASP LEU TRP SEQRES 6 D 171 PHE PHE ALA CYS HIS PHE GLU GLY ASP PRO VAL MET PRO SEQRES 7 D 171 GLY CYS LEU GLY LEU ASP ALA MET TRP GLN LEU VAL GLY SEQRES 8 D 171 PHE TYR LEU GLY TRP GLN GLY ASN PRO GLY ARG GLY ARG SEQRES 9 D 171 ALA LEU GLY SER GLY GLU VAL LYS PHE PHE GLY GLN VAL SEQRES 10 D 171 LEU PRO THR ALA LYS LYS VAL THR TYR ASN ILE HIS ILE SEQRES 11 D 171 LYS ARG THR ILE ASN ARG SER LEU VAL LEU ALA ILE ALA SEQRES 12 D 171 ASP GLY THR VAL SER VAL ASP GLY ARG GLU ILE TYR SER SEQRES 13 D 171 ALA GLU GLY LEU ARG VAL GLY LEU PHE THR SER THR ASP SEQRES 14 D 171 SER PHE SEQRES 1 E 171 MET THR LYS GLN HIS ALA PHE THR ARG GLU ASP LEU LEU SEQRES 2 E 171 ARG CYS SER ARG GLY GLU LEU PHE GLY PRO GLY ASN ALA SEQRES 3 E 171 GLN LEU PRO ALA PRO ASN MET LEU MET ILE ASP ARG ILE SEQRES 4 E 171 VAL HIS ILE SER ASP VAL GLY GLY LYS TYR GLY LYS GLY SEQRES 5 E 171 GLU LEU VAL ALA GLU LEU ASP ILE ASN PRO ASP LEU TRP SEQRES 6 E 171 PHE PHE ALA CYS HIS PHE GLU GLY ASP PRO VAL MET PRO SEQRES 7 E 171 GLY CYS LEU GLY LEU ASP ALA MET TRP GLN LEU VAL GLY SEQRES 8 E 171 PHE TYR LEU GLY TRP GLN GLY ASN PRO GLY ARG GLY ARG SEQRES 9 E 171 ALA LEU GLY SER GLY GLU VAL LYS PHE PHE GLY GLN VAL SEQRES 10 E 171 LEU PRO THR ALA LYS LYS VAL THR TYR ASN ILE HIS ILE SEQRES 11 E 171 LYS ARG THR ILE ASN ARG SER LEU VAL LEU ALA ILE ALA SEQRES 12 E 171 ASP GLY THR VAL SER VAL ASP GLY ARG GLU ILE TYR SER SEQRES 13 E 171 ALA GLU GLY LEU ARG VAL GLY LEU PHE THR SER THR ASP SEQRES 14 E 171 SER PHE HET 4JC A 201 12 HET DMS A 202 4 HET 4JC B 201 12 HET DMS B 202 4 HET 4JC C 201 12 HET DMS C 202 4 HET 4JC D 201 12 HET DMS D 202 4 HET 4JC E 201 12 HET DMS E 202 4 HETNAM 4JC 4-ETHYLBENZENESULFONAMIDE HETNAM DMS DIMETHYL SULFOXIDE FORMUL 6 4JC 5(C8 H11 N O2 S) FORMUL 7 DMS 5(C2 H6 O S) FORMUL 16 HOH *180(H2 O) HELIX 1 AA1 THR A 8 ARG A 17 1 10 HELIX 2 AA2 LEU A 64 HIS A 70 1 7 HELIX 3 AA3 PRO A 78 GLN A 97 1 20 HELIX 4 AA4 THR B 8 GLY B 18 1 11 HELIX 5 AA5 LEU B 64 HIS B 70 1 7 HELIX 6 AA6 PRO B 78 GLN B 97 1 20 HELIX 7 AA7 THR C 8 GLY C 18 1 11 HELIX 8 AA8 LEU C 64 HIS C 70 1 7 HELIX 9 AA9 PRO C 78 GLN C 97 1 20 HELIX 10 AB1 THR D 8 GLY D 18 1 11 HELIX 11 AB2 LEU D 64 HIS D 70 1 7 HELIX 12 AB3 PRO D 78 GLN D 97 1 20 HELIX 13 AB4 THR E 8 ARG E 17 1 10 HELIX 14 AB5 LEU E 64 HIS E 70 1 7 HELIX 15 AB6 PRO E 78 GLN E 97 1 20 SHEET 1 AA1 6 ARG A 38 SER A 43 0 SHEET 2 AA1 6 GLU A 53 ASP A 59 -1 O VAL A 55 N HIS A 41 SHEET 3 AA1 6 LYS A 123 ILE A 134 -1 O VAL A 124 N LEU A 58 SHEET 4 AA1 6 VAL A 139 VAL A 149 -1 O ASP A 144 N HIS A 129 SHEET 5 AA1 6 ARG A 152 PHE A 165 -1 O ILE A 154 N VAL A 147 SHEET 6 AA1 6 ARG A 102 GLY A 107 -1 N LEU A 106 O ARG A 161 SHEET 1 AA2 6 ARG A 38 SER A 43 0 SHEET 2 AA2 6 GLU A 53 ASP A 59 -1 O VAL A 55 N HIS A 41 SHEET 3 AA2 6 LYS A 123 ILE A 134 -1 O VAL A 124 N LEU A 58 SHEET 4 AA2 6 VAL A 139 VAL A 149 -1 O ASP A 144 N HIS A 129 SHEET 5 AA2 6 ARG A 152 PHE A 165 -1 O ILE A 154 N VAL A 147 SHEET 6 AA2 6 VAL A 111 PHE A 113 -1 N LYS A 112 O SER A 156 SHEET 1 AA312 ARG B 38 SER B 43 0 SHEET 2 AA312 GLU B 53 ASP B 59 -1 O VAL B 55 N HIS B 41 SHEET 3 AA312 LYS B 123 ILE B 134 -1 O VAL B 124 N LEU B 58 SHEET 4 AA312 VAL B 139 VAL B 149 -1 O ASP B 144 N HIS B 129 SHEET 5 AA312 ARG B 152 PHE B 165 -1 O ILE B 154 N VAL B 147 SHEET 6 AA312 ARG B 102 SER B 108 -1 N LEU B 106 O ARG B 161 SHEET 7 AA312 VAL C 111 PHE C 113 -1 O VAL C 111 N SER B 108 SHEET 8 AA312 ARG C 152 PHE C 165 -1 O SER C 156 N LYS C 112 SHEET 9 AA312 VAL C 139 VAL C 149 -1 N VAL C 147 O ILE C 154 SHEET 10 AA312 LYS C 123 ILE C 134 -1 N HIS C 129 O ASP C 144 SHEET 11 AA312 GLU C 53 ASP C 59 -1 N LEU C 58 O VAL C 124 SHEET 12 AA312 ARG C 38 SER C 43 -1 N HIS C 41 O VAL C 55 SHEET 1 AA412 ARG B 38 SER B 43 0 SHEET 2 AA412 GLU B 53 ASP B 59 -1 O VAL B 55 N HIS B 41 SHEET 3 AA412 LYS B 123 ILE B 134 -1 O VAL B 124 N LEU B 58 SHEET 4 AA412 VAL B 139 VAL B 149 -1 O ASP B 144 N HIS B 129 SHEET 5 AA412 ARG B 152 PHE B 165 -1 O ILE B 154 N VAL B 147 SHEET 6 AA412 VAL B 111 PHE B 113 -1 N LYS B 112 O SER B 156 SHEET 7 AA412 ARG C 102 SER C 108 -1 O SER C 108 N VAL B 111 SHEET 8 AA412 ARG C 152 PHE C 165 -1 O ARG C 161 N LEU C 106 SHEET 9 AA412 VAL C 139 VAL C 149 -1 N VAL C 147 O ILE C 154 SHEET 10 AA412 LYS C 123 ILE C 134 -1 N HIS C 129 O ASP C 144 SHEET 11 AA412 GLU C 53 ASP C 59 -1 N LEU C 58 O VAL C 124 SHEET 12 AA412 ARG C 38 SER C 43 -1 N HIS C 41 O VAL C 55 SHEET 1 AA512 ARG D 38 SER D 43 0 SHEET 2 AA512 GLU D 53 ASP D 59 -1 O VAL D 55 N HIS D 41 SHEET 3 AA512 LYS D 123 ILE D 134 -1 O VAL D 124 N LEU D 58 SHEET 4 AA512 VAL D 139 VAL D 149 -1 O ASP D 144 N HIS D 129 SHEET 5 AA512 ARG D 152 PHE D 165 -1 O ILE D 154 N VAL D 147 SHEET 6 AA512 ARG D 102 SER D 108 -1 N LEU D 106 O ARG D 161 SHEET 7 AA512 VAL E 111 PHE E 113 -1 O VAL E 111 N SER D 108 SHEET 8 AA512 ARG E 152 PHE E 165 -1 O SER E 156 N LYS E 112 SHEET 9 AA512 VAL E 139 VAL E 149 -1 N VAL E 147 O ILE E 154 SHEET 10 AA512 LYS E 123 ILE E 134 -1 N HIS E 129 O ASP E 144 SHEET 11 AA512 GLU E 53 ASP E 59 -1 N LEU E 58 O VAL E 124 SHEET 12 AA512 ARG E 38 SER E 43 -1 N HIS E 41 O VAL E 55 SHEET 1 AA612 ARG D 38 SER D 43 0 SHEET 2 AA612 GLU D 53 ASP D 59 -1 O VAL D 55 N HIS D 41 SHEET 3 AA612 LYS D 123 ILE D 134 -1 O VAL D 124 N LEU D 58 SHEET 4 AA612 VAL D 139 VAL D 149 -1 O ASP D 144 N HIS D 129 SHEET 5 AA612 ARG D 152 PHE D 165 -1 O ILE D 154 N VAL D 147 SHEET 6 AA612 VAL D 111 PHE D 113 -1 N LYS D 112 O SER D 156 SHEET 7 AA612 ARG E 102 SER E 108 -1 O SER E 108 N VAL D 111 SHEET 8 AA612 ARG E 152 PHE E 165 -1 O ARG E 161 N LEU E 106 SHEET 9 AA612 VAL E 139 VAL E 149 -1 N VAL E 147 O ILE E 154 SHEET 10 AA612 LYS E 123 ILE E 134 -1 N HIS E 129 O ASP E 144 SHEET 11 AA612 GLU E 53 ASP E 59 -1 N LEU E 58 O VAL E 124 SHEET 12 AA612 ARG E 38 SER E 43 -1 N HIS E 41 O VAL E 55 CISPEP 1 PRO A 31 ASN A 32 0 13.91 CISPEP 2 HIS A 70 PHE A 71 0 -12.20 CISPEP 3 PRO B 31 ASN B 32 0 14.14 CISPEP 4 HIS B 70 PHE B 71 0 -10.28 CISPEP 5 PRO C 31 ASN C 32 0 13.21 CISPEP 6 HIS C 70 PHE C 71 0 -10.36 CISPEP 7 PRO D 31 ASN D 32 0 14.07 CISPEP 8 HIS D 70 PHE D 71 0 -9.80 CISPEP 9 PRO E 31 ASN E 32 0 13.68 CISPEP 10 HIS E 70 PHE E 71 0 -11.08 SITE 1 AC1 13 GLN A 27 HIS A 70 PHE A 71 PRO A 78 SITE 2 AC1 13 GLY A 79 CYS A 80 ASP A 84 TRP A 87 SITE 3 AC1 13 GLN A 88 GLY A 103 ARG A 104 ALA A 105 SITE 4 AC1 13 DMS A 202 SITE 1 AC2 6 MET A 77 ARG A 104 ALA A 105 GLY A 115 SITE 2 AC2 6 PHE A 171 4JC A 201 SITE 1 AC3 13 GLN B 27 ASP B 84 TRP B 87 GLN B 88 SITE 2 AC3 13 GLY B 103 ARG B 104 ALA B 105 DMS B 202 SITE 3 AC3 13 HIS C 70 PHE C 71 PRO C 78 GLY C 79 SITE 4 AC3 13 CYS C 80 SITE 1 AC4 6 ARG B 104 ALA B 105 4JC B 201 MET C 77 SITE 2 AC4 6 PHE C 113 GLY C 115 SITE 1 AC5 12 HIS B 70 PHE B 71 PRO B 78 GLY B 79 SITE 2 AC5 12 CYS B 80 GLN C 27 ASP C 84 TRP C 87 SITE 3 AC5 12 GLN C 88 GLY C 103 ALA C 105 DMS C 202 SITE 1 AC6 5 MET B 77 GLY B 115 ARG C 104 ALA C 105 SITE 2 AC6 5 4JC C 201 SITE 1 AC7 13 GLN D 27 ASP D 84 TRP D 87 GLN D 88 SITE 2 AC7 13 GLY D 103 ARG D 104 ALA D 105 DMS D 202 SITE 3 AC7 13 HIS E 70 PHE E 71 PRO E 78 GLY E 79 SITE 4 AC7 13 CYS E 80 SITE 1 AC8 6 ARG D 104 ALA D 105 PHE D 171 4JC D 201 SITE 2 AC8 6 MET E 77 GLY E 115 SITE 1 AC9 13 HIS D 70 PHE D 71 PRO D 78 GLY D 79 SITE 2 AC9 13 CYS D 80 GLN E 27 ASP E 84 TRP E 87 SITE 3 AC9 13 GLN E 88 GLY E 103 ARG E 104 ALA E 105 SITE 4 AC9 13 DMS E 202 SITE 1 AD1 6 MET D 77 PHE D 113 GLY D 115 ARG E 104 SITE 2 AD1 6 ALA E 105 4JC E 201 CRYST1 113.670 142.030 77.900 90.00 114.14 90.00 C 1 2 1 20 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008797 0.000000 0.003943 0.00000 SCALE2 0.000000 0.007041 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014067 0.00000