HEADER DE NOVO PROTEIN 24-JAN-21 7BO9 TITLE A HEXAMERIC DE NOVO COILED-COIL ASSEMBLY: CC-TYPE2-(VAYD)4-Y3F- TITLE 2 W19(BRPHE). COMPND MOL_ID: 1; COMPND 2 MOLECULE: CC-TYPE2-(VAYD)4-Y3F-W19(BRPHE); COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630 KEYWDS COILED COIL, SYNTHETIC PEPTIDE, HOMOMERIC ASSEMBLY, TYROSINE-TYROSINE KEYWDS 2 INTERACTIONS, DE NOVO PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR G.G.RHYS,R.L.BRADY,D.N.WOOLFSON REVDAT 1 19-MAY-21 7BO9 0 JRNL AUTH G.G.RHYS,W.M.DAWSON,J.L.BEESLEY,F.J.O.MARTIN,R.L.BRADY, JRNL AUTH 2 A.R.THOMSON,D.N.WOOLFSON JRNL TITL HOW COILED-COIL ASSEMBLIES ACCOMMODATE MULTIPLE AROMATIC JRNL TITL 2 RESIDUES. JRNL REF BIOMACROMOLECULES V. 22 2010 2021 JRNL REFN ESSN 1526-4602 JRNL PMID 33881308 JRNL DOI 10.1021/ACS.BIOMAC.1C00131 REMARK 2 REMARK 2 RESOLUTION. 1.56 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.56 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.08 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 21969 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1161 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.56 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.60 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1583 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.58 REMARK 3 BIN R VALUE (WORKING SET) : 0.3060 REMARK 3 BIN FREE R VALUE SET COUNT : 88 REMARK 3 BIN FREE R VALUE : 0.3320 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1411 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 146 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.21 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.69 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.59000 REMARK 3 B22 (A**2) : -1.45000 REMARK 3 B33 (A**2) : 3.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.095 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.102 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.082 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.870 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1480 ; 0.014 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 1429 ; 0.001 ; 0.018 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1947 ; 1.805 ; 1.667 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3309 ; 1.493 ; 1.615 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 171 ; 3.831 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 66 ;42.463 ;24.848 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 252 ;16.511 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 172 ; 0.089 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1606 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 298 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 30 REMARK 3 ORIGIN FOR THE GROUP (A): 27.2279 -4.3718 50.1412 REMARK 3 T TENSOR REMARK 3 T11: 0.0814 T22: 0.0996 REMARK 3 T33: 0.0439 T12: 0.0017 REMARK 3 T13: -0.0102 T23: 0.0020 REMARK 3 L TENSOR REMARK 3 L11: 3.1626 L22: 0.4226 REMARK 3 L33: 0.6850 L12: 0.1322 REMARK 3 L13: 1.2234 L23: 0.0120 REMARK 3 S TENSOR REMARK 3 S11: 0.0385 S12: -0.0047 S13: -0.2240 REMARK 3 S21: -0.0107 S22: 0.0116 S23: -0.0439 REMARK 3 S31: 0.0104 S32: 0.0076 S33: -0.0501 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 0 B 30 REMARK 3 ORIGIN FOR THE GROUP (A): 28.6401 6.6517 38.5788 REMARK 3 T TENSOR REMARK 3 T11: 0.1248 T22: 0.1112 REMARK 3 T33: 0.0452 T12: 0.0200 REMARK 3 T13: 0.0424 T23: 0.0132 REMARK 3 L TENSOR REMARK 3 L11: 3.9962 L22: 1.2259 REMARK 3 L33: 0.1158 L12: -1.1953 REMARK 3 L13: -0.2036 L23: 0.3541 REMARK 3 S TENSOR REMARK 3 S11: 0.1373 S12: 0.0930 S13: 0.0780 REMARK 3 S21: -0.3117 S22: -0.0874 S23: -0.1099 REMARK 3 S31: -0.1017 S32: -0.0168 S33: -0.0498 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 0 C 30 REMARK 3 ORIGIN FOR THE GROUP (A): 21.9641 2.2361 53.1859 REMARK 3 T TENSOR REMARK 3 T11: 0.0776 T22: 0.1001 REMARK 3 T33: 0.0536 T12: -0.0077 REMARK 3 T13: 0.0005 T23: 0.0012 REMARK 3 L TENSOR REMARK 3 L11: 5.1715 L22: 1.1979 REMARK 3 L33: 0.1623 L12: 1.6669 REMARK 3 L13: 0.4830 L23: 0.4301 REMARK 3 S TENSOR REMARK 3 S11: -0.0591 S12: -0.0848 S13: 0.0412 REMARK 3 S21: 0.0517 S22: 0.0266 S23: 0.0530 REMARK 3 S31: 0.0180 S32: 0.0090 S33: 0.0325 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 30 REMARK 3 ORIGIN FOR THE GROUP (A): 27.6943 -0.8740 36.8308 REMARK 3 T TENSOR REMARK 3 T11: 0.1538 T22: 0.1081 REMARK 3 T33: 0.0148 T12: -0.0006 REMARK 3 T13: 0.0069 T23: -0.0084 REMARK 3 L TENSOR REMARK 3 L11: 3.8655 L22: 2.1258 REMARK 3 L33: 0.8399 L12: -1.1235 REMARK 3 L13: 1.5103 L23: 0.2313 REMARK 3 S TENSOR REMARK 3 S11: 0.0232 S12: 0.1406 S13: -0.1987 REMARK 3 S21: -0.4426 S22: 0.0781 S23: -0.0087 REMARK 3 S31: -0.1540 S32: 0.1016 S33: -0.1013 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 0 E 29 REMARK 3 ORIGIN FOR THE GROUP (A): 22.1912 -7.0338 38.9230 REMARK 3 T TENSOR REMARK 3 T11: 0.1283 T22: 0.0849 REMARK 3 T33: 0.1139 T12: 0.0052 REMARK 3 T13: 0.0016 T23: -0.0268 REMARK 3 L TENSOR REMARK 3 L11: 3.2292 L22: 0.2804 REMARK 3 L33: 1.5649 L12: -0.0109 REMARK 3 L13: 2.0703 L23: 0.1747 REMARK 3 S TENSOR REMARK 3 S11: -0.0591 S12: 0.1572 S13: -0.1231 REMARK 3 S21: -0.1075 S22: 0.0021 S23: 0.0478 REMARK 3 S31: -0.0623 S32: 0.1002 S33: 0.0570 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 1 F 30 REMARK 3 ORIGIN FOR THE GROUP (A): 21.0711 8.5441 48.3326 REMARK 3 T TENSOR REMARK 3 T11: 0.1029 T22: 0.0971 REMARK 3 T33: 0.0411 T12: -0.0029 REMARK 3 T13: 0.0170 T23: -0.0048 REMARK 3 L TENSOR REMARK 3 L11: 3.0312 L22: 0.6013 REMARK 3 L33: 0.0354 L12: -0.1322 REMARK 3 L13: -0.1001 L23: -0.0993 REMARK 3 S TENSOR REMARK 3 S11: 0.0390 S12: -0.0520 S13: 0.0848 REMARK 3 S21: -0.0685 S22: -0.0185 S23: 0.0147 REMARK 3 S31: -0.0237 S32: 0.0032 S33: -0.0205 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 7BO9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-JAN-21. REMARK 100 THE DEPOSITION ID IS D_1292113348. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JAN-18 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91587 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS NOV 11, 2017 REMARK 200 DATA SCALING SOFTWARE : XSCALE NOV 11, 2017, XIA2 REMARK 200 0.5.482-G030776D9-DIALS-1.8 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23181 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.560 REMARK 200 RESOLUTION RANGE LOW (A) : 50.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 12.70 REMARK 200 R MERGE (I) : 0.10100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 6.98 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 50.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.9 REMARK 200 DATA REDUNDANCY IN SHELL : 10.00 REMARK 200 R MERGE FOR SHELL (I) : 0.06500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 31.20 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: CRANK2 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AFTER 1:1 DILUTION WITH THE PEPTIDE REMARK 280 SOLUTION, THE RESULTING CONDITIONS WERE 0.1 M SODIUM SULPHATE, REMARK 280 0.05 M BIS-TRIS PROPANE AND 20% W/V PEG 3350., PH 8.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.31500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 34.71500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 25.45000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 34.71500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.31500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 25.45000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ACE A 0 REMARK 465 NH2 A 31 REMARK 465 NH2 B 31 REMARK 465 ACE D 0 REMARK 465 NH2 D 31 REMARK 465 GLY E 30 REMARK 465 NH2 E 31 REMARK 465 ACE F 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O1 GOL A 101 O HOH A 201 2.03 REMARK 500 O HOH A 211 O HOH A 224 2.11 REMARK 500 C1 GOL A 101 O HOH A 201 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU D 16 CD GLU D 16 OE1 0.072 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TYR A 10 CB - CG - CD1 ANGL. DEV. = 3.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL DBREF 7BO9 A 0 31 PDB 7BO9 7BO9 0 31 DBREF 7BO9 B 0 31 PDB 7BO9 7BO9 0 31 DBREF 7BO9 C 0 31 PDB 7BO9 7BO9 0 31 DBREF 7BO9 D 0 31 PDB 7BO9 7BO9 0 31 DBREF 7BO9 E 0 31 PDB 7BO9 7BO9 0 31 DBREF 7BO9 F 0 31 PDB 7BO9 7BO9 0 31 SEQRES 1 A 32 ACE GLY GLU PHE ALA GLN ALA VAL LYS GLU TYR ALA LYS SEQRES 2 A 32 ALA VAL LYS GLU TYR ALA 4BF ALA VAL LYS GLU TYR ALA SEQRES 3 A 32 GLN ALA VAL LYS GLY NH2 SEQRES 1 B 32 ACE GLY GLU PHE ALA GLN ALA VAL LYS GLU TYR ALA LYS SEQRES 2 B 32 ALA VAL LYS GLU TYR ALA 4BF ALA VAL LYS GLU TYR ALA SEQRES 3 B 32 GLN ALA VAL LYS GLY NH2 SEQRES 1 C 32 ACE GLY GLU PHE ALA GLN ALA VAL LYS GLU TYR ALA LYS SEQRES 2 C 32 ALA VAL LYS GLU TYR ALA 4BF ALA VAL LYS GLU TYR ALA SEQRES 3 C 32 GLN ALA VAL LYS GLY NH2 SEQRES 1 D 32 ACE GLY GLU PHE ALA GLN ALA VAL LYS GLU TYR ALA LYS SEQRES 2 D 32 ALA VAL LYS GLU TYR ALA 4BF ALA VAL LYS GLU TYR ALA SEQRES 3 D 32 GLN ALA VAL LYS GLY NH2 SEQRES 1 E 32 ACE GLY GLU PHE ALA GLN ALA VAL LYS GLU TYR ALA LYS SEQRES 2 E 32 ALA VAL LYS GLU TYR ALA 4BF ALA VAL LYS GLU TYR ALA SEQRES 3 E 32 GLN ALA VAL LYS GLY NH2 SEQRES 1 F 32 ACE GLY GLU PHE ALA GLN ALA VAL LYS GLU TYR ALA LYS SEQRES 2 F 32 ALA VAL LYS GLU TYR ALA 4BF ALA VAL LYS GLU TYR ALA SEQRES 3 F 32 GLN ALA VAL LYS GLY NH2 HET 4BF A 19 12 HET ACE B 0 3 HET 4BF B 19 12 HET ACE C 0 3 HET 4BF C 19 12 HET NH2 C 31 1 HET 4BF D 19 12 HET ACE E 0 3 HET 4BF E 19 12 HET 4BF F 19 12 HET NH2 F 31 1 HET GOL A 101 6 HETNAM 4BF 4-BROMO-L-PHENYLALANINE HETNAM ACE ACETYL GROUP HETNAM NH2 AMINO GROUP HETNAM GOL GLYCEROL HETSYN 4BF P-BROMO-L-PHENYLALANINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 4BF 6(C9 H10 BR N O2) FORMUL 2 ACE 3(C2 H4 O) FORMUL 3 NH2 2(H2 N) FORMUL 7 GOL C3 H8 O3 FORMUL 8 HOH *146(H2 O) HELIX 1 AA1 GLY A 1 GLY A 30 1 30 HELIX 2 AA2 GLY B 1 GLY B 30 1 30 HELIX 3 AA3 GLY C 1 GLY C 30 1 30 HELIX 4 AA4 GLU D 2 GLY D 30 1 29 HELIX 5 AA5 GLY E 1 LYS E 29 1 29 HELIX 6 AA6 GLU F 2 LYS F 29 1 28 LINK C ALA A 18 N 4BF A 19 1555 1555 1.35 LINK C 4BF A 19 N ALA A 20 1555 1555 1.33 LINK C ACE B 0 N GLY B 1 1555 1555 1.37 LINK C ALA B 18 N 4BF B 19 1555 1555 1.38 LINK C 4BF B 19 N ALA B 20 1555 1555 1.37 LINK C ACE C 0 N GLY C 1 1555 1555 1.35 LINK C ALA C 18 N 4BF C 19 1555 1555 1.39 LINK C 4BF C 19 N ALA C 20 1555 1555 1.34 LINK C GLY C 30 N NH2 C 31 1555 1555 1.22 LINK C ALA D 18 N 4BF D 19 1555 1555 1.31 LINK C 4BF D 19 N ALA D 20 1555 1555 1.34 LINK C ACE E 0 N GLY E 1 1555 1555 1.36 LINK C ALA E 18 N 4BF E 19 1555 1555 1.28 LINK C 4BF E 19 N ALA E 20 1555 1555 1.38 LINK C ALA F 18 N 4BF F 19 1555 1555 1.34 LINK C 4BF F 19 N ALA F 20 1555 1555 1.35 LINK C GLY F 30 N NH2 F 31 1555 1555 1.27 CRYST1 44.630 50.900 69.430 90.00 90.00 90.00 P 21 21 21 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022406 0.000000 0.000000 0.00000 SCALE2 0.000000 0.019646 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014403 0.00000