HEADER IMMUNE SYSTEM 22-JAN-21 7BNP TITLE LLAMA NANOBODY NB17 RAISED AGAINST GLDL FROM FLAVOBACTERIUM JONHSONIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: NANOBODY NB17; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LAMA GLAMA; SOURCE 3 ORGANISM_COMMON: LLAMA; SOURCE 4 ORGANISM_TAXID: 9844; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS NANOBODY, TYPE IX SECRETION SYSTEM, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR N.T.TRINH,C.CAMBILLAU,P.LEONE REVDAT 3 31-JAN-24 7BNP 1 REMARK REVDAT 2 23-JUN-21 7BNP 1 JRNL REVDAT 1 26-MAY-21 7BNP 0 JRNL AUTH T.T.N.TRINH,A.GAUBERT,P.MELANI,C.CAMBILLAU,A.ROUSSEL,P.LEONE JRNL TITL CRYSTAL STRUCTURES OF TWO CAMELID NANOBODIES RAISED AGAINST JRNL TITL 2 GLDL, A COMPONENT OF THE TYPE IX SECRETION SYSTEM FROM JRNL TITL 3 FLAVOBACTERIUM JOHNSONIAE. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 77 171 2021 JRNL REFN ESSN 2053-230X JRNL PMID 34100775 JRNL DOI 10.1107/S2053230X21005185 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.4 (11-DEC-2020) REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.20 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 3 NUMBER OF REFLECTIONS : 11209 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.860 REMARK 3 FREE R VALUE TEST SET COUNT : 881 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 45 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.72 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 85.00 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 255 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.3045 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 242 REMARK 3 BIN R VALUE (WORKING SET) : 0.3073 REMARK 3 BIN FREE R VALUE : 0.2568 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.10 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 13 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 877 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 60 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.01 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.41610 REMARK 3 B22 (A**2) : -3.60200 REMARK 3 B33 (A**2) : 5.01810 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -4.98540 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.240 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.132 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.113 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.130 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.113 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 904 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 1224 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 298 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 157 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 904 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 110 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 728 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 0.95 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.50 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 16.04 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 20 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|2 - A|9 } REMARK 3 ORIGIN FOR THE GROUP (A): 26.2167 0.3616 13.3380 REMARK 3 T TENSOR REMARK 3 T11: -0.0483 T22: 0.0948 REMARK 3 T33: 0.0479 T12: 0.0611 REMARK 3 T13: -0.0136 T23: 0.0517 REMARK 3 L TENSOR REMARK 3 L11: 5.9540 L22: 0.8525 REMARK 3 L33: 5.6058 L12: 0.1007 REMARK 3 L13: 3.8162 L23: -1.9042 REMARK 3 S TENSOR REMARK 3 S11: -0.1582 S12: -0.4902 S13: -0.2965 REMARK 3 S21: -0.0335 S22: 0.0862 S23: -0.1608 REMARK 3 S31: -0.2625 S32: 0.4076 S33: 0.0720 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { A|10 - A|16 } REMARK 3 ORIGIN FOR THE GROUP (A): 12.5367 -1.3032 -3.9755 REMARK 3 T TENSOR REMARK 3 T11: -0.0158 T22: 0.0303 REMARK 3 T33: 0.0255 T12: -0.0444 REMARK 3 T13: 0.0027 T23: -0.0036 REMARK 3 L TENSOR REMARK 3 L11: 3.4784 L22: 3.7562 REMARK 3 L33: 0.3883 L12: 2.7906 REMARK 3 L13: -0.1301 L23: 0.8341 REMARK 3 S TENSOR REMARK 3 S11: -0.0932 S12: 0.1241 S13: -0.0373 REMARK 3 S21: 0.0322 S22: 0.0939 S23: -0.0317 REMARK 3 S31: 0.1418 S32: -0.2614 S33: -0.0007 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { A|17 - A|24 } REMARK 3 ORIGIN FOR THE GROUP (A): 20.2238 -4.9525 8.9016 REMARK 3 T TENSOR REMARK 3 T11: 0.0106 T22: -0.0178 REMARK 3 T33: 0.0680 T12: 0.0614 REMARK 3 T13: 0.0200 T23: 0.0815 REMARK 3 L TENSOR REMARK 3 L11: 4.9713 L22: 0.0716 REMARK 3 L33: 5.8656 L12: -0.1173 REMARK 3 L13: 3.3350 L23: -2.1116 REMARK 3 S TENSOR REMARK 3 S11: -0.2384 S12: -0.3191 S13: -0.5727 REMARK 3 S21: -0.0879 S22: 0.0659 S23: -0.1834 REMARK 3 S31: 0.2225 S32: 0.0360 S33: 0.1725 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { A|31 - A|34 } REMARK 3 ORIGIN FOR THE GROUP (A): 20.0588 -1.6980 25.7955 REMARK 3 T TENSOR REMARK 3 T11: 0.3207 T22: 0.3040 REMARK 3 T33: -0.0294 T12: 0.1125 REMARK 3 T13: 0.0326 T23: 0.1408 REMARK 3 L TENSOR REMARK 3 L11: 7.2119 L22: 8.3154 REMARK 3 L33: 9.4190 L12: -3.6956 REMARK 3 L13: 1.4248 L23: 1.8121 REMARK 3 S TENSOR REMARK 3 S11: -0.0564 S12: -0.6911 S13: 0.7109 REMARK 3 S21: 0.2862 S22: 0.5430 S23: -0.4773 REMARK 3 S31: -0.3776 S32: 0.3389 S33: -0.4866 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: { A|35 - A|40 } REMARK 3 ORIGIN FOR THE GROUP (A): 14.1465 5.1026 12.1336 REMARK 3 T TENSOR REMARK 3 T11: 0.0095 T22: 0.0204 REMARK 3 T33: -0.0326 T12: 0.0744 REMARK 3 T13: 0.0015 T23: 0.0152 REMARK 3 L TENSOR REMARK 3 L11: 3.7057 L22: 0.3533 REMARK 3 L33: 3.1693 L12: -0.1212 REMARK 3 L13: -0.4455 L23: 2.1378 REMARK 3 S TENSOR REMARK 3 S11: -0.0394 S12: -0.4405 S13: 0.0281 REMARK 3 S21: 0.2420 S22: 0.0283 S23: 0.2084 REMARK 3 S31: -0.2871 S32: -0.3027 S33: 0.0111 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: { A|41 - A|45 } REMARK 3 ORIGIN FOR THE GROUP (A): 11.5714 13.2404 9.9985 REMARK 3 T TENSOR REMARK 3 T11: 0.0935 T22: -0.0093 REMARK 3 T33: -0.0238 T12: 0.1640 REMARK 3 T13: -0.0141 T23: -0.0098 REMARK 3 L TENSOR REMARK 3 L11: 5.1240 L22: 8.3154 REMARK 3 L33: 3.0836 L12: 2.4663 REMARK 3 L13: 2.2795 L23: -2.1911 REMARK 3 S TENSOR REMARK 3 S11: 0.2505 S12: -0.3644 S13: 0.4173 REMARK 3 S21: 0.1957 S22: 0.1300 S23: 0.3653 REMARK 3 S31: -0.3433 S32: 0.1210 S33: -0.3805 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: { A|46 - A|52 } REMARK 3 ORIGIN FOR THE GROUP (A): 11.7280 0.2209 17.6861 REMARK 3 T TENSOR REMARK 3 T11: 0.0137 T22: 0.0681 REMARK 3 T33: -0.0720 T12: 0.0255 REMARK 3 T13: 0.0762 T23: 0.0678 REMARK 3 L TENSOR REMARK 3 L11: 0.7944 L22: 8.3154 REMARK 3 L33: 2.8953 L12: 0.0104 REMARK 3 L13: -1.6565 L23: 2.4323 REMARK 3 S TENSOR REMARK 3 S11: 0.0787 S12: -0.3819 S13: 0.0711 REMARK 3 S21: 0.4016 S22: -0.3189 S23: 0.4684 REMARK 3 S31: 0.2040 S32: -0.5653 S33: 0.2402 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): 14.0486 -8.7924 24.8759 REMARK 3 T TENSOR REMARK 3 T11: 0.2518 T22: 0.2568 REMARK 3 T33: 0.0871 T12: 0.0946 REMARK 3 T13: 0.1133 T23: 0.1930 REMARK 3 L TENSOR REMARK 3 L11: 3.6439 L22: 1.4222 REMARK 3 L33: -0.3185 L12: -1.8215 REMARK 3 L13: -2.1468 L23: -3.6681 REMARK 3 S TENSOR REMARK 3 S11: 0.0361 S12: -0.2470 S13: -0.0555 REMARK 3 S21: 0.4500 S22: 0.4485 S23: -0.4213 REMARK 3 S31: 0.2628 S32: 0.4372 S33: -0.4847 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: { A|58 - A|62 } REMARK 3 ORIGIN FOR THE GROUP (A): 5.0437 -0.8745 15.6454 REMARK 3 T TENSOR REMARK 3 T11: -0.0881 T22: 0.1111 REMARK 3 T33: -0.0144 T12: 0.0080 REMARK 3 T13: 0.1197 T23: -0.0367 REMARK 3 L TENSOR REMARK 3 L11: 8.0396 L22: 5.1703 REMARK 3 L33: 8.5913 L12: -2.8053 REMARK 3 L13: 0.3561 L23: -0.7912 REMARK 3 S TENSOR REMARK 3 S11: -0.1074 S12: -0.3239 S13: 0.0699 REMARK 3 S21: 0.3724 S22: -0.5270 S23: 0.5875 REMARK 3 S31: -0.0010 S32: -0.6859 S33: 0.6344 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: { A|63 - A|67 } REMARK 3 ORIGIN FOR THE GROUP (A): 5.3840 -3.7644 9.3563 REMARK 3 T TENSOR REMARK 3 T11: -0.0717 T22: 0.1111 REMARK 3 T33: 0.0151 T12: -0.0094 REMARK 3 T13: 0.0642 T23: 0.0384 REMARK 3 L TENSOR REMARK 3 L11: 4.8639 L22: 6.8512 REMARK 3 L33: 3.5747 L12: -3.6370 REMARK 3 L13: -0.9341 L23: 1.6406 REMARK 3 S TENSOR REMARK 3 S11: 0.1048 S12: 0.1572 S13: -0.5155 REMARK 3 S21: 0.4212 S22: -0.3604 S23: 0.0712 REMARK 3 S31: -0.1309 S32: -0.5214 S33: 0.2555 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: { A|68 - A|72 } REMARK 3 ORIGIN FOR THE GROUP (A): 16.5519 -9.2554 16.1713 REMARK 3 T TENSOR REMARK 3 T11: 0.1171 T22: 0.0050 REMARK 3 T33: 0.0508 T12: 0.0309 REMARK 3 T13: 0.0540 T23: 0.1369 REMARK 3 L TENSOR REMARK 3 L11: 6.4789 L22: 8.3154 REMARK 3 L33: 9.6331 L12: 3.6956 REMARK 3 L13: 2.4598 L23: -1.8121 REMARK 3 S TENSOR REMARK 3 S11: 0.0069 S12: -0.5160 S13: -0.5421 REMARK 3 S21: 0.6706 S22: -0.0084 S23: -0.3458 REMARK 3 S31: 0.5464 S32: 0.2217 S33: 0.0015 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: { A|73 - A|78 } REMARK 3 ORIGIN FOR THE GROUP (A): 24.4792 -10.1195 17.5122 REMARK 3 T TENSOR REMARK 3 T11: 0.2181 T22: 0.2287 REMARK 3 T33: 0.1781 T12: 0.1026 REMARK 3 T13: -0.0519 T23: 0.1696 REMARK 3 L TENSOR REMARK 3 L11: 8.2653 L22: 8.3154 REMARK 3 L33: 0.0502 L12: -1.8121 REMARK 3 L13: 1.4866 L23: -3.6956 REMARK 3 S TENSOR REMARK 3 S11: 0.0972 S12: -0.6911 S13: -0.5259 REMARK 3 S21: 0.6911 S22: -0.1470 S23: -0.3389 REMARK 3 S31: 0.5626 S32: 0.3389 S33: 0.0498 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): 13.4486 -6.4852 7.6410 REMARK 3 T TENSOR REMARK 3 T11: 0.0134 T22: -0.0340 REMARK 3 T33: 0.0493 T12: -0.0119 REMARK 3 T13: 0.0280 T23: 0.0547 REMARK 3 L TENSOR REMARK 3 L11: 6.0377 L22: 0.1011 REMARK 3 L33: 5.8605 L12: 1.5339 REMARK 3 L13: 3.7500 L23: 0.4871 REMARK 3 S TENSOR REMARK 3 S11: -0.3957 S12: -0.0454 S13: -0.4247 REMARK 3 S21: 0.1032 S22: 0.1894 S23: 0.1139 REMARK 3 S31: 0.3524 S32: -0.2774 S33: 0.2063 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): 6.6025 2.2460 1.8133 REMARK 3 T TENSOR REMARK 3 T11: -0.0677 T22: 0.0877 REMARK 3 T33: 0.0443 T12: 0.0493 REMARK 3 T13: -0.0089 T23: 0.0076 REMARK 3 L TENSOR REMARK 3 L11: 6.3672 L22: 8.3154 REMARK 3 L33: 1.9088 L12: 1.7921 REMARK 3 L13: 3.8666 L23: -0.0246 REMARK 3 S TENSOR REMARK 3 S11: -0.3792 S12: -0.3389 S13: -0.0446 REMARK 3 S21: 0.0381 S22: 0.1748 S23: 0.5145 REMARK 3 S31: -0.0907 S32: -0.6911 S33: 0.2044 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: { A|87 - A|92 } REMARK 3 ORIGIN FOR THE GROUP (A): 16.4613 5.5493 8.4406 REMARK 3 T TENSOR REMARK 3 T11: 0.0286 T22: -0.0260 REMARK 3 T33: -0.0011 T12: 0.0631 REMARK 3 T13: -0.0047 T23: 0.0239 REMARK 3 L TENSOR REMARK 3 L11: 4.0412 L22: 0.0000 REMARK 3 L33: 3.8547 L12: 0.7065 REMARK 3 L13: 2.3603 L23: 0.1751 REMARK 3 S TENSOR REMARK 3 S11: -0.0241 S12: -0.1139 S13: -0.0274 REMARK 3 S21: 0.0465 S22: -0.0632 S23: 0.1145 REMARK 3 S31: -0.2181 S32: -0.1243 S33: 0.0873 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: { A|93 - A|99 } REMARK 3 ORIGIN FOR THE GROUP (A): 18.3274 3.8289 25.7583 REMARK 3 T TENSOR REMARK 3 T11: 0.1191 T22: 0.2414 REMARK 3 T33: -0.1202 T12: 0.0600 REMARK 3 T13: 0.0299 T23: 0.0624 REMARK 3 L TENSOR REMARK 3 L11: 0.7587 L22: 0.0148 REMARK 3 L33: 1.0400 L12: -0.9542 REMARK 3 L13: -1.2870 L23: -3.4022 REMARK 3 S TENSOR REMARK 3 S11: 0.0018 S12: -0.4759 S13: -0.0731 REMARK 3 S21: 0.4069 S22: 0.0649 S23: 0.3230 REMARK 3 S31: 0.0889 S32: 0.1234 S33: -0.0667 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): 10.6031 7.7391 32.2212 REMARK 3 T TENSOR REMARK 3 T11: 0.0779 T22: 0.1842 REMARK 3 T33: -0.0735 T12: -0.1666 REMARK 3 T13: -0.0133 T23: 0.0174 REMARK 3 L TENSOR REMARK 3 L11: 10.0977 L22: 5.1445 REMARK 3 L33: 6.5332 L12: -1.8121 REMARK 3 L13: -2.3009 L23: -3.6956 REMARK 3 S TENSOR REMARK 3 S11: -0.0430 S12: -0.3741 S13: 0.6280 REMARK 3 S21: -0.1839 S22: 0.2706 S23: 0.3017 REMARK 3 S31: -0.2412 S32: -0.1000 S33: -0.2276 REMARK 3 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): 1.8456 7.0646 36.6173 REMARK 3 T TENSOR REMARK 3 T11: 0.0258 T22: 0.1295 REMARK 3 T33: -0.0734 T12: 0.0069 REMARK 3 T13: -0.0203 T23: -0.0235 REMARK 3 L TENSOR REMARK 3 L11: -1.6588 L22: 0.6662 REMARK 3 L33: 2.8377 L12: -3.6761 REMARK 3 L13: 1.9400 L23: 1.7550 REMARK 3 S TENSOR REMARK 3 S11: 0.2738 S12: 0.5016 S13: -0.1133 REMARK 3 S21: 0.0337 S22: -0.3065 S23: 0.0150 REMARK 3 S31: -0.0836 S32: -0.4035 S33: 0.0327 REMARK 3 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: { A|111 - A|116 } REMARK 3 ORIGIN FOR THE GROUP (A): 7.1532 4.5392 52.9219 REMARK 3 T TENSOR REMARK 3 T11: 0.0285 T22: -0.0558 REMARK 3 T33: 0.0137 T12: -0.0152 REMARK 3 T13: -0.0036 T23: -0.0191 REMARK 3 L TENSOR REMARK 3 L11: 6.8379 L22: 0.0000 REMARK 3 L33: 6.2870 L12: 0.4841 REMARK 3 L13: 2.5071 L23: -0.5362 REMARK 3 S TENSOR REMARK 3 S11: -0.1989 S12: 0.0590 S13: 0.1380 REMARK 3 S21: -0.0100 S22: 0.0647 S23: -0.1246 REMARK 3 S31: -0.2998 S32: 0.0019 S33: 0.1342 REMARK 3 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: { A|117 - A|119 } REMARK 3 ORIGIN FOR THE GROUP (A): 17.1841 1.3554 62.8493 REMARK 3 T TENSOR REMARK 3 T11: -0.0377 T22: 0.1810 REMARK 3 T33: 0.1122 T12: 0.0211 REMARK 3 T13: -0.0295 T23: 0.0154 REMARK 3 L TENSOR REMARK 3 L11: -1.1305 L22: 0.0000 REMARK 3 L33: 1.8584 L12: -1.8121 REMARK 3 L13: 2.5238 L23: -3.6956 REMARK 3 S TENSOR REMARK 3 S11: -0.1339 S12: -0.4491 S13: -0.2312 REMARK 3 S21: 0.2900 S22: 0.1164 S23: -0.4760 REMARK 3 S31: 0.4772 S32: 0.4216 S33: 0.0175 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7BNP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-JAN-21. REMARK 100 THE DEPOSITION ID IS D_1292113632. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-JAN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11641 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.670 REMARK 200 RESOLUTION RANGE LOW (A) : 30.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.0 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.67 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1KXQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM TRIS PH 8.5, 25% PEG 3350, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 21.35300 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 22.73550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 21.35300 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 22.73550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 23.90559 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 54.97413 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -1 REMARK 465 ALA A 0 REMARK 465 GLN A 1 REMARK 465 SER A 25 REMARK 465 GLY A 26 REMARK 465 ARG A 27 REMARK 465 THR A 28 REMARK 465 PHE A 29 REMARK 465 ARG A 30 REMARK 465 HIS A 115 REMARK 465 HIS A 116 REMARK 465 HIS A 117 REMARK 465 HIS A 118 REMARK 465 HIS A 119 DBREF 7BNP A -1 119 PDB 7BNP 7BNP -1 119 SEQRES 1 A 130 MET ALA GLN VAL GLN LEU VAL GLU SER GLY GLY GLY LEU SEQRES 2 A 130 VAL GLN ALA GLY GLY SER LEU ARG LEU SER CYS ALA ALA SEQRES 3 A 130 SER GLY ARG THR PHE ARG ASN TYR TYR MET GLY TRP PHE SEQRES 4 A 130 ARG GLN ALA PRO GLY LYS GLU ARG ASP ILE VAL ALA ALA SEQRES 5 A 130 ILE SER TRP SER GLY GLY SER THR TYR TYR ALA ASP SER SEQRES 6 A 130 VAL LYS GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS SEQRES 7 A 130 ASN THR VAL TYR LEU GLN MET ASN SER LEU LYS PRO GLU SEQRES 8 A 130 ASP THR ALA VAL TYR TYR CYS ASN ALA ARG SER GLY GLY SEQRES 9 A 130 SER ALA TRP GLN GLY ASP PHE GLY SER TRP GLY GLN GLY SEQRES 10 A 130 THR GLN VAL THR VAL SER SER HIS HIS HIS HIS HIS HIS FORMUL 2 HOH *60(H2 O) HELIX 1 AA1 ASN A 73 LYS A 75 5 3 HELIX 2 AA2 LYS A 83 THR A 87 5 5 HELIX 3 AA3 SER A 96 TRP A 100A 1 6 SHEET 1 AA1 4 VAL A 5 SER A 7 0 SHEET 2 AA1 4 LEU A 18 ALA A 23 -1 O ALA A 23 N VAL A 5 SHEET 3 AA1 4 THR A 77 MET A 82 -1 O MET A 82 N LEU A 18 SHEET 4 AA1 4 PHE A 67 ASP A 72 -1 N THR A 68 O GLN A 81 SHEET 1 AA2 4 THR A 57 TYR A 59 0 SHEET 2 AA2 4 ARG A 45 ILE A 51 -1 N ALA A 50 O TYR A 58 SHEET 3 AA2 4 TYR A 33 GLN A 39 -1 N TRP A 36 O ALA A 49 SHEET 4 AA2 4 VAL A 89 ARG A 95 -1 O TYR A 91 N PHE A 37 SSBOND 1 CYS A 22 CYS A 92 1555 1555 2.06 CRYST1 42.706 45.471 58.100 90.00 108.88 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023416 0.000000 0.008008 0.00000 SCALE2 0.000000 0.021992 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018190 0.00000