HEADER VIRAL PROTEIN 22-JAN-21 7BNY TITLE STRUCTURE OF 2A PROTEIN FROM ENCEPHALOMYOCARDITIS VIRUS (EMCV) COMPND MOL_ID: 1; COMPND 2 MOLECULE: GENOME POLYPROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 3.6.4.13,3.4.22.28,2.7.7.48; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MENGO ENCEPHALOMYOCARDITIS VIRUS; SOURCE 3 ORGANISM_TAXID: 12107; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_VARIANT: PLYSS; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: POPTNH KEYWDS EMCV, CARDIOVIRUS, 2A, PICORNAVIRUS, FRAMESHIFTING, PRF, RNA-BINDING KEYWDS 2 PROTEIN, PROTEIN-MEDIATED FRAMESHIFTING, RIBOSOME-BINDING PROTEIN, KEYWDS 3 BETA-SHELL, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.H.HILL,S.NAPTHINE,L.PEKAREK,A.KIBE,A.E.FIRTH,S.C.GRAHAM,N.CALISKAN, AUTHOR 2 I.BRIERLEY REVDAT 2 02-FEB-22 7BNY 1 JRNL REVDAT 1 08-DEC-21 7BNY 0 JRNL AUTH C.H.HILL,L.PEKAREK,S.NAPTHINE,A.KIBE,A.E.FIRTH,S.C.GRAHAM, JRNL AUTH 2 N.CALISKAN,I.BRIERLEY JRNL TITL STRUCTURAL AND MOLECULAR BASIS FOR CARDIOVIRUS 2A PROTEIN AS JRNL TITL 2 A VIRAL GENE EXPRESSION SWITCH. JRNL REF NAT COMMUN V. 12 7166 2021 JRNL REFN ESSN 2041-1723 JRNL PMID 34887415 JRNL DOI 10.1038/S41467-021-27400-7 REMARK 2 REMARK 2 RESOLUTION. 2.62 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.1_3865 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.62 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.91 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 24568 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.910 REMARK 3 FREE R VALUE TEST SET COUNT : 1207 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.9100 - 5.4500 1.00 2858 157 0.2330 0.2557 REMARK 3 2 5.4500 - 4.3300 1.00 2661 128 0.1797 0.2007 REMARK 3 3 4.3200 - 3.7800 1.00 2599 141 0.1897 0.2257 REMARK 3 4 3.7800 - 3.4300 1.00 2585 138 0.2121 0.2537 REMARK 3 5 3.4300 - 3.1900 1.00 2565 129 0.2333 0.2155 REMARK 3 6 3.1900 - 3.0000 1.00 2545 129 0.2731 0.3056 REMARK 3 7 3.0000 - 2.8500 0.99 2515 127 0.3080 0.3762 REMARK 3 8 2.8500 - 2.7300 0.99 2534 125 0.3262 0.3430 REMARK 3 9 2.7300 - 2.6200 0.99 2499 133 0.3404 0.3703 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.352 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.502 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 54.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 75.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 4582 REMARK 3 ANGLE : 0.741 6235 REMARK 3 CHIRALITY : 0.047 658 REMARK 3 PLANARITY : 0.007 785 REMARK 3 DIHEDRAL : 25.610 1656 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 10 THROUGH 143) REMARK 3 ORIGIN FOR THE GROUP (A): 77.3140 5.2354 40.9534 REMARK 3 T TENSOR REMARK 3 T11: 0.2912 T22: 0.4000 REMARK 3 T33: 0.4151 T12: 0.0237 REMARK 3 T13: -0.0792 T23: -0.0165 REMARK 3 L TENSOR REMARK 3 L11: 3.2790 L22: 3.1973 REMARK 3 L33: 6.4290 L12: -0.2610 REMARK 3 L13: -0.2829 L23: -0.1519 REMARK 3 S TENSOR REMARK 3 S11: -0.0760 S12: -0.0025 S13: 0.0794 REMARK 3 S21: -0.1124 S22: -0.0968 S23: 0.3591 REMARK 3 S31: -0.1649 S32: -0.6769 S33: 0.1314 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'B' AND RESID 2 THROUGH 140) REMARK 3 ORIGIN FOR THE GROUP (A): 54.1806 -21.9876 9.9598 REMARK 3 T TENSOR REMARK 3 T11: 0.3311 T22: 0.5903 REMARK 3 T33: 0.4167 T12: -0.0591 REMARK 3 T13: 0.0307 T23: 0.0377 REMARK 3 L TENSOR REMARK 3 L11: 2.5499 L22: 4.4578 REMARK 3 L33: 3.8987 L12: -1.1478 REMARK 3 L13: -0.1508 L23: -0.9767 REMARK 3 S TENSOR REMARK 3 S11: -0.0386 S12: -0.1160 S13: 0.0691 REMARK 3 S21: 0.0232 S22: -0.0434 S23: -0.0353 REMARK 3 S31: 0.3723 S32: -0.1831 S33: 0.0685 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN 'C' AND RESID 12 THROUGH 137) REMARK 3 ORIGIN FOR THE GROUP (A): 49.5255 -28.4057 36.5586 REMARK 3 T TENSOR REMARK 3 T11: 0.6519 T22: 0.7313 REMARK 3 T33: 0.3834 T12: -0.1970 REMARK 3 T13: 0.0169 T23: 0.0946 REMARK 3 L TENSOR REMARK 3 L11: 5.7849 L22: 4.6661 REMARK 3 L33: 4.3621 L12: -0.7303 REMARK 3 L13: -0.7820 L23: -1.0663 REMARK 3 S TENSOR REMARK 3 S11: 0.0249 S12: -0.7666 S13: -0.3872 REMARK 3 S21: 0.1606 S22: -0.1750 S23: -0.1433 REMARK 3 S31: 0.5553 S32: 0.0167 S33: 0.1247 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN 'D' AND RESID 12 THROUGH 137) REMARK 3 ORIGIN FOR THE GROUP (A): 71.0127 15.5507 16.7582 REMARK 3 T TENSOR REMARK 3 T11: 0.2979 T22: 0.6264 REMARK 3 T33: 0.4602 T12: -0.0943 REMARK 3 T13: -0.0740 T23: 0.1411 REMARK 3 L TENSOR REMARK 3 L11: 5.0919 L22: 4.6618 REMARK 3 L33: 4.3102 L12: -0.8472 REMARK 3 L13: -0.2783 L23: -0.1282 REMARK 3 S TENSOR REMARK 3 S11: 0.0635 S12: 0.2922 S13: -0.0563 REMARK 3 S21: 0.0323 S22: -0.2427 S23: -0.4309 REMARK 3 S31: -0.2532 S32: 0.6025 S33: 0.1575 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "A" and (resid 12 through 27 or REMARK 3 resid 29 through 31 or resid 35 through REMARK 3 80 or resid 82 through 94 or resid 96 REMARK 3 through 104 or resid 106 through 115 or REMARK 3 resid 117 through 128 or resid 130 or REMARK 3 resid 133 through 136)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "C" and (resid 12 through 27 or REMARK 3 resid 29 through 31 or resid 35 through REMARK 3 80 or resid 82 through 94 or resid 96 REMARK 3 through 104 or resid 106 through 115 or REMARK 3 resid 117 through 128 or resid 130 or REMARK 3 resid 133 through 136)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 3 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "D" and (resid 12 through 27 or REMARK 3 resid 29 through 31 or resid 35 through REMARK 3 80 or resid 82 through 94 or resid 96 REMARK 3 through 104 or resid 106 through 115 or REMARK 3 resid 117 through 128 or resid 130 or REMARK 3 resid 133 through 136)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7BNY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-JAN-21. REMARK 100 THE DEPOSITION ID IS D_1292113619. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JUN-18; 21-SEP-18 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 5.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : DIAMOND; DIAMOND REMARK 200 BEAMLINE : I03; I04 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97958; 0.97635, 0.97965, REMARK 200 0.97974 REMARK 200 MONOCHROMATOR : DOUBLE-CRYSTAL; DOUBLE-CRYSTAL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL; PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M; DECTRIS REMARK 200 PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2, XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24668 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.620 REMARK 200 RESOLUTION RANGE LOW (A) : 43.910 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 18.90 REMARK 200 R MERGE (I) : 0.22700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.62 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.67 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 19.40 REMARK 200 R MERGE FOR SHELL (I) : 2.76600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.97 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PURIFIED EMCV 2A WAS CONCENTRATED TO REMARK 280 5.9 MG/ML IN 10 MM HEPES PH 7.9, 1.0 M NACL, 2.0 MM DTT DROPS REMARK 280 WERE PREPARED BY MIXING 200 NL PROTEIN AND 200 NL REMARK 280 CRYSTALLIZATION BUFFER: 0.625 M AMMONIUM SULFATE, 0.15 M TRI- REMARK 280 SODIUM CITRATE PH 5.7, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 210.92667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 105.46333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 210.92667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 105.46333 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 210.92667 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 105.46333 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 210.92667 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 105.46333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B1134 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 PRO A 2 REMARK 465 ASN A 3 REMARK 465 PRO A 4 REMARK 465 LEU A 5 REMARK 465 ASP A 6 REMARK 465 VAL A 7 REMARK 465 SER A 8 REMARK 465 LYS A 9 REMARK 465 PRO A 142 REMARK 465 GLY A 143 REMARK 465 GLY A 144 REMARK 465 SER A 145 REMARK 465 LYS A 146 REMARK 465 HIS A 147 REMARK 465 HIS A 148 REMARK 465 HIS A 149 REMARK 465 HIS A 150 REMARK 465 HIS A 151 REMARK 465 HIS A 152 REMARK 465 SER B 1 REMARK 465 PRO B 142 REMARK 465 GLY B 143 REMARK 465 GLY B 144 REMARK 465 SER B 145 REMARK 465 LYS B 146 REMARK 465 HIS B 147 REMARK 465 HIS B 148 REMARK 465 HIS B 149 REMARK 465 HIS B 150 REMARK 465 HIS B 151 REMARK 465 HIS B 152 REMARK 465 SER C 1 REMARK 465 PRO C 2 REMARK 465 ASN C 3 REMARK 465 PRO C 4 REMARK 465 LEU C 5 REMARK 465 ASP C 6 REMARK 465 VAL C 7 REMARK 465 SER C 8 REMARK 465 LYS C 9 REMARK 465 THR C 10 REMARK 465 TYR C 11 REMARK 465 VAL C 138 REMARK 465 GLU C 139 REMARK 465 THR C 140 REMARK 465 ASN C 141 REMARK 465 PRO C 142 REMARK 465 GLY C 143 REMARK 465 GLY C 144 REMARK 465 SER C 145 REMARK 465 LYS C 146 REMARK 465 HIS C 147 REMARK 465 HIS C 148 REMARK 465 HIS C 149 REMARK 465 HIS C 150 REMARK 465 HIS C 151 REMARK 465 HIS C 152 REMARK 465 SER D 1 REMARK 465 PRO D 2 REMARK 465 ASN D 3 REMARK 465 PRO D 4 REMARK 465 LEU D 5 REMARK 465 ASP D 6 REMARK 465 VAL D 7 REMARK 465 SER D 8 REMARK 465 LYS D 9 REMARK 465 THR D 10 REMARK 465 TYR D 11 REMARK 465 VAL D 138 REMARK 465 GLU D 139 REMARK 465 THR D 140 REMARK 465 ASN D 141 REMARK 465 PRO D 142 REMARK 465 GLY D 143 REMARK 465 GLY D 144 REMARK 465 SER D 145 REMARK 465 LYS D 146 REMARK 465 HIS D 147 REMARK 465 HIS D 148 REMARK 465 HIS D 149 REMARK 465 HIS D 150 REMARK 465 HIS D 151 REMARK 465 HIS D 152 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD1 ASP B 6 OE2 GLU B 139 8555 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 94 -70.61 67.16 REMARK 500 TYR A 126 45.01 -95.07 REMARK 500 LEU B 5 19.99 57.82 REMARK 500 LYS B 94 -63.08 55.63 REMARK 500 PHE B 99 -4.14 62.29 REMARK 500 LYS C 94 -56.09 60.61 REMARK 500 ARG C 95 137.32 -171.57 REMARK 500 GLU C 113 -54.90 -128.88 REMARK 500 PHE C 130 72.53 -105.58 REMARK 500 HIS D 32 -133.89 55.61 REMARK 500 LYS D 94 -65.02 63.29 REMARK 500 REMARK 500 REMARK: NULL DBREF 7BNY A 1 143 UNP P12296 POLG_ENMGO 902 1044 DBREF 7BNY B 1 143 UNP P12296 POLG_ENMGO 902 1044 DBREF 7BNY C 1 143 UNP P12296 POLG_ENMGO 902 1044 DBREF 7BNY D 1 143 UNP P12296 POLG_ENMGO 902 1044 SEQADV 7BNY GLY A 144 UNP P12296 EXPRESSION TAG SEQADV 7BNY SER A 145 UNP P12296 EXPRESSION TAG SEQADV 7BNY LYS A 146 UNP P12296 EXPRESSION TAG SEQADV 7BNY HIS A 147 UNP P12296 EXPRESSION TAG SEQADV 7BNY HIS A 148 UNP P12296 EXPRESSION TAG SEQADV 7BNY HIS A 149 UNP P12296 EXPRESSION TAG SEQADV 7BNY HIS A 150 UNP P12296 EXPRESSION TAG SEQADV 7BNY HIS A 151 UNP P12296 EXPRESSION TAG SEQADV 7BNY HIS A 152 UNP P12296 EXPRESSION TAG SEQADV 7BNY GLY B 144 UNP P12296 EXPRESSION TAG SEQADV 7BNY SER B 145 UNP P12296 EXPRESSION TAG SEQADV 7BNY LYS B 146 UNP P12296 EXPRESSION TAG SEQADV 7BNY HIS B 147 UNP P12296 EXPRESSION TAG SEQADV 7BNY HIS B 148 UNP P12296 EXPRESSION TAG SEQADV 7BNY HIS B 149 UNP P12296 EXPRESSION TAG SEQADV 7BNY HIS B 150 UNP P12296 EXPRESSION TAG SEQADV 7BNY HIS B 151 UNP P12296 EXPRESSION TAG SEQADV 7BNY HIS B 152 UNP P12296 EXPRESSION TAG SEQADV 7BNY GLY C 144 UNP P12296 EXPRESSION TAG SEQADV 7BNY SER C 145 UNP P12296 EXPRESSION TAG SEQADV 7BNY LYS C 146 UNP P12296 EXPRESSION TAG SEQADV 7BNY HIS C 147 UNP P12296 EXPRESSION TAG SEQADV 7BNY HIS C 148 UNP P12296 EXPRESSION TAG SEQADV 7BNY HIS C 149 UNP P12296 EXPRESSION TAG SEQADV 7BNY HIS C 150 UNP P12296 EXPRESSION TAG SEQADV 7BNY HIS C 151 UNP P12296 EXPRESSION TAG SEQADV 7BNY HIS C 152 UNP P12296 EXPRESSION TAG SEQADV 7BNY GLY D 144 UNP P12296 EXPRESSION TAG SEQADV 7BNY SER D 145 UNP P12296 EXPRESSION TAG SEQADV 7BNY LYS D 146 UNP P12296 EXPRESSION TAG SEQADV 7BNY HIS D 147 UNP P12296 EXPRESSION TAG SEQADV 7BNY HIS D 148 UNP P12296 EXPRESSION TAG SEQADV 7BNY HIS D 149 UNP P12296 EXPRESSION TAG SEQADV 7BNY HIS D 150 UNP P12296 EXPRESSION TAG SEQADV 7BNY HIS D 151 UNP P12296 EXPRESSION TAG SEQADV 7BNY HIS D 152 UNP P12296 EXPRESSION TAG SEQRES 1 A 152 SER PRO ASN PRO LEU ASP VAL SER LYS THR TYR PRO THR SEQRES 2 A 152 LEU HIS ILE LEU LEU GLN PHE ASN HIS ARG GLY LEU GLU SEQRES 3 A 152 ALA ARG ILE PHE ARG HIS GLY GLN LEU TRP ALA GLU THR SEQRES 4 A 152 HIS ALA GLU VAL VAL LEU ARG SER LYS THR LYS GLN ILE SEQRES 5 A 152 SER PHE LEU SER ASN GLY SER TYR PRO SER MET ASP ALA SEQRES 6 A 152 THR THR PRO LEU ASN PRO TRP LYS SER THR TYR GLN ALA SEQRES 7 A 152 VAL LEU ARG ALA GLU PRO HIS ARG VAL THR MET ASP VAL SEQRES 8 A 152 TYR HIS LYS ARG ILE ARG PRO PHE ARG LEU PRO LEU VAL SEQRES 9 A 152 GLN LYS GLU TRP ARG THR CYS GLU GLU ASN VAL PHE GLY SEQRES 10 A 152 LEU TYR HIS VAL PHE GLU THR HIS TYR ALA GLY TYR PHE SEQRES 11 A 152 SER ASP LEU LEU ILE HIS ASP VAL GLU THR ASN PRO GLY SEQRES 12 A 152 GLY SER LYS HIS HIS HIS HIS HIS HIS SEQRES 1 B 152 SER PRO ASN PRO LEU ASP VAL SER LYS THR TYR PRO THR SEQRES 2 B 152 LEU HIS ILE LEU LEU GLN PHE ASN HIS ARG GLY LEU GLU SEQRES 3 B 152 ALA ARG ILE PHE ARG HIS GLY GLN LEU TRP ALA GLU THR SEQRES 4 B 152 HIS ALA GLU VAL VAL LEU ARG SER LYS THR LYS GLN ILE SEQRES 5 B 152 SER PHE LEU SER ASN GLY SER TYR PRO SER MET ASP ALA SEQRES 6 B 152 THR THR PRO LEU ASN PRO TRP LYS SER THR TYR GLN ALA SEQRES 7 B 152 VAL LEU ARG ALA GLU PRO HIS ARG VAL THR MET ASP VAL SEQRES 8 B 152 TYR HIS LYS ARG ILE ARG PRO PHE ARG LEU PRO LEU VAL SEQRES 9 B 152 GLN LYS GLU TRP ARG THR CYS GLU GLU ASN VAL PHE GLY SEQRES 10 B 152 LEU TYR HIS VAL PHE GLU THR HIS TYR ALA GLY TYR PHE SEQRES 11 B 152 SER ASP LEU LEU ILE HIS ASP VAL GLU THR ASN PRO GLY SEQRES 12 B 152 GLY SER LYS HIS HIS HIS HIS HIS HIS SEQRES 1 C 152 SER PRO ASN PRO LEU ASP VAL SER LYS THR TYR PRO THR SEQRES 2 C 152 LEU HIS ILE LEU LEU GLN PHE ASN HIS ARG GLY LEU GLU SEQRES 3 C 152 ALA ARG ILE PHE ARG HIS GLY GLN LEU TRP ALA GLU THR SEQRES 4 C 152 HIS ALA GLU VAL VAL LEU ARG SER LYS THR LYS GLN ILE SEQRES 5 C 152 SER PHE LEU SER ASN GLY SER TYR PRO SER MET ASP ALA SEQRES 6 C 152 THR THR PRO LEU ASN PRO TRP LYS SER THR TYR GLN ALA SEQRES 7 C 152 VAL LEU ARG ALA GLU PRO HIS ARG VAL THR MET ASP VAL SEQRES 8 C 152 TYR HIS LYS ARG ILE ARG PRO PHE ARG LEU PRO LEU VAL SEQRES 9 C 152 GLN LYS GLU TRP ARG THR CYS GLU GLU ASN VAL PHE GLY SEQRES 10 C 152 LEU TYR HIS VAL PHE GLU THR HIS TYR ALA GLY TYR PHE SEQRES 11 C 152 SER ASP LEU LEU ILE HIS ASP VAL GLU THR ASN PRO GLY SEQRES 12 C 152 GLY SER LYS HIS HIS HIS HIS HIS HIS SEQRES 1 D 152 SER PRO ASN PRO LEU ASP VAL SER LYS THR TYR PRO THR SEQRES 2 D 152 LEU HIS ILE LEU LEU GLN PHE ASN HIS ARG GLY LEU GLU SEQRES 3 D 152 ALA ARG ILE PHE ARG HIS GLY GLN LEU TRP ALA GLU THR SEQRES 4 D 152 HIS ALA GLU VAL VAL LEU ARG SER LYS THR LYS GLN ILE SEQRES 5 D 152 SER PHE LEU SER ASN GLY SER TYR PRO SER MET ASP ALA SEQRES 6 D 152 THR THR PRO LEU ASN PRO TRP LYS SER THR TYR GLN ALA SEQRES 7 D 152 VAL LEU ARG ALA GLU PRO HIS ARG VAL THR MET ASP VAL SEQRES 8 D 152 TYR HIS LYS ARG ILE ARG PRO PHE ARG LEU PRO LEU VAL SEQRES 9 D 152 GLN LYS GLU TRP ARG THR CYS GLU GLU ASN VAL PHE GLY SEQRES 10 D 152 LEU TYR HIS VAL PHE GLU THR HIS TYR ALA GLY TYR PHE SEQRES 11 D 152 SER ASP LEU LEU ILE HIS ASP VAL GLU THR ASN PRO GLY SEQRES 12 D 152 GLY SER LYS HIS HIS HIS HIS HIS HIS HET SO4 A1001 5 HET SO4 A1002 5 HET SO4 A1003 5 HET SO4 B1001 5 HET SO4 B1002 5 HET SO4 B1003 5 HET SO4 C1001 5 HET SO4 D1001 5 HET SO4 D1002 5 HETNAM SO4 SULFATE ION FORMUL 5 SO4 9(O4 S 2-) FORMUL 14 HOH *147(H2 O) HELIX 1 AA1 SER A 47 GLY A 58 1 12 HELIX 2 AA2 ASN A 114 TYR A 126 1 13 HELIX 3 AA3 SER B 47 GLY B 58 1 12 HELIX 4 AA4 ASN B 114 TYR B 126 1 13 HELIX 5 AA5 SER C 47 GLY C 58 1 12 HELIX 6 AA6 ASN C 114 TYR C 126 1 13 HELIX 7 AA7 SER D 47 GLY D 58 1 12 HELIX 8 AA8 ASN D 114 TYR D 126 1 13 SHEET 1 AA1 7 VAL A 104 TRP A 108 0 SHEET 2 AA1 7 VAL A 87 HIS A 93 -1 N VAL A 87 O TRP A 108 SHEET 3 AA1 7 LYS A 73 ALA A 82 -1 N GLN A 77 O TYR A 92 SHEET 4 AA1 7 THR A 13 ASN A 21 -1 N PHE A 20 O SER A 74 SHEET 5 AA1 7 GLY A 24 ARG A 31 -1 O PHE A 30 N HIS A 15 SHEET 6 AA1 7 GLN A 34 ALA A 41 -1 O ALA A 41 N LEU A 25 SHEET 7 AA1 7 LEU A 134 ILE A 135 -1 O LEU A 134 N GLU A 38 SHEET 1 AA2 7 VAL B 104 TRP B 108 0 SHEET 2 AA2 7 ARG B 86 HIS B 93 -1 N VAL B 91 O VAL B 104 SHEET 3 AA2 7 LYS B 73 GLU B 83 -1 N VAL B 79 O ASP B 90 SHEET 4 AA2 7 THR B 13 ASN B 21 -1 N ILE B 16 O ALA B 78 SHEET 5 AA2 7 GLY B 24 ARG B 31 -1 O GLU B 26 N GLN B 19 SHEET 6 AA2 7 GLN B 34 ALA B 41 -1 O ALA B 41 N LEU B 25 SHEET 7 AA2 7 LEU B 134 ILE B 135 -1 O LEU B 134 N GLU B 38 SHEET 1 AA3 7 VAL C 104 TRP C 108 0 SHEET 2 AA3 7 VAL C 87 HIS C 93 -1 N MET C 89 O LYS C 106 SHEET 3 AA3 7 LYS C 73 ALA C 82 -1 N VAL C 79 O ASP C 90 SHEET 4 AA3 7 THR C 13 ASN C 21 -1 N LEU C 18 O TYR C 76 SHEET 5 AA3 7 GLY C 24 ARG C 31 -1 O ARG C 28 N LEU C 17 SHEET 6 AA3 7 GLN C 34 ALA C 41 -1 O ALA C 41 N LEU C 25 SHEET 7 AA3 7 LEU C 133 ILE C 135 -1 O LEU C 134 N GLU C 38 SHEET 1 AA4 7 VAL D 104 TRP D 108 0 SHEET 2 AA4 7 VAL D 87 HIS D 93 -1 N VAL D 87 O TRP D 108 SHEET 3 AA4 7 LYS D 73 ALA D 82 -1 N VAL D 79 O ASP D 90 SHEET 4 AA4 7 THR D 13 ASN D 21 -1 N LEU D 18 O TYR D 76 SHEET 5 AA4 7 GLY D 24 ARG D 31 -1 O GLU D 26 N GLN D 19 SHEET 6 AA4 7 GLN D 34 ALA D 41 -1 O THR D 39 N ALA D 27 SHEET 7 AA4 7 LEU D 134 ILE D 135 -1 O LEU D 134 N GLU D 38 SSBOND 1 CYS A 111 CYS C 111 1555 1555 2.03 SSBOND 2 CYS B 111 CYS D 111 1555 1555 2.04 CRYST1 91.560 91.560 316.390 90.00 90.00 120.00 P 62 2 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010922 0.006306 0.000000 0.00000 SCALE2 0.000000 0.012611 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003161 0.00000 MTRIX1 1 -0.984987 -0.145098 0.093522 123.38886 1 MTRIX2 1 0.068652 -0.826329 -0.558987 -6.57599 1 MTRIX3 1 0.158388 -0.544175 0.823885 -5.95921 1 MTRIX1 2 -0.527034 0.823993 0.208015 99.07261 1 MTRIX2 2 0.822809 0.433500 0.367509 -65.75267 1 MTRIX3 2 0.212650 0.364847 -0.906458 34.78327 1